meta_Run stringclasses 42 values | meta_Link stringclasses 1 value | meta_Author stringclasses 1 value | meta_Species stringclasses 1 value | meta_Age stringclasses 4 values | meta_BSource stringclasses 1 value | meta_BType stringclasses 4 values | meta_Vaccine stringclasses 0 values | meta_Disease stringclasses 2 values | meta_Subject stringclasses 4 values | meta_Longitudinal stringclasses 1 value | meta_Unique sequences int64 843 19.8k | meta_Isotype stringclasses 1 value | meta_Chain stringclasses 1 value | source_file stringclasses 42 values | sequence_id_heavy stringlengths 27 27 | sequence_heavy stringlengths 426 1.13k | locus_heavy stringclasses 1 value | stop_codon_heavy stringclasses 1 value | vj_in_frame_heavy stringclasses 1 value | v_frameshift_heavy stringclasses 1 value | productive_heavy stringclasses 1 value | rev_comp_heavy stringclasses 1 value | complete_vdj_heavy stringclasses 2 values | v_call_heavy stringclasses 226 values | d_call_heavy stringclasses 29 values | j_call_heavy stringclasses 13 values | sequence_alignment_heavy stringlengths 322 493 | germline_alignment_heavy stringlengths 322 493 | sequence_alignment_aa_heavy stringlengths 107 164 | germline_alignment_aa_heavy stringlengths 107 164 | v_alignment_start_heavy stringclasses 1 value | v_alignment_end_heavy stringclasses 77 values | d_alignment_start_heavy stringclasses 98 values | d_alignment_end_heavy stringclasses 103 values | j_alignment_start_heavy stringclasses 199 values | j_alignment_end_heavy stringclasses 205 values | v_sequence_alignment_heavy stringlengths 219 352 | v_sequence_alignment_aa_heavy stringlengths 73 117 | v_germline_alignment_heavy stringlengths 219 352 | v_germline_alignment_aa_heavy stringlengths 73 101 | d_sequence_alignment_heavy stringlengths 5 37 ⌀ | d_sequence_alignment_aa_heavy stringlengths 1 12 ⌀ | d_germline_alignment_heavy stringlengths 5 37 ⌀ | d_germline_alignment_aa_heavy stringlengths 1 12 ⌀ | j_sequence_alignment_heavy stringlengths 22 63 | j_sequence_alignment_aa_heavy stringlengths 7 20 | j_germline_alignment_heavy stringlengths 22 63 | j_germline_alignment_aa_heavy stringclasses 194 values | fwr1_heavy stringlengths 42 117 | fwr1_aa_heavy stringlengths 14 39 | cdr1_heavy stringlengths 3 72 | cdr1_aa_heavy stringlengths 1 24 | fwr2_heavy stringlengths 30 93 | fwr2_aa_heavy stringlengths 10 31 | cdr2_heavy stringlengths 4 81 | cdr2_aa_heavy stringlengths 1 27 | fwr3_heavy stringlengths 96 175 | fwr3_aa_heavy stringlengths 32 58 | fwr4_heavy stringlengths 21 36 | fwr4_aa_heavy stringlengths 7 12 | cdr3_heavy stringlengths 9 174 | cdr3_aa_heavy stringlengths 3 58 | junction_heavy stringlengths 15 180 | junction_length_heavy stringclasses 45 values | junction_aa_heavy stringlengths 5 60 | junction_aa_length_heavy stringclasses 45 values | v_score_heavy stringclasses 174 values | d_score_heavy stringclasses 33 values | j_score_heavy stringclasses 49 values | v_cigar_heavy stringlengths 10 30 | d_cigar_heavy stringlengths 10 20 ⌀ | j_cigar_heavy stringlengths 7 17 | v_support_heavy stringlengths 5 23 | d_support_heavy stringlengths 3 9 ⌀ | j_support_heavy stringlengths 5 22 | v_identity_heavy stringlengths 4 6 | d_identity_heavy stringclasses 96 values | j_identity_heavy stringclasses 227 values | v_sequence_start_heavy stringclasses 274 values | v_sequence_end_heavy stringclasses 297 values | v_germline_start_heavy stringclasses 23 values | v_germline_end_heavy stringclasses 31 values | d_sequence_start_heavy stringclasses 301 values | d_sequence_end_heavy stringclasses 310 values | d_germline_start_heavy stringclasses 33 values | d_germline_end_heavy stringclasses 37 values | j_sequence_start_heavy stringclasses 460 values | j_sequence_end_heavy stringclasses 459 values | j_germline_start_heavy stringclasses 60 values | j_germline_end_heavy stringclasses 53 values | fwr1_start_heavy stringclasses 274 values | fwr1_end_heavy stringclasses 272 values | cdr1_start_heavy stringclasses 272 values | cdr1_end_heavy stringclasses 276 values | fwr2_start_heavy stringclasses 276 values | fwr2_end_heavy stringclasses 276 values | cdr2_start_heavy stringclasses 424 values | cdr2_end_heavy stringclasses 428 values | fwr3_start_heavy stringclasses 274 values | fwr3_end_heavy stringclasses 275 values | fwr4_start_heavy stringclasses 309 values | fwr4_end_heavy stringclasses 308 values | cdr3_start_heavy stringclasses 275 values | cdr3_end_heavy stringclasses 309 values | np1_heavy stringlengths 1 90 ⌀ | np1_length_heavy stringclasses 121 values | np2_heavy stringlengths 1 146 ⌀ | np2_length_heavy stringclasses 76 values | c_region_heavy stringlengths 1 490 ⌀ | Isotype_heavy stringclasses 6 values | Redundancy_heavy stringclasses 1 value | ANARCI_numbering_heavy stringlengths 848 2.11k | ANARCI_status_heavy stringclasses 451 values | sequence_id_light stringlengths 27 27 | sequence_light stringlengths 389 1.33k | locus_light stringclasses 3 values | stop_codon_light stringclasses 1 value | vj_in_frame_light stringclasses 1 value | v_frameshift_light stringclasses 1 value | productive_light stringclasses 1 value | rev_comp_light stringclasses 2 values | complete_vdj_light stringclasses 2 values | v_call_light stringclasses 122 values | d_call_light stringclasses 2 values | j_call_light stringclasses 16 values | sequence_alignment_light stringlengths 296 378 | germline_alignment_light stringlengths 296 378 | sequence_alignment_aa_light stringlengths 98 126 | germline_alignment_aa_light stringlengths 98 126 | v_alignment_start_light stringclasses 1 value | v_alignment_end_light stringclasses 65 values | d_alignment_start_light stringclasses 2 values | d_alignment_end_light stringclasses 2 values | j_alignment_start_light stringclasses 113 values | j_alignment_end_light stringclasses 121 values | v_sequence_alignment_light stringlengths 261 338 | v_sequence_alignment_aa_light stringlengths 86 112 | v_germline_alignment_light stringlengths 261 338 | v_germline_alignment_aa_light stringlengths 87 106 | d_sequence_alignment_light stringclasses 2 values | d_sequence_alignment_aa_light stringclasses 2 values | d_germline_alignment_light stringclasses 2 values | d_germline_alignment_aa_light stringclasses 2 values | j_sequence_alignment_light stringlengths 7 58 | j_sequence_alignment_aa_light stringlengths 2 19 | j_germline_alignment_light stringclasses 710 values | j_germline_alignment_aa_light stringclasses 146 values | fwr1_light stringlengths 60 108 | fwr1_aa_light stringlengths 20 36 | cdr1_light stringlengths 6 66 | cdr1_aa_light stringlengths 2 22 | fwr2_light stringlengths 43 78 | fwr2_aa_light stringlengths 14 26 | cdr2_light stringlengths 1 42 ⌀ | cdr2_aa_light stringlengths 2 14 ⌀ | fwr3_light stringlengths 87 159 | fwr3_aa_light stringlengths 29 53 | fwr4_light stringlengths 13 33 ⌀ | fwr4_aa_light stringlengths 4 11 ⌀ | cdr3_light stringlengths 12 69 | cdr3_aa_light stringlengths 4 23 | junction_light stringlengths 18 75 | junction_length_light stringclasses 19 values | junction_aa_light stringlengths 6 25 | junction_aa_length_light stringclasses 19 values | v_score_light stringclasses 164 values | d_score_light stringclasses 2 values | j_score_light stringclasses 31 values | v_cigar_light stringlengths 10 25 | d_cigar_light stringclasses 2 values | j_cigar_light stringlengths 7 16 | v_support_light stringlengths 5 23 | d_support_light stringclasses 2 values | j_support_light stringlengths 5 9 | v_identity_light stringlengths 4 6 | d_identity_light stringclasses 1 value | j_identity_light stringclasses 87 values | v_sequence_start_light stringclasses 300 values | v_sequence_end_light stringclasses 321 values | v_germline_start_light stringclasses 13 values | v_germline_end_light stringclasses 56 values | d_sequence_start_light stringclasses 2 values | d_sequence_end_light stringclasses 2 values | d_germline_start_light stringclasses 2 values | d_germline_end_light stringclasses 2 values | j_sequence_start_light stringclasses 453 values | j_sequence_end_light stringclasses 453 values | j_germline_start_light stringclasses 20 values | j_germline_end_light stringclasses 37 values | fwr1_start_light stringclasses 300 values | fwr1_end_light stringclasses 300 values | cdr1_start_light stringclasses 300 values | cdr1_end_light stringclasses 301 values | fwr2_start_light stringclasses 301 values | fwr2_end_light stringclasses 301 values | cdr2_start_light stringclasses 475 values | cdr2_end_light stringclasses 473 values | fwr3_start_light stringclasses 300 values | fwr3_end_light stringclasses 300 values | fwr4_start_light stringclasses 311 values | fwr4_end_light stringclasses 313 values | cdr3_start_light stringclasses 300 values | cdr3_end_light stringclasses 311 values | np1_light stringlengths 1 44 ⌀ | np1_length_light stringclasses 70 values | np2_light stringclasses 2 values | np2_length_light stringclasses 2 values | c_region_light stringlengths 1 516 ⌀ | Isotype_light stringclasses 2 values | Redundancy_light stringclasses 1 value | ANARCI_numbering_light stringlengths 920 1.61k | ANARCI_status_light stringclasses 128 values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCAGGTGTGGT-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGGGCATATAGTGGCTACGAGTTCCCGGGCCGGGCGAGGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD5-12*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGGGCATATAGTGGCTACGAGTTCCCGGGCCGGGCGAGGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGNNNATATAGTGGCTACGANNNNNNNNNNNNNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTGHIVATSSRAGRGYYFDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXIVATXXXXXXXXYFDYWGQGTLVTVSS | 1 | 301 | 305.0 | 319.0 | 341 | 388 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | ATATAGTGGCTACGA | IVAT | ATATAGTGGCTACGA | IVAT | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACCACAGGGCATATAGTGGCTACGAGTTCCCGGGCCGGGCGAGGGTACTACTTTGACTAC | TTGHIVATSSRAGRGYYFDY | TGTACCACAGGGCATATAGTGGCTACGAGTTCCCGGGCCGGGCGAGGGTACTACTTTGACTACTGG | 66.0 | CTTGHIVATSSRAGRGYYFDYW | 22.0 | 470.828 | 29.528 | 92.976 | 137S301M158S1N | 441S4N15M140S4N | 477S48M71S | 1.281e-134 | 0.0003453 | 5.962e-23 | 100.0 | 100.0 | 100.0 | 138 | 438 | 1 | 301 | 442.0 | 456.0 | 5.0 | 19.0 | 478 | 525 | 1 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 492.0 | 524.0 | 432.0 | 491.0 | GGC | 3 | GTTCCCGGGCCGGGCGAGGGT | 21.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'G', '108 ': 'H', '109 ': 'I', '110 ': 'V', '111 ': 'A', '111A': 'T', '111B': 'S', '111C': 'S', '112D': 'R', '112C': 'A', '112B': 'G', '112A': 'R', '112 ': 'G', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCAGGTGTGGT-1_contig_1 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCCGGGGGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ2*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCCGGGGGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCNNNNNNGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPRGYTFGQGTKLEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPXXYTFGQGTKLEIK | 1 | 284 | null | null | 291 | 328 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGCGTAGCAACTGGCCCCGGGGGTACACT | QQRSNWPRGYT | TGTCAGCAGCGTAGCAACTGGCCCCGGGGGTACACTTTT | 39.0 | CQQRSNWPRGYTF | 13.0 | 444.34 | null | 73.749 | 107S284M180S3N | null | 397S1N38M136S | 1.159e-126 | null | 3.502e-17 | 100.0 | null | 100.0 | 108 | 391 | 1 | 284 | null | null | null | null | 398 | 435 | 2 | 39 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | CCGGGG | 6 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '110 ': 'W', '113 ': 'P', '114 ': 'R', '115 ': 'G', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCAGTCTTGCA-1_contig_2 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCGCATGACTACGCCCCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD4-17*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCGCATGACTACGCCCCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGANNNNNTGACTACGNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARSHDYAPFDYWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXDYXXFDYWGQGTLVTVSS | 1 | 297 | 303.0 | 310.0 | 316 | 358 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TGACTACG | DY | TGACTACG | DY | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGATCGCATGACTACGCCCCATTTGACTAC | ARSHDYAPFDY | TGTGCGAGATCGCATGACTACGCCCCATTTGACTACTGG | 39.0 | CARSHDYAPFDYW | 13.0 | 464.595 | 16.069 | 83.363 | 92S297M132S2N | 394S8M119S8N | 407S5N43M71S | 8.41e-133 | 3.39 | 4.072e-20 | 100.0 | 100.0 | 100.0 | 93 | 389 | 1 | 297 | 395.0 | 402.0 | 1.0 | 8.0 | 408 | 450 | 6 | 48 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 417.0 | 449.0 | 384.0 | 416.0 | TCGCA | 5 | CCCCA | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'H', '109 ': 'D', '110 ': 'Y', '113 ': 'A', '114 ': 'P', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCAGTCTTGCA-1_contig_1 | ACTGCGGGGGTAAGAGGTTGTGTCCACCATGGCCTGGACTCCTCTCCTCCTCCTGTTCCTCTCTCACTGCACAGGTTCCCTCTCGCAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTACGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGTATGATTTGGCACAGCAGCGCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV5-45*02 | null | IGLJ3*02 | CAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTACGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGTATGATTTGGCACAGCAGCGCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTACGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGTATGATTTGGCACAGCAGCGCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QAVLTQPSSLSASPGASASLTCTLRSGINVGTYRIYWYQQKPGSPPQYLLRYKSDSDKQQGSGVPSRFSGSKDASANAGILLISGLQSEDEADYYCMIWHSSAWVFGGGTKLTVL | QAVLTQPSSLSASPGASASLTCTLRSGINVGTYRIYWYQQKPGSPPQYLLRYKSDSDKQQGSGVPSRFSGSKDASANAGILLISGLQSEDEADYYCMIWHSSAWVFGGGTKLTVL | 1 | 310 | null | null | 311 | 346 | CAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTACGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGTATGATTTGGCACAGCAGCGCTT | QAVLTQPSSLSASPGASASLTCTLRSGINVGTYRIYWYQQKPGSPPQYLLRYKSDSDKQQGSGVPSRFSGSKDASANAGILLISGLQSEDEADYYCMIWHSSA | CAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTACGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGTATGATTTGGCACAGCAGCGCTT | QAVLTQPSSLSASPGASASLTCTLRSGINVGTYRIYWYQQKPGSPPQYLLRYKSDSDKQQGSGVPSRFSGSKDASANAGILLISGLQSEDEADYYCMIWHSSA | null | null | null | null | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGGCTGTGCTGACTCAGCCGTCTTCCCTCTCTGCATCTCCTGGAGCATCAGCCAGTCTCACCTGCACCTTACGC | QAVLTQPSSLSASPGASASLTCTLR | AGTGGCATCAATGTTGGTACCTACAGG | SGINVGTYR | ATATACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCAGTATCTCCTGAGG | IYWYQQKPGSPPQYLLR | TACAAATCAGACTCAGATAAG | YKSDSDK | CAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCGGCCAATGCAGGGATTTTACTCATCTCTGGGCTCCAGTCTGAGGATGAGGCTGACTATTACTGT | QQGSGVPSRFSGSKDASANAGILLISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | ATGATTTGGCACAGCAGCGCTTGGGTG | MIWHSSAWV | TGTATGATTTGGCACAGCAGCGCTTGGGTGTTC | 33.0 | CMIWHSSAWVF | 11.0 | 484.851 | null | 69.904 | 85S310M247S2N | null | 395S2N36M211S | 8.321999999999999e-139 | null | 5.672e-16 | 100.0 | null | 100.0 | 86 | 395 | 1 | 310 | null | null | null | null | 396 | 431 | 3 | 38 | 86 | 160 | 161 | 187 | 188 | 238 | 239 | 259 | 260 | 373 | 401.0 | 430.0 | 374.0 | 400.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'A', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'S', '9 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'A', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'L', '26 ': 'R'}, 'cdrl1': {'27 ': 'S', '28 ': 'G', '29 ': 'I', '30 ': 'N', '31 ': 'V', '35 ': 'G', '36 ': 'T', '37 ': 'Y', '38 ': 'R'}, 'fwl2': {'39 ': 'I', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'S', '49 ': 'P', '50 ': 'P', '51 ': 'Q', '52 ': 'Y', '53 ': 'L', '54 ': 'L', '55 ': 'R'}, 'cdrl2': {'56 ': 'Y', '57 ': 'K', '58 ': 'S', '59 ': 'D', '63 ': 'S', '64 ': 'D', '65 ': 'K'}, 'fwl3': {'66 ': 'Q', '67 ': 'Q', '68 ': 'G', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '81 ': 'D', '82 ': 'A', '83 ': 'S', '84 ': 'A', '85 ': 'N', '86 ': 'A', '87 ': 'G', '88 ': 'I', '89 ': 'L', '90 ': 'L', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'M', '106 ': 'I', '107 ': 'W', '108 ': 'H', '109 ': 'S', '114 ': 'S', '115 ': 'A', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCAGTTGTAGA-1_contig_2 | TTATCTGGGAGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAAGTATTACGATATTTTGACTGGTTACGACACTTCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*02 | IGHD3-9*01 | IGHJ4*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAAGTATTACGATATTTTGACTGGTTACGACACTTCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACANGTATTACGATATTTTGACTGGTTANNNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHKYYDILTGYDTSFDYWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHXYYDILTGXXXXFDYWGQGTLVTVSS | 1 | 298 | 300.0 | 323.0 | 334 | 376 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | GTATTACGATATTTTGACTGGTTA | YYDILTG | GTATTACGATATTTTGACTGGTTA | YYDILTG | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGGATGATGATAAG | IYWDDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACAAGTATTACGATATTTTGACTGGTTACGACACTTCTTTTGACTAC | AHKYYDILTGYDTSFDY | TGTGCACACAAGTATTACGATATTTTGACTGGTTACGACACTTCTTTTGACTACTGG | 57.0 | CAHKYYDILTGYDTSFDYW | 19.0 | 466.153 | 46.832 | 83.363 | 86S298M149S3N | 385S24M124S7N | 419S5N43M71S | 2.925e-133 | 1.904e-09 | 4.167e-20 | 100.0 | 100.0 | 100.0 | 87 | 384 | 1 | 298 | 386.0 | 409.0 | 1.0 | 24.0 | 420 | 462 | 6 | 48 | 87 | 161 | 162 | 191 | 192 | 242 | 243 | 263 | 264 | 377 | 429.0 | 461.0 | 378.0 | 428.0 | A | 1 | CGACACTTCT | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'D', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'K', '108 ': 'Y', '109 ': 'Y', '110 ': 'D', '111 ': 'I', '111A': 'L', '111B': 'T', '112B': 'G', '112A': 'Y', '112 ': 'D', '113 ': 'T', '114 ': 'S', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCAGTTGTAGA-1_contig_1 | AGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGTCTACGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ1*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGTCTACGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWSTWTFGQGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPXWTFGQGTKVEIK | 1 | 285 | null | null | 288 | 325 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGTCT | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWS | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCT | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATAATAACTGGTCTACGTGGACG | QQYNNWSTWT | TGTCAGCAGTATAATAACTGGTCTACGTGGACGTTC | 36.0 | CQQYNNWSTWTF | 12.0 | 442.782 | null | 73.749 | 104S285M176S2N | null | 391S38M136S | 3.376e-126 | null | 3.465e-17 | 99.649 | null | 100.0 | 105 | 389 | 1 | 285 | null | null | null | null | 392 | 429 | 1 | 38 | 105 | 182 | 183 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | AC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '113 ': 'W', '114 ': 'S', '115 ': 'T', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCCAAACGTGG-1_contig_1 | AGCTCTCAGAGAGGTGCCTTAGCCCTGGATTCCAAGGCATTTCCACTTGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGGGCGAGGATATTGTACTAATGGTGTATGCTACCCAGTAGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-48*02 | IGHD2-8*01 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGGGCGAGGATATTGTACTAATGGTGTATGCTACCCAGTAGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNAGGATATTGTACTAATGGTGTATGCTANNNNNNNNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARGRGYCTNGVCYPVGAFDIWGQGTMVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARXXGYCTNGVCXXXXAFDIWGQGTMVTVSS | 1 | 295 | 300.0 | 326.0 | 336 | 382 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCAR | AGGATATTGTACTAATGGTGTATGCTA | GYCTNGVC | AGGATATTGTACTAATGGTGTATGCTA | GYCTNGVC | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MNWVRQAPGKGLEWVSY | ATTAGTAGTAGTAGTAGTACCATA | ISSSSSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGGGCGAGGATATTGTACTAATGGTGTATGCTACCCAGTAGGTGCTTTTGATATC | ARGRGYCTNGVCYPVGAFDI | TGTGCGAGAGGGCGAGGATATTGTACTAATGGTGTATGCTACCCAGTAGGTGCTTTTGATATCTGG | 66.0 | CARGRGYCTNGVCYPVGAFDIW | 22.0 | 461.479 | 52.6 | 91.054 | 136S295M158S1N | 435S27M127S4N | 471S3N47M71S | 8.252000000000001e-132 | 3.868e-11 | 2.233e-22 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 436.0 | 462.0 | 1.0 | 27.0 | 472 | 518 | 4 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 485.0 | 517.0 | 425.0 | 484.0 | GGCG | 4 | CCCAGTAGG | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'D', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'R', '109 ': 'G', '110 ': 'Y', '111 ': 'C', '111A': 'T', '111B': 'N', '111C': 'G', '112D': 'V', '112C': 'C', '112B': 'Y', '112A': 'P', '112 ': 'V', '113 ': 'G', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCCAAACGTGG-1_contig_2 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYYTFGQGTKLEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYYTFGQGTKLEIK | 1 | 283 | null | null | 284 | 319 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | null | null | null | null | ACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATAATAGTTATTACACT | QQYNSYYT | TGCCAACAGTATAATAGTTATTACACTTTT | 30.0 | CQQYNSYYTF | 10.0 | 442.782 | null | 69.904 | 93S283M172S4N | null | 376S3N36M136S | 3.269e-126 | null | 4.827e-16 | 100.0 | null | 100.0 | 94 | 376 | 1 | 283 | null | null | null | null | 377 | 412 | 4 | 39 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 382.0 | 411.0 | 358.0 | 381.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '114 ': 'S', '115 ': 'Y', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCCAACACCCG-1_contig_1 | TGGGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGCGAGTATAGCAGCTCGTCCGAATCTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD6-6*01 | IGHJ3*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGCGAGTATAGCAGCTCGTCCGAATCTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGNGAGTATAGCAGCTCGTCCNNNNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASEYSSSSESAFDIWGQGTMVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXEYSSSSXXAFDIWGQGTMVTVSS | 1 | 296 | 298.0 | 315.0 | 321 | 367 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | GAGTATAGCAGCTCGTCC | EYSSSS | GAGTATAGCAGCTCGTCC | EYSSSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGCGAGTATAGCAGCTCGTCCGAATCTGCTTTTGATATC | ASEYSSSSESAFDI | TGTGCGAGCGAGTATAGCAGCTCGTCCGAATCTGCTTTTGATATCTGG | 48.0 | CASEYSSSSESAFDIW | 16.0 | 463.037 | 35.296 | 91.054 | 97S296M142S3N | 394S18M123S | 417S3N47M71S | 2.547e-132 | 5.676e-06 | 2.0249999999999998e-22 | 100.0 | 100.0 | 100.0 | 98 | 393 | 1 | 296 | 395.0 | 412.0 | 1.0 | 18.0 | 418 | 464 | 4 | 50 | 98 | 172 | 173 | 202 | 203 | 253 | 254 | 274 | 275 | 388 | 431.0 | 463.0 | 389.0 | 430.0 | C | 1 | GAATC | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'E', '108 ': 'Y', '109 ': 'S', '110 ': 'S', '111 ': 'S', '112A': 'S', '112 ': 'E', '113 ': 'S', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCCAACACCCG-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCCGGGCCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCCGGGCCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCNNNNNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTPGHVVFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTXXXVVFGGGTKLTVL | 1 | 295 | null | null | 303 | 340 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTC | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSST | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTC | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSST | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATACAAGCAGCAGCACTCCGGGCCATGTGGTA | SSYTSSSTPGHVV | TGCAGCTCATATACAAGCAGCAGCACTCCGGGCCATGTGGTATTC | 45.0 | CSSYTSSSTPGHVVF | 15.0 | 461.479 | null | 73.749 | 98S295M256S2N | null | 400S38M211S | 9.136e-132 | null | 3.99e-17 | 100.0 | null | 100.0 | 99 | 393 | 1 | 295 | null | null | null | null | 401 | 438 | 1 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 408.0 | 437.0 | 369.0 | 407.0 | CGGGCCA | 7 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '110 ': 'S', '111 ': 'S', '112 ': 'T', '113 ': 'P', '114 ': 'G', '115 ': 'H', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCCAAGTAATG-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATCTGGGGAGATATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD7-27*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATCTGGGGAGATATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANCTGGGGANNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDLGRYDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXLGXXDYWGQGTLVTVSS | 1 | 296 | 298.0 | 304.0 | 309 | 349 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CTGGGGA | LG | CTGGGGA | LG | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCTGGGGAGATATGACTAC | ARDLGRYDY | TGTGCGAGAGATCTGGGGAGATATGACTACTGG | 33.0 | CARDLGRYDYW | 11.0 | 463.037 | 14.146 | 79.518 | 121S296M124S | 418S4N7M116S | 429S7N41M71S | 2.5770000000000002e-132 | 13.35 | 6.082e-19 | 100.0 | 100.0 | 100.0 | 122 | 417 | 1 | 296 | 419.0 | 425.0 | 5.0 | 11.0 | 430 | 470 | 8 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 437.0 | 469.0 | 410.0 | 436.0 | T | 1 | GATA | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'G', '114 ': 'R', '115 ': 'Y', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCCAAGTAATG-1_contig_1 | GAGCCCCTGACTGCTGATTTGCATCACGGGCCACTCTTTCCAGCAAGGGGATAAGAGAGGCCTGGAAGAACCTGCCCAGCCTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | 1 | 283 | null | null | 284 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTGTGGTA | QAWDSSTVV | TGTCAGGCGTGGGACAGCAGCACTGTGGTATTC | 33.0 | CQAWDSSTVVF | 11.0 | 442.782 | null | 69.904 | 174S283M247S2N | null | 457S2N36M211S | 4.228e-126 | null | 6.229e-16 | 100.0 | null | 100.0 | 175 | 457 | 1 | 283 | null | null | null | null | 458 | 493 | 3 | 38 | 175 | 249 | 250 | 267 | 268 | 318 | 319 | 327 | 328 | 435 | 463.0 | 492.0 | 436.0 | 462.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCCAGAGTGTG-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACATAGATACGGGAGTATAGCGGAGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD6-6*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACATAGATACGGGAGTATAGCGGAGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGANNNNNNNNNNNGAGTATAGCNNNNTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARHRYGSIAEYFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXSIAXYFDYWGQGTLVTVSS | 1 | 291 | 303.0 | 311.0 | 316 | 361 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GAGTATAGC | SIA | GAGTATAGC | SIA | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGACATAGATACGGGAGTATAGCGGAGTACTTTGACTAC | ARHRYGSIAEYFDY | TGTGCGAGACATAGATACGGGAGTATAGCGGAGTACTTTGACTACTGG | 48.0 | CARHRYGSIAEYFDYW | 16.0 | 455.247 | 17.992 | 89.131 | 92S291M141S2N | 394S9M121S9N | 407S2N46M71S | 5.516e-130 | 0.8994 | 7.515999999999999e-22 | 100.0 | 100.0 | 100.0 | 93 | 383 | 1 | 291 | 395.0 | 403.0 | 1.0 | 9.0 | 408 | 453 | 3 | 48 | 93 | 167 | 168 | 191 | 192 | 242 | 243 | 263 | 264 | 377 | 420.0 | 452.0 | 378.0 | 419.0 | CATAGATACGG | 11 | GGAG | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'H', '108 ': 'R', '109 ': 'Y', '110 ': 'G', '111 ': 'S', '112A': 'I', '112 ': 'A', '113 ': 'E', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCCAGAGTGTG-1_contig_2 | GGGGAGAAGTCTCTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-27*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPLTFGPGTKVDIK | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPLTFGPGTKVDIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAP | null | null | null | null | TCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | TCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGCAATTAT | QGISNY | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTAT | LAWYQQKPGKVPKLLIY | GCTGCATCC | AAS | ACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAAAAGTATAACAGTGCCCCTCTCACT | QKYNSAPLT | TGTCAAAAGTATAACAGTGCCCCTCTCACTTTC | 33.0 | CQKYNSAPLTF | 11.0 | 447.456 | null | 69.904 | 97S286M172S1N | null | 383S2N36M136S | 1.2979999999999998e-127 | null | 4.89e-16 | 100.0 | null | 100.0 | 98 | 383 | 1 | 286 | null | null | null | null | 384 | 419 | 3 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'V', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'K', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'A', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCCATGACGGA-1_contig_2 | TTTGGGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACGGCGCCTTGGAGTTTACGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD3-3*01 | IGHJ3*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACGGCGCCTTGGAGTTTACGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACNNNNNNTTGGAGTNNNNGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARRRLGVYDAFDIWGQGTMVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXGVXDAFDIWGQGTMVTVSS | 1 | 298 | 305.0 | 311.0 | 316 | 364 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TTGGAGT | GV | TTGGAGT | GV | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGACGGCGCCTTGGAGTTTACGATGCTTTTGATATC | ARRRLGVYDAFDI | TGTGCGAGACGGCGCCTTGGAGTTTACGATGCTTTTGATATCTGG | 45.0 | CARRRLGVYDAFDIW | 15.0 | 466.153 | 14.146 | 94.899 | 99S298M137S1N | 403S12N7M124S12N | 414S1N49M71S | 2.931e-133 | 13.18 | 1.406e-23 | 100.0 | 100.0 | 100.0 | 100 | 397 | 1 | 298 | 404.0 | 410.0 | 13.0 | 19.0 | 415 | 463 | 2 | 50 | 100 | 174 | 175 | 204 | 205 | 255 | 256 | 276 | 277 | 390 | 430.0 | 462.0 | 391.0 | 429.0 | GGCGCC | 6 | TTAC | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'R', '109 ': 'L', '110 ': 'G', '111 ': 'V', '112 ': 'Y', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCCATGACGGA-1_contig_1 | CCTGGGTCAGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCCCTCGTAACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCCCTCGTAACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCNNNNNNNACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSLVTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSXXTFGQGTKLEIK | 1 | 284 | null | null | 292 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | null | null | null | null | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCTCCCTCGTAACT | QQYGSSLVT | TGTCAGCAGTATGGTAGCTCCCTCGTAACTTTT | 33.0 | CQQYGSSLVTF | 11.0 | 444.34 | null | 66.059 | 112S284M177S6N | null | 403S5N34M136S | 1.157e-126 | null | 7.261e-15 | 100.0 | null | 100.0 | 113 | 396 | 1 | 284 | null | null | null | null | 404 | 437 | 6 | 39 | 113 | 190 | 191 | 211 | 212 | 262 | 263 | 271 | 272 | 379 | 407.0 | 436.0 | 380.0 | 406.0 | CCTCGTA | 7 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'L', '116 ': 'V', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCGTAGGCTGA-1_contig_1 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACCGCCCGGGAAGCAGCTGGTATTTCCCACATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | IGHD6-13*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACCGCCCGGGAAGCAGCTGGTATTTCCCACATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNAGCAGCTGGTANNNNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDRPGSSWYFPHDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXXXSSWXXXXDYWGQGTLVTVSS | 1 | 296 | 307.0 | 317.0 | 327 | 367 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | AGCAGCTGGTA | SSW | AGCAGCTGGTA | SSW | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGACCGCCCGGGAAGCAGCTGGTATTTCCCACATGACTAC | ARDRPGSSWYFPHDY | TGTGCGAGAGACCGCCCGGGAAGCAGCTGGTATTTCCCACATGACTACTGG | 51.0 | CARDRPGSSWYFPHDYW | 17.0 | 463.037 | 21.837 | 79.518 | 121S296M142S | 427S9N11M121S1N | 447S7N41M71S | 2.6670000000000002e-132 | 0.06683 | 6.289e-19 | 100.0 | 100.0 | 100.0 | 122 | 417 | 1 | 296 | 428.0 | 438.0 | 10.0 | 20.0 | 448 | 488 | 8 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 455.0 | 487.0 | 410.0 | 454.0 | CCGCCCGGGA | 10 | TTTCCCACA | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'R', '109 ': 'P', '110 ': 'G', '111 ': 'S', '111A': 'S', '112A': 'W', '112 ': 'Y', '113 ': 'F', '114 ': 'P', '115 ': 'H', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCGTAGGCTGA-1_contig_2 | CTTGACTCTGCTGATTTGCATCACAGGCTGCTCTCTTCAGCAAGGGGATAAGAGAGGGCTGGAAGGAACCTGCCCAGCCTGGGCCTCAGGAAGCAGCATCGGGGGTGCCGCAGCCATGGCCTGGACCGCTCTCCTTCTGAGCCTCCTTGCTCACTTTACAGGTTCTGTGGCCTCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAAAGGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-9*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAAAGGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCANNNNGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSKGVFGGGTKLTVL | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSXXVFGGGTKLTVL | 1 | 277 | null | null | 282 | 316 | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCA | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDS | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCA | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDS | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYELTQPLSVSVALGQTARITCGGN | AACATTGGAAGTAAAAAT | NIGSKN | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTAT | VHWYQQKPGQAPVLVIY | AGGGATAGC | RDS | AACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGT | NRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGACAGCAAAGGGGTA | QVWDSKGV | TGTCAGGTGTGGGACAGCAAAGGGGTATTC | 30.0 | CQVWDSKGVF | 10.0 | 433.433 | null | 67.981 | 172S277M250S8N | null | 453S3N35M211S | 2.736e-123 | null | 2.345e-15 | 100.0 | null | 100.0 | 173 | 449 | 1 | 277 | null | null | null | null | 454 | 488 | 4 | 38 | 173 | 247 | 248 | 265 | 266 | 316 | 317 | 325 | 326 | 433 | 458.0 | 487.0 | 434.0 | 457.0 | AAGG | 4 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'L', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'N'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'A', '95 ': 'Q', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '114 ': 'S', '115 ': 'K', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCGTCACACGC-1_contig_2 | ACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCTCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGTCCCCTACTTACGATTTTTGGAGTGCAGGGCGAGAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-4*02 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGTCCCCTACTTACGATTTTTGGAGTGCAGGGCGAGAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNNNNTTACGATTTTTGGAGTGNNNNNNNNNNNNACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARGSPTYDFWSAGREDGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARXXXXYDFWSXXXXXGMDVWGQGTTVTVSS | 1 | 295 | 306.0 | 322.0 | 335 | 381 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAR | TTACGATTTTTGGAGTG | YDFWS | TTACGATTTTTGGAGTG | YDFWS | ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCT | QVQLQESGPGLVKPSGTLSLTCAVS | GGTGGCTCCATCAGCAGTAGTAACTGG | GGSISSSNW | TGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWVRQPPGKGLEWIGE | ATCTATCATAGTGGGAGCACC | IYHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGGGTCCCCTACTTACGATTTTTGGAGTGCAGGGCGAGAGGACGGTATGGACGTC | ARGSPTYDFWSAGREDGMDV | TGTGCGAGAGGGTCCCCTACTTACGATTTTTGGAGTGCAGGGCGAGAGGACGGTATGGACGTCTGG | 66.0 | CARGSPTYDFWSAGREDGMDVW | 22.0 | 461.479 | 33.373 | 91.054 | 103S295M158S1N | 408S3N17M131S11N | 437S15N47M72S | 7.810000000000001e-132 | 2.238e-05 | 2.1059999999999998e-22 | 100.0 | 100.0 | 100.0 | 104 | 398 | 1 | 295 | 409.0 | 425.0 | 4.0 | 20.0 | 438 | 484 | 16 | 62 | 104 | 178 | 179 | 205 | 206 | 256 | 257 | 277 | 278 | 391 | 452.0 | 484.0 | 392.0 | 451.0 | GGTCCCCTAC | 10 | CAGGGCGAGAGG | 12.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'G', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'W'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'K', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'S', '109 ': 'P', '110 ': 'T', '111 ': 'Y', '111A': 'D', '111B': 'F', '111C': 'W', '112D': 'S', '112C': 'A', '112B': 'G', '112A': 'R', '112 ': 'E', '113 ': 'D', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCGTCACACGC-1_contig_1 | AGGCTGGTCACACTTTGTGCAGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATNNGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPYTFGQGTKLEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYXYTFGQGTKLEIK | 1 | 282 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTAT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTAT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATAATAGTTATCCGTACACT | QQYNSYPYT | TGCCAACAGTATAATAGTTATCCGTACACTTTT | 33.0 | CQQYNSYPYTF | 11.0 | 441.224 | null | 73.749 | 113S282M176S5N | null | 397S1N38M136S | 1.005e-125 | null | 3.502e-17 | 100.0 | null | 100.0 | 114 | 395 | 1 | 282 | null | null | null | null | 398 | 435 | 2 | 39 | 114 | 191 | 192 | 209 | 210 | 260 | 261 | 269 | 270 | 377 | 405.0 | 434.0 | 378.0 | 404.0 | CC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCGTGTGCCTG-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGGGACCCGAAGTGGGAGCTACAGAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGGGACCCGAAGTGGGAGCTACAGAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGANNNNNAGTGGGAGCTACNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAGPEVGATEYYFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARXXVGATXXYFDYWGQGTLVTVSS | 1 | 294 | 300.0 | 311.0 | 317 | 364 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGGGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | AGTGGGAGCTAC | VGAT | AGTGGGAGCTAC | VGAT | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGGGACCCGAAGTGGGAGCTACAGAATACTACTTTGACTAC | AGPEVGATEYYFDY | TGTGCGGGACCCGAAGTGGGAGCTACAGAATACTACTTTGACTACTGG | 48.0 | CAGPEVGATEYYFDYW | 16.0 | 456.805 | 23.76 | 92.976 | 115S294M141S2N | 414S5N12M124S3N | 431S48M71S | 1.9709999999999998e-130 | 0.01734 | 5.494e-23 | 99.66 | 100.0 | 100.0 | 116 | 409 | 1 | 294 | 415.0 | 426.0 | 6.0 | 17.0 | 432 | 479 | 1 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 446.0 | 478.0 | 404.0 | 445.0 | CCCGA | 5 | AGAAT | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'G', '107 ': 'P', '108 ': 'E', '109 ': 'V', '110 ': 'G', '111 ': 'A', '112A': 'T', '112 ': 'E', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCGTGTGCCTG-1_contig_2 | AGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCGGACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ3*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCGGACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCNNACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPRTFGPGTKVDIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPXTFGPGTKVDIK | 1 | 286 | null | null | 289 | 322 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | null | null | null | null | ACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | ACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGCTTAATAGTTACCCTCGGACT | QQLNSYPRT | TGTCAACAGCTTAATAGTTACCCTCGGACTTTC | 33.0 | CQQLNSYPRTF | 11.0 | 447.456 | null | 66.059 | 86S286M172S1N | null | 374S4N34M136S | 1.2709999999999998e-127 | null | 6.887e-15 | 100.0 | null | 100.0 | 87 | 372 | 1 | 286 | null | null | null | null | 375 | 408 | 5 | 38 | 87 | 164 | 165 | 182 | 183 | 233 | 234 | 242 | 243 | 350 | 378.0 | 407.0 | 351.0 | 377.0 | GG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCTCAGCGACC-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCTCGAAAGGGCGGAGTGGTTATGAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-3*01 | IGHJ5*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCTCGAAAGGGCGGAGTGGTTATGAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCNNNNNNNNNNGGAGTGGTTATNAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARKGGVVMNWFDPWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXGVVXNWFDPWGQGTLVTVSS | 1 | 290 | 301.0 | 311.0 | 313 | 361 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGC | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGC | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GGAGTGGTTAT | GVV | GGAGTGGTTAT | GVV | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCTCGAAAGGGCGGAGTGGTTATGAACTGGTTCGACCCC | ARKGGVVMNWFDP | TGTGCTCGAAAGGGCGGAGTGGTTATGAACTGGTTCGACCCCTGG | 45.0 | CARKGGVVMNWFDPW | 15.0 | 453.689 | 21.837 | 94.899 | 136S290M142S6N | 436S14N11M121S6N | 448S2N49M71S | 1.768e-129 | 0.06793 | 1.497e-23 | 100.0 | 100.0 | 100.0 | 137 | 426 | 1 | 290 | 437.0 | 447.0 | 15.0 | 25.0 | 449 | 497 | 3 | 51 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 464.0 | 496.0 | 425.0 | 463.0 | TCGAAAGGGC | 10 | G | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'K', '108 ': 'G', '109 ': 'G', '110 ': 'V', '111 ': 'V', '112 ': 'M', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCTCAGCGACC-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGGTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ3*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGGTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCNNTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPVTFGPGTKVDIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPXTFGPGTKVDIK | 1 | 290 | null | null | 293 | 328 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPP | null | null | null | null | TCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | TCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAGCAGTATGGTAGCTCACCTCCGGTCACT | QQYGSSPPVT | TGTCAGCAGTATGGTAGCTCACCTCCGGTCACTTTC | 36.0 | CQQYGSSPPVTF | 12.0 | 453.689 | null | 69.904 | 104S290M174S | null | 396S2N36M136S | 1.768e-129 | null | 5.007e-16 | 100.0 | null | 100.0 | 105 | 394 | 1 | 290 | null | null | null | null | 397 | 432 | 3 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 402.0 | 431.0 | 372.0 | 401.0 | GG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '113 ': 'S', '114 ': 'P', '115 ': 'P', '116 ': 'V', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCTCGCCAAAT-1_contig_1 | GGGAGCATCACTCAACAACCACATCTGTCCTCTAGAGAAAACCCTGTGAGCACAGCTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAAGTGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGGCTCAAGGGGAGCCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-8*01 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGGCTCAAGGGGAGCCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGNNNNNNNGGGAGCNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGLKGSPDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGXXGSXDYWGQGTLVTVSS | 1 | 296 | 304.0 | 309.0 | 312 | 352 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARG | GGGAGC | GS | GGGAGC | GS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGTTATGAT | GYTFTSYD | ATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGG | INWVRQATGQGLEWMGW | ATGAACCCTAACAGTGGTAACACA | MNPNSGNT | GGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | GYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGGCTCAAGGGGAGCCCTGACTAC | ARGLKGSPDY | TGTGCGAGAGGGCTCAAGGGGAGCCCTGACTACTGG | 36.0 | CARGLKGSPDYW | 12.0 | 463.037 | 12.223 | 79.518 | 121S296M127S | 424S8N6M114S6N | 432S7N41M71S | 2.592e-132 | 50.92 | 6.117e-19 | 100.0 | 100.0 | 100.0 | 122 | 417 | 1 | 296 | 425.0 | 430.0 | 9.0 | 14.0 | 433 | 473 | 8 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 440.0 | 472.0 | 410.0 | 439.0 | GCTCAAG | 7 | CC | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'D'}, 'fwh2': {'39 ': 'I', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'T', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'M', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'N', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'L', '109 ': 'K', '113 ': 'G', '114 ': 'S', '115 ': 'P', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCTCGCCAAAT-1_contig_2 | AGCTTCAGCTGTGGTAGAGAAGACAGGATTCAGGACAATCTCCAGCATGGCCGGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCCCGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-47*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCCCGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCCNGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGPVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGPVFGGGTKLTVL | 1 | 296 | null | null | 298 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGP | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGP | null | null | null | null | GTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATTAT | SSNIGSNY | GTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VYWYQQLPGTAPKLLIY | AGGAATAAT | RNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAGTGGTCCCGTA | AAWDDSLSGPV | TGTGCAGCATGGGATGACAGCCTGAGTGGTCCCGTATTC | 39.0 | CAAWDDSLSGPVF | 13.0 | 463.037 | null | 66.059 | 103S296M246S | null | 400S4N34M211S | 3.082e-132 | null | 8.192e-15 | 100.0 | null | 100.0 | 104 | 399 | 1 | 296 | null | null | null | null | 401 | 434 | 5 | 38 | 104 | 178 | 179 | 202 | 203 | 253 | 254 | 262 | 263 | 370 | 404.0 | 433.0 | 371.0 | 403.0 | C | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'G', '116 ': 'P', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCCCTCTGTCCGT-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGCCTCTCTGGCCCGCCGGGTATAGCAGCAGCTGGTACTGTGGTTGGGGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD6-13*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGCCTCTCTGGCCCGCCGGGTATAGCAGCAGCTGGTACTGTGGTTGGGGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGNNNNNNNNNNNNNNNGGGTATAGCAGCAGCTGGTACNNNNNNNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCASLSGPPGIAAAGTVVGDDYWGQGTLVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAXXXXXXGIAAAGTXXXXDYWGQGTLVTVSS | 1 | 293 | 309.0 | 329.0 | 342 | 382 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCA | GGGTATAGCAGCAGCTGGTAC | GIAAAGT | GGGTATAGCAGCAGCTGGTAC | GIAAAGT | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGCCTCTCTGGCCCGCCGGGTATAGCAGCAGCTGGTACTGTGGTTGGGGATGACTAC | ASLSGPPGIAAAGTVVGDDY | TGTGCGAGCCTCTCTGGCCCGCCGGGTATAGCAGCAGCTGGTACTGTGGTTGGGGATGACTACTGG | 66.0 | CASLSGPPGIAAAGTVVGDDYW | 22.0 | 458.363 | 41.064 | 79.518 | 115S293M160S3N | 423S21M124S | 456S7N41M71S | 6.926e-131 | 1.107e-07 | 6.392e-19 | 100.0 | 100.0 | 100.0 | 116 | 408 | 1 | 293 | 424.0 | 444.0 | 1.0 | 21.0 | 457 | 497 | 8 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 464.0 | 496.0 | 404.0 | 463.0 | CCTCTCTGGCCCGCC | 15 | TGTGGTTGGGGA | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'L', '108 ': 'S', '109 ': 'G', '110 ': 'P', '111 ': 'P', '111A': 'G', '111B': 'I', '111C': 'A', '112D': 'A', '112C': 'A', '112B': 'G', '112A': 'T', '112 ': 'V', '113 ': 'V', '114 ': 'G', '115 ': 'D', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCCCTCTGTCCGT-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACGTCACCACCATGGCCTGGGCTCTGCTCCTCCTCAGCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATCTTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-8*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATCTTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNLVVFGGGTKLTVL | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNXVVFGGGTKLTVL | 1 | 294 | null | null | 297 | 334 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAAT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAAT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPPSASGSPGQSVTISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | KRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATGCAGGCAGCAACAATCTTGTGGTA | SSYAGSNNLVV | TGCAGCTCATATGCAGGCAGCAACAATCTTGTGGTATTC | 39.0 | CSSYAGSNNLVVF | 13.0 | 459.921 | null | 73.749 | 98S294M251S3N | null | 394S38M211S | 2.6640000000000004e-131 | null | 3.952e-17 | 100.0 | null | 100.0 | 99 | 392 | 1 | 294 | null | null | null | null | 395 | 432 | 1 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 402.0 | 431.0 | 369.0 | 401.0 | CT | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'V', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '110 ': 'S', '113 ': 'N', '114 ': 'N', '115 ': 'L', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTAGCGATCCC-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACATAGCAGCAGCTCTTTCCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD6-13*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACATAGCAGCAGCTCTTTCCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANATAGCAGCAGCTNNNNNNNNCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDIAAALSLWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXIAAAXXXWGQGTLVTVSS | 1 | 296 | 298.0 | 309.0 | 318 | 352 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | ATAGCAGCAGCT | IAAA | ATAGCAGCAGCT | IAAA | CTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGACATAGCAGCAGCTCTTTCCCTC | ARDIAAALSL | TGTGCGAGAGACATAGCAGCAGCTCTTTCCCTCTGG | 36.0 | CARDIAAALSLW | 12.0 | 463.037 | 23.76 | 67.981 | 121S296M127S | 418S4N12M114S5N | 438S13N35M71S | 2.592e-132 | 0.01715 | 1.816e-15 | 100.0 | 100.0 | 100.0 | 122 | 417 | 1 | 296 | 419.0 | 430.0 | 5.0 | 16.0 | 439 | 473 | 14 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 440.0 | 472.0 | 410.0 | 439.0 | C | 1 | CTTTCCCT | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'I', '109 ': 'A', '113 ': 'A', '114 ': 'A', '115 ': 'L', '116 ': 'S', '117 ': 'L'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTAGCGATCCC-1_contig_1 | AGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ1*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWWTFGQGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWWTFGQGTKVEIK | 1 | 282 | null | null | 283 | 319 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGG | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNW | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGG | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNW | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATAATAACTGGTGGACG | QQYNNWWT | TGTCAGCAGTATAATAACTGGTGGACGTTC | 30.0 | CQQYNNWWTF | 10.0 | 441.224 | null | 71.827 | 104S282M173S5N | null | 386S1N37M136S | 9.831e-126 | null | 1.299e-16 | 100.0 | null | 100.0 | 105 | 386 | 1 | 282 | null | null | null | null | 387 | 423 | 2 | 38 | 105 | 182 | 183 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 393.0 | 422.0 | 369.0 | 392.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '114 ': 'N', '115 ': 'W', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTAGCGCTTAT-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAATATTTGGGGGAGTCGGATCTTGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-16*01 | IGHJ3*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAATATTTGGGGGAGTCGGATCTTGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAANNTTTGGGGGAGTNNNNNNNNNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKYLGESDLGAFDIWGQGTMVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXLGEXXXXAFDIWGQGTMVTVSS | 1 | 294 | 297.0 | 307.0 | 318 | 364 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TTTGGGGGAGT | LGE | TTTGGGGGAGT | LGE | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAAATATTTGGGGGAGTCGGATCTTGGTGCTTTTGATATC | AKYLGESDLGAFDI | TGTGCGAAATATTTGGGGGAGTCGGATCTTGGTGCTTTTGATATCTGG | 48.0 | CAKYLGESDLGAFDIW | 16.0 | 459.921 | 21.837 | 91.054 | 136S294M141S2N | 432S14N11M128S12N | 453S3N47M71S | 2.365e-131 | 0.06829 | 2.1639999999999997e-22 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 433.0 | 443.0 | 15.0 | 25.0 | 454 | 500 | 4 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 467.0 | 499.0 | 425.0 | 466.0 | TA | 2 | CGGATCTTGG | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'Y', '108 ': 'L', '109 ': 'G', '110 ': 'E', '111 ': 'S', '112A': 'D', '112 ': 'L', '113 ': 'G', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTAGCGCTTAT-1_contig_1 | AGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGACGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ2*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGACGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCNNNGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPTYTFGQGTKLEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPXYTFGQGTKLEIK | 1 | 287 | null | null | 291 | 328 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATAATAACTGGCCTCCGACGTACACT | QQYNNWPPTYT | TGTCAGCAGTATAATAACTGGCCTCCGACGTACACTTTT | 39.0 | CQQYNNWPPTYTF | 13.0 | 449.014 | null | 73.749 | 104S287M177S | null | 394S1N38M136S | 4.515e-128 | null | 3.483e-17 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 395 | 432 | 2 | 39 | 105 | 182 | 183 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 402.0 | 431.0 | 369.0 | 401.0 | GAC | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '110 ': 'W', '113 ': 'P', '114 ': 'P', '115 ': 'T', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTAGGTGTGGT-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCGGTGGGACCGGGGGGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD1-26*01 | IGHJ3*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCGGTGGGACCGGGGGGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGANNNGTGGGANNNNNNNGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDRWDRGAFDIWGQGTMVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXWXXXAFDIWGQGTMVTVSS | 1 | 296 | 300.0 | 305.0 | 313 | 358 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GTGGGA | W | GTGGGA | W | GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAAAGATCGGTGGGACCGGGGGGCTTTTGATATC | AKDRWDRGAFDI | TGTGCGAAAGATCGGTGGGACCGGGGGGCTTTTGATATCTGG | 42.0 | CAKDRWDRGAFDIW | 14.0 | 463.037 | 12.223 | 89.131 | 137S296M133S | 436S6N6M124S8N | 449S4N46M71S | 2.7020000000000002e-132 | 53.02 | 8.130999999999999e-22 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 437.0 | 442.0 | 7.0 | 12.0 | 450 | 495 | 5 | 50 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 462.0 | 494.0 | 426.0 | 461.0 | TCG | 3 | CCGGGGG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'R', '109 ': 'W', '110 ': 'D', '112 ': 'R', '113 ': 'G', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTAGGTGTGGT-1_contig_1 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTGGGGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ3*02 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTGGGGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTNNNGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLGFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLXFGGGTKLTVL | 1 | 296 | null | null | 300 | 331 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTL | null | null | null | null | GTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | GTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATACAAGCAGCAGCACTCTGGGG | SSYTSSSTLG | TGCAGCTCATATACAAGCAGCAGCACTCTGGGGTTC | 36.0 | CSSYTSSSTLGF | 12.0 | 453.689 | null | 62.213 | 98S296M246S1N | null | 397S6N32M211S | 1.993e-129 | null | 1.168e-13 | 98.986 | null | 100.0 | 99 | 394 | 1 | 296 | null | null | null | null | 398 | 429 | 7 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | GGG | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '113 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'L', '117 ': 'G'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTAGTGTTAGA-1_contig_2 | ATTTCCTTAAATTCAGGTCCAACTCATAAGGGAAATGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCCTCGGCGCGATTTTTGGAGTGGTTGGCCGGGTACCGGGAGAACGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD3-3*01 | IGHJ5*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCCTCGGCGCGATTTTTGGAGTGGTTGGCCGGGTACCGGGAGAACGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCNNNNNNNCGATTTTTGGAGTGGTTNNNNNNNNNNNNNNNNAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASARFLEWLAGYRENGFDPWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXRFLEWXXXXXXNWFDPWGQGTLVTVSS | 1 | 293 | 301.0 | 317.0 | 334 | 382 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CGATTTTTGGAGTGGTT | RFLEW | CGATTTTTGGAGTGGTT | RFLEW | AACGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NGFDPWGQGTLVTVSS | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCCTCGGCGCGATTTTTGGAGTGGTTGGCCGGGTACCGGGAGAACGGGTTCGACCCC | ASARFLEWLAGYRENGFDP | TGTGCCTCGGCGCGATTTTTGGAGTGGTTGGCCGGGTACCGGGAGAACGGGTTCGACCCCTGG | 63.0 | CASARFLEWLAGYRENGFDPW | 21.0 | 458.363 | 33.373 | 89.131 | 128S293M160S6N | 428S6N17M136S8N | 461S2N49M71S | 7.053e-131 | 2.341e-05 | 8.350999999999999e-22 | 100.0 | 100.0 | 97.959 | 129 | 421 | 1 | 293 | 429.0 | 445.0 | 7.0 | 23.0 | 462 | 510 | 3 | 51 | 129 | 203 | 204 | 233 | 234 | 284 | 285 | 305 | 306 | 419 | 477.0 | 509.0 | 420.0 | 476.0 | CTCGGCG | 7 | GGCCGGGTACCGGGAG | 16.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'A', '108 ': 'R', '109 ': 'F', '110 ': 'L', '111 ': 'E', '111A': 'W', '111B': 'L', '111C': 'A', '112C': 'G', '112B': 'Y', '112A': 'R', '112 ': 'E', '113 ': 'N', '114 ': 'G', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTAGTGTTAGA-1_contig_1 | TGGGGAGGAATCAGTCCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-17*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPWTFGQGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTAT | LGWYQQKPGKAPKRLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CTACAGCATAATAGTTACCCGTGGACG | LQHNSYPWT | TGTCTACAGCATAATAGTTACCCGTGGACGTTC | 33.0 | CLQHNSYPWTF | 11.0 | 444.34 | null | 73.749 | 98S284M174S3N | null | 382S38M136S | 1.127e-126 | null | 3.408e-17 | 100.0 | null | 100.0 | 99 | 382 | 1 | 284 | null | null | null | null | 383 | 420 | 1 | 38 | 99 | 176 | 177 | 194 | 195 | 245 | 246 | 254 | 255 | 362 | 390.0 | 419.0 | 363.0 | 389.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'H', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTCAAATTGCC-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGGGAGGTATTACGATTTTTGGAAAACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGGGAGGTATTACGATTTTTGGAAAACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNGTATTACGATTTTTGGANNACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDREVLRFLENYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXVLRFLXXYYYGMDVWGQGTTVTVSS | 1 | 296 | 304.0 | 320.0 | 323 | 378 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GTATTACGATTTTTGGA | VLRFL | GTATTACGATTTTTGGA | VLRFL | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCGGGAGGTATTACGATTTTTGGAAAACTACTACTACGGTATGGACGTC | ARDREVLRFLENYYYGMDV | TGTGCGAGAGATCGGGAGGTATTACGATTTTTGGAAAACTACTACTACGGTATGGACGTCTGG | 63.0 | CARDREVLRFLENYYYGMDVW | 21.0 | 463.037 | 33.373 | 108.358 | 124S296M154S | 427S17M130S14N | 446S6N56M72S | 2.727e-132 | 2.312e-05 | 1.344e-27 | 100.0 | 100.0 | 100.0 | 125 | 420 | 1 | 296 | 428.0 | 444.0 | 1.0 | 17.0 | 447 | 502 | 7 | 62 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 470.0 | 502.0 | 413.0 | 469.0 | TCGGGAG | 7 | AA | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'R', '109 ': 'E', '110 ': 'V', '111 ': 'L', '111A': 'R', '111B': 'F', '111C': 'L', '112C': 'E', '112B': 'N', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTCAAATTGCC-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSFGPGTKVDIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSFGPGTKVDIK | 1 | 280 | null | null | 281 | 310 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNS | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNS | null | null | null | null | TCGGCCCTGGGACCAAAGTGGATATCAAAC | GPGTKVDIK | TCGGCCCTGGGACCAAAGTGGATATCAAAC | GPGTKVDIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGTATAATAGT | QQYNS | TGCCAACAGTATAATAGTTTC | 21.0 | CQQYNSF | 7.0 | 438.107 | null | 58.368 | 93S280M166S7N | null | 373S8N30M136S | 8.202999999999995e-125 | null | 1.41e-12 | 100.0 | null | 100.0 | 94 | 373 | 1 | 280 | null | null | null | null | 374 | 403 | 9 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 373.0 | 402.0 | 358.0 | 372.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '116 ': 'N', '117 ': 'S'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTCAATACGCT-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTTGGGGTATAGCAGTGGCAGGTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD6-19*01 | IGHJ3*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTTGGGGTATAGCAGTGGCAGGTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNNNGGGTATAGCAGTGGCNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVWGIAVAGDAFDIWGQGTMVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXGIAVAXDAFDIWGQGTMVTVSS | 1 | 295 | 300.0 | 314.0 | 318 | 367 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GGGTATAGCAGTGGC | GIAVA | GGGTATAGCAGTGGC | GIAVA | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAAAGTTTGGGGTATAGCAGTGGCAGGTGATGCTTTTGATATC | AKVWGIAVAGDAFDI | TGTGCGAAAGTTTGGGGTATAGCAGTGGCAGGTGATGCTTTTGATATCTGG | 51.0 | CAKVWGIAVAGDAFDIW | 17.0 | 461.479 | 29.528 | 96.822 | 136S295M143S1N | 435S15M124S6N | 453S50M71S | 8.031e-132 | 0.0003323 | 3.992e-24 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 436.0 | 450.0 | 1.0 | 15.0 | 454 | 503 | 1 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 470.0 | 502.0 | 425.0 | 469.0 | TTTG | 4 | AGG | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'V', '108 ': 'W', '109 ': 'G', '110 ': 'I', '111 ': 'A', '111A': 'V', '112A': 'A', '112 ': 'G', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTCAATACGCT-1_contig_1 | GCTCTGCTTCAGCTGTGGGCACAAGAGGCAGCACTCAGGACAATCTCCAGCATGGCCTGGTCTCCTCTCCTCCTCACTCTCCTCGCTCACTGCACAGGGTCCTGGGCCCAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-40*01 | null | IGLJ2*01 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGVVFGGGTKLTVL | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGVVFGGGTKLTVL | 1 | 297 | null | null | 298 | 334 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGT | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSG | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGT | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSG | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGC | QSVLTQPPSVSGAPGQRVTISCTGS | AGCTCCAACATCGGGGCAGGTTATGAT | SSNIGAGYD | GTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTAT | VHWYQQLPGTAPKLLIY | GGTAACAGC | GNS | AATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | NRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGTCCTATGACAGCAGCCTGAGTGGTGTGGTA | QSYDSSLSGVV | TGCCAGTCCTATGACAGCAGCCTGAGTGGTGTGGTATTC | 39.0 | CQSYDSSLSGVVF | 13.0 | 464.595 | null | 71.827 | 108S297M248S2N | null | 405S1N37M211S | 1.06e-132 | null | 1.522e-16 | 100.0 | null | 100.0 | 109 | 405 | 1 | 297 | null | null | null | null | 406 | 442 | 2 | 38 | 109 | 183 | 184 | 210 | 211 | 261 | 262 | 270 | 271 | 378 | 412.0 | 441.0 | 379.0 | 411.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '31 ': 'G', '35 ': 'A', '36 ': 'G', '37 ': 'Y', '38 ': 'D'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'N', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'G', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTCAATCTACG-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGCGATAGTAGTGGTTATTACTATCTCCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGCGATAGTAGTGGTTATTACTATCTCCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNGATAGTAGTGGTTATTACTANNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGDSSGYYYLLFDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXDSSGYYXXXFDYWGQGTLVTVSS | 1 | 295 | 298.0 | 317.0 | 325 | 367 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GATAGTAGTGGTTATTACTA | DSSGYY | GATAGTAGTGGTTATTACTA | DSSGYY | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGGCGATAGTAGTGGTTATTACTATCTCCTATTTGACTAC | AKGDSSGYYYLLFDY | TGTGCGAAAGGCGATAGTAGTGGTTATTACTATCTCCTATTTGACTACTGG | 51.0 | CAKGDSSGYYYLLFDYW | 17.0 | 461.479 | 39.141 | 83.363 | 136S295M143S1N | 433S10N20M121S1N | 460S5N43M71S | 8.031e-132 | 4.242e-07 | 4.4950000000000006e-20 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 434.0 | 453.0 | 11.0 | 30.0 | 461 | 503 | 6 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 470.0 | 502.0 | 425.0 | 469.0 | GC | 2 | TCTCCTA | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'G', '108 ': 'D', '109 ': 'S', '110 ': 'S', '111 ': 'G', '111A': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'L', '114 ': 'L', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTCAATCTACG-1_contig_1 | TTTGGCTCTTGATTTACATTGGGTACTTTCACAACCCACTGCTCATGAAATTTGCTTTTGTACTCACTGGTTGTTTTTGCATAGGCCCCTCCAGGCCACGACCAGCTGTTTGGATTTTATAAACGGGCCGTTTGCATTGTGAACTGAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ1*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPTFGQGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPTFGQGTKVEIK | 1 | 302 | null | null | 303 | 337 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAATATTATAGTACTCCGACG | QQYYSTPT | TGTCAGCAATATTATAGTACTCCGACGTTC | 30.0 | CQQYYSTPTF | 10.0 | 472.386 | null | 67.981 | 235S302M171S3N | null | 537S3N35M136S | 5.2109999999999996e-135 | null | 2.375e-15 | 100.0 | null | 100.0 | 236 | 537 | 1 | 302 | null | null | null | null | 538 | 572 | 4 | 38 | 236 | 313 | 314 | 349 | 350 | 400 | 401 | 409 | 410 | 517 | 542.0 | 571.0 | 518.0 | 541.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '114 ': 'S', '115 ': 'T', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTCAGTAGAGC-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGAGGGGGTATAGCAGTGGCTGGTCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD6-19*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGAGGGGGTATAGCAGTGGCTGGTCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNGGGTATAGCAGTGGCTGGTNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGGGIAVAGPFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXGIAVAGXFDYWGQGTLVTVSS | 1 | 295 | 300.0 | 318.0 | 321 | 364 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GGGTATAGCAGTGGCTGGT | GIAVAG | GGGTATAGCAGTGGCTGGT | GIAVAG | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGAGGGGGTATAGCAGTGGCTGGTCCCTTTGACTAC | ARGGGIAVAGPFDY | TGTGCGAGAGGAGGGGGTATAGCAGTGGCTGGTCCCTTTGACTACTGG | 48.0 | CARGGGIAVAGPFDYW | 16.0 | 461.479 | 37.218 | 85.286 | 137S295M140S1N | 436S19M117S2N | 457S4N44M71S | 8.046e-132 | 1.603e-06 | 1.1810000000000001e-20 | 100.0 | 100.0 | 100.0 | 138 | 432 | 1 | 295 | 437.0 | 455.0 | 1.0 | 19.0 | 458 | 501 | 5 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 468.0 | 500.0 | 426.0 | 467.0 | GAGG | 4 | CC | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'G', '110 ': 'I', '111 ': 'A', '112A': 'V', '112 ': 'A', '113 ': 'G', '114 ': 'P', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTCAGTAGAGC-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1D-8*01 | null | IGKJ1*01 | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPWTFGQGTKVEIK | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPWTFGQGTKVEIK | 1 | 284 | null | null | 285 | 322 | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFP | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGT | VIWMTQSPSLLSASTGDRVTISCRMS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTAT | LAWYQQKPGKAPELLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATTATAGTTTCCCGTGGACG | QQYYSFPWT | TGTCAACAGTATTATAGTTTCCCGTGGACGTTC | 33.0 | CQQYYSFPWTF | 11.0 | 444.34 | null | 73.749 | 93S284M174S3N | null | 377S38M136S | 1.117e-126 | null | 3.377e-17 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 378 | 415 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'V', '2 ': 'I', '3 ': 'W', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'L', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'T', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'M', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'E', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'C', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'F', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTCATATGAGA-1_contig_2 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGATCCCAGTGGCTGGCACGGGGTCTGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD6-19*01 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGATCCCAGTGGCTGGCACGGGGTCTGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNNCAGTGGCTGGNNNNNNNNNNNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARGIPVAGTGSGAFDIWGQGTMVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXVAGXXXXAFDIWGQGTMVTVSS | 1 | 295 | 302.0 | 311.0 | 324 | 370 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | CAGTGGCTGG | VAG | CAGTGGCTGG | VAG | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGGGATCCCAGTGGCTGGCACGGGGTCTGGTGCTTTTGATATC | ARGIPVAGTGSGAFDI | TGTGCGAGAGGGATCCCAGTGGCTGGCACGGGGTCTGGTGCTTTTGATATCTGG | 54.0 | CARGIPVAGTGSGAFDIW | 18.0 | 461.479 | 19.914 | 91.054 | 136S295M146S1N | 437S8N10M130S3N | 459S3N47M71S | 8.075e-132 | 0.2617 | 2.1869999999999997e-22 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 438.0 | 447.0 | 9.0 | 18.0 | 460 | 506 | 4 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 473.0 | 505.0 | 425.0 | 472.0 | GGATCC | 6 | CACGGGGTCTGG | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'I', '109 ': 'P', '110 ': 'V', '111 ': 'A', '111A': 'G', '112B': 'T', '112A': 'G', '112 ': 'S', '113 ': 'G', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTCATATGAGA-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGGGGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGGGGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCNNNNACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPGTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXTFGQGTKLEIK | 1 | 287 | null | null | 292 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCTCACCGGGGACT | QQYGSSPGT | TGTCAGCAGTATGGTAGCTCACCGGGGACTTTT | 33.0 | CQQYGSSPGTF | 11.0 | 449.014 | null | 66.059 | 104S287M174S3N | null | 395S5N34M136S | 4.49e-128 | null | 7.158e-15 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 396 | 429 | 6 | 39 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | GGGG | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTCATGTAGTC-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGATTTTTGGAGGGGATGGTAGACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGATTTTTGGAGGGGATGGTAGACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGATTTTTGGAGNNNNNNNNNNACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARFLEGMVDYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARFLEXXXXYYGMDVWGQGTTVTVSS | 1 | 294 | 295.0 | 303.0 | 314 | 366 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | TTTTTGGAG | FLE | TTTTTGGAG | FLE | ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGATTTTTGGAGGGGATGGTAGACTACTACGGTATGGACGTC | ARFLEGMVDYYGMDV | TGTGCGAGATTTTTGGAGGGGATGGTAGACTACTACGGTATGGACGTCTGG | 51.0 | CARFLEGMVDYYGMDVW | 17.0 | 459.921 | 17.992 | 102.59 | 121S294M144S2N | 415S9N9M135S13N | 434S9N53M72S | 2.313e-131 | 0.9606 | 7.13e-26 | 100.0 | 100.0 | 100.0 | 122 | 415 | 1 | 294 | 416.0 | 424.0 | 10.0 | 18.0 | 435 | 487 | 10 | 62 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 455.0 | 487.0 | 410.0 | 454.0 | null | 0 | GGGATGGTAG | 10.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'F', '108 ': 'L', '109 ': 'E', '110 ': 'G', '111 ': 'M', '111A': 'V', '112A': 'D', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTCATGTAGTC-1_contig_1 | TGAGCGCAGAAGGCAGGACTCGGGACAATCTTCATCATGACCTGCTCCCCTCTCCTCCTCACCCTTCTCATTCACTGCACAGGGTCCTGGGCCCAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGGCCATTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCA | L | F | T | F | T | F | T | IGLV1-51*01 | null | IGLJ1*01 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGGCCATTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGGNNNTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGHYVFGTGTKVTVL | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGXYVFGTGTKVTVL | 1 | 296 | null | null | 300 | 337 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAG | null | null | null | null | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGC | QSVLTQPPSVSAAPGQKVTISCSGS | AGCTCCAACATTGGGAATAATTAT | SSNIGNNY | GTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTAT | VSWYQQLPGTAPKLLIY | GACAATAAT | DNN | AAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGC | KRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | GGAACATGGGATAGCAGCCTGAGTGCTGGCCATTATGTC | GTWDSSLSAGHYV | TGCGGAACATGGGATAGCAGCCTGAGTGCTGGCCATTATGTCTTC | 45.0 | CGTWDSSLSAGHYVF | 15.0 | 463.037 | null | 73.749 | 93S296M209S | null | 392S38M168S | 2.8470000000000003e-132 | null | 3.671e-17 | 100.0 | null | 100.0 | 94 | 389 | 1 | 296 | null | null | null | null | 393 | 430 | 1 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 400.0 | 429.0 | 361.0 | 399.0 | CCA | 3 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'G', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'T', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'G', '106 ': 'T', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '111 ': 'L', '112 ': 'S', '113 ': 'A', '114 ': 'G', '115 ': 'H', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTGTGTTCTTT-1_contig_2 | GGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATCTCCTGCAGCTTCTCTCTGACCCTACCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD6-13*01 | IGHJ4*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATCTCCTGCAGCTTCTCTCTGACCCTACCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATNNNNNGCAGCTNNNNNNNNNNNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDLLQLLSDPTFDYWGQGTLVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDXXQLXXXXXFDYWGQGTLVTVSS | 1 | 297 | 303.0 | 308.0 | 324 | 367 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GCAGCT | QL | GCAGCT | QL | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAAAAGATCTCCTGCAGCTTCTCTCTGACCCTACCTTTGACTAC | AKDLLQLLSDPTFDY | TGTGCAAAAGATCTCCTGCAGCTTCTCTCTGACCCTACCTTTGACTACTGG | 51.0 | CAKDLLQLLSDPTFDYW | 17.0 | 464.595 | 12.223 | 85.286 | 141S297M141S1N | 443S10N6M130S5N | 464S4N44M71S | 9.346e-133 | 54.26 | 1.1960000000000002e-20 | 100.0 | 100.0 | 100.0 | 142 | 438 | 1 | 297 | 444.0 | 449.0 | 11.0 | 16.0 | 465 | 508 | 5 | 48 | 142 | 216 | 217 | 240 | 241 | 291 | 292 | 315 | 316 | 429 | 475.0 | 507.0 | 430.0 | 474.0 | CTCCT | 5 | TCTCTCTGACCCTAC | 15.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'L', '109 ': 'L', '110 ': 'Q', '111 ': 'L', '111A': 'L', '112A': 'S', '112 ': 'D', '113 ': 'P', '114 ': 'T', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTGTGTTCTTT-1_contig_1 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGATCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTAVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTAVFGGGTKLTVL | 1 | 284 | null | null | 285 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTA | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTA | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTGCGGTA | QAWDSSTAV | TGTCAGGCGTGGGACAGCAGCACTGCGGTATTC | 33.0 | CQAWDSSTAVF | 11.0 | 444.34 | null | 67.981 | 94S284M246S1N | null | 378S3N35M211S | 1.266e-126 | null | 2.089e-15 | 100.0 | null | 100.0 | 95 | 378 | 1 | 284 | null | null | null | null | 379 | 413 | 4 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'A', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTGTTGGTAAA-1_contig_2 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGGAGCTGGGCTGCAGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGGAGCTGGGCTGCAGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGGAGCTNNNNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGSWAAGYYFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGSXXXXXYFDYWGQGTLVTVSS | 1 | 295 | 296.0 | 301.0 | 314 | 361 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | GGAGCT | S | GGAGCT | S | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGGAGCTGGGCTGCAGGTTACTACTTTGACTAC | ARGSWAAGYYFDY | TGTGCGAGAGGGAGCTGGGCTGCAGGTTACTACTTTGACTACTGG | 45.0 | CARGSWAAGYYFDYW | 15.0 | 461.479 | 12.223 | 92.976 | 115S295M137S1N | 410S9N6M131S5N | 428S48M71S | 7.677000000000001e-132 | 51.2 | 5.463e-23 | 100.0 | 100.0 | 100.0 | 116 | 410 | 1 | 295 | 411.0 | 416.0 | 10.0 | 15.0 | 429 | 476 | 1 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 443.0 | 475.0 | 404.0 | 442.0 | null | 0 | GGGCTGCAGGTT | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'S', '109 ': 'W', '110 ': 'A', '111 ': 'A', '112 ': 'G', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTGTTGGTAAA-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPTFGQGTKVEIK | 1 | 290 | null | null | 291 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCTCCGACG | QQYGSSPPT | TGTCAGCAGTATGGTAGCTCACCTCCGACGTTC | 33.0 | CQQYGSSPPTF | 11.0 | 453.689 | null | 67.981 | 104S290M171S | null | 394S3N35M136S | 1.759e-129 | null | 1.888e-15 | 100.0 | null | 100.0 | 105 | 394 | 1 | 290 | null | null | null | null | 395 | 429 | 4 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTTCAAACGGG-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGGGGACTACGGTGACTACGTTTCGACCCCTTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD4-17*01 | IGHJ5*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGGGGACTACGGTGACTACGTTTCGACCCCTTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNGACTACGGTGACTACNNNNNNNNNNNNTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGGDYGDYVSTPFDPWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXDYGDYXXXXFDPWGQGTLVTVSS | 1 | 295 | 301.0 | 315.0 | 328 | 370 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GACTACGGTGACTAC | DYGDY | GACTACGGTGACTAC | DYGDY | TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDPWGQGTLVTVSS | TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDPWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGGGGGGACTACGGTGACTACGTTTCGACCCCTTTCGACCCC | ARGGDYGDYVSTPFDP | TGTGCGAGAGGGGGGGACTACGGTGACTACGTTTCGACCCCTTTCGACCCCTGG | 54.0 | CARGGDYGDYVSTPFDPW | 18.0 | 461.479 | 29.528 | 83.363 | 124S295M146S1N | 424S1N15M126S | 451S8N43M71S | 7.943e-132 | 0.000327 | 4.423e-20 | 100.0 | 100.0 | 100.0 | 125 | 419 | 1 | 295 | 425.0 | 439.0 | 2.0 | 16.0 | 452 | 494 | 9 | 51 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 461.0 | 493.0 | 413.0 | 460.0 | GGGGG | 5 | GTTTCGACCCCT | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'D', '110 ': 'Y', '111 ': 'G', '111A': 'D', '112B': 'Y', '112A': 'V', '112 ': 'S', '113 ': 'T', '114 ': 'P', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTTCAAACGGG-1_contig_1 | AGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCCATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ5*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCCATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCNATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPITFGQGTRLEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPITFGQGTRLEIK | 1 | 284 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | ATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | ATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAACAGTATGATAATCTCCCCATCACC | QQYDNLPIT | TGTCAACAGTATGATAATCTCCCCATCACCTTC | 33.0 | CQQYDNLPITF | 11.0 | 444.34 | null | 71.827 | 93S284M174S3N | null | 378S1N37M136S | 1.117e-126 | null | 1.28e-16 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 379 | 415 | 2 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTTCAGTTAGC-1_contig_1 | GGAGAGCCTGCTGAATTCTGGCTGACCAGGGCAGTCACCAGAGCTCCAGACAATGTCTGTCTCCTTCCTCATCTTCCTGCCCGTGCTGGGCCTCCCATGGGGTGTCCTGTCACAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGGGCCCATATAGCAGCTCGTCCTGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV6-1*01 | IGHD6-6*01 | IGHJ6*02 | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGGGCCCATATAGCAGCTCGTCCTGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGNNNNNNTATAGCAGCTCGTCCNNACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARAHIAARPDYYYGMDVWGQGTTVTVSS | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCAXXXIAARPXYYYGMDVWGQGTTVTVSS | 1 | 302 | 309.0 | 323.0 | 326 | 381 | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAG | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCA | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAG | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCA | TATAGCAGCTCGTCC | IAARP | TATAGCAGCTCGTCC | IAARP | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCC | QVQLQQSGPGLVKPSQTLSLTCAIS | GGGGACAGTGTCTCTAGCAACAGTGCTGCT | GDSVSSNSAA | TGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGG | WNWIRQSPSRGLEWLGR | ACATACTACAGGTCCAAGTGGTATAAT | TYYRSKWYN | GATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGT | DYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAGGGCCCATATAGCAGCTCGTCCTGACTACTACTACGGTATGGACGTC | ARAHIAARPDYYYGMDV | TGTGCAAGGGCCCATATAGCAGCTCGTCCTGACTACTACTACGGTATGGACGTCTGG | 57.0 | CARAHIAARPDYYYGMDVW | 19.0 | 472.386 | 29.528 | 108.358 | 112S302M151S3N | 420S3N15M130S | 437S6N56M72S | 4.137e-135 | 0.000327 | 1.3229999999999999e-27 | 100.0 | 100.0 | 100.0 | 113 | 414 | 1 | 302 | 421.0 | 435.0 | 4.0 | 18.0 | 438 | 493 | 7 | 62 | 113 | 187 | 188 | 217 | 218 | 268 | 269 | 295 | 296 | 409 | 461.0 | 493.0 | 410.0 | 460.0 | GGCCCA | 6 | TG | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'I', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'D', '29 ': 'S', '30 ': 'V', '31 ': 'S', '34 ': 'S', '35 ': 'N', '36 ': 'S', '37 ': 'A', '38 ': 'A'}, 'fwh2': {'39 ': 'W', '40 ': 'N', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'S', '46 ': 'P', '47 ': 'S', '48 ': 'R', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'T', '57 ': 'Y', '58 ': 'Y', '59 ': 'R', '60 ': 'S', '62 ': 'K', '63 ': 'W', '64 ': 'Y', '65 ': 'N'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'V', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'I', '77 ': 'T', '78 ': 'I', '79 ': 'N', '80 ': 'P', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'Q', '91 ': 'L', '92 ': 'N', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'H', '109 ': 'I', '110 ': 'A', '111 ': 'A', '111A': 'R', '111B': 'P', '112B': 'D', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTTCAGTTAGC-1_contig_2 | ATGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAGTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ3*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAGTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACANTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQFTFGPGTKVDIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALXFTFGPGTKVDIK | 1 | 293 | null | null | 295 | 331 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACA | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQAL | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACA | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQAL | null | null | null | null | TTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | TTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | ATGCAAGCTCTACAGTTCACT | MQALQFT | TGCATGCAAGCTCTACAGTTCACTTTC | 27.0 | CMQALQFTF | 9.0 | 458.363 | null | 71.827 | 96S293M174S9N | null | 390S1N37M136S | 6.862000000000005e-131 | null | 1.309e-16 | 100.0 | null | 100.0 | 97 | 389 | 1 | 293 | null | null | null | null | 391 | 427 | 2 | 38 | 97 | 174 | 175 | 207 | 208 | 258 | 259 | 267 | 268 | 375 | 397.0 | 426.0 | 376.0 | 396.0 | G | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '115 ': 'Q', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTTCATCGATG-1_contig_1 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGCGGTAAAGAGTGGAGAAGCAGTGGCTGGGTACGGATACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD6-19*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGCGGTAAAGAGTGGAGAAGCAGTGGCTGGGTACGGATACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNNNNNNNNNNNNAGCAGTGGCTGGNNNNNNNTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARAVKSGEAVAGYGYYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXXXAVAGXXYYYYYGMDVWGQGTTVTVSS | 1 | 295 | 312.0 | 323.0 | 331 | 390 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | AGCAGTGGCTGG | AVAG | AGCAGTGGCTGG | AVAG | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGCGGTAAAGAGTGGAGAAGCAGTGGCTGGGTACGGATACTACTACTACTACGGTATGGACGTC | ARAVKSGEAVAGYGYYYYYGMDV | TGTGCGAGAGCGGTAAAGAGTGGAGAAGCAGTGGCTGGGTACGGATACTACTACTACTACGGTATGGACGTCTGG | 75.0 | CARAVKSGEAVAGYGYYYYYGMDVW | 25.0 | 461.479 | 23.76 | 116.049 | 124S295M167S1N | 435S6N12M139S3N | 454S2N60M72S | 8.207e-132 | 0.01849 | 6.645e-30 | 100.0 | 100.0 | 100.0 | 125 | 419 | 1 | 295 | 436.0 | 447.0 | 7.0 | 18.0 | 455 | 514 | 3 | 62 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 482.0 | 514.0 | 413.0 | 481.0 | CGGTAAAGAGTGGAGA | 16 | GTACGGA | 7.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'V', '109 ': 'K', '110 ': 'S', '111 ': 'G', '111A': 'E', '111B': 'A', '111C': 'V', '111D': 'A', '111E': 'G', '112E': 'Y', '112D': 'G', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTTCATCGATG-1_contig_2 | TGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ4*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCNCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEIK | 1 | 299 | null | null | 301 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | ATGCAAGCTCTACAAACCCCCCTCACT | MQALQTPLT | TGCATGCAAGCTCTACAAACCCCCCTCACTTTC | 33.0 | CMQALQTPLTF | 11.0 | 464.595 | null | 71.827 | 95S299M174S3N | null | 395S1N37M136S | 9.210999999999999e-133 | null | 1.321e-16 | 99.666 | null | 100.0 | 96 | 394 | 1 | 299 | null | null | null | null | 396 | 432 | 2 | 38 | 96 | 173 | 174 | 206 | 207 | 257 | 258 | 266 | 267 | 374 | 402.0 | 431.0 | 375.0 | 401.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTTCGATAGAA-1_contig_1 | GCAGAGCCTGCTGAATTCTGGCTGACCAGGGCAGTCACCAGAGCTCCAGACAATGTCTGTCTCCTTCCTCATCTTCCTGCCCGTGCTGGGCCTCCCATGGGGTGTCCTGTCACAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGGGGCGAGTATAGCAGTGGCTGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV6-1*01 | IGHD6-19*01 | IGHJ4*02 | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGGGGCGAGTATAGCAGTGGCTGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGNNNNNNGTATAGCAGTGGCTGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARGEYSSGWYYFDYWGQGTLVTVSS | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCAXXXYSSGWYYFDYWGQGTLVTVSS | 1 | 302 | 309.0 | 325.0 | 326 | 373 | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAG | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCA | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAG | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCA | GTATAGCAGTGGCTGGT | YSSGW | GTATAGCAGTGGCTGGT | YSSGW | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCC | QVQLQQSGPGLVKPSQTLSLTCAIS | GGGGACAGTGTCTCTAGCAACAGTGCTGCT | GDSVSSNSAA | TGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGG | WNWIRQSPSRGLEWLGR | ACATACTACAGGTCCAAGTGGTATAAT | TYYRSKWYN | GATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGT | DYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAAGGGGCGAGTATAGCAGTGGCTGGTACTACTTTGACTAC | ARGEYSSGWYYFDY | TGTGCAAGGGGCGAGTATAGCAGTGGCTGGTACTACTTTGACTACTGG | 48.0 | CARGEYSSGWYYFDYW | 16.0 | 472.386 | 33.373 | 92.976 | 112S302M142S3N | 420S2N17M119S2N | 437S48M71S | 4.0679999999999997e-135 | 2.238e-05 | 5.555e-23 | 100.0 | 100.0 | 100.0 | 113 | 414 | 1 | 302 | 421.0 | 437.0 | 3.0 | 19.0 | 438 | 485 | 1 | 48 | 113 | 187 | 188 | 217 | 218 | 268 | 269 | 295 | 296 | 409 | 452.0 | 484.0 | 410.0 | 451.0 | GGGCGA | 6 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'I', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'D', '29 ': 'S', '30 ': 'V', '31 ': 'S', '34 ': 'S', '35 ': 'N', '36 ': 'S', '37 ': 'A', '38 ': 'A'}, 'fwh2': {'39 ': 'W', '40 ': 'N', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'S', '46 ': 'P', '47 ': 'S', '48 ': 'R', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'T', '57 ': 'Y', '58 ': 'Y', '59 ': 'R', '60 ': 'S', '62 ': 'K', '63 ': 'W', '64 ': 'Y', '65 ': 'N'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'V', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'I', '77 ': 'T', '78 ': 'I', '79 ': 'N', '80 ': 'P', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'Q', '91 ': 'L', '92 ': 'N', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'E', '109 ': 'Y', '110 ': 'S', '111 ': 'S', '112A': 'G', '112 ': 'W', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTTCGATAGAA-1_contig_2 | GGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTTTTGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTTTTGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCNNNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLLWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXXWTFGQGTKVEIK | 1 | 283 | null | null | 288 | 325 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCTTTTGTGGACG | QQSYSTLLWT | TGTCAACAGAGTTACAGTACCCTTTTGTGGACGTTC | 36.0 | CQQSYSTLLWTF | 12.0 | 442.782 | null | 73.749 | 95S283M178S4N | null | 382S38M136S | 3.3199999999999997e-126 | null | 3.408e-17 | 100.0 | null | 100.0 | 96 | 378 | 1 | 283 | null | null | null | null | 383 | 420 | 1 | 38 | 96 | 173 | 174 | 191 | 192 | 242 | 243 | 251 | 252 | 359 | 390.0 | 419.0 | 360.0 | 389.0 | TTTT | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '113 ': 'T', '114 ': 'L', '115 ': 'L', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTTCGGAAACG-1_contig_1 | TGGGGAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGTAGCAGCTCCGGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD6-6*01 | IGHJ4*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGTAGCAGCTCCGGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNTAGCAGCTCNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARGSSSGDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARXSSSXDYWGQGTLVTVSS | 1 | 295 | 297.0 | 305.0 | 309 | 349 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | TAGCAGCTC | SSS | TAGCAGCTC | SSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGTAGCAGCTCCGGTGACTAC | ARGSSSGDY | TGTGCGAGAGGTAGCAGCTCCGGTGACTACTGG | 33.0 | CARGSSSGDYW | 11.0 | 461.479 | 17.992 | 79.518 | 80S295M125S1N | 376S5N9M115S4N | 388S7N41M71S | 6.981e-132 | 0.8574 | 5.612e-19 | 100.0 | 100.0 | 100.0 | 81 | 375 | 1 | 295 | 377.0 | 385.0 | 6.0 | 14.0 | 389 | 429 | 8 | 48 | 81 | 155 | 156 | 179 | 180 | 230 | 231 | 254 | 255 | 368 | 396.0 | 428.0 | 369.0 | 395.0 | G | 1 | CGG | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'S', '109 ': 'S', '114 ': 'S', '115 ': 'G', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTTCGGAAACG-1_contig_2 | AGGCTGGCCACACTTCATGCAGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1D-8*01 | null | IGKJ2*01 | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPYTFGQGTKLEIK | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPYTFGQGTKLEIK | 1 | 284 | null | null | 285 | 322 | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFP | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGT | VIWMTQSPSLLSASTGDRVTISCRMS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTAT | LAWYQQKPGKAPELLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATTATAGTTTCCCGTACACT | QQYYSFPYT | TGTCAACAGTATTATAGTTTCCCGTACACTTTT | 33.0 | CQQYYSFPYTF | 11.0 | 444.34 | null | 73.749 | 113S284M174S3N | null | 397S1N38M136S | 1.159e-126 | null | 3.502e-17 | 100.0 | null | 100.0 | 114 | 397 | 1 | 284 | null | null | null | null | 398 | 435 | 2 | 39 | 114 | 191 | 192 | 209 | 210 | 260 | 261 | 269 | 270 | 377 | 405.0 | 434.0 | 378.0 | 404.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'V', '2 ': 'I', '3 ': 'W', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'L', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'T', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'M', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'E', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'C', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'F', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTTCGTACCGG-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATCTTAAAGGGAGAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD1-26*01 | IGHJ5*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATCTTAAAGGGAGAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNGGGAGNAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDLKGRNWFDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXXGXNWFDPWGQGTLVTVSS | 1 | 296 | 304.0 | 308.0 | 310 | 358 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | GGGAG | G | GGGAG | G | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCTTAAAGGGAGAAACTGGTTCGACCCC | ARDLKGRNWFDP | TGTGCGAGAGATCTTAAAGGGAGAAACTGGTTCGACCCCTGG | 42.0 | CARDLKGRNWFDPW | 14.0 | 463.037 | 10.301 | 94.899 | 121S296M133S | 424S8N5M121S7N | 430S2N49M71S | 2.6220000000000002e-132 | 195.2 | 1.449e-23 | 100.0 | 100.0 | 100.0 | 122 | 417 | 1 | 296 | 425.0 | 429.0 | 9.0 | 13.0 | 431 | 479 | 3 | 51 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 446.0 | 478.0 | 410.0 | 445.0 | TCTTAAA | 7 | A | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'K', '110 ': 'G', '112 ': 'R', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTTCGTACCGG-1_contig_1 | CTTCCAGAGCCCATATCAATGCCTGGGTCAGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ4*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPLTFGGGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPLTFGGGTKVEIK | 1 | 287 | null | null | 288 | 325 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCCCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGTATAATAACTGGCCCCCGCTCACT | QQYNNWPPLT | TGTCAGCAGTATAATAACTGGCCCCCGCTCACTTTC | 36.0 | CQQYNNWPPLTF | 12.0 | 445.898 | null | 73.749 | 133S287M174S | null | 420S38M136S | 4.081e-127 | null | 3.646e-17 | 99.652 | null | 100.0 | 134 | 420 | 1 | 287 | null | null | null | null | 421 | 458 | 1 | 38 | 134 | 211 | 212 | 229 | 230 | 280 | 281 | 289 | 290 | 397 | 428.0 | 457.0 | 398.0 | 427.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTCTTTCTGCAGTA-1_contig_2 | ACAACCACACCCCTCCTAAGAAGAAGCCCCTAGACCACAGCTCCACACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGATCTGGAGGGGTCCCTCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV7-4-1*02 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGATCTGGAGGGGTCCCTCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGANNTGGAGTGGTNNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARDLEGSLYYYYGMDVWGQGTTVTVSS | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARXXEWXXYYYYGMDVWGQGTTVTVSS | 1 | 296 | 299.0 | 307.0 | 312 | 369 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAR | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAR | TGGAGGGGT | EG | TGGAGTGGT | EW | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGSELKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MNWVRQAPGQGLEWMGW | ATCAACACCAACACTGGGAACCCA | INTNTGNP | ACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGT | TYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCTGGAGGGGTCCCTCTACTACTACTACGGTATGGACGTC | ARDLEGSLYYYYGMDV | TGTGCGAGAGATCTGGAGGGGTCCCTCTACTACTACTACGGTATGGACGTCTGG | 54.0 | CARDLEGSLYYYYGMDVW | 18.0 | 463.037 | 12.223 | 112.203 | 106S296M145S | 404S13N9M134S9N | 417S4N58M72S | 2.607e-132 | 51.2 | 8.903999999999995e-29 | 100.0 | 88.889 | 100.0 | 107 | 402 | 1 | 296 | 405.0 | 413.0 | 14.0 | 22.0 | 418 | 475 | 5 | 62 | 107 | 181 | 182 | 205 | 206 | 256 | 257 | 280 | 281 | 394 | 443.0 | 475.0 | 395.0 | 442.0 | TC | 2 | CCCT | 4.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'S', '11 ': 'E', '12 ': 'L', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'T', '59 ': 'N', '62 ': 'T', '63 ': 'G', '64 ': 'N', '65 ': 'P'}, 'fwh3': {'66 ': 'T', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'G', '71 ': 'F', '72 ': 'T', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'V', '78 ': 'F', '79 ': 'S', '80 ': 'L', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'V', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'E', '110 ': 'G', '111 ': 'S', '111A': 'L', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTCTTTCTGCAGTA-1_contig_1 | TGAGCGCAGAAGGCAGGACTCGGGACAATCTTCATCATGACCTGCTCCCCTCTCCTCCTCACCCTTCTCATTCACTGCACAGGGTCCTGGGCCCAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-51*01 | null | IGLJ2*01 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSDVVFGGGTKLTVL | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | 1 | 295 | null | null | 296 | 331 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGATG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSD | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGC | QSVLTQPPSVSAAPGQKVTISCSGS | AGCTCCAACATTGGGAATAATTAT | SSNIGNNY | GTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTAT | VSWYQQLPGTAPKLLIY | GACAATAAT | DNN | AAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGC | KRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GGAACATGGGATAGCAGCCTGAGTGATGTGGTA | GTWDSSLSDVV | TGCGGAACATGGGATAGCAGCCTGAGTGATGTGGTATTC | 39.0 | CGTWDSSLSDVVF | 13.0 | 458.363 | null | 69.904 | 93S295M247S1N | null | 388S2N36M211S | 7.743000000000001e-131 | null | 5.609e-16 | 99.661 | null | 100.0 | 94 | 388 | 1 | 295 | null | null | null | null | 389 | 424 | 3 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 394.0 | 423.0 | 361.0 | 393.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'G', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'T', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'G', '106 ': 'T', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'D', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTAGAGACTAT-1_contig_1 | GCCTTTATTATTTGGGGATGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTTCGACAGGGTCCTTTAGCAGTGGCTGGAGCGTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD6-19*01 | IGHJ3*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTTCGACAGGGTCCTTTAGCAGTGGCTGGAGCGTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGANNNNNNNNNNTAGCAGTGGCTGGNNNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCSTGSFSSGWSVDAFDIWGQGTMVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXXSSGWXXDAFDIWGQGTMVTVSS | 1 | 295 | 306.0 | 318.0 | 324 | 373 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTTCGA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | TAGCAGTGGCTGG | SSGW | TAGCAGTGGCTGG | SSGW | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | TCGACAGGGTCCTTTAGCAGTGGCTGGAGCGTTGATGCTTTTGATATC | STGSFSSGWSVDAFDI | TGTTCGACAGGGTCCTTTAGCAGTGGCTGGAGCGTTGATGCTTTTGATATCTGG | 54.0 | CSTGSFSSGWSVDAFDIW | 18.0 | 458.363 | 25.682 | 96.822 | 111S295M149S4N | 416S5N13M126S3N | 434S50M71S | 6.759000000000005e-131 | 0.004616 | 3.857e-24 | 99.661 | 100.0 | 100.0 | 112 | 406 | 1 | 295 | 417.0 | 429.0 | 6.0 | 18.0 | 435 | 484 | 1 | 50 | 112 | 186 | 187 | 216 | 217 | 267 | 268 | 288 | 289 | 402 | 451.0 | 483.0 | 403.0 | 450.0 | CAGGGTCCTT | 10 | AGCGT | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'S', '106 ': 'T', '107 ': 'G', '108 ': 'S', '109 ': 'F', '110 ': 'S', '111 ': 'S', '111A': 'G', '112B': 'W', '112A': 'S', '112 ': 'V', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTAGAGACTAT-1_contig_2 | GCTGTGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ1*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYYVFGTGTKVTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYYVFGTGTKVTVL | 1 | 288 | null | null | 289 | 325 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTAT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTAT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | null | null | null | null | TATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAATCAGCAGACAGCAGTGGTACTTATTATGTC | QSADSSGTYYV | TGTCAATCAGCAGACAGCAGTGGTACTTATTATGTCTTC | 39.0 | CQSADSSGTYYVF | 13.0 | 450.572 | null | 71.827 | 100S288M248S2N | null | 388S1N37M211S | 1.7170000000000002e-128 | null | 1.482e-16 | 100.0 | null | 100.0 | 101 | 388 | 1 | 288 | null | null | null | null | 389 | 425 | 2 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 395.0 | 424.0 | 362.0 | 394.0 | null | 0 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'T', '115 ': 'Y', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTAGAGCAATT-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATTTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | null | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATTTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDFGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXGMDVWGQGTTVTVSS | 1 | 302 | null | null | 306 | 351 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | null | null | null | null | CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACCACAGATTTCGGTATGGACGTC | TTDFGMDV | TGTACCACAGATTTCGGTATGGACGTCTGG | 30.0 | CTTDFGMDVW | 10.0 | 472.386 | null | 89.131 | 137S302M121S | null | 442S16N46M72S | 4.099e-135 | null | 8.042999999999999e-22 | 100.0 | null | 100.0 | 138 | 439 | 1 | 302 | null | null | null | null | 443 | 488 | 17 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 456.0 | 488.0 | 432.0 | 455.0 | TTT | 3 | null | null | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'D', '108 ': 'F', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTAGAGCAATT-1_contig_2 | GTGGGCTCAGGAGGCAGAGCTCTGGGAATCTCACCATGGCCTGGACCCCTCTCCTGCTCCCCCTCCTCACTTTCTGCACAGTCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-10*01 | null | IGLJ2*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHRVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHRVFGGGTKLTVL | 1 | 290 | null | null | 291 | 325 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNH | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNH | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAAAAATAT | ALPKKY | GCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTAT | AYWYQQKSGQAPVLVIY | GAGGACAGC | EDS | AAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGT | KRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TACTCAACAGACAGCAGTGGTAATCATAGGGTA | YSTDSSGNHRV | TGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTC | 39.0 | CYSTDSSGNHRVF | 13.0 | 453.689 | null | 67.981 | 92S290M246S | null | 382S3N35M211S | 1.954e-129 | null | 2.103e-15 | 100.0 | null | 100.0 | 93 | 382 | 1 | 290 | null | null | null | null | 383 | 417 | 4 | 38 | 93 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 387.0 | 416.0 | 354.0 | 386.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'S', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'M', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'V', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Y', '106 ': 'S', '107 ': 'T', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'N', '115 ': 'H', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTAGCTCCTTC-1_contig_1 | ATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGCCGCTGGTGGGGAGTATAGCAGCAGCTGGTACGGTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD6-13*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGCCGCTGGTGGGGAGTATAGCAGCAGCTGGTACGGTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNNNNNNNGTATAGCAGCAGCTGGTACNNTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARAAGGEYSSSWYGYYYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXXYSSSWYXYYYYYGMDVWGQGTTVTVSS | 1 | 292 | 306.0 | 324.0 | 327 | 387 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTATAGCAGCAGCTGGTAC | YSSSWY | GTATAGCAGCAGCTGGTAC | YSSSWY | TTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGCCGCTGGTGGGGAGTATAGCAGCAGCTGGTACGGTTACTACTACTACTACGGTATGGACGTC | ARAAGGEYSSSWYGYYYYYGMDV | TGTGCGAGAGCCGCTGGTGGGGAGTATAGCAGCAGCTGGTACGGTTACTACTACTACTACGGTATGGACGTCTGG | 75.0 | CARAAGGEYSSSWYGYYYYYGMDVW | 25.0 | 456.805 | 37.218 | 117.971 | 94S292M167S1N | 399S2N19M135S | 420S1N61M72S | 1.983e-130 | 1.548e-06 | 1.6520000000000002e-30 | 100.0 | 100.0 | 100.0 | 95 | 386 | 1 | 292 | 400.0 | 418.0 | 3.0 | 21.0 | 421 | 481 | 2 | 62 | 95 | 169 | 170 | 193 | 194 | 244 | 245 | 265 | 266 | 379 | 449.0 | 481.0 | 380.0 | 448.0 | CCGCTGGTGGGGA | 13 | GG | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'A', '109 ': 'G', '110 ': 'G', '111 ': 'E', '111A': 'Y', '111B': 'S', '111C': 'S', '111D': 'S', '111E': 'W', '112E': 'Y', '112D': 'G', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTAGCTCCTTC-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACGTCACCACCATGGCCTGGGCTCTGCTCCTCCTCAGCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-8*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSVVFGGGTKLTVL | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSVVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGC | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGS | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGC | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGS | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPPSASGSPGQSVTISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | KRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATGCAGGCAGCGTGGTA | SSYAGSVV | TGCAGCTCATATGCAGGCAGCGTGGTATTC | 30.0 | CSSYAGSVVF | 10.0 | 450.572 | null | 71.827 | 98S288M248S9N | null | 386S1N37M211S | 1.7120000000000002e-128 | null | 1.477e-16 | 100.0 | null | 100.0 | 99 | 386 | 1 | 288 | null | null | null | null | 387 | 423 | 2 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 393.0 | 422.0 | 369.0 | 392.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'V', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '114 ': 'G', '115 ': 'S', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTAGTATGACA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAAAAAGGGGGTGGGAGCTATCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD1-26*01 | IGHJ6*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAAAAAGGGGGTGGGAGCTATCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAANNNNNNNNGTGGGAGCTANNCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKKRGWELSVWGQGTTVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXWELXVWGQGTTVTVSS | 1 | 294 | 303.0 | 312.0 | 315 | 351 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GTGGGAGCTA | WEL | GTGGGAGCTA | WEL | CGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | VWGQGTTVTVSS | CGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | VWGQGTTVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAAAAAAAGGGGGTGGGAGCTATCCGTC | AKKRGWELSV | TGTGCGAAAAAAAGGGGGTGGGAGCTATCCGTCTGG | 36.0 | CAKKRGWELSVW | 12.0 | 459.921 | 19.914 | 71.827 | 136S294M129S2N | 438S6N10M111S4N | 450S25N37M72S | 2.313e-131 | 0.2534 | 1.299e-16 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 439.0 | 448.0 | 7.0 | 16.0 | 451 | 487 | 26 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 455.0 | 487.0 | 425.0 | 454.0 | AAAAGGGG | 8 | TC | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'K', '108 ': 'R', '109 ': 'G', '113 ': 'W', '114 ': 'E', '115 ': 'L', '116 ': 'S', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTAGTATGACA-1_contig_1 | GGAGGAGTCAGACCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTCTGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-6*01 | null | IGKJ1*01 | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTCTGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTCNGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYPLTFGQGTKVEIK | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYPXTFGQGTKVEIK | 1 | 286 | null | null | 288 | 322 | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYP | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCTC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | AIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LGWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CTACAAGATTACAATTACCCTCTGACG | LQDYNYPLT | TGTCTACAAGATTACAATTACCCTCTGACGTTC | 33.0 | CLQDYNYPLTF | 11.0 | 447.456 | null | 67.981 | 95S286M172S1N | null | 382S3N35M136S | 1.293e-127 | null | 1.847e-15 | 100.0 | null | 100.0 | 96 | 381 | 1 | 286 | null | null | null | null | 383 | 417 | 4 | 38 | 96 | 173 | 174 | 191 | 192 | 242 | 243 | 251 | 252 | 359 | 387.0 | 416.0 | 360.0 | 386.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'A', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'D', '108 ': 'Y', '109 ': 'N', '114 ': 'Y', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTCAATGCCAT-1_contig_1 | TGGGATACTTTCTGAGACTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGAAAGCAGCTCGGATTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-4*07 | IGHD6-6*01 | IGHJ5*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGAAAGCAGCTCGGATTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGANNNNAGCAGCTCGNNNNACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCAREESSSDYNWFDPWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARXXSSSXXNWFDPWGQGTLVTVSS | 1 | 293 | 298.0 | 306.0 | 311 | 361 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCAR | AGCAGCTCG | SSS | AGCAGCTCG | SSS | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAAGAAAGCAGCTCGGATTACAACTGGTTCGACCCC | AREESSSDYNWFDP | TGTGCGAGAGAAGAAAGCAGCTCGGATTACAACTGGTTCGACCCCTGG | 48.0 | CAREESSSDYNWFDPW | 16.0 | 458.363 | 17.992 | 98.744 | 98S293M139S | 395S6N9M126S3N | 408S51M71S | 6.438e-131 | 0.9099 | 9.707000000000001e-25 | 100.0 | 100.0 | 100.0 | 99 | 391 | 1 | 293 | 396.0 | 404.0 | 7.0 | 15.0 | 409 | 459 | 1 | 51 | 99 | 173 | 174 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 426.0 | 458.0 | 384.0 | 425.0 | AGAA | 4 | GATT | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'E', '109 ': 'S', '110 ': 'S', '111 ': 'S', '112A': 'D', '112 ': 'Y', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTCAATGCCAT-1_contig_2 | TGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTCCGTCAGGCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTCCGTCAGGCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTNNNNNNNNCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSPSGTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSXXXTFGGGTKVEIK | 1 | 279 | null | null | 288 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYS | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYS | null | null | null | null | CACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | CACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGAGTTACAGTCCGTCAGGCACT | QQSYSPSGT | TGTCAACAGAGTTACAGTCCGTCAGGCACTTTC | 33.0 | CQQSYSPSGTF | 11.0 | 436.549 | null | 67.981 | 94S279M179S8N | null | 381S3N35M136S | 2.477e-124 | null | 1.844e-15 | 100.0 | null | 100.0 | 95 | 373 | 1 | 279 | null | null | null | null | 382 | 416 | 4 | 38 | 95 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 386.0 | 415.0 | 359.0 | 385.0 | CCGTCAGG | 8 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'P', '115 ': 'S', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTCAATGTAAG-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATTTAATTAACGGTGACTACAACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD4-17*01 | IGHJ2*01 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATTTAATTAACGGTGACTACAACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGANNNNNNNNACGGTGACTACNACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLINGDYNWYFDLWGRGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXGDYXWYFDLWGRGTLVTVSS | 1 | 296 | 305.0 | 315.0 | 317 | 367 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | ACGGTGACTAC | GDY | ACGGTGACTAC | GDY | ACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | WYFDLWGRGTLVTVSS | ACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | WYFDLWGRGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCGTGGCACCCTGGTCACTGTCTCCTCA | WGRGTLVTVSS | GCGAAAGATTTAATTAACGGTGACTACAACTGGTACTTCGATCTC | AKDLINGDYNWYFDL | TGTGCGAAAGATTTAATTAACGGTGACTACAACTGGTACTTCGATCTCTGG | 51.0 | CAKDLINGDYNWYFDLW | 17.0 | 463.037 | 21.837 | 98.744 | 137S296M142S | 441S5N11M123S | 453S2N51M71S | 2.732e-132 | 0.06878 | 1.055e-24 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 442.0 | 452.0 | 6.0 | 16.0 | 454 | 504 | 3 | 53 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 471.0 | 503.0 | 426.0 | 470.0 | TTTAATTA | 8 | A | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'L', '109 ': 'I', '110 ': 'N', '111 ': 'G', '111A': 'D', '112A': 'Y', '112 ': 'N', '113 ': 'W', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'L'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'R', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTCAATGTAAG-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCCCTGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1D-8*01 | null | IGKJ1*01 | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCCCTGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCNNNGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPLTFGQGTKVEIK | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPXTFGQGTKVEIK | 1 | 284 | null | null | 288 | 322 | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFP | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGT | VIWMTQSPSLLSASTGDRVTISCRMS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTAT | LAWYQQKPGKAPELLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATTATAGTTTCCCCCTGACG | QQYYSFPLT | TGTCAACAGTATTATAGTTTCCCCCTGACGTTC | 33.0 | CQQYYSFPLTF | 11.0 | 444.34 | null | 67.981 | 93S284M174S3N | null | 380S3N35M136S | 1.117e-126 | null | 1.84e-15 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 381 | 415 | 4 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | CCT | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'V', '2 ': 'I', '3 ': 'W', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'L', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'T', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'M', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'E', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'C', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'F', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTCACAGATTC-1_contig_2 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATCGCCAGCTGCCATGGCACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD2-2*01 | IGHJ6*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATCGCCAGCTGCCATGGCACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNNCCAGCTGCTATGNNACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDRQLPWHYYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARXXQLLXXYYYYGMDVWGQGTTVTVSS | 1 | 296 | 300.0 | 311.0 | 314 | 372 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CCAGCTGCCATG | QLP | CCAGCTGCTATG | QLL | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCGCCAGCTGCCATGGCACTACTACTACTACGGTATGGACGTC | ARDRQLPWHYYYYGMDV | TGTGCGAGAGATCGCCAGCTGCCATGGCACTACTACTACTACGGTATGGACGTCTGG | 57.0 | CARDRQLPWHYYYYGMDVW | 19.0 | 463.037 | 17.992 | 114.126 | 116S296M148S | 415S17N12M133S2N | 429S3N59M72S | 2.6720000000000003e-132 | 0.9623 | 2.4049999999999998e-29 | 100.0 | 91.667 | 100.0 | 117 | 412 | 1 | 296 | 416.0 | 427.0 | 18.0 | 29.0 | 430 | 488 | 4 | 62 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 456.0 | 488.0 | 405.0 | 455.0 | TCG | 3 | GC | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'R', '109 ': 'Q', '110 ': 'L', '111 ': 'P', '111A': 'W', '111B': 'H', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTCACAGATTC-1_contig_1 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTAGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ1*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTAGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTNGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPRTFGQGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPXTFGQGTKVEIK | 1 | 285 | null | null | 287 | 322 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCT | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCT | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGCGTAGCAACTGGCCTAGGACG | QQRSNWPRT | TGTCAGCAGCGTAGCAACTGGCCTAGGACGTTC | 33.0 | CQQRSNWPRTF | 11.0 | 445.898 | null | 69.904 | 107S285M173S2N | null | 393S2N36M136S | 3.894e-127 | null | 4.98e-16 | 100.0 | null | 100.0 | 108 | 392 | 1 | 285 | null | null | null | null | 394 | 429 | 3 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | A | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '114 ': 'W', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTCACAGTCGC-1_contig_2 | TGGGGGACTCCTGTGCCCCACCATGGACACACTTTGCTACACACTCCTGCTGCTGACCACCCCTTCCTGGGTCTTGTCCCAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGATACCGGCGCGGTGGCTACGAGAATACAGCTATGGTTCTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | H | F | T | F | T | F | T | IGHV2-26*01 | IGHD5-18*01 | IGHJ6*02 | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGATACCGGCGCGGTGGCTACGAGAATACAGCTATGGTTCTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGATACNNNNNNNNNNNNNNNNNNNATACAGCTATGGTTNTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARIPARWLREYSYGSYYYYYGMDVWGQGTTVTVSS | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARIXXXXXXXYSYGXYYYYYGMDVWGQGTTVTVSS | 1 | 301 | 321.0 | 334.0 | 336 | 396 | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGATAC | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARI | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGATAC | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARI | ATACAGCTATGGTT | YSYG | ATACAGCTATGGTT | YSYG | TTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCT | QVTLKESGPVLVKPTETLTLTCTVS | GGGTTCTCACTCAGCAATGCTAGAATGGGT | GFSLSNARMG | GTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACAC | VSWIRQPPGKALEWLAH | ATTTTTTCGAATGACGAAAAA | IFSNDEK | TCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | SYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCACGGATACCGGCGCGGTGGCTACGAGAATACAGCTATGGTTCTTACTACTACTACTACGGTATGGACGTC | ARIPARWLREYSYGSYYYYYGMDV | TGTGCACGGATACCGGCGCGGTGGCTACGAGAATACAGCTATGGTTCTTACTACTACTACTACGGTATGGACGTCTGG | 78.0 | CARIPARWLREYSYGSYYYYYGMDVW | 26.0 | 470.828 | 27.605 | 117.971 | 79S301M198S | 399S4N14M165S2N | 414S1N61M103S | 1.241e-134 | 0.001269 | 1.7280000000000002e-30 | 100.0 | 100.0 | 100.0 | 80 | 380 | 1 | 301 | 400.0 | 413.0 | 5.0 | 18.0 | 415 | 475 | 2 | 62 | 80 | 154 | 155 | 184 | 185 | 235 | 236 | 256 | 257 | 370 | 443.0 | 475.0 | 371.0 | 442.0 | CGGCGCGGTGGCTACGAGA | 19 | C | 1.0 | GCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | IGHD | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'V', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'N', '35 ': 'A', '36 ': 'R', '37 ': 'M', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'H'}, 'cdrh2': {'56 ': 'I', '57 ': 'F', '58 ': 'S', '59 ': 'N', '63 ': 'D', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'S', '69 ': 'T', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'I', '108 ': 'P', '109 ': 'A', '110 ': 'R', '111 ': 'W', '111A': 'L', '111B': 'R', '111C': 'E', '111D': 'Y', '111E': 'S', '112F': 'Y', '112E': 'G', '112D': 'S', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTCACAGTCGC-1_contig_1 | TGGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGGGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGAGTTACAGTACCCCGCTCACT | QQSYSTPLT | TGTCAACAGAGTTACAGTACCCCGCTCACTTTC | 33.0 | CQQSYSTPLTF | 11.0 | 444.34 | null | 73.749 | 96S284M174S3N | null | 380S38M136S | 1.123e-126 | null | 3.396e-17 | 100.0 | null | 100.0 | 97 | 380 | 1 | 284 | null | null | null | null | 381 | 418 | 1 | 38 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 388.0 | 417.0 | 361.0 | 387.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTCATGTAGTC-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGAGGGGTATAGCAGCAGCTGGTACGGTTCAGGCCTATGGTGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD6-13*01 | IGHJ6*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGAGGGGTATAGCAGCAGCTGGTACGGTTCAGGCCTATGGTGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANGGGTATAGCAGCAGCTGGTACNNNNNNNNNNNNNNNNNCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEGYSSSWYGSGLWCYGMDVWGQGTTVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXGYSSSWYXXXXXXYGMDVWGQGTTVTVSS | 1 | 296 | 298.0 | 318.0 | 336 | 384 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GGGTATAGCAGCAGCTGGTAC | GYSSSWY | GGGTATAGCAGCAGCTGGTAC | GYSSSWY | CTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAAAGAGGGGTATAGCAGCAGCTGGTACGGTTCAGGCCTATGGTGCTACGGTATGGACGTC | AKEGYSSSWYGSGLWCYGMDV | TGTGCGAAAGAGGGGTATAGCAGCAGCTGGTACGGTTCAGGCCTATGGTGCTACGGTATGGACGTCTGG | 69.0 | CAKEGYSSSWYGSGLWCYGMDVW | 23.0 | 463.037 | 41.064 | 94.899 | 136S296M160S | 433S21M138S | 471S13N49M72S | 2.817e-132 | 1.155e-07 | 1.562e-23 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 434.0 | 454.0 | 1.0 | 21.0 | 472 | 520 | 14 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 488.0 | 520.0 | 425.0 | 487.0 | G | 1 | GGTTCAGGCCTATGGTG | 17.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'E', '108 ': 'G', '109 ': 'Y', '110 ': 'S', '111 ': 'S', '111A': 'S', '111B': 'W', '111C': 'Y', '111D': 'G', '112D': 'S', '112C': 'G', '112B': 'L', '112A': 'W', '112 ': 'C', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTCATGTAGTC-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCGGGGTGGGCGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCGGGGTGGGCGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCNNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSGWAFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSXWTFGQGTKVEIK | 1 | 284 | null | null | 288 | 325 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | null | null | null | null | GTGGGCGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WAFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATTCGGGGTGGGCG | QQYNSYSGWA | TGCCAACAGTATAATAGTTATTCGGGGTGGGCGTTC | 36.0 | CQQYNSYSGWAF | 12.0 | 444.34 | null | 67.981 | 93S284M177S3N | null | 380S38M136S | 1.123e-126 | null | 1.851e-15 | 100.0 | null | 97.368 | 94 | 377 | 1 | 284 | null | null | null | null | 381 | 418 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 388.0 | 417.0 | 358.0 | 387.0 | GGG | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '113 ': 'Y', '114 ': 'S', '115 ': 'G', '116 ': 'W', '117 ': 'A'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTGTGGTGTAG-1_contig_2 | GGGAGAGGAGCCCAGCACTGGGATTCCGAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTTGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGATATTCTCGGGGCAGTGGCTGGTACGATCAAACGGTTCTACCAGAAAATTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-53*04 | IGHD6-19*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGATATTCTCGGGGCAGTGGCTGGTACGATCAAACGGTTCTACCAGAAAATTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGANNNNNNNNNNGCAGTGGCTGGTACNNNNNNNNNNNNNNNNNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARYSRGSGWYDQTVLPENYYFDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARXXXXSGWYXXXXXXXXXYFDYWGQGTLVTVSS | 1 | 291 | 302.0 | 315.0 | 341 | 388 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCAR | GCAGTGGCTGGTAC | SGWY | GCAGTGGCTGGTAC | SGWY | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGGTTCACCGTCAGTAGCAACTAC | GFTVSSNY | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTT | MSWVRQAPGKGLEWVSV | ATTTATAGCGGTGGTAGCACA | IYSGGST | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGATATTCTCGGGGCAGTGGCTGGTACGATCAAACGGTTCTACCAGAAAATTACTACTTTGACTAC | ARYSRGSGWYDQTVLPENYYFDY | TGTGCGAGATATTCTCGGGGCAGTGGCTGGTACGATCAAACGGTTCTACCAGAAAATTACTACTTTGACTACTGG | 75.0 | CARYSRGSGWYDQTVLPENYYFDYW | 25.0 | 455.247 | 27.605 | 92.976 | 130S291M168S2N | 431S7N14M144S | 470S48M71S | 6.204e-130 | 0.001293 | 5.891e-23 | 100.0 | 100.0 | 100.0 | 131 | 421 | 1 | 291 | 432.0 | 445.0 | 8.0 | 21.0 | 471 | 518 | 1 | 48 | 131 | 205 | 206 | 229 | 230 | 280 | 281 | 301 | 302 | 415 | 485.0 | 517.0 | 416.0 | 484.0 | TATTCTCGGG | 10 | GATCAAACGGTTCTACCAGAAAATT | 25.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'V', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'S', '59 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'H', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'Y', '108 ': 'S', '109 ': 'R', '110 ': 'G', '111 ': 'S', '111A': 'G', '111B': 'W', '111C': 'Y', '111D': 'D', '111E': 'Q', '112E': 'T', '112D': 'V', '112C': 'L', '112B': 'P', '112A': 'E', '112 ': 'N', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTGTGGTGTAG-1_contig_1 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCGGGGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ5*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCGGGGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCNNNGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPGITFGQGTRLEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPXITFGQGTRLEIK | 1 | 287 | null | null | 291 | 328 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGCGTAGCAACTGGCCTCCGGGGATCACC | QQRSNWPPGIT | TGTCAGCAGCGTAGCAACTGGCCTCCGGGGATCACCTTC | 39.0 | CQQRSNWPPGITF | 13.0 | 449.014 | null | 73.749 | 107S287M177S | null | 397S38M136S | 4.5410000000000003e-128 | null | 3.502e-17 | 100.0 | null | 100.0 | 108 | 394 | 1 | 287 | null | null | null | null | 398 | 435 | 1 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | GGG | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '110 ': 'W', '113 ': 'P', '114 ': 'P', '115 ': 'G', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTGTTGGGACA-1_contig_2 | GGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGGGCTAGGGATAGTAGTGGTTATTACGTTGTGTTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-30-4*01 | IGHD3-22*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGGGCTAGGGATAGTAGTGGTTATTACGTTGTGTTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGNNNNNNNGATAGTAGTGGTTATTACNNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARARDSSGYYVVFFDYWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXDSSGYYXXXFDYWGQGTLVTVSS | 1 | 296 | 304.0 | 321.0 | 331 | 373 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | GATAGTAGTGGTTATTAC | DSSGYY | GATAGTAGTGGTTATTAC | DSSGYY | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGATTACTAC | GGSISSGDYY | TGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCCAGGGCTAGGGATAGTAGTGGTTATTACGTTGTGTTTTTTGACTAC | ARARDSSGYYVVFFDY | TGTGCCAGGGCTAGGGATAGTAGTGGTTATTACGTTGTGTTTTTTGACTACTGG | 54.0 | CARARDSSGYYVVFFDYW | 18.0 | 463.037 | 35.296 | 83.363 | 119S296M148S3N | 422S10N18M123S3N | 449S5N43M71S | 2.687e-132 | 5.979e-06 | 4.4070000000000004e-20 | 100.0 | 100.0 | 100.0 | 120 | 415 | 1 | 296 | 423.0 | 440.0 | 11.0 | 28.0 | 450 | 492 | 6 | 48 | 120 | 194 | 195 | 224 | 225 | 275 | 276 | 296 | 297 | 410 | 459.0 | 491.0 | 411.0 | 458.0 | GGCTAGG | 7 | GTTGTGTTT | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'R', '109 ': 'D', '110 ': 'S', '111 ': 'S', '111A': 'G', '112B': 'Y', '112A': 'Y', '112 ': 'V', '113 ': 'V', '114 ': 'F', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTGTTGGGACA-1_contig_1 | TGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCCTCTATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCCTCTATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCCNNNATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPLFTFGPGTKVDIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPXFTFGPGTKVDIK | 1 | 287 | null | null | 291 | 328 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPP | null | null | null | null | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGAGTTACAGTACCCCTCCTCTATTCACT | QQSYSTPPLFT | TGTCAACAGAGTTACAGTACCCCTCCTCTATTCACTTTC | 39.0 | CQQSYSTPPLFTF | 13.0 | 449.014 | null | 73.749 | 94S287M177S | null | 384S38M136S | 4.4320000000000003e-128 | null | 3.421e-17 | 100.0 | null | 100.0 | 95 | 381 | 1 | 287 | null | null | null | null | 385 | 422 | 1 | 38 | 95 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 392.0 | 421.0 | 359.0 | 391.0 | TCT | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '110 ': 'T', '113 ': 'P', '114 ': 'P', '115 ': 'L', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTTCACAGTAC-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAAATGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | null | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAAATGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGANNNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARNVDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXDYWGQGTLVTVSS | 1 | 291 | null | null | 298 | 337 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | null | null | null | null | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAAATGTGGACTAC | ARNVDY | TGTGCGAGAAATGTGGACTACTGG | 24.0 | CARNVDYW | 8.0 | 455.247 | null | 77.595 | 92S291M117S2N | null | 389S8N40M71S | 5.249e-130 | null | 2.128e-18 | 100.0 | null | 100.0 | 93 | 383 | 1 | 291 | null | null | null | null | 390 | 429 | 9 | 48 | 93 | 167 | 168 | 191 | 192 | 242 | 243 | 263 | 264 | 377 | 396.0 | 428.0 | 378.0 | 395.0 | AATGTG | 6 | null | null | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'N', '115 ': 'V', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTTCACAGTAC-1_contig_2 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCCTTATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ3*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCCTTATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCNNNATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPLFTFGPGTKVDIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPXFTFGPGTKVDIK | 1 | 287 | null | null | 291 | 328 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | null | null | null | null | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAGCAGCGTAGCAACTGGCCTCCCTTATTCACT | QQRSNWPPLFT | TGTCAGCAGCGTAGCAACTGGCCTCCCTTATTCACTTTC | 39.0 | CQQRSNWPPLFTF | 13.0 | 449.014 | null | 73.749 | 107S287M177S | null | 397S38M136S | 4.5410000000000003e-128 | null | 3.502e-17 | 100.0 | null | 100.0 | 108 | 394 | 1 | 287 | null | null | null | null | 398 | 435 | 1 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | CTT | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '110 ': 'W', '113 ': 'P', '114 ': 'P', '115 ': 'L', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTTCACATACG-1_contig_1 | AGTGCTTTCTGAGAGTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGCAGGCCGTATAGTGGGAGCTACTCTGGGTGGAACGAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-34*01 | IGHD1-26*01 | IGHJ5*02 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGCAGGCCGTATAGTGGGAGCTACTCTGGGTGGAACGAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGNNNNNNNNGTATAGTGGGAGCTACTNNNNNNNNNNNNAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGAGRIVGATLGGTNWFDPWGQGTLVTVSS | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGXXXIVGATXXXXNWFDPWGQGTLVTVSS | 1 | 293 | 302.0 | 318.0 | 331 | 379 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARG | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARG | GTATAGTGGGAGCTACT | IVGAT | GTATAGTGGGAGCTACT | IVGAT | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTAT | QVQLQQWGAGLLKPSETLSLTCAVY | GGTGGGTCCTTCAGTGGTTACTAC | GGSFSGYY | TGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWIRQPPGKGLEWIGE | ATCAATCATAGTGGAAGCACC | INHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGCGCAGGCCGTATAGTGGGAGCTACTCTGGGTGGAACGAACTGGTTCGACCCC | ARGAGRIVGATLGGTNWFDP | TGTGCGAGAGGCGCAGGCCGTATAGTGGGAGCTACTCTGGGTGGAACGAACTGGTTCGACCCCTGG | 66.0 | CARGAGRIVGATLGGTNWFDPW | 22.0 | 458.363 | 33.373 | 94.899 | 95S293M157S | 396S1N17M132S2N | 425S2N49M71S | 6.631000000000005e-131 | 2.193e-05 | 1.436e-23 | 100.0 | 100.0 | 100.0 | 96 | 388 | 1 | 293 | 397.0 | 413.0 | 2.0 | 18.0 | 426 | 474 | 3 | 51 | 96 | 170 | 171 | 194 | 195 | 245 | 246 | 266 | 267 | 380 | 441.0 | 473.0 | 381.0 | 440.0 | CGCAGGCC | 8 | CTGGGTGGAACG | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'Q', '7 ': 'W', '8 ': 'G', '9 ': 'A', '11 ': 'G', '12 ': 'L', '13 ': 'L', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'Y'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'F', '35 ': 'S', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'A', '109 ': 'G', '110 ': 'R', '111 ': 'I', '111A': 'V', '111B': 'G', '111C': 'A', '112D': 'T', '112C': 'L', '112B': 'G', '112A': 'G', '112 ': 'T', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTTCACATACG-1_contig_2 | CCTGGGTCAGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCAGGCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ4*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCAGGCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCNNNCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXTFGGGTKVEIK | 1 | 287 | null | null | 291 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | CACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | CACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGTATGGTAGCTCACCAGGCACT | QQYGSSPGT | TGTCAGCAGTATGGTAGCTCACCAGGCACTTTC | 33.0 | CQQYGSSPGTF | 11.0 | 449.014 | null | 67.981 | 112S287M174S3N | null | 402S3N35M136S | 4.5320000000000005e-128 | null | 1.915e-15 | 100.0 | null | 100.0 | 113 | 399 | 1 | 287 | null | null | null | null | 403 | 437 | 4 | 38 | 113 | 190 | 191 | 211 | 212 | 262 | 263 | 271 | 272 | 379 | 407.0 | 436.0 | 380.0 | 406.0 | AGG | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTTCTAACCGA-1_contig_1 | ATACTTTCTGAGAGTCCTGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCTCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCGCAACCCGGGTATAGCAGCAGCTGGAACGTCCCGACGGCCTGGTCCTCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-4*02 | IGHD6-13*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCGCAACCCGGGTATAGCAGCAGCTGGAACGTCCCGACGGCCTGGTCCTCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNNGGGTATAGCAGCAGCTGGNNNNNNNNNNNNNNNNNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARAQPGYSSSWNVPTAWSSFDYWGQGTLVTVSS | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARXXXGYSSSWXXXXXXXXFDYWGQGTLVTVSS | 1 | 295 | 304.0 | 321.0 | 346 | 388 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAR | GGGTATAGCAGCAGCTGG | GYSSSW | GGGTATAGCAGCAGCTGG | GYSSSW | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCT | QVQLQESGPGLVKPSGTLSLTCAVS | GGTGGCTCCATCAGCAGTAGTAACTGG | GGSISSSNW | TGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWVRQPPGKGLEWIGE | ATCTATCATAGTGGGAGCACC | IYHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGCGCAACCCGGGTATAGCAGCAGCTGGAACGTCCCGACGGCCTGGTCCTCTTTTGACTAC | ARAQPGYSSSWNVPTAWSSFDY | TGTGCGAGAGCGCAACCCGGGTATAGCAGCAGCTGGAACGTCCCGACGGCCTGGTCCTCTTTTGACTACTGG | 72.0 | CARAQPGYSSSWNVPTAWSSFDYW | 24.0 | 461.479 | 35.296 | 83.363 | 94S295M164S1N | 397S18M138S3N | 439S5N43M71S | 7.765e-132 | 5.871e-06 | 4.327e-20 | 100.0 | 100.0 | 100.0 | 95 | 389 | 1 | 295 | 398.0 | 415.0 | 1.0 | 18.0 | 440 | 482 | 6 | 48 | 95 | 169 | 170 | 196 | 197 | 247 | 248 | 268 | 269 | 382 | 449.0 | 481.0 | 383.0 | 448.0 | CGCAACCC | 8 | AACGTCCCGACGGCCTGGTCCTCT | 24.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'G', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'W'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'K', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'Q', '109 ': 'P', '110 ': 'G', '111 ': 'Y', '111A': 'S', '111B': 'S', '111C': 'S', '111D': 'W', '112E': 'N', '112D': 'V', '112C': 'P', '112B': 'T', '112A': 'A', '112 ': 'W', '113 ': 'S', '114 ': 'S', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTTCTAACCGA-1_contig_2 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACCTTGGCGGGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ5*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACCTTGGCGGGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACNNNNNNNNGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNLGGITFGQGTRLEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNXXXITFGQGTRLEIK | 1 | 279 | null | null | 288 | 325 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSN | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSN | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGCGTAGCAACCTTGGCGGGATCACC | QQRSNLGGIT | TGTCAGCAGCGTAGCAACCTTGGCGGGATCACCTTC | 36.0 | CQQRSNLGGITF | 12.0 | 436.549 | null | 73.749 | 107S279M182S8N | null | 394S38M136S | 2.5530000000000002e-124 | null | 3.483e-17 | 100.0 | null | 100.0 | 108 | 386 | 1 | 279 | null | null | null | null | 395 | 432 | 1 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 402.0 | 431.0 | 372.0 | 401.0 | CTTGGCGG | 8 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '113 ': 'L', '114 ': 'G', '115 ': 'G', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTTCTATCCTA-1_contig_2 | TATAGGGGGACTCCTGTGCCCCACCATGGACACACTTTGCTACACACTCCTGCTGCTGACCACCCCTTCCTGGGTCTTGTCCCAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGACCCGAAGTGGGAGCTACCAACTTGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-26*01 | IGHD1-26*01 | IGHJ5*02 | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGACCCGAAGTGGGAGCTACCAACTTGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGANNNNNAGTGGGAGCTACNNNNNNNNNTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTRSGSYQLGWFDPWGQGTLVTVSS | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARXXSGSYXXXWFDPWGQGTLVTVSS | 1 | 298 | 304.0 | 315.0 | 325 | 370 | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGA | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCAR | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGA | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCAR | AGTGGGAGCTAC | SGSY | AGTGGGAGCTAC | SGSY | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCT | QVTLKESGPVLVKPTETLTLTCTVS | GGGTTCTCACTCAGCAATGCTAGAATGGGT | GFSLSNARMG | GTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACAC | VSWIRQPPGKALEWLAH | ATTTTTTCGAATGACGAAAAA | IFSNDEK | TCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | SYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACGGACCCGAAGTGGGAGCTACCAACTTGGGTGGTTCGACCCC | ARTRSGSYQLGWFDP | TGTGCACGGACCCGAAGTGGGAGCTACCAACTTGGGTGGTTCGACCCCTGG | 51.0 | CARTRSGSYQLGWFDPW | 17.0 | 466.153 | 23.76 | 89.131 | 82S298M143S3N | 385S5N12M126S3N | 406S5N46M71S | 2.867e-133 | 0.01647 | 7.500999999999999e-22 | 100.0 | 100.0 | 100.0 | 83 | 380 | 1 | 298 | 386.0 | 397.0 | 6.0 | 17.0 | 407 | 452 | 6 | 51 | 83 | 157 | 158 | 187 | 188 | 238 | 239 | 259 | 260 | 373 | 419.0 | 451.0 | 374.0 | 418.0 | CCCGA | 5 | CAACTTGGG | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'V', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'N', '35 ': 'A', '36 ': 'R', '37 ': 'M', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'H'}, 'cdrh2': {'56 ': 'I', '57 ': 'F', '58 ': 'S', '59 ': 'N', '63 ': 'D', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'S', '69 ': 'T', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'T', '108 ': 'R', '109 ': 'S', '110 ': 'G', '111 ': 'S', '111A': 'Y', '112A': 'Q', '112 ': 'L', '113 ': 'G', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTTCTATCCTA-1_contig_1 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ1*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPWTFGQGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPWTFGQGTKVEIK | 1 | 303 | null | null | 304 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCT | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCT | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAATATTATAGTACTCCTTGGACG | QQYYSTPWT | TGTCAGCAATATTATAGTACTCCTTGGACGTTC | 33.0 | CQQYYSTPWTF | 11.0 | 473.944 | null | 71.827 | 90S303M173S2N | null | 393S1N37M136S | 1.408e-135 | null | 1.316e-16 | 100.0 | null | 100.0 | 91 | 393 | 1 | 303 | null | null | null | null | 394 | 430 | 2 | 38 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 400.0 | 429.0 | 373.0 | 399.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTTCTCGCTTG-1_contig_1 | GGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCCATGACTACAGTAACTACGCGTTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD4-4*01 | IGHJ5*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCCATGACTACAGTAACTACGCGTTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGNNNTGACTACAGTAACTACNNNNTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARAMTTVTTRWFDPWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXTTVTTXWFDPWGQGTLVTVSS | 1 | 298 | 302.0 | 317.0 | 322 | 367 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TGACTACAGTAACTAC | TTVTT | TGACTACAGTAACTAC | TTVTT | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGCCATGACTACAGTAACTACGCGTTGGTTCGACCCC | ARAMTTVTTRWFDP | TGTGCGAGAGCCATGACTACAGTAACTACGCGTTGGTTCGACCCCTGG | 48.0 | CARAMTTVTTRWFDPW | 16.0 | 466.153 | 31.45 | 89.131 | 119S298M140S1N | 420S16M121S | 440S5N46M71S | 3.0639999999999998e-133 | 8.501e-05 | 7.998999999999999e-22 | 100.0 | 100.0 | 100.0 | 120 | 417 | 1 | 298 | 421.0 | 436.0 | 1.0 | 16.0 | 441 | 486 | 6 | 51 | 120 | 194 | 195 | 224 | 225 | 275 | 276 | 296 | 297 | 410 | 453.0 | 485.0 | 411.0 | 452.0 | CCA | 3 | GCGT | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'M', '109 ': 'T', '110 ': 'T', '111 ': 'V', '112A': 'T', '112 ': 'T', '113 ': 'R', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTTCTCGCTTG-1_contig_2 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1D-12*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPPYTFGQGTKLEIK | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPPYTFGQGTKLEIK | 1 | 287 | null | null | 288 | 325 | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPP | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSVSASVGDRVTITCRAS | CAGGGTATTAGCAGCTGG | QGISSW | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGGCTAACAGTTTCCCTCCGTACACT | QQANSFPPYT | TGTCAACAGGCTAACAGTTTCCCTCCGTACACTTTT | 36.0 | CQQANSFPPYTF | 12.0 | 449.014 | null | 73.749 | 93S287M174S | null | 380S1N38M136S | 4.398e-128 | null | 3.396e-17 | 100.0 | null | 100.0 | 94 | 380 | 1 | 287 | null | null | null | null | 381 | 418 | 2 | 39 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 388.0 | 417.0 | 358.0 | 387.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'A', '108 ': 'N', '109 ': 'S', '113 ': 'F', '114 ': 'P', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTGGTTCTGAAAGA-1_contig_1 | ACAACCACACCCCTCCTAAGAAGAAGCCCCTAGACCACAGCTCCACACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGGTCGGCGATTTGGGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV7-4-1*02 | IGHD3-16*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGGTCGGCGATTTGGGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGNNNNNNNNTTTGGGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARSAIWDYYYYGMDVWGQGTTVTVSS | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAXXXXWDYYYYGMDVWGQGTTVTVSS | 1 | 293 | 302.0 | 307.0 | 308 | 366 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAG | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCA | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAG | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCA | TTTGGG | W | TTTGGG | W | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGSELKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MNWVRQAPGQGLEWMGW | ATCAACACCAACACTGGGAACCCA | INTNTGNP | ACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGT | TYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGGTCGGCGATTTGGGACTACTACTACTACGGTATGGACGTC | ARSAIWDYYYYGMDV | TGTGCGAGGTCGGCGATTTGGGACTACTACTACTACGGTATGGACGTCTGG | 51.0 | CARSAIWDYYYYGMDVW | 17.0 | 458.363 | 12.223 | 114.126 | 106S293M145S3N | 407S14N6M131S17N | 413S3N59M72S | 6.618e-131 | 50.92 | 2.3349999999999998e-29 | 100.0 | 100.0 | 100.0 | 107 | 399 | 1 | 293 | 408.0 | 413.0 | 15.0 | 20.0 | 414 | 472 | 4 | 62 | 107 | 181 | 182 | 205 | 206 | 256 | 257 | 280 | 281 | 394 | 440.0 | 472.0 | 395.0 | 439.0 | GTCGGCGA | 8 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'S', '11 ': 'E', '12 ': 'L', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'T', '59 ': 'N', '62 ': 'T', '63 ': 'G', '64 ': 'N', '65 ': 'P'}, 'fwh3': {'66 ': 'T', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'G', '71 ': 'F', '72 ': 'T', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'V', '78 ': 'F', '79 ': 'S', '80 ': 'L', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'V', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'A', '109 ': 'I', '110 ': 'W', '111 ': 'D', '111A': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTGGTTCTGAAAGA-1_contig_2 | GGGAGGAATCAGTCCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-17*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPPTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPPTFGQGTKVEIK | 1 | 287 | null | null | 288 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTAT | LGWYQQKPGKAPKRLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CTACAGCATAATAGTTACCCTCCGACG | LQHNSYPPT | TGTCTACAGCATAATAGTTACCCTCCGACGTTC | 33.0 | CLQHNSYPPTF | 11.0 | 449.014 | null | 67.981 | 96S287M171S | null | 383S3N35M136S | 4.398e-128 | null | 1.851e-15 | 100.0 | null | 100.0 | 97 | 383 | 1 | 287 | null | null | null | null | 384 | 418 | 4 | 38 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 388.0 | 417.0 | 361.0 | 387.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'H', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCAGACGACGT-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATGGAGCGGAGTGGCTACGATTTGGAGGGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD5-12*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATGGAGCGGAGTGGCTACGATTTGGAGGGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNAGTGGCTACGATTNNNNNNNNNNTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDGAEWLRFGGGYFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXWLRXXXXYFDYWGQGTLVTVSS | 1 | 296 | 305.0 | 317.0 | 328 | 373 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | AGTGGCTACGATT | WLR | AGTGGCTACGATT | WLR | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATGGAGCGGAGTGGCTACGATTTGGAGGGGGTTACTTTGACTAC | ARDGAEWLRFGGGYFDY | TGTGCGAGAGATGGAGCGGAGTGGCTACGATTTGGAGGGGGTTACTTTGACTACTGG | 57.0 | CARDGAEWLRFGGGYFDYW | 19.0 | 463.037 | 25.682 | 89.131 | 124S296M148S | 428S8N13M127S2N | 451S2N46M71S | 2.7120000000000002e-132 | 0.004726 | 8.159999999999999e-22 | 100.0 | 100.0 | 100.0 | 125 | 420 | 1 | 296 | 429.0 | 441.0 | 9.0 | 21.0 | 452 | 497 | 3 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 464.0 | 496.0 | 413.0 | 463.0 | TGGAGCGG | 8 | TGGAGGGGGT | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'G', '109 ': 'A', '110 ': 'E', '111 ': 'W', '111A': 'L', '111B': 'R', '112B': 'F', '112A': 'G', '112 ': 'G', '113 ': 'G', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCAGACGACGT-1_contig_1 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCGAGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ1*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCGAGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCNNGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTXVFGTGTKVTVL | 1 | 295 | null | null | 298 | 331 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTC | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSST | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTC | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSST | null | null | null | null | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | AGCTCATATACAAGCAGCAGCACTCGAGTC | SSYTSSSTRV | TGCAGCTCATATACAAGCAGCAGCACTCGAGTCTTC | 36.0 | CSSYTSSSTRVF | 12.0 | 461.479 | null | 66.059 | 98S295M247S2N | null | 395S4N34M211S | 9.003e-132 | null | 8.127e-15 | 100.0 | null | 100.0 | 99 | 393 | 1 | 295 | null | null | null | null | 396 | 429 | 5 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | GA | 2 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '113 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCAGGCATGTG-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGAAGAGGGAGCAGCAGCTGGTCCCTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD6-13*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGAAGAGGGAGCAGCAGCTGGTCCCTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNAGCAGCAGCTGGTNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREEGAAAGPSFDYWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXAAAGXXFDYWGQGTLVTVSS | 1 | 299 | 306.0 | 318.0 | 324 | 367 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | AGCAGCAGCTGGT | AAAG | AGCAGCAGCTGGT | AAAG | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAAGAGGGAGCAGCAGCTGGTCCCTCCTTTGACTAC | AREEGAAAGPSFDY | TGTGCGAGAGAAGAGGGAGCAGCAGCTGGTCCCTCCTTTGACTACTGG | 48.0 | CAREEGAAAGPSFDYW | 16.0 | 467.712 | 25.682 | 85.286 | 92S299M139S | 397S6N13M120S2N | 415S4N44M71S | 9.875e-134 | 0.004404 | 1.0930000000000001e-20 | 100.0 | 100.0 | 100.0 | 93 | 391 | 1 | 299 | 398.0 | 410.0 | 7.0 | 19.0 | 416 | 459 | 5 | 48 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 426.0 | 458.0 | 384.0 | 425.0 | AGAGGG | 6 | CCCTC | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'E', '109 ': 'G', '110 ': 'A', '111 ': 'A', '112A': 'A', '112 ': 'G', '113 ': 'P', '114 ': 'S', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCAGGCATGTG-1_contig_2 | AGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCTTGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCTTGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCNNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXLTFGGGTKVEIK | 1 | 282 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGAGTTACAGTACCTTGCTCACT | QQSYSTLLT | TGTCAACAGAGTTACAGTACCTTGCTCACTTTC | 33.0 | CQQSYSTLLTF | 11.0 | 441.224 | null | 73.749 | 93S282M176S5N | null | 377S38M136S | 9.683e-126 | null | 3.377e-17 | 100.0 | null | 100.0 | 94 | 375 | 1 | 282 | null | null | null | null | 378 | 415 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | TT | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'L', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCCAAACGCGA-1_contig_1 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGCACCCCTCGGGTTTGGAGTGGCACTACCTCCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD3-3*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGCACCCCTCGGGTTTGGAGTGGCACTACCTCCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGNNNNNNNNNNNTTTGGAGTGGNNNNNNNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCASTPRVWSGTTSYDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAXXXXXWSGXXXXDYWGQGTLVTVSS | 1 | 293 | 305.0 | 314.0 | 327 | 367 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA | TTTGGAGTGG | WSG | TTTGGAGTGG | WSG | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGCACCCCTCGGGTTTGGAGTGGCACTACCTCCTATGACTAC | ASTPRVWSGTTSYDY | TGTGCGAGCACCCCTCGGGTTTGGAGTGGCACTACCTCCTATGACTACTGG | 51.0 | CASTPRVWSGTTSYDYW | 17.0 | 458.363 | 19.914 | 79.518 | 136S293M145S3N | 440S11N10M124S10N | 462S7N41M71S | 6.964000000000005e-131 | 0.2603 | 6.461e-19 | 100.0 | 100.0 | 100.0 | 137 | 429 | 1 | 293 | 441.0 | 450.0 | 12.0 | 21.0 | 463 | 503 | 8 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 470.0 | 502.0 | 425.0 | 469.0 | CACCCCTCGGG | 11 | CACTACCTCCTA | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'T', '108 ': 'P', '109 ': 'R', '110 ': 'V', '111 ': 'W', '111A': 'S', '112A': 'G', '112 ': 'T', '113 ': 'T', '114 ': 'S', '115 ': 'Y', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCCAAACGCGA-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLVFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLVFGGGTKLTVL | 1 | 296 | null | null | 297 | 331 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTL | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATACAAGCAGCAGCACTCTGGTA | SSYTSSSTLV | TGCAGCTCATATACAAGCAGCAGCACTCTGGTATTC | 36.0 | CSSYTSSSTLVF | 12.0 | 463.037 | null | 67.981 | 98S296M246S1N | null | 394S3N35M211S | 3.057e-132 | null | 2.144e-15 | 100.0 | null | 100.0 | 99 | 394 | 1 | 296 | null | null | null | null | 395 | 429 | 4 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '113 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCCAGACTCGC-1_contig_2 | GGGAGAGGAGCCCAGCACTGGGATTCCGAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTTGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGAAACAAGTATAGCAGCAGCTTAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-53*04 | IGHD6-13*01 | IGHJ5*02 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGAAACAAGTATAGCAGCAGCTTAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGANNNNNGTATAGCAGCAGCTNNAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARNKYSSSLNWFDPWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARXXYSSSXNWFDPWGQGTLVTVSS | 1 | 291 | 297.0 | 310.0 | 313 | 361 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCAR | GTATAGCAGCAGCT | YSSS | GTATAGCAGCAGCT | YSSS | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGGTTCACCGTCAGTAGCAACTAC | GFTVSSNY | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTT | MSWVRQAPGKGLEWVSV | ATTTATAGCGGTGGTAGCACA | IYSGGST | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGACACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAAACAAGTATAGCAGCAGCTTAAACTGGTTCGACCCC | ARNKYSSSLNWFDP | TGTGCGAGAAACAAGTATAGCAGCAGCTTAAACTGGTTCGACCCCTGG | 48.0 | CARNKYSSSLNWFDPW | 16.0 | 455.247 | 27.605 | 94.899 | 130S291M141S2N | 426S2N14M122S5N | 442S2N49M71S | 5.939e-130 | 0.001233 | 1.4809999999999998e-23 | 100.0 | 100.0 | 100.0 | 131 | 421 | 1 | 291 | 427.0 | 440.0 | 3.0 | 16.0 | 443 | 491 | 3 | 51 | 131 | 205 | 206 | 229 | 230 | 280 | 281 | 301 | 302 | 415 | 458.0 | 490.0 | 416.0 | 457.0 | AACAA | 5 | TA | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'V', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'S', '59 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'H', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'N', '108 ': 'K', '109 ': 'Y', '110 ': 'S', '111 ': 'S', '112A': 'S', '112 ': 'L', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCCAGACTCGC-1_contig_1 | AGAGCTCTGGGGAGTCTGCACCATGGCTTGGACTCCACTCCTCTTCCTCACCCTCCTCCTCCACTGCACAGGGTCTCTCTCCCAGCTTGTGCTGACTCAATCGCCCTCTGCCTCTGCCTCCCTGGGAGCCTCGGTCAAGCTCACCTGCACTCTGAGCAGTGGGCACAGCAGCTACGCCATCGCATGGCATCAGCAGCAGCCAGAGAAGGGCCCTCGGTACTTGATGAAGCTTAACAGTGATGGCAGCCACAGCAAGGGGGACGGGATCCCTGATCGCTTCTCAGGCTCCAGCTCTGGGGCTGAGCGCTACCTCACCATCTCCAGCCTCCAGTCTGAGGATGAGGCTGACTATTACTGTCAGACCTGGGGCACTGGCCTTAATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV4-69*01 | null | IGLJ3*02 | CAGCTTGTGCTGACTCAATCGCCCTCTGCCTCTGCCTCCCTGGGAGCCTCGGTCAAGCTCACCTGCACTCTGAGCAGTGGGCACAGCAGCTACGCCATCGCATGGCATCAGCAGCAGCCAGAGAAGGGCCCTCGGTACTTGATGAAGCTTAACAGTGATGGCAGCCACAGCAAGGGGGACGGGATCCCTGATCGCTTCTCAGGCTCCAGCTCTGGGGCTGAGCGCTACCTCACCATCTCCAGCCTCCAGTCTGAGGATGAGGCTGACTATTACTGTCAGACCTGGGGCACTGGCCTTAATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGCTTGTGCTGACTCAATCGCCCTCTGCCTCTGCCTCCCTGGGAGCCTCGGTCAAGCTCACCTGCACTCTGAGCAGTGGGCACAGCAGCTACGCCATCGCATGGCATCAGCAGCAGCCAGAGAAGGGCCCTCGGTACTTGATGAAGCTTAACAGTGATGGCAGCCACAGCAAGGGGGACGGGATCCCTGATCGCTTCTCAGGCTCCAGCTCTGGGGCTGAGCGCTACCTCACCATCTCCAGCCTCCAGTCTGAGGATGAGGCTGACTATTACTGTCAGACCTGGGGCACTGGCATTNNTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QLVLTQSPSASASLGASVKLTCTLSSGHSSYAIAWHQQQPEKGPRYLMKLNSDGSHSKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGTGLNWVFGGGTKLTVL | QLVLTQSPSASASLGASVKLTCTLSSGHSSYAIAWHQQQPEKGPRYLMKLNSDGSHSKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGTGIXWVFGGGTKLTVL | 1 | 297 | null | null | 300 | 337 | CAGCTTGTGCTGACTCAATCGCCCTCTGCCTCTGCCTCCCTGGGAGCCTCGGTCAAGCTCACCTGCACTCTGAGCAGTGGGCACAGCAGCTACGCCATCGCATGGCATCAGCAGCAGCCAGAGAAGGGCCCTCGGTACTTGATGAAGCTTAACAGTGATGGCAGCCACAGCAAGGGGGACGGGATCCCTGATCGCTTCTCAGGCTCCAGCTCTGGGGCTGAGCGCTACCTCACCATCTCCAGCCTCCAGTCTGAGGATGAGGCTGACTATTACTGTCAGACCTGGGGCACTGGCCTT | QLVLTQSPSASASLGASVKLTCTLSSGHSSYAIAWHQQQPEKGPRYLMKLNSDGSHSKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGTGL | CAGCTTGTGCTGACTCAATCGCCCTCTGCCTCTGCCTCCCTGGGAGCCTCGGTCAAGCTCACCTGCACTCTGAGCAGTGGGCACAGCAGCTACGCCATCGCATGGCATCAGCAGCAGCCAGAGAAGGGCCCTCGGTACTTGATGAAGCTTAACAGTGATGGCAGCCACAGCAAGGGGGACGGGATCCCTGATCGCTTCTCAGGCTCCAGCTCTGGGGCTGAGCGCTACCTCACCATCTCCAGCCTCCAGTCTGAGGATGAGGCTGACTATTACTGTCAGACCTGGGGCACTGGCATT | QLVLTQSPSASASLGASVKLTCTLSSGHSSYAIAWHQQQPEKGPRYLMKLNSDGSHSKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGTGI | null | null | null | null | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | CAGCTTGTGCTGACTCAATCGCCCTCTGCCTCTGCCTCCCTGGGAGCCTCGGTCAAGCTCACCTGCACTCTGAGC | QLVLTQSPSASASLGASVKLTCTLS | AGTGGGCACAGCAGCTACGCC | SGHSSYA | ATCGCATGGCATCAGCAGCAGCCAGAGAAGGGCCCTCGGTACTTGATGAAG | IAWHQQQPEKGPRYLMK | CTTAACAGTGATGGCAGCCAC | LNSDGSH | AGCAAGGGGGACGGGATCCCTGATCGCTTCTCAGGCTCCAGCTCTGGGGCTGAGCGCTACCTCACCATCTCCAGCCTCCAGTCTGAGGATGAGGCTGACTATTACTGT | SKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGACCTGGGGCACTGGCCTTAATTGGGTG | QTWGTGLNWV | TGTCAGACCTGGGGCACTGGCCTTAATTGGGTGTTC | 36.0 | CQTWGTGLNWVF | 12.0 | 461.479 | null | 73.749 | 82S297M251S2N | null | 381S38M211S | 8.856000000000001e-132 | null | 3.871e-17 | 99.663 | null | 100.0 | 83 | 379 | 1 | 297 | null | null | null | null | 382 | 419 | 1 | 38 | 83 | 157 | 158 | 178 | 179 | 229 | 230 | 250 | 251 | 358 | 389.0 | 418.0 | 359.0 | 388.0 | AA | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'L', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'L', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'G', '29 ': 'H', '30 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwl2': {'39 ': 'I', '40 ': 'A', '41 ': 'W', '42 ': 'H', '43 ': 'Q', '44 ': 'Q', '45 ': 'Q', '46 ': 'P', '47 ': 'E', '48 ': 'K', '49 ': 'G', '50 ': 'P', '51 ': 'R', '52 ': 'Y', '53 ': 'L', '54 ': 'M', '55 ': 'K'}, 'cdrl2': {'56 ': 'L', '57 ': 'N', '58 ': 'S', '59 ': 'D', '63 ': 'G', '64 ': 'S', '65 ': 'H'}, 'fwl3': {'66 ': 'S', '67 ': 'K', '68 ': 'G', '69 ': 'D', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'A', '86 ': 'E', '87 ': 'R', '88 ': 'Y', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'T', '107 ': 'W', '108 ': 'G', '109 ': 'T', '113 ': 'G', '114 ': 'L', '115 ': 'N', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCCATCGGACC-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAAGCGATATTGTACTAATGGTGTATCACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD2-8*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAAGCGATATTGTACTAATGGTGTATCACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAANNNGATATTGTACTAATGGTGTATNACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKSDIVLMVYHYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXDIVLMVYXYGMDVWGQGTTVTVSS | 1 | 294 | 298.0 | 318.0 | 320 | 369 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GATATTGTACTAATGGTGTAT | DIVLMVY | GATATTGTACTAATGGTGTAT | DIVLMVY | ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAAAAGCGATATTGTACTAATGGTGTATCACTACGGTATGGACGTC | AKSDIVLMVYHYGMDV | TGTGCGAAAAGCGATATTGTACTAATGGTGTATCACTACGGTATGGACGTCTGG | 54.0 | CAKSDIVLMVYHYGMDVW | 18.0 | 459.921 | 41.064 | 96.822 | 137S294M147S2N | 434S2N21M123S8N | 456S12N50M72S | 2.382e-131 | 1.127e-07 | 4.02e-24 | 100.0 | 100.0 | 100.0 | 138 | 431 | 1 | 294 | 435.0 | 455.0 | 3.0 | 23.0 | 457 | 506 | 13 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 474.0 | 506.0 | 426.0 | 473.0 | AGC | 3 | C | 1.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'S', '108 ': 'D', '109 ': 'I', '110 ': 'V', '111 ': 'L', '111A': 'M', '112B': 'V', '112A': 'Y', '112 ': 'H', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCCATCGGACC-1_contig_1 | GCTGTGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTGTCTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ1*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTGTCTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTNNNTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGVYVFGTGTKVTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGXYVFGTGTKVTVL | 1 | 282 | null | null | 286 | 322 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSG | null | null | null | null | TATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAATCAGCAGACAGCAGTGGTGTCTATGTC | QSADSSGVYV | TGTCAATCAGCAGACAGCAGTGGTGTCTATGTCTTC | 36.0 | CQSADSSGVYVF | 12.0 | 441.224 | null | 71.827 | 100S282M251S8N | null | 385S1N37M211S | 1.1139999999999999e-125 | null | 1.475e-16 | 100.0 | null | 100.0 | 101 | 382 | 1 | 282 | null | null | null | null | 386 | 422 | 2 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 392.0 | 421.0 | 362.0 | 391.0 | GTC | 3 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'G', '115 ': 'V', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCGTCATCCCT-1_contig_2 | TTATTTGGGGATGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACGGGGTAGCCGGTTTATCATTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD2-15*01 | IGHJ3*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACGGGGTAGCCGGTTTATCATTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACNNGGTAGCNNNNNNNNNNTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARRGSRFIIDIWGQGTMVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXGSXXXXDIWGQGTMVTVSS | 1 | 298 | 301.0 | 306.0 | 317 | 358 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GGTAGC | GS | GGTAGC | GS | TTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DIWGQGTMVTVSS | TTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DIWGQGTMVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGACGGGGTAGCCGGTTTATCATTGATATC | ARRGSRFIIDI | TGTGCGAGACGGGGTAGCCGGTTTATCATTGATATCTGG | 39.0 | CARRGSRFIIDIW | 13.0 | 466.153 | 12.223 | 81.44 | 104S298M131S1N | 404S16N6M123S9N | 420S8N42M71S | 2.925e-133 | 49.87 | 1.58e-19 | 100.0 | 100.0 | 100.0 | 105 | 402 | 1 | 298 | 405.0 | 410.0 | 17.0 | 22.0 | 421 | 462 | 9 | 50 | 105 | 179 | 180 | 209 | 210 | 260 | 261 | 281 | 282 | 395 | 429.0 | 461.0 | 396.0 | 428.0 | GG | 2 | CGGTTTATCA | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'G', '109 ': 'S', '110 ': 'R', '113 ': 'F', '114 ': 'I', '115 ': 'I', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCGTCATCCCT-1_contig_1 | AGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCTTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ2*01 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCTTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDLVVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDXVVFGGGTKLTVL | 1 | 286 | null | null | 288 | 325 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCTTGTGGTA | QVWDSSSDLVV | TGTCAGGTGTGGGATAGTAGTAGTGATCTTGTGGTATTC | 39.0 | CQVWDSSSDLVVF | 13.0 | 447.456 | null | 73.749 | 97S286M250S4N | null | 384S38M211S | 1.4819999999999999e-127 | null | 3.89e-17 | 100.0 | null | 100.0 | 98 | 383 | 1 | 286 | null | null | null | null | 385 | 422 | 1 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 392.0 | 421.0 | 359.0 | 391.0 | T | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'D', '115 ': 'L', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCGTTCATGGT-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCGTGAGATTCCCAGGAGTTTCCACTTGGTGATCAGCACTGAACACAGACCACCAACCATGGAGTTTGGGCTTAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAATGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGTTCCTCCTACGGTGACAAGGGAGAGTATGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-49*05 | IGHD4-17*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGTTCCTCCTACGGTGACAAGGGAGAGTATGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGNNNNNNCTACGGTGACNNNNNNNNNNNNNACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTSSSYGDKGEYDYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTXXXYGDXXXXXYYYYGMDVWGQGTTVTVSS | 1 | 299 | 306.0 | 315.0 | 329 | 387 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAG | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAG | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCT | CTACGGTGAC | YGD | CTACGGTGAC | YGD | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCT | EVQLVESGGGLVKPGRSLRLSCTAS | GGATTCACCTTTGGTGATTATGCT | GFTFGDYA | ATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTC | MSWFRQAPGKGLEWVGF | ATTAGAAGCAAAGCTTATGGTGGGACAACA | IRSKAYGGTT | GAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | EYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACTAGTTCCTCCTACGGTGACAAGGGAGAGTATGACTACTACTACTACGGTATGGACGTC | TSSSYGDKGEYDYYYYGMDV | TGTACTAGTTCCTCCTACGGTGACAAGGGAGAGTATGACTACTACTACTACGGTATGGACGTCTGG | 66.0 | CTSSSYGDKGEYDYYYYGMDVW | 22.0 | 467.712 | 19.914 | 114.126 | 137S299M160S3N | 442S3N10M144S3N | 465S3N59M72S | 1.1109999999999995e-133 | 0.2704 | 2.563e-29 | 100.0 | 100.0 | 100.0 | 138 | 436 | 1 | 299 | 443.0 | 452.0 | 4.0 | 13.0 | 466 | 524 | 4 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 492.0 | 524.0 | 432.0 | 491.0 | TTCCTC | 6 | AAGGGAGAGTATG | 13.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'F', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'F'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'Y', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'E', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'I', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'S', '107 ': 'S', '108 ': 'S', '109 ': 'Y', '110 ': 'G', '111 ': 'D', '111A': 'K', '111B': 'G', '111C': 'E', '112D': 'Y', '112C': 'D', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCGTTCATGGT-1_contig_2 | AGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTGTCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ2*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTGTCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTNNCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPVTFGQGTKLEIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPXTFGQGTKLEIK | 1 | 285 | null | null | 288 | 322 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCT | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCT | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | null | null | null | null | CACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | CACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGCTTAATAGTTACCCTGTCACT | QQLNSYPVT | TGTCAACAGCTTAATAGTTACCCTGTCACTTTT | 33.0 | CQQLNSYPVTF | 11.0 | 445.898 | null | 67.981 | 86S285M173S2N | null | 373S4N35M136S | 3.741e-127 | null | 1.816e-15 | 100.0 | null | 100.0 | 87 | 371 | 1 | 285 | null | null | null | null | 374 | 408 | 5 | 39 | 87 | 164 | 165 | 182 | 183 | 233 | 234 | 242 | 243 | 350 | 378.0 | 407.0 | 351.0 | 377.0 | GT | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'V', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCTCACAGGCC-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATATGGTGGGTGGTAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD6-19*01 | IGHJ5*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATATGGTGGGTGGTAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNGTGGCTGGTAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDMVGGNNWFDPWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXVAGNNWFDPWGQGTLVTVSS | 1 | 296 | 301.0 | 310.0 | 311 | 361 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GTGGGTGGTA | VGG | GTGGCTGGTA | VAG | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATATGGTGGGTGGTAACAACTGGTTCGACCCC | ARDMVGGNNWFDP | TGTGCGAGAGATATGGTGGGTGGTAACAACTGGTTCGACCCCTGG | 45.0 | CARDMVGGNNWFDPW | 15.0 | 463.037 | 14.146 | 98.744 | 137S296M136S | 437S10N10M122S1N | 447S51M71S | 2.717e-132 | 14.06 | 1.044e-24 | 100.0 | 90.0 | 100.0 | 138 | 433 | 1 | 296 | 438.0 | 447.0 | 11.0 | 20.0 | 448 | 498 | 1 | 51 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 465.0 | 497.0 | 426.0 | 464.0 | TATG | 4 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'M', '109 ': 'V', '110 ': 'G', '111 ': 'G', '112 ': 'N', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCTCACAGGCC-1_contig_1 | GTGGGCTCAGGAGGCAGAGCTCTGGGAATCTCACCATGGCCTGGACCCCTCTCCTGCTCCCCCTCCTCACTTTCTGCACAGTCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-10*01 | null | IGLJ2*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHRVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHRVFGGGTKLTVL | 1 | 290 | null | null | 291 | 325 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNH | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNH | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAAAAATAT | ALPKKY | GCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTAT | AYWYQQKSGQAPVLVIY | GAGGACAGC | EDS | AAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGT | KRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TACTCAACAGACAGCAGTGGTAATCATAGGGTA | YSTDSSGNHRV | TGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTC | 39.0 | CYSTDSSGNHRVF | 13.0 | 453.689 | null | 67.981 | 92S290M246S | null | 382S3N35M211S | 1.954e-129 | null | 2.103e-15 | 100.0 | null | 100.0 | 93 | 382 | 1 | 290 | null | null | null | null | 383 | 417 | 4 | 38 | 93 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 387.0 | 416.0 | 354.0 | 386.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'S', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'M', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'V', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Y', '106 ': 'S', '107 ': 'T', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'N', '115 ': 'H', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCTCAGTCCCT-1_contig_2 | TGGGGATGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATATTGGGGATGGCTACAATCTTGCGACGACCCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD5-12*01 | IGHJ4*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATATTGGGGATGGCTACAATCTTGCGACGACCCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACANNNNNNNNNTGGCTACNNNNNNNNNNNNNNNNACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARHIGDGYNLATTHFDYWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXGYXXXXXXFDYWGQGTLVTVSS | 1 | 299 | 309.0 | 315.0 | 332 | 376 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TGGCTAC | GY | TGGCTAC | GY | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGACATATTGGGGATGGCTACAATCTTGCGACGACCCACTTTGACTAC | ARHIGDGYNLATTHFDY | TGTGCGAGACATATTGGGGATGGCTACAATCTTGCGACGACCCACTTTGACTACTGG | 57.0 | CARHIGDGYNLATTHFDYW | 19.0 | 467.712 | 14.146 | 87.208 | 99S299M148S | 407S10N7M132S6N | 430S3N45M71S | 1.019e-133 | 13.48 | 2.972e-21 | 100.0 | 100.0 | 100.0 | 100 | 398 | 1 | 299 | 408.0 | 414.0 | 11.0 | 17.0 | 431 | 475 | 4 | 48 | 100 | 174 | 175 | 204 | 205 | 255 | 256 | 276 | 277 | 390 | 442.0 | 474.0 | 391.0 | 441.0 | TATTGGGGA | 9 | AATCTTGCGACGACCC | 16.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'H', '108 ': 'I', '109 ': 'G', '110 ': 'D', '111 ': 'G', '111A': 'Y', '111B': 'N', '112B': 'L', '112A': 'A', '112 ': 'T', '113 ': 'T', '114 ': 'H', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCTCAGTCCCT-1_contig_1 | ATCTCCTCCAGCAGCAGCCTCTGACTCTGCTGATTTGCATCATGGGCCGCTCTCTCCAGCAAGGGGATAAGAGAGGCCTGGGAGGAACCTGCTCAGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATTCTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ1*01 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATTCTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATNNTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDSYVFGTGTKVTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDXYVFGTGTKVTVL | 1 | 285 | null | null | 288 | 325 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | null | null | null | null | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAGGTGTGGGATAGTAGTAGTGATTCTTATGTC | QVWDSSSDSYV | TGTCAGGTGTGGGATAGTAGTAGTGATTCTTATGTCTTC | 39.0 | CQVWDSSSDSYVF | 13.0 | 445.898 | null | 73.749 | 191S285M251S5N | null | 478S38M211S | 5.042e-127 | null | 4.478e-17 | 100.0 | null | 100.0 | 192 | 476 | 1 | 285 | null | null | null | null | 479 | 516 | 1 | 38 | 192 | 266 | 267 | 284 | 285 | 335 | 336 | 344 | 345 | 452 | 486.0 | 515.0 | 453.0 | 485.0 | TC | 2 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'D', '115 ': 'S', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCTCGCCTGTT-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAACCCACCACGGTGGCCGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD4-17*01 | IGHJ3*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAACCCACCACGGTGGCCGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAANNNNNNACGGTGNNNGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKPTTVADAFDIWGQGTMVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXTVXDAFDIWGQGTMVTVSS | 1 | 294 | 301.0 | 306.0 | 310 | 358 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | ACGGTG | TV | ACGGTG | TV | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAAACCCACCACGGTGGCCGATGCTTTTGATATC | AKPTTVADAFDI | TGTGCGAAACCCACCACGGTGGCCGATGCTTTTGATATCTGG | 42.0 | CAKPTTVADAFDIW | 14.0 | 459.921 | 12.223 | 94.899 | 137S294M135S2N | 437S5N6M123S5N | 446S1N49M71S | 2.343e-131 | 53.02 | 1.492e-23 | 100.0 | 100.0 | 100.0 | 138 | 431 | 1 | 294 | 438.0 | 443.0 | 6.0 | 11.0 | 447 | 495 | 2 | 50 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 462.0 | 494.0 | 426.0 | 461.0 | CCCACC | 6 | GCC | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'P', '108 ': 'T', '109 ': 'T', '110 ': 'V', '112 ': 'A', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCTCGCCTGTT-1_contig_2 | GCTTTTGTACTCACTGGTTGTTTTTGCATAGGCCCCTCCAGGCCACGACCAGCTGTTTGGATTTTATAAACGGGCCGTTTGCATTGTGAACTGAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCCTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ2*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCCTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCNTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKLEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKLEIK | 1 | 302 | null | null | 304 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAATATTATAGTACTCCCTACACT | QQYYSTPYT | TGTCAGCAATATTATAGTACTCCCTACACTTTT | 33.0 | CQQYYSTPYTF | 11.0 | 472.386 | null | 71.827 | 182S302M174S3N | null | 485S2N37M136S | 4.828e-135 | null | 1.534e-16 | 100.0 | null | 100.0 | 183 | 484 | 1 | 302 | null | null | null | null | 486 | 522 | 3 | 39 | 183 | 260 | 261 | 296 | 297 | 347 | 348 | 356 | 357 | 464 | 492.0 | 521.0 | 465.0 | 491.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCTCTGTTGAG-1_contig_1 | ATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGGGGCGGATGGCCGCGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | null | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGGGGCGGATGGCCGCGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNNNNNACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREGADGRDYYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXXXXYYYYGMDVWGQGTTVTVSS | 1 | 293 | null | null | 311 | 369 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | null | null | null | null | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGAAGGGGCGGATGGCCGCGACTACTACTACTACGGTATGGACGTC | AREGADGRDYYYYGMDV | TGTGCGAGAGAAGGGGCGGATGGCCGCGACTACTACTACTACGGTATGGACGTCTGG | 57.0 | CAREGADGRDYYYYGMDVW | 19.0 | 458.363 | null | 114.126 | 94S293M148S | null | 404S3N59M72S | 6.503000000000005e-131 | null | 2.2959999999999998e-29 | 100.0 | null | 100.0 | 95 | 387 | 1 | 293 | null | null | null | null | 405 | 463 | 4 | 62 | 95 | 169 | 170 | 193 | 194 | 244 | 245 | 265 | 266 | 379 | 431.0 | 463.0 | 380.0 | 430.0 | AGGGGCGGATGGCCGCG | 17 | null | null | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'G', '109 ': 'A', '110 ': 'D', '111 ': 'G', '111A': 'R', '111B': 'D', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCTCTGTTGAG-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ1*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTYVFGTGTKVTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTYVFGTGTKVTVL | 1 | 294 | null | null | 295 | 331 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSST | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSST | null | null | null | null | TATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | AGCTCATATACAAGCAGCAGCACTTATGTC | SSYTSSSTYV | TGCAGCTCATATACAAGCAGCAGCACTTATGTCTTC | 36.0 | CSSYTSSSTYVF | 12.0 | 459.921 | null | 71.827 | 98S294M248S3N | null | 392S1N37M211S | 2.651e-131 | null | 1.491e-16 | 100.0 | null | 100.0 | 99 | 392 | 1 | 294 | null | null | null | null | 393 | 429 | 2 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | null | 0 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '113 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AACTTTCTCTTTAGGG-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGGCGTCTGAGTACTACAGTGGCTGGACTGGAGGCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*03 | IGHD6-19*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGGCGTCTGAGTACTACAGTGGCTGGACTGGAGGCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGNNNNNNNNNNNNNNCAGTGGCTGGNNNNNNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAASEYYSGWTGGYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXXXSGWXXXYYYYGMDVWGQGTTVTVSS | 1 | 291 | 306.0 | 315.0 | 324 | 381 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | CAGTGGCTGG | SGW | CAGTGGCTGG | SGW | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGGCGTCTGAGTACTACAGTGGCTGGACTGGAGGCTACTACTACTACGGTATGGACGTC | AASEYYSGWTGGYYYYGMDV | TGTGCGGCGTCTGAGTACTACAGTGGCTGGACTGGAGGCTACTACTACTACGGTATGGACGTCTGG | 66.0 | CAASEYYSGWTGGYYYYGMDVW | 22.0 | 455.247 | 19.914 | 112.203 | 137S291M162S5N | 442S8N10M138S3N | 460S4N58M72S | 6.215e-130 | 0.2677 | 9.618e-29 | 100.0 | 100.0 | 100.0 | 138 | 428 | 1 | 291 | 443.0 | 452.0 | 9.0 | 18.0 | 461 | 518 | 5 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 486.0 | 518.0 | 426.0 | 485.0 | GCGTCTGAGTACTA | 14 | ACTGGAGG | 8.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'A', '107 ': 'S', '108 ': 'E', '109 ': 'Y', '110 ': 'Y', '111 ': 'S', '111A': 'G', '111B': 'W', '111C': 'T', '112D': 'G', '112C': 'G', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AACTTTCTCTTTAGGG-1_contig_2 | CTGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ4*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEIK | 1 | 301 | null | null | 302 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCTC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | ATGCAAGCTCTACAAACCCCTCTCACT | MQALQTPLT | TGCATGCAAGCTCTACAAACCCCTCTCACTTTC | 33.0 | CMQALQTPLTF | 11.0 | 467.712 | null | 69.904 | 96S301M172S1N | null | 397S2N36M136S | 1.064e-133 | null | 5.016e-16 | 99.668 | null | 100.0 | 97 | 397 | 1 | 301 | null | null | null | null | 398 | 433 | 3 | 38 | 97 | 174 | 175 | 207 | 208 | 258 | 259 | 267 | 268 | 375 | 403.0 | 432.0 | 376.0 | 402.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTAGAATCTCC-1_contig_2 | GGGGGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGTTGGATATGTAGTGGTGGTAGCTGCTACTCCCCAAGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*01 | IGHD2-15*01 | IGHJ4*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGTTGGATATGTAGTGGTGGTAGCTGCTACTCCCCAAGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGNNNNNNNTGTAGTGGTGGTAGCTGCTACTCCNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHSWICSGGSCYSPSFDYWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHXXXCSGGSCYSXXFDYWGQGTLVTVSS | 1 | 299 | 307.0 | 330.0 | 337 | 379 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | TGTAGTGGTGGTAGCTGCTACTCC | CSGGSCYS | TGTAGTGGTGGTAGCTGCTACTCC | CSGGSCYS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGAATGATGATAAG | IYWNDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACAGTTGGATATGTAGTGGTGGTAGCTGCTACTCCCCAAGTTTTGACTAC | AHSWICSGGSCYSPSFDY | TGTGCACACAGTTGGATATGTAGTGGTGGTAGCTGCTACTCCCCAAGTTTTGACTACTGG | 60.0 | CAHSWICSGGSCYSPSFDYW | 20.0 | 467.712 | 46.832 | 83.363 | 78S299M151S2N | 384S7N24M120S | 414S5N43M71S | 9.836e-134 | 1.886e-09 | 4.128e-20 | 100.0 | 100.0 | 100.0 | 79 | 377 | 1 | 299 | 385.0 | 408.0 | 8.0 | 31.0 | 415 | 457 | 6 | 48 | 79 | 153 | 154 | 183 | 184 | 234 | 235 | 255 | 256 | 369 | 424.0 | 456.0 | 370.0 | 423.0 | TTGGATA | 7 | CCAAGT | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'N', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'S', '108 ': 'W', '109 ': 'I', '110 ': 'C', '111 ': 'S', '111A': 'G', '111B': 'G', '112C': 'S', '112B': 'C', '112A': 'Y', '112 ': 'S', '113 ': 'P', '114 ': 'S', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTAGAATCTCC-1_contig_1 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | 1 | 283 | null | null | 284 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTGTGGTA | QAWDSSTVV | TGTCAGGCGTGGGACAGCAGCACTGTGGTATTC | 33.0 | CQAWDSSTVVF | 11.0 | 442.782 | null | 69.904 | 94S283M247S2N | null | 377S2N36M211S | 3.727e-126 | null | 5.51e-16 | 100.0 | null | 100.0 | 95 | 377 | 1 | 283 | null | null | null | null | 378 | 413 | 3 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTAGATCGATA-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATTTTGCCTTGATAGTGGGAGCTACCGATGCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD1-26*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATTTTGCCTTGATAGTGGGAGCTACCGATGCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNNNNNNNNATAGTGGGAGCTACNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDFALIVGATDADYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXXIVGATXXDYWGQGTLVTVSS | 1 | 302 | 313.0 | 326.0 | 333 | 373 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | ATAGTGGGAGCTAC | IVGAT | ATAGTGGGAGCTAC | IVGAT | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACCACAGATTTTGCCTTGATAGTGGGAGCTACCGATGCTGACTAC | TTDFALIVGATDADY | TGTACCACAGATTTTGCCTTGATAGTGGGAGCTACCGATGCTGACTACTGG | 51.0 | CTTDFALIVGATDADYW | 17.0 | 472.386 | 27.605 | 79.518 | 137S302M142S | 449S3N14M118S3N | 469S7N41M71S | 4.2369999999999997e-135 | 0.001275 | 6.541e-19 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 450.0 | 463.0 | 4.0 | 17.0 | 470 | 510 | 8 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 477.0 | 509.0 | 432.0 | 476.0 | TTTTGCCTTG | 10 | CGATGC | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'D', '108 ': 'F', '109 ': 'A', '110 ': 'L', '111 ': 'I', '111A': 'V', '112A': 'G', '112 ': 'A', '113 ': 'T', '114 ': 'D', '115 ': 'A', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTAGATCGATA-1_contig_2 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGATCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | 1 | 283 | null | null | 284 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTGTGGTA | QAWDSSTVV | TGTCAGGCGTGGGACAGCAGCACTGTGGTATTC | 33.0 | CQAWDSSTVVF | 11.0 | 442.782 | null | 69.904 | 94S283M247S2N | null | 377S2N36M211S | 3.727e-126 | null | 5.51e-16 | 100.0 | null | 100.0 | 95 | 377 | 1 | 283 | null | null | null | null | 378 | 413 | 3 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTAGGATCGCA-1_contig_1 | ACTATAAAGCCGTTCGTATATGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTATATCGTGGTGGTGGCCCTGGGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD2-21*01 | IGHJ2*01 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTATATCGTGGTGGTGGCCCTGGGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGANNNATATTGTGGTGGTGNNNNNNNNTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDLYRGGGPGWYFDLWGRGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXYCGGXXXWYFDLWGRGTLVTVSS | 1 | 299 | 303.0 | 316.0 | 325 | 373 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | ATATCGTGGTGGTG | YRGG | ATATTGTGGTGGTG | YCGG | TGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | WYFDLWGRGTLVTVSS | TGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | WYFDLWGRGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCGTGGCACCCTGGTCACTGTCTCCTCA | WGRGTLVTVSS | GCGAGAGATCTATATCGTGGTGGTGGCCCTGGGTGGTACTTCGATCTC | ARDLYRGGGPGWYFDL | TGTGCGAGAGATCTATATCGTGGTGGTGGCCCTGGGTGGTACTTCGATCTCTGG | 54.0 | CARDLYRGGGPGWYFDLW | 18.0 | 467.712 | 21.837 | 94.899 | 140S299M145S | 442S3N14M128S11N | 464S4N49M71S | 1.088e-133 | 0.06987 | 1.54e-23 | 100.0 | 92.857 | 100.0 | 141 | 439 | 1 | 299 | 443.0 | 456.0 | 4.0 | 17.0 | 465 | 513 | 5 | 53 | 141 | 215 | 216 | 245 | 246 | 296 | 297 | 317 | 318 | 431 | 480.0 | 512.0 | 432.0 | 479.0 | TCT | 3 | GCCCTGGG | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'Y', '110 ': 'R', '111 ': 'G', '111A': 'G', '112B': 'G', '112A': 'P', '112 ': 'G', '113 ': 'W', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'L'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'R', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTAGGATCGCA-1_contig_2 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCCGCCAAATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ3*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCCGCCAAATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCNNNNNNATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPAKFTFGPGTKVDIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXXFTFGPGTKVDIK | 1 | 287 | null | null | 294 | 331 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAGCAGTATGGTAGCTCACCCGCCAAATTCACT | QQYGSSPAKFT | TGTCAGCAGTATGGTAGCTCACCCGCCAAATTCACTTTC | 39.0 | CQQYGSSPAKFTF | 13.0 | 449.014 | null | 73.749 | 104S287M180S3N | null | 397S38M136S | 4.5410000000000003e-128 | null | 3.502e-17 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 398 | 435 | 1 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | CGCCAA | 6 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '110 ': 'S', '113 ': 'P', '114 ': 'A', '115 ': 'K', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTAGGATGTAT-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCAAAAGATAGCAGCAGCTGGTACTACCCACAGCGAGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD6-13*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCAAAAGATAGCAGCAGCTGGTACTACCCACAGCGAGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGANNNNNNNATAGCAGCAGCTGGTACNNNNNNNNNNNNNACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSKDSSSWYYPQRDGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXSSSWYXXXXXGMDVWGQGTTVTVSS | 1 | 294 | 302.0 | 318.0 | 332 | 378 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | ATAGCAGCAGCTGGTAC | SSSWY | ATAGCAGCAGCTGGTAC | SSSWY | ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGATCAAAAGATAGCAGCAGCTGGTACTACCCACAGCGAGACGGTATGGACGTC | ARSKDSSSWYYPQRDGMDV | TGTGCGAGATCAAAAGATAGCAGCAGCTGGTACTACCCACAGCGAGACGGTATGGACGTCTGG | 63.0 | CARSKDSSSWYYPQRDGMDVW | 21.0 | 459.921 | 33.373 | 91.054 | 124S294M187S2N | 425S4N17M163S | 455S15N47M103S | 2.4990000000000003e-131 | 2.439e-05 | 2.295e-22 | 100.0 | 100.0 | 100.0 | 125 | 418 | 1 | 294 | 426.0 | 442.0 | 5.0 | 21.0 | 456 | 502 | 16 | 62 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 470.0 | 502.0 | 413.0 | 469.0 | TCAAAAG | 7 | TACCCACAGCGAG | 13.0 | GCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | IGHD | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'K', '109 ': 'D', '110 ': 'S', '111 ': 'S', '111A': 'S', '111B': 'W', '111C': 'Y', '112C': 'Y', '112B': 'P', '112A': 'Q', '112 ': 'R', '113 ': 'D', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTAGGATGTAT-1_contig_1 | AGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ2*01 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCATGTGGTA | QVWDSSSDHVV | TGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTC | 39.0 | CQVWDSSSDHVVF | 13.0 | 450.572 | null | 71.827 | 97S288M248S2N | null | 385S1N37M211S | 1.7090000000000002e-128 | null | 1.475e-16 | 100.0 | null | 100.0 | 98 | 385 | 1 | 288 | null | null | null | null | 386 | 422 | 2 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 392.0 | 421.0 | 359.0 | 391.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'D', '115 ': 'H', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTAGTACGATA-1_contig_1 | TGGGGACTCAACAACCACATCTGTCCTCTAGAGAAAACCCTGTGAGCACAGCTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAAGTGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGTAGGGTCGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-8*01 | IGHD3-16*02 | IGHJ5*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGTAGGGTCGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNTCGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARVGSFWFDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARXXSFWFDPWGQGTLVTVSS | 1 | 295 | 301.0 | 305.0 | 306 | 352 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCAR | TCGTT | S | TCGTT | S | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGTTATGAT | GYTFTSYD | ATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGG | INWVRQATGQGLEWMGW | ATGAACCCTAACAGTGGTAACACA | MNPNSGNT | GGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | GYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTAGGGTCGTTCTGGTTCGACCCC | ARVGSFWFDP | TGTGCGAGAGTAGGGTCGTTCTGGTTCGACCCCTGG | 36.0 | CARVGSFWFDPW | 12.0 | 461.479 | 10.301 | 91.054 | 117S295M128S1N | 417S27N5M118S5N | 422S4N47M71S | 7.573000000000001e-132 | 191.6 | 2.0439999999999998e-22 | 100.0 | 100.0 | 100.0 | 118 | 412 | 1 | 295 | 418.0 | 422.0 | 28.0 | 32.0 | 423 | 469 | 5 | 51 | 118 | 192 | 193 | 216 | 217 | 267 | 268 | 291 | 292 | 405 | 436.0 | 468.0 | 406.0 | 435.0 | TAGGG | 5 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'D'}, 'fwh2': {'39 ': 'I', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'T', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'M', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'N', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'G', '109 ': 'S', '113 ': 'F', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTAGTACGATA-1_contig_2 | GCCCTTGGGGCTGAGCCCTTCTCTGGAAACCACACAGCTCCTCCTGCAGCAGCCCCTGACTGCTGATTTGCATCACGGGCCACTCTTTCCAGCAAGGGGATAAGAGAGGCCTGGAAGAACCTGCCCAGCCTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | 1 | 283 | null | null | 284 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTGTGGTA | QAWDSSTVV | TGTCAGGCGTGGGACAGCAGCACTGTGGTATTC | 33.0 | CQAWDSSTVVF | 11.0 | 442.782 | null | 69.904 | 223S283M247S2N | null | 506S2N36M211S | 4.535e-126 | null | 6.67e-16 | 100.0 | null | 100.0 | 224 | 506 | 1 | 283 | null | null | null | null | 507 | 542 | 3 | 38 | 224 | 298 | 299 | 316 | 317 | 367 | 368 | 376 | 377 | 484 | 512.0 | 541.0 | 485.0 | 511.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTCAACTTGAC-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCAGGGGGTCTATTACTATGATAGTAGTGGTTATTTACCCCATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ3*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCAGGGGGTCTATTACTATGATAGTAGTGGTTATTTACCCCATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNNNNNNNNTATTACTATGATAGTAGTGGTTATTNNNNNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDQGVYYYDSSGYLPHDAFDIWGQGTMVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXYYYDSSGYXXXDAFDIWGQGTMVTVSS | 1 | 296 | 307.0 | 331.0 | 339 | 388 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TATTACTATGATAGTAGTGGTTATT | YYYDSSGY | TATTACTATGATAGTAGTGGTTATT | YYYDSSGY | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAAAGATCAGGGGGTCTATTACTATGATAGTAGTGGTTATTTACCCCATGATGCTTTTGATATC | AKDQGVYYYDSSGYLPHDAFDI | TGTGCGAAAGATCAGGGGGTCTATTACTATGATAGTAGTGGTTATTTACCCCATGATGCTTTTGATATCTGG | 72.0 | CAKDQGVYYYDSSGYLPHDAFDIW | 24.0 | 463.037 | 48.755 | 96.822 | 136S296M163S | 442S1N25M128S5N | 474S50M71S | 2.832e-132 | 5.617e-10 | 4.141e-24 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 443.0 | 467.0 | 2.0 | 26.0 | 475 | 524 | 1 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 491.0 | 523.0 | 425.0 | 490.0 | TCAGGGGGTC | 10 | TACCCCA | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'Q', '109 ': 'G', '110 ': 'V', '111 ': 'Y', '111A': 'Y', '111B': 'Y', '111C': 'D', '111D': 'S', '112E': 'S', '112D': 'G', '112C': 'Y', '112B': 'L', '112A': 'P', '112 ': 'H', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTCAACTTGAC-1_contig_1 | GCTGTGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATCGAGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ3*02 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATCGAGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATCNNGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYRVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYXVFGGGTKLTVL | 1 | 289 | null | null | 292 | 325 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATC | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATC | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | null | null | null | null | GTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAATCAGCAGACAGCAGTGGTACTTATCGAGTG | QSADSSGTYRV | TGTCAATCAGCAGACAGCAGTGGTACTTATCGAGTGTTC | 39.0 | CQSADSSGTYRVF | 13.0 | 452.13 | null | 66.059 | 100S289M247S1N | null | 391S4N34M211S | 5.831e-129 | null | 8.075e-15 | 100.0 | null | 100.0 | 101 | 389 | 1 | 289 | null | null | null | null | 392 | 425 | 5 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 395.0 | 424.0 | 362.0 | 394.0 | GA | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'T', '115 ': 'Y', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTCACCACGTG-1_contig_1 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATGGGGTAGAGATGGCTACAATCGGCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD5-12*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATGGGGTAGAGATGGCTACAATCGGCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNNTGGCTACNNNNNNNNACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDGVEMATIGDYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXXATXXXYYYGMDVWGQGTTVTVSS | 1 | 296 | 308.0 | 314.0 | 323 | 378 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TGGCTAC | AT | TGGCTAC | AT | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATGGGGTAGAGATGGCTACAATCGGCGACTACTACTACGGTATGGACGTC | ARDGVEMATIGDYYYGMDV | TGTGCGAGAGATGGGGTAGAGATGGCTACAATCGGCGACTACTACTACGGTATGGACGTCTGG | 63.0 | CARDGVEMATIGDYYYGMDVW | 21.0 | 463.037 | 14.146 | 108.358 | 136S296M154S | 443S10N7M136S6N | 458S6N56M72S | 2.7870000000000002e-132 | 14.49 | 1.373e-27 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 444.0 | 450.0 | 11.0 | 17.0 | 459 | 514 | 7 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 482.0 | 514.0 | 425.0 | 481.0 | TGGGGTAGAGA | 11 | AATCGGCG | 8.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'G', '109 ': 'V', '110 ': 'E', '111 ': 'M', '111A': 'A', '111B': 'T', '111C': 'I', '112C': 'G', '112B': 'D', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTCACCACGTG-1_contig_2 | TGGGGAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCCTCGGACG | QQSYSTPRT | TGTCAACAGAGTTACAGTACCCCTCGGACGTTC | 33.0 | CQQSYSTPRTF | 11.0 | 447.456 | null | 69.904 | 98S286M172S1N | null | 384S2N36M136S | 1.3e-127 | null | 4.899e-16 | 100.0 | null | 100.0 | 99 | 384 | 1 | 286 | null | null | null | null | 385 | 420 | 3 | 38 | 99 | 176 | 177 | 194 | 195 | 245 | 246 | 254 | 255 | 362 | 390.0 | 419.0 | 363.0 | 389.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTCACGGTAAG-1_contig_2 | AGTGCTTTCTGAGAGTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGTAGATATTGTAGTAGTACCAGCTGCTATCGCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-34*01 | IGHD2-2*01 | IGHJ6*02 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGTAGATATTGTAGTAGTACCAGCTGCTATCGCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGNNGATATTGTAGTAGTACCAGCTGCTATNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASRYCSSTSCYRYYYYGMDVWGQGTTVTVSS | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXYCSSTSCYXYYYYGMDVWGQGTTVTVSS | 1 | 290 | 293.0 | 318.0 | 321 | 378 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | GATATTGTAGTAGTACCAGCTGCTAT | YCSSTSCY | GATATTGTAGTAGTACCAGCTGCTAT | YCSSTSCY | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTAT | QVQLQQWGAGLLKPSETLSLTCAVY | GGTGGGTCCTTCAGTGGTTACTAC | GGSFSGYY | TGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWIRQPPGKGLEWIGE | ATCAATCATAGTGGAAGCACC | INHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGTAGATATTGTAGTAGTACCAGCTGCTATCGCTACTACTACTACGGTATGGACGTC | ASRYCSSTSCYRYYYYGMDV | TGTGCGAGTAGATATTGTAGTAGTACCAGCTGCTATCGCTACTACTACTACGGTATGGACGTCTGG | 66.0 | CASRYCSSTSCYRYYYYGMDVW | 22.0 | 453.689 | 50.677 | 112.203 | 95S290M160S3N | 387S2N26M132S3N | 415S4N58M72S | 1.693e-129 | 1.355e-10 | 8.87e-29 | 100.0 | 100.0 | 100.0 | 96 | 385 | 1 | 290 | 388.0 | 413.0 | 3.0 | 28.0 | 416 | 473 | 5 | 62 | 96 | 170 | 171 | 194 | 195 | 245 | 246 | 266 | 267 | 380 | 441.0 | 473.0 | 381.0 | 440.0 | TA | 2 | CG | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'Q', '7 ': 'W', '8 ': 'G', '9 ': 'A', '11 ': 'G', '12 ': 'L', '13 ': 'L', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'Y'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'F', '35 ': 'S', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'R', '108 ': 'Y', '109 ': 'C', '110 ': 'S', '111 ': 'S', '111A': 'T', '111B': 'S', '111C': 'C', '112D': 'Y', '112C': 'R', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTCACGGTAAG-1_contig_1 | GGGGAGAAGTCTCTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-27*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPRTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPRTFGQGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGCAATTAT | QGISNY | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTAT | LAWYQQKPGKVPKLLIY | GCTGCATCC | AAS | ACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAAAAGTATAACAGTGCCCCTCGGACG | QKYNSAPRT | TGTCAAAAGTATAACAGTGCCCCTCGGACGTTC | 33.0 | CQKYNSAPRTF | 11.0 | 447.456 | null | 69.904 | 97S286M172S1N | null | 383S2N36M136S | 1.2979999999999998e-127 | null | 4.89e-16 | 100.0 | null | 100.0 | 98 | 383 | 1 | 286 | null | null | null | null | 384 | 419 | 3 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'V', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'K', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'A', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTCATCACCCT-1_contig_2 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCAATATAGCAGTGGCTGGTACAGGGAGGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD6-19*01 | IGHJ5*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCAATATAGCAGTGGCTGGTACAGGGAGGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNTATAGCAGTGGCTGGTACNNNNNNNACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDQYSSGWYREDNWFDPWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXYSSGWYXXXNWFDPWGQGTLVTVSS | 1 | 296 | 301.0 | 318.0 | 326 | 376 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TATAGCAGTGGCTGGTAC | YSSGWY | TATAGCAGTGGCTGGTAC | YSSGWY | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCAATATAGCAGTGGCTGGTACAGGGAGGACAACTGGTTCGACCCC | ARDQYSSGWYREDNWFDP | TGTGCGAGAGATCAATATAGCAGTGGCTGGTACAGGGAGGACAACTGGTTCGACCCCTGG | 60.0 | CARDQYSSGWYREDNWFDPW | 20.0 | 463.037 | 35.296 | 98.744 | 136S296M151S | 436S3N18M129S | 461S51M71S | 2.772e-132 | 6.195e-06 | 1.07e-24 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 437.0 | 454.0 | 4.0 | 21.0 | 462 | 512 | 1 | 51 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 479.0 | 511.0 | 425.0 | 478.0 | TCAA | 4 | AGGGAGG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'Q', '109 ': 'Y', '110 ': 'S', '111 ': 'S', '111A': 'G', '111B': 'W', '112C': 'Y', '112B': 'R', '112A': 'E', '112 ': 'D', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTCATCACCCT-1_contig_1 | GGGAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPFTFGPGTKVDIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPFTFGPGTKVDIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGAGTTACAGTACCCCATTCACT | QQSYSTPFT | TGTCAACAGAGTTACAGTACCCCATTCACTTTC | 33.0 | CQQSYSTPFTF | 11.0 | 444.34 | null | 73.749 | 89S284M174S3N | null | 373S38M136S | 1.108e-126 | null | 3.352e-17 | 100.0 | null | 100.0 | 90 | 373 | 1 | 284 | null | null | null | null | 374 | 411 | 1 | 38 | 90 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 381.0 | 410.0 | 354.0 | 380.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTCATCGGAAG-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCAGGGGGGTATAACTGGAACAGGAGCCTATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD1-20*01 | IGHJ3*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCAGGGGGGTATAACTGGAACAGGAGCCTATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNGGTATAACTGGAACNNNNNNNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDQGGITGTGAYDAFDIWGQGTMVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARXXXGITGTXXXDAFDIWGQGTMVTVSS | 1 | 296 | 304.0 | 317.0 | 327 | 376 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | GGTATAACTGGAAC | GITGT | GGTATAACTGGAAC | GITGT | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGATCAGGGGGGTATAACTGGAACAGGAGCCTATGATGCTTTTGATATC | ARDQGGITGTGAYDAFDI | TGTGCGAGAGATCAGGGGGGTATAACTGGAACAGGAGCCTATGATGCTTTTGATATCTGG | 60.0 | CARDQGGITGTGAYDAFDIW | 20.0 | 463.037 | 27.605 | 96.822 | 115S296M151S | 418S14M130S3N | 441S50M71S | 2.682e-132 | 0.001233 | 3.907e-24 | 100.0 | 100.0 | 100.0 | 116 | 411 | 1 | 296 | 419.0 | 432.0 | 1.0 | 14.0 | 442 | 491 | 1 | 50 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 458.0 | 490.0 | 404.0 | 457.0 | TCAGGGG | 7 | AGGAGCCTA | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'Q', '109 ': 'G', '110 ': 'G', '111 ': 'I', '111A': 'T', '111B': 'G', '112C': 'T', '112B': 'G', '112A': 'A', '112 ': 'Y', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTCATCGGAAG-1_contig_2 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ4*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCNCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIK | 1 | 302 | null | null | 304 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAATATTATAGTACTCCCCTCACT | QQYYSTPLT | TGTCAGCAATATTATAGTACTCCCCTCACTTTC | 33.0 | CQQYYSTPLTF | 11.0 | 472.386 | null | 71.827 | 90S302M174S3N | null | 393S1N37M136S | 4.145e-135 | null | 1.316e-16 | 100.0 | null | 100.0 | 91 | 392 | 1 | 302 | null | null | null | null | 394 | 430 | 2 | 38 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 400.0 | 429.0 | 373.0 | 399.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTTCACTCTTA-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGAACTCACCATGGAGTTTGGACTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGATCGCATAGCAGCAGCTGAAGCTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-43*02 | IGHD6-13*01 | IGHJ6*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGATCGCATAGCAGCAGCTGAAGCTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGATNNNATAGCAGCAGCTGNNNNTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAKDRIAAAEAYYYYYGMDVWGQGTTVTVSS | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAKDXIAAAXXYYYYYGMDVWGQGTTVTVSS | 1 | 297 | 301.0 | 313.0 | 318 | 378 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAKD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAKD | ATAGCAGCAGCTG | IAAA | ATAGCAGCAGCTG | IAAA | TTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGVVQPGGSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTT | MHWVRQAPGKGLEWVSL | ATTAGTGGGGATGGTGGTAGCACA | ISGDGGST | TACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGT | YYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAAAGATCGCATAGCAGCAGCTGAAGCTTACTACTACTACTACGGTATGGACGTC | AKDRIAAAEAYYYYYGMDV | TGTGCAAAAGATCGCATAGCAGCAGCTGAAGCTTACTACTACTACTACGGTATGGACGTCTGG | 63.0 | CAKDRIAAAEAYYYYYGMDVW | 21.0 | 464.595 | 25.682 | 117.971 | 137S297M153S1N | 437S4N13M137S4N | 454S1N61M72S | 9.481999999999999e-133 | 0.004887 | 1.756e-30 | 100.0 | 100.0 | 100.0 | 138 | 434 | 1 | 297 | 438.0 | 450.0 | 5.0 | 17.0 | 455 | 515 | 2 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 483.0 | 515.0 | 426.0 | 482.0 | CGC | 3 | AAGC | 4.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'R', '109 ': 'I', '110 ': 'A', '111 ': 'A', '111A': 'A', '111B': 'E', '111C': 'A', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTTCACTCTTA-1_contig_1 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ5*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPITFGQGTRLEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPITFGQGTRLEIK | 1 | 299 | null | null | 300 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | ATGCAAGCTCTACAAACCCCGATCACC | MQALQTPIT | TGCATGCAAGCTCTACAAACCCCGATCACCTTC | 33.0 | CMQALQTPITF | 11.0 | 464.595 | null | 73.749 | 90S299M174S3N | null | 389S38M136S | 9.126e-133 | null | 3.452e-17 | 99.666 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 390 | 427 | 1 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTTCCACGTGG-1_contig_2 | GAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTCGTGTAGTAGTACCAGCTGCTATAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD2-2*02 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTCGTGTAGTAGTACCAGCTGCTATAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNTGTAGTAGTACCAGCTGCTATAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDSCSSTSCYNYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXCSSTSCYNYWGQGTLVTVSS | 1 | 296 | 301.0 | 322.0 | 323 | 361 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TGTAGTAGTACCAGCTGCTATA | CSSTSCY | TGTAGTAGTACCAGCTGCTATA | CSSTSCY | ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATTCGTGTAGTAGTACCAGCTGCTATAACTAC | ARDSCSSTSCYNY | TGTGCGAGAGATTCGTGTAGTAGTACCAGCTGCTATAACTACTGG | 45.0 | CARDSCSSTSCYNYW | 15.0 | 463.037 | 42.986 | 75.672 | 130S296M136S | 430S7N22M110S2N | 452S9N39M71S | 2.682e-132 | 2.889e-08 | 9.089e-18 | 100.0 | 100.0 | 100.0 | 131 | 426 | 1 | 296 | 431.0 | 452.0 | 8.0 | 29.0 | 453 | 491 | 10 | 48 | 131 | 205 | 206 | 229 | 230 | 280 | 281 | 304 | 305 | 418 | 458.0 | 490.0 | 419.0 | 457.0 | TTCG | 4 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'S', '109 ': 'C', '110 ': 'S', '111 ': 'S', '112 ': 'T', '113 ': 'S', '114 ': 'C', '115 ': 'Y', '116 ': 'N', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTTCCACGTGG-1_contig_1 | GGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCCTCTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCCTCTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCNNCTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPSFGPGTKVDIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPXFGPGTKVDIK | 1 | 284 | null | null | 287 | 319 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | CTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FGPGTKVDIK | CTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGTATGATAATCTCCCCTCT | QQYDNLPS | TGTCAACAGTATGATAATCTCCCCTCTTTC | 30.0 | CQQYDNLPSF | 10.0 | 444.34 | null | 64.136 | 97S284M171S3N | null | 383S5N33M136S | 1.119e-126 | null | 2.65e-14 | 100.0 | null | 100.0 | 98 | 381 | 1 | 284 | null | null | null | null | 384 | 416 | 6 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 386.0 | 415.0 | 362.0 | 385.0 | CT | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '114 ': 'N', '115 ': 'L', '116 ': 'P', '117 ': 'S'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTTCTGGTTCC-1_contig_1 | ATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCAGGGAGCTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD1-26*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCAGGGAGCTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGANNNNGGGAGCTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDPGSYYYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXGSYYYYYGMDVWGQGTTVTVSS | 1 | 293 | 298.0 | 303.0 | 304 | 363 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GGGAGC | GS | GGGAGC | GS | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCCAGGGAGCTACTACTACTACTACGGTATGGACGTC | ARDPGSYYYYYGMDV | TGTGCGAGAGATCCAGGGAGCTACTACTACTACTACGGTATGGACGTCTGG | 51.0 | CARDPGSYYYYYGMDVW | 17.0 | 458.363 | 12.223 | 116.049 | 94S293M142S | 391S8N6M132S6N | 397S2N60M72S | 6.426000000000005e-131 | 49.49 | 5.986e-30 | 100.0 | 100.0 | 100.0 | 95 | 387 | 1 | 293 | 392.0 | 397.0 | 9.0 | 14.0 | 398 | 457 | 3 | 62 | 95 | 169 | 170 | 193 | 194 | 244 | 245 | 265 | 266 | 379 | 425.0 | 457.0 | 380.0 | 424.0 | TCCA | 4 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'P', '109 ': 'G', '110 ': 'S', '111 ': 'Y', '111A': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTTCTGGTTCC-1_contig_2 | CTGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ2*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTKLEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTKLEIK | 1 | 299 | null | null | 300 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | ATGCAAGCTCTACAAACCCCGTACACT | MQALQTPYT | TGCATGCAAGCTCTACAAACCCCGTACACTTTT | 33.0 | CMQALQTPYTF | 11.0 | 464.595 | null | 73.749 | 96S299M174S3N | null | 395S1N38M136S | 9.228e-133 | null | 3.49e-17 | 99.666 | null | 100.0 | 97 | 395 | 1 | 299 | null | null | null | null | 396 | 433 | 2 | 39 | 97 | 174 | 175 | 207 | 208 | 258 | 259 | 267 | 268 | 375 | 403.0 | 432.0 | 376.0 | 402.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTTCTGTCCGT-1_contig_2 | AGCTCTGGGAGAAGAGCCCCAGCCCCAGAATTCCCAGGAGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTATAAAAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGGCTAGACCATATAGTGGCTACGATCGACTTCTCCGTAAGTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-11*01 | IGHD5-12*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGGCTAGACCATATAGTGGCTACGATCGACTTCTCCGTAAGTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGNNNNNNNNATATAGTGGCTACGATNNNNNNNNNNNNNNNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAARPYSGYDRLLRKWSDYWGQGTLVTVSS | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAXXXYSGYDXXXXXXXDYWGQGTLVTVSS | 1 | 291 | 300.0 | 315.0 | 336 | 376 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCG | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCG | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA | ATATAGTGGCTACGAT | YSGYD | ATATAGTGGCTACGAT | YSGYD | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTGACTACTAC | GFTFSDYY | ATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MSWIRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGGCTAGACCATATAGTGGCTACGATCGACTTCTCCGTAAGTGGTCTGACTAC | AARPYSGYDRLLRKWSDY | TGTGCGGCTAGACCATATAGTGGCTACGATCGACTTCTCCGTAAGTGGTCTGACTACTGG | 60.0 | CAARPYSGYDRLLRKWSDYW | 20.0 | 455.247 | 31.45 | 79.518 | 137S291M156S5N | 436S4N16M132S3N | 472S7N41M71S | 6.149e-130 | 8.92e-05 | 6.576e-19 | 100.0 | 100.0 | 100.0 | 138 | 428 | 1 | 291 | 437.0 | 452.0 | 5.0 | 20.0 | 473 | 513 | 8 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 480.0 | 512.0 | 426.0 | 479.0 | GCTAGACC | 8 | CGACTTCTCCGTAAGTGGTC | 20.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'A', '107 ': 'R', '108 ': 'P', '109 ': 'Y', '110 ': 'S', '111 ': 'G', '111A': 'Y', '111B': 'D', '112C': 'R', '112B': 'L', '112A': 'L', '112 ': 'R', '113 ': 'K', '114 ': 'W', '115 ': 'S', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTTCTGTCCGT-1_contig_1 | GGAGGAGTCAGACCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCGGGAACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-6*01 | null | IGKJ1*01 | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCGGGAACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCCNNNNACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYPGTFGQGTKVEIK | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYPXTFGQGTKVEIK | 1 | 284 | null | null | 289 | 322 | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYP | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAGATTACAATTACCC | AIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQDYNYP | null | null | null | null | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GCCATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | AIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LGWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTACAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGCACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CTACAAGATTACAATTACCCGGGAACG | LQDYNYPGT | TGTCTACAAGATTACAATTACCCGGGAACGTTC | 33.0 | CLQDYNYPGTF | 11.0 | 444.34 | null | 66.059 | 95S284M174S3N | null | 383S4N34M136S | 1.121e-126 | null | 7.003e-15 | 100.0 | null | 100.0 | 96 | 379 | 1 | 284 | null | null | null | null | 384 | 417 | 5 | 38 | 96 | 173 | 174 | 191 | 192 | 242 | 243 | 251 | 252 | 359 | 387.0 | 416.0 | 360.0 | 386.0 | GGGA | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'A', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'D', '108 ': 'Y', '109 ': 'N', '114 ': 'Y', '115 ': 'P', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGACCTTCTTGTTTG-1_contig_1 | ATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGCAGCGCAACCCCGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD6-25*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGCAGCGCAACCCCGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGNNGCAGCGNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGSATPYYFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXSXXXXYFDYWGQGTLVTVSS | 1 | 290 | 293.0 | 298.0 | 308 | 355 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | GCAGCG | S | GCAGCG | S | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGGGCAGCGCAACCCCGTACTACTTTGACTAC | ARGSATPYYFDY | TGTGCGAGGGGCAGCGCAACCCCGTACTACTTTGACTACTGG | 42.0 | CARGSATPYYFDYW | 14.0 | 453.689 | 12.223 | 92.976 | 94S290M136S3N | 386S7N6M128S5N | 401S48M71S | 1.6110000000000002e-129 | 48.63 | 5.1879999999999996e-23 | 100.0 | 100.0 | 100.0 | 95 | 384 | 1 | 290 | 387.0 | 392.0 | 8.0 | 13.0 | 402 | 449 | 1 | 48 | 95 | 169 | 170 | 193 | 194 | 244 | 245 | 265 | 266 | 379 | 416.0 | 448.0 | 380.0 | 415.0 | GG | 2 | CAACCCCGT | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'S', '109 ': 'A', '110 ': 'T', '112 ': 'P', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGACCTTCTTGTTTG-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACGTCACCACCATGGCCTGGGCTCTGCTCCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-8*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNVVFGGGTKLTVL | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNVVFGGGTKLTVL | 1 | 294 | null | null | 295 | 331 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAAT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAAT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPPSASGSPGQSVTISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | KRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATGCAGGCAGCAACAATGTGGTA | SSYAGSNNVV | TGCAGCTCATATGCAGGCAGCAACAATGTGGTATTC | 36.0 | CSSYAGSNNVVF | 12.0 | 459.921 | null | 71.827 | 98S294M248S3N | null | 392S1N37M211S | 2.651e-131 | null | 1.491e-16 | 100.0 | null | 100.0 | 99 | 392 | 1 | 294 | null | null | null | null | 393 | 429 | 2 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'V', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '113 ': 'S', '114 ': 'N', '115 ': 'N', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCAGCTAGTCT-1_contig_1 | ATCATCCAACAACCACATCCCTTCTCTACAGAAGCCTCTGAGAGGAAAGTTCTTCACCATGGACTGGACCTGGAGGGTCTTCTGCTTGCTGGCTGTAGCTCCAGGTGCTCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGAGGGGGGAGTACGGTGACTACCGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-46*01 | IGHD4-17*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGAGGGGGGAGTACGGTGACTACCGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNNNNTACGGTGACTACNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARGGGSTVTTEFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARXXXXTVTTXFDYWGQGTLVTVSS | 1 | 295 | 306.0 | 317.0 | 322 | 364 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | TACGGTGACTAC | TVTT | TACGGTGACTAC | TVTT | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGCTACTAT | GYTFTSYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATA | MHWVRQAPGQGLEWMGI | ATCAACCCTAGTGGTGGTAGCACA | INPSGGST | AGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | SYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGAGGGGGGAGTACGGTGACTACCGAATTTGACTAC | ARGGGSTVTTEFDY | TGTGCGAGAGGAGGGGGGAGTACGGTGACTACCGAATTTGACTACTGG | 48.0 | CARGGGSTVTTEFDYW | 16.0 | 461.479 | 23.76 | 83.363 | 115S295M140S1N | 420S4N12M118S | 436S5N43M71S | 7.721e-132 | 0.01734 | 4.3030000000000005e-20 | 100.0 | 100.0 | 100.0 | 116 | 410 | 1 | 295 | 421.0 | 432.0 | 5.0 | 16.0 | 437 | 479 | 6 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 446.0 | 478.0 | 404.0 | 445.0 | GAGGGGGGAG | 10 | CGAA | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'I'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'V', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'G', '110 ': 'S', '111 ': 'T', '112A': 'V', '112 ': 'T', '113 ': 'T', '114 ': 'E', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCAGCTAGTCT-1_contig_2 | AGCTGTGGGCTCAGAAGCAGAGTTCTGGGGTGTCTCCACCATGGCCTGGACCCCTCTCTGGCTCACTCTCCTCACTCTTTGCATAGGTTCTGTGGTTTCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-19*01 | null | IGLJ2*01 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHVVFGGGTKLTVL | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHVVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCAT | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNH | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCAT | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNH | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGAC | SSELTQDPAVSVALGQTVRITCQGD | AGCCTCAGAAGCTATTAT | SLRSYY | GCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTAT | ASWYQQKPGQAPVLVIY | GGTAAAAAC | GKN | AACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGT | NRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AACTCCCGGGACAGCAGTGGTAACCATGTGGTA | NSRDSSGNHVV | TGTAACTCCCGGGACAGCAGTGGTAACCATGTGGTATTC | 39.0 | CNSRDSSGNHVVF | 13.0 | 450.572 | null | 71.827 | 97S288M248S2N | null | 385S1N37M211S | 1.7090000000000002e-128 | null | 1.475e-16 | 100.0 | null | 100.0 | 98 | 385 | 1 | 288 | null | null | null | null | 386 | 422 | 2 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 392.0 | 421.0 | 359.0 | 391.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'S', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'D', '8 ': 'P', '9 ': 'A', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'V', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'S', '28 ': 'L', '29 ': 'R', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'K', '65 ': 'N'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'N', '106 ': 'S', '107 ': 'R', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'N', '115 ': 'H', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCAGCTAGTGG-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGGTGTTGAACATTTTGACTGGTTATCCCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD3-9*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGGTGTTGAACATTTTGACTGGTTATCCCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGNNNNNNNNNATTTTGACTGGTTATNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGVEHFDWLSHYFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXFDWLXXYFDYWGQGTLVTVSS | 1 | 295 | 305.0 | 319.0 | 323 | 370 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | ATTTTGACTGGTTAT | FDWL | ATTTTGACTGGTTAT | FDWL | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGGTGTTGAACATTTTGACTGGTTATCCCACTACTTTGACTAC | AKGVEHFDWLSHYFDY | TGTGCGAAAGGTGTTGAACATTTTGACTGGTTATCCCACTACTTTGACTACTGG | 54.0 | CAKGVEHFDWLSHYFDYW | 18.0 | 461.479 | 29.528 | 92.976 | 137S295M146S1N | 441S10N15M122S6N | 459S48M71S | 8.09e-132 | 0.0003347 | 5.779e-23 | 100.0 | 100.0 | 100.0 | 138 | 432 | 1 | 295 | 442.0 | 456.0 | 11.0 | 25.0 | 460 | 507 | 1 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 474.0 | 506.0 | 426.0 | 473.0 | GTGTTGAAC | 9 | CCC | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'G', '108 ': 'V', '109 ': 'E', '110 ': 'H', '111 ': 'F', '111A': 'D', '112B': 'W', '112A': 'L', '112 ': 'S', '113 ': 'H', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCAGCTAGTGG-1_contig_2 | GGGGGAAGGAATAAGAGAGGCCTGGGGAGCCCAGCTGTGCTGTGGGCTCAGGAGGCAGAGCTCTGGGAATCTCACCATGGCCTGGACCCCTCTCCTGCTCCCCCTCCTCACTTTCTGCACAGTCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-10*01 | null | IGLJ3*02 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGNNGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHRGVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHXXVFGGGTKLTVL | 1 | 290 | null | null | 293 | 328 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNH | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNH | null | null | null | null | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAAAAATAT | ALPKKY | GCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTAT | AYWYQQKSGQAPVLVIY | GAGGACAGC | EDS | AAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGT | KRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TACTCAACAGACAGCAGTGGTAATCATAGGGGGGTG | YSTDSSGNHRGV | TGTTACTCAACAGACAGCAGTGGTAATCATAGGGGGGTGTTC | 42.0 | CYSTDSSGNHRGVF | 14.0 | 453.689 | null | 69.904 | 133S290M249S | null | 425S2N36M211S | 2.098e-129 | null | 5.942e-16 | 100.0 | null | 100.0 | 134 | 423 | 1 | 290 | null | null | null | null | 426 | 461 | 3 | 38 | 134 | 208 | 209 | 226 | 227 | 277 | 278 | 286 | 287 | 394 | 431.0 | 460.0 | 395.0 | 430.0 | GG | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'S', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'M', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'V', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Y', '106 ': 'S', '107 ': 'T', '108 ': 'D', '109 ': 'S', '110 ': 'S', '112 ': 'G', '113 ': 'N', '114 ': 'H', '115 ': 'R', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCAGGCATTGG-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGATATAGTGGCTACGATTCGCCTTTTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | IGHD5-12*01 | IGHJ3*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGATATAGTGGCTACGATTCGCCTTTTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGATATAGTGGCTACGATTNNNNNNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGYSGYDSPFAFDIWGQGTMVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGYSGYDXXXAFDIWGQGTMVTVSS | 1 | 295 | 296.0 | 313.0 | 321 | 367 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | GATATAGTGGCTACGATT | YSGYD | GATATAGTGGCTACGATT | YSGYD | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGGATATAGTGGCTACGATTCGCCTTTTGCTTTTGATATC | ARGYSGYDSPFAFDI | TGTGCGAGAGGATATAGTGGCTACGATTCGCCTTTTGCTTTTGATATCTGG | 51.0 | CARGYSGYDSPFAFDIW | 17.0 | 461.479 | 35.296 | 91.054 | 121S295M143S1N | 416S3N18M125S2N | 441S3N47M71S | 7.854e-132 | 5.936e-06 | 2.118e-22 | 100.0 | 100.0 | 100.0 | 122 | 416 | 1 | 295 | 417.0 | 434.0 | 4.0 | 21.0 | 442 | 488 | 4 | 50 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 455.0 | 487.0 | 410.0 | 454.0 | null | 0 | CGCCTTT | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'Y', '109 ': 'S', '110 ': 'G', '111 ': 'Y', '111A': 'D', '112A': 'S', '112 ': 'P', '113 ': 'F', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCAGGCATTGG-1_contig_1 | AGCTTCAGCTGTGGTAGAGAAGACAGGATTCAGGACAATCTCCAGCATGGCCGGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTTCTTTGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-47*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTTCTTTGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTNNNNNGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGSLVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGXXVFGGGTKLTVL | 1 | 294 | null | null | 300 | 334 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | null | null | null | null | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATTAT | SSNIGSNY | GTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VYWYQQLPGTAPKLLIY | AGGAATAAT | RNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAGTGGTTCTTTGGTG | AAWDDSLSGSLV | TGTGCAGCATGGGATGACAGCCTGAGTGGTTCTTTGGTGTTC | 42.0 | CAAWDDSLSGSLVF | 14.0 | 459.921 | null | 67.981 | 103S294M251S2N | null | 402S3N35M211S | 2.6860000000000004e-131 | null | 2.171e-15 | 100.0 | null | 100.0 | 104 | 397 | 1 | 294 | null | null | null | null | 403 | 437 | 4 | 38 | 104 | 178 | 179 | 202 | 203 | 253 | 254 | 262 | 263 | 370 | 407.0 | 436.0 | 371.0 | 406.0 | TCTTT | 5 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '112 ': 'L', '113 ': 'S', '114 ': 'G', '115 ': 'S', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCAGTCCCACG-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCTTATGGGAGCTACCCGCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD1-26*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCTTATGGGAGCTACCCGCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNTGGGAGCTACNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLMGATRYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXGATXYYYYGMDVWGQGTTVTVSS | 1 | 296 | 302.0 | 311.0 | 315 | 372 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TGGGAGCTAC | GAT | TGGGAGCTAC | GAT | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCTTATGGGAGCTACCCGCTACTACTACTACGGTATGGACGTC | ARDLMGATRYYYYGMDV | TGTGCGAGAGATCTTATGGGAGCTACCCGCTACTACTACTACGGTATGGACGTCTGG | 57.0 | CARDLMGATRYYYYGMDVW | 19.0 | 463.037 | 19.914 | 112.203 | 137S296M148S | 438S7N10M133S3N | 451S4N58M72S | 2.762e-132 | 0.2635 | 9.467999999999999e-29 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 439.0 | 448.0 | 8.0 | 17.0 | 452 | 509 | 5 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 477.0 | 509.0 | 426.0 | 476.0 | TCTTA | 5 | CCG | 3.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'M', '110 ': 'G', '111 ': 'A', '111A': 'T', '111B': 'R', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCAGTCCCACG-1_contig_2 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGCCCCCAATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGCCCCCAATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCNNNATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPQFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPXFGGGTKLTVL | 1 | 296 | null | null | 300 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGCCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGP | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGP | null | null | null | null | ATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | ATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGCCCCCAA | AAWDDSLNGPQ | TGTGCAGCATGGGATGACAGCCTGAATGGCCCCCAATTC | 39.0 | CAAWDDSLNGPQF | 13.0 | 459.921 | null | 62.213 | 104S296M246S | null | 403S6N32M211S | 2.6770000000000004e-131 | null | 1.179e-13 | 99.662 | null | 100.0 | 105 | 400 | 1 | 296 | null | null | null | null | 404 | 435 | 7 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | CCA | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'P', '117 ': 'Q'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCAGTGGAGTC-1_contig_1 | GGGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGGAGTAAACCACGACAAGAGATGGCTACAATCTTTGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD5-12*01 | IGHJ5*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGGAGTAAACCACGACAAGAGATGGCTACAATCTTTGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGNNNNNNNNNNNNNNNNNNNNTGGCTACNNNNNNNNNCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARSKPRQEMATIFGWFDPWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXXXXXXATXXXWFDPWGQGTLVTVSS | 1 | 296 | 317.0 | 323.0 | 333 | 379 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | TGGCTAC | AT | TGGCTAC | AT | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGAGTAAACCACGACAAGAGATGGCTACAATCTTTGGCTGGTTCGACCCC | ARSKPRQEMATIFGWFDP | TGTGCGAGGAGTAAACCACGACAAGAGATGGCTACAATCTTTGGCTGGTTCGACCCCTGG | 60.0 | CARSKPRQEMATIFGWFDPW | 20.0 | 463.037 | 14.146 | 91.054 | 96S296M154S3N | 412S10N7M127S6N | 428S4N47M71S | 2.602e-132 | 13.48 | 2.0669999999999999e-22 | 100.0 | 100.0 | 100.0 | 97 | 392 | 1 | 296 | 413.0 | 419.0 | 11.0 | 17.0 | 429 | 475 | 5 | 51 | 97 | 171 | 172 | 201 | 202 | 252 | 253 | 273 | 274 | 387 | 442.0 | 474.0 | 388.0 | 441.0 | GAGTAAACCACGACAAGAGA | 20 | AATCTTTGG | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'K', '109 ': 'P', '110 ': 'R', '111 ': 'Q', '111A': 'E', '111B': 'M', '112C': 'A', '112B': 'T', '112A': 'I', '112 ': 'F', '113 ': 'G', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCAGTGGAGTC-1_contig_2 | GCTCTGCTTCAGCTGTGGGCACAAGAGGCAGCACTCAGGACAATCTCCAGCATGGCCTGGTCTCCTCTCCTCCTCACTCTCCTCGCTCACTGCACAGGGTCCTGGGCCCAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTATTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-40*01 | null | IGLJ1*01 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTATTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTTNTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGYYVFGTGTKVTVL | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGXYVFGTGTKVTVL | 1 | 298 | null | null | 300 | 337 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTT | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSG | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGAGTGGTT | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSG | null | null | null | null | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGC | QSVLTQPPSVSGAPGQRVTISCTGS | AGCTCCAACATCGGGGCAGGTTATGAT | SSNIGAGYD | GTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTAT | VHWYQQLPGTAPKLLIY | GGTAACAGC | GNS | AATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | NRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAGTCCTATGACAGCAGCCTGAGTGGTTATTATGTC | QSYDSSLSGYYV | TGCCAGTCCTATGACAGCAGCCTGAGTGGTTATTATGTCTTC | 42.0 | CQSYDSSLSGYYVF | 14.0 | 466.153 | null | 73.749 | 108S298M250S1N | null | 407S38M211S | 3.618e-133 | null | 4.034e-17 | 100.0 | null | 100.0 | 109 | 406 | 1 | 298 | null | null | null | null | 408 | 445 | 1 | 38 | 109 | 183 | 184 | 210 | 211 | 261 | 262 | 270 | 271 | 378 | 415.0 | 444.0 | 379.0 | 414.0 | A | 1 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '31 ': 'G', '35 ': 'A', '36 ': 'G', '37 ': 'Y', '38 ': 'D'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'N', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '110 ': 'S', '112 ': 'L', '113 ': 'S', '114 ': 'G', '115 ': 'Y', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCCAAGCCGCT-1_contig_2 | GATGGGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAACCCGCGGGGGATACAGCTATGGTTCCTTTGTATGCGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD5-18*01 | IGHJ5*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAACCCGCGGGGGATACAGCTATGGTTCCTTTGTATGCGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACANNNNNNNNNGGATACAGCTATGGTTNNNNNNNNNNNNNNCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARQPAGDTAMVPLYAFWFDPWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXDTAMVXXXXXWFDPWGQGTLVTVSS | 1 | 299 | 309.0 | 324.0 | 339 | 385 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GGATACAGCTATGGTT | DTAMV | GGATACAGCTATGGTT | DTAMV | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGACAACCCGCGGGGGATACAGCTATGGTTCCTTTGTATGCGTTCTGGTTCGACCCC | ARQPAGDTAMVPLYAFWFDP | TGTGCGAGACAACCCGCGGGGGATACAGCTATGGTTCCTTTGTATGCGTTCTGGTTCGACCCCTGG | 66.0 | CARQPAGDTAMVPLYAFWFDPW | 22.0 | 467.712 | 31.45 | 91.054 | 99S299M157S | 407S2N16M132S2N | 437S4N47M71S | 1.037e-133 | 8.47e-05 | 2.1019999999999997e-22 | 100.0 | 100.0 | 100.0 | 100 | 398 | 1 | 299 | 408.0 | 423.0 | 3.0 | 18.0 | 438 | 484 | 5 | 51 | 100 | 174 | 175 | 204 | 205 | 255 | 256 | 276 | 277 | 390 | 451.0 | 483.0 | 391.0 | 450.0 | ACCCGCGGG | 9 | CCTTTGTATGCGTT | 14.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'Q', '108 ': 'P', '109 ': 'A', '110 ': 'G', '111 ': 'D', '111A': 'T', '111B': 'A', '111C': 'M', '112D': 'V', '112C': 'P', '112B': 'L', '112A': 'Y', '112 ': 'A', '113 ': 'F', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCCAAGCCGCT-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKVEIK | 1 | 289 | null | null | 290 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCTCGGACG | QQYGSSPRT | TGTCAGCAGTATGGTAGCTCACCTCGGACGTTC | 33.0 | CQQYGSSPRTF | 11.0 | 452.13 | null | 69.904 | 104S289M172S1N | null | 393S2N36M136S | 5.179e-129 | null | 4.98e-16 | 100.0 | null | 100.0 | 105 | 393 | 1 | 289 | null | null | null | null | 394 | 429 | 3 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCCATACGCTA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGGGGCGCCTTACCTTCTAGTAGTGGTTCTTTCTTTTCGGATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ3*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGGGGCGCCTTACCTTCTAGTAGTGGTTCTTTCTTTTCGGATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNNNNNNNNNNNNNNNTAGTAGTGGTTNNNNNNNNNNNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGGALPSSSGSFFSDDAFDIWGQGTMVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXXXSSGXXXXXDAFDIWGQGTMVTVSS | 1 | 295 | 312.0 | 322.0 | 336 | 385 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TAGTAGTGGTT | SSG | TAGTAGTGGTT | SSG | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAAAGGGGGCGCCTTACCTTCTAGTAGTGGTTCTTTCTTTTCGGATGATGCTTTTGATATC | AKGGALPSSSGSFFSDDAFDI | TGTGCGAAAGGGGGCGCCTTACCTTCTAGTAGTGGTTCTTTCTTTTCGGATGATGCTTTTGATATCTGG | 69.0 | CAKGGALPSSSGSFFSDDAFDIW | 23.0 | 461.479 | 21.837 | 96.822 | 136S295M161S1N | 447S12N11M134S8N | 471S50M71S | 8.296e-132 | 0.07085 | 4.12e-24 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 448.0 | 458.0 | 13.0 | 23.0 | 472 | 521 | 1 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 488.0 | 520.0 | 425.0 | 487.0 | GGGGCGCCTTACCTTC | 16 | CTTTCTTTTCGGA | 13.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'G', '108 ': 'G', '109 ': 'A', '110 ': 'L', '111 ': 'P', '111A': 'S', '111B': 'S', '111C': 'S', '111D': 'G', '112D': 'S', '112C': 'F', '112B': 'F', '112A': 'S', '112 ': 'D', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCCATACGCTA-1_contig_1 | ATCTCCTCCAGCAGCAGCCTCTGACTCTGCTGATTTGCATCATGGGCCGCTCTCTCCAGCAAGGGGATAAGAGAGGCCTGGGAGGAACCTGCTCAGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATGTTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ3*02 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATGTTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATNNTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDVWVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDXWVFGGGTKLTVL | 1 | 285 | null | null | 288 | 325 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSD | null | null | null | null | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATGTTTGGGTG | QVWDSSSDVWV | TGTCAGGTGTGGGATAGTAGTAGTGATGTTTGGGTGTTC | 39.0 | CQVWDSSSDVWVF | 13.0 | 445.898 | null | 73.749 | 191S285M251S5N | null | 478S38M211S | 5.042e-127 | null | 4.478e-17 | 100.0 | null | 100.0 | 192 | 476 | 1 | 285 | null | null | null | null | 479 | 516 | 1 | 38 | 192 | 266 | 267 | 284 | 285 | 335 | 336 | 344 | 345 | 452 | 486.0 | 515.0 | 453.0 | 485.0 | GT | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'D', '115 ': 'V', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCCATTGCGGC-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGAGATTGTAGTAGTACCAGCTGCTAATTTGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD2-2*01 | IGHJ5*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGAGATTGTAGTAGTACCAGCTGCTAATTTGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGANATTGTAGTAGTACCAGCTGCTANNNNNNNNTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREIVVVPAANLGWFDPWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXIVVVPAAXXXWFDPWGQGTLVTVSS | 1 | 299 | 301.0 | 322.0 | 331 | 376 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | ATTGTAGTAGTACCAGCTGCTA | IVVVPAA | ATTGTAGTAGTACCAGCTGCTA | IVVVPAA | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAGATTGTAGTAGTACCAGCTGCTAATTTGGGGTGGTTCGACCCC | AREIVVVPAANLGWFDP | TGTGCGAGAGAGATTGTAGTAGTACCAGCTGCTAATTTGGGGTGGTTCGACCCCTGG | 57.0 | CAREIVVVPAANLGWFDPW | 19.0 | 467.712 | 42.986 | 89.131 | 92S299M148S | 392S5N22M125S4N | 422S5N46M71S | 1.005e-133 | 2.768e-08 | 7.735e-22 | 100.0 | 100.0 | 100.0 | 93 | 391 | 1 | 299 | 393.0 | 414.0 | 6.0 | 27.0 | 423 | 468 | 6 | 51 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 435.0 | 467.0 | 384.0 | 434.0 | G | 1 | ATTTGGGG | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'I', '109 ': 'V', '110 ': 'V', '111 ': 'V', '111A': 'P', '111B': 'A', '112B': 'A', '112A': 'N', '112 ': 'L', '113 ': 'G', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCCATTGCGGC-1_contig_2 | AGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCGGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ2*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCGGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCNGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPRYTFGQGTKLEIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPXYTFGQGTKLEIK | 1 | 286 | null | null | 288 | 325 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGCTTAATAGTTACCCTCGGTACACT | QQLNSYPRYT | TGTCAACAGCTTAATAGTTACCCTCGGTACACTTTT | 36.0 | CQQLNSYPRYTF | 12.0 | 447.456 | null | 73.749 | 86S286M175S1N | null | 373S1N38M136S | 1.278e-127 | null | 3.352e-17 | 100.0 | null | 100.0 | 87 | 372 | 1 | 286 | null | null | null | null | 374 | 411 | 2 | 39 | 87 | 164 | 165 | 182 | 183 | 233 | 234 | 242 | 243 | 350 | 381.0 | 410.0 | 351.0 | 380.0 | G | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '109 ': 'S', '113 ': 'Y', '114 ': 'P', '115 ': 'R', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCGTACGAAAT-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATGGACGTTGTAGTGGTGGTAGCTGCTACTCGTCTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD2-15*01 | IGHJ3*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATGGACGTTGTAGTGGTGGTAGCTGCTACTCGTCTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNTTGTAGTGGTGGTAGCTGCTACTCNNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDGRCSGGSCYSSAFDIWGQGTMVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXCSGGSCYSXAFDIWGQGTMVTVSS | 1 | 296 | 303.0 | 326.0 | 330 | 376 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TTGTAGTGGTGGTAGCTGCTACTC | CSGGSCYS | TTGTAGTGGTGGTAGCTGCTACTC | CSGGSCYS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGATGGACGTTGTAGTGGTGGTAGCTGCTACTCGTCTGCTTTTGATATC | ARDGRCSGGSCYSSAFDI | TGTGCGAGAGATGGACGTTGTAGTGGTGGTAGCTGCTACTCGTCTGCTTTTGATATCTGG | 60.0 | CARDGRCSGGSCYSSAFDIW | 20.0 | 463.037 | 46.832 | 91.054 | 124S296M151S | 426S6N24M121S1N | 453S3N47M71S | 2.7280000000000002e-132 | 2.042e-09 | 2.1639999999999997e-22 | 100.0 | 100.0 | 100.0 | 125 | 420 | 1 | 296 | 427.0 | 450.0 | 7.0 | 30.0 | 454 | 500 | 4 | 50 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 467.0 | 499.0 | 413.0 | 466.0 | TGGACG | 6 | GTC | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'G', '109 ': 'R', '110 ': 'C', '111 ': 'S', '111A': 'G', '111B': 'G', '112C': 'S', '112B': 'C', '112A': 'Y', '112 ': 'S', '113 ': 'S', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCGTACGAAAT-1_contig_1 | TCTGAGATGGGAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPYTFGQGTKLEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPYTFGQGTKLEIK | 1 | 285 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGAGTTACAGTACCCCTTACACT | QQSYSTPYT | TGTCAACAGAGTTACAGTACCCCTTACACTTTT | 33.0 | CQQSYSTPYTF | 11.0 | 445.898 | null | 71.827 | 104S285M173S2N | null | 389S2N37M136S | 3.872e-127 | null | 1.306e-16 | 100.0 | null | 100.0 | 105 | 389 | 1 | 285 | null | null | null | null | 390 | 426 | 3 | 39 | 105 | 182 | 183 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 396.0 | 425.0 | 369.0 | 395.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCGTCCAAGTT-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGTCTAGTAACGGGGTGGGGCGTGGGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | IGHD3-16*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGTCTAGTAACGGGGTGGGGCGTGGGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGNNNNNNNNNNNNNNNNNNNNTGGGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCASLVTGWGVGDYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAXXXXXXXXGDYGMDVWGQGTTVTVSS | 1 | 293 | 314.0 | 319.0 | 320 | 369 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCA | TGGGGG | G | TGGGGG | G | ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGTCTAGTAACGGGGTGGGGCGTGGGGGACTACGGTATGGACGTC | ASLVTGWGVGDYGMDV | TGTGCGAGTCTAGTAACGGGGTGGGGCGTGGGGGACTACGGTATGGACGTCTGG | 54.0 | CASLVTGWGVGDYGMDVW | 18.0 | 458.363 | 12.223 | 96.822 | 121S293M148S3N | 434S16N6M122S15N | 440S12N50M72S | 6.849e-131 | 52.63 | 3.907e-24 | 100.0 | 100.0 | 100.0 | 122 | 414 | 1 | 293 | 435.0 | 440.0 | 17.0 | 22.0 | 441 | 490 | 13 | 62 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 458.0 | 490.0 | 410.0 | 457.0 | TCTAGTAACGGGGTGGGGCG | 20 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'L', '108 ': 'V', '109 ': 'T', '110 ': 'G', '111 ': 'W', '111A': 'G', '112B': 'V', '112A': 'G', '112 ': 'D', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCGTCCAAGTT-1_contig_1 | AGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCTCGCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCTCGCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCNNNNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLLALTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLXXLTFGGGTKVEIK | 1 | 283 | null | null | 288 | 325 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNL | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNL | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATGATAATCTCCTCGCGCTCACT | QQYDNLLALT | TGTCAACAGTATGATAATCTCCTCGCGCTCACTTTC | 36.0 | CQQYDNLLALTF | 12.0 | 442.782 | null | 73.749 | 93S283M178S4N | null | 380S38M136S | 3.307e-126 | null | 3.396e-17 | 100.0 | null | 100.0 | 94 | 376 | 1 | 283 | null | null | null | null | 381 | 418 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 388.0 | 417.0 | 358.0 | 387.0 | TCGC | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '113 ': 'L', '114 ': 'L', '115 ': 'A', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCGTCGGATCC-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACATCGTCCTATGATAGTAGTGGTTATTACTGGGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD3-22*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACATCGTCCTATGATAGTAGTGGTTATTACTGGGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACANNNNNCTATGATAGTAGTGGTTATTACTNNNACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTSSYDSSGYYWDYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXYDSSGYYXXYYYGMDVWGQGTTVTVSS | 1 | 300 | 306.0 | 328.0 | 332 | 387 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | CTATGATAGTAGTGGTTATTACT | YDSSGYY | CTATGATAGTAGTGGTTATTACT | YDSSGYY | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACCACATCGTCCTATGATAGTAGTGGTTATTACTGGGACTACTACTACGGTATGGACGTC | TTSSYDSSGYYWDYYYGMDV | TGTACCACATCGTCCTATGATAGTAGTGGTTATTACTGGGACTACTACTACGGTATGGACGTCTGG | 66.0 | CTTSSYDSSGYYWDYYYGMDVW | 22.0 | 469.27 | 44.909 | 108.358 | 137S300M159S2N | 442S6N23M131S2N | 468S6N56M72S | 3.7739999999999997e-134 | 8.088e-09 | 1.397e-27 | 100.0 | 100.0 | 100.0 | 138 | 437 | 1 | 300 | 443.0 | 465.0 | 7.0 | 29.0 | 469 | 524 | 7 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 492.0 | 524.0 | 432.0 | 491.0 | TCGTC | 5 | GGG | 3.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'S', '108 ': 'S', '109 ': 'Y', '110 ': 'D', '111 ': 'S', '111A': 'S', '111B': 'G', '111C': 'Y', '112D': 'Y', '112C': 'W', '112B': 'D', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCGTCGGATCC-1_contig_2 | GTGGGCTCAGGAGGCAGAGCTCTGGGAATCTCACCATGGCCTGGACCCCTCTCCTGCTCCCCCTCCTCACTTTCTGCACAGTCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-10*01 | null | IGLJ2*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNLGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNLGGGTKLTVL | 1 | 286 | null | null | 287 | 316 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATC | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGN | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATC | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGN | null | null | null | null | TCGGCGGAGGGACCAAGCTGACCGTCCTAG | GGGTKLTVL | TCGGCGGAGGGACCAAGCTGACCGTCCTAG | GGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAAAAATAT | ALPKKY | GCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTAT | AYWYQQKSGQAPVLVIY | GAGGACAGC | EDS | AAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGT | KRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYC | CTCGGCGGAGGGACCAAGCTGACCGTCCTA | LGGGTKLTVL | TACTCAACAGACAGCAGTGGTAAT | YSTDSSGN | TGTTACTCAACAGACAGCAGTGGTAATCTC | 30.0 | CYSTDSSGNL | 10.0 | 447.456 | null | 58.368 | 92S286M241S4N | null | 378S8N30M211S | 1.4469999999999999e-127 | null | 1.623e-12 | 100.0 | null | 100.0 | 93 | 378 | 1 | 286 | null | null | null | null | 379 | 408 | 9 | 38 | 93 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 378.0 | 407.0 | 354.0 | 377.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'S', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'M', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'V', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Y', '106 ': 'S', '107 ': 'T', '108 ': 'D', '114 ': 'S', '115 ': 'S', '116 ': 'G', '117 ': 'N'}, 'fwl4': {'118 ': 'L', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCGTGGCCCTA-1_contig_1 | GGGATCACACAACAGCCACATCCCTCCCCTACAGAAGCCCCCAGAGCGCAGCACCTCACCATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGGCACCCACGCCCAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGATCTTTATGGTCTCATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-24*01 | IGHD3-10*01 | IGHJ4*02 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGATCTTTATGGTCTCATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGANNNNTATGGTNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATDLYGLIDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATXXYGXXDYWGQGTLVTVSS | 1 | 296 | 301.0 | 306.0 | 311 | 352 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGA | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGA | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | TATGGT | YG | TATGGT | YG | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCC | QVQLVQSGAEVKKPGASVKVSCKVS | GGATACACCCTCACTGAATTATCC | GYTLTELS | ATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGT | MHWVRQAPGKGLEWMGG | TTTGATCCTGAAGATGGTGAAACA | FDPEDGET | ATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | IYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAACAGATCTTTATGGTCTCATTGACTAC | ATDLYGLIDY | TGTGCAACAGATCTTTATGGTCTCATTGACTACTGG | 36.0 | CATDLYGLIDYW | 12.0 | 463.037 | 12.223 | 81.44 | 117S296M127S | 417S7N6M117S18N | 427S6N42M71S | 2.572e-132 | 50.54 | 1.601e-19 | 100.0 | 100.0 | 100.0 | 118 | 413 | 1 | 296 | 418.0 | 423.0 | 8.0 | 13.0 | 428 | 469 | 7 | 48 | 118 | 192 | 193 | 216 | 217 | 267 | 268 | 291 | 292 | 405 | 436.0 | 468.0 | 406.0 | 435.0 | TCTT | 4 | CTCA | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'L', '35 ': 'T', '36 ': 'E', '37 ': 'L', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'F', '57 ': 'D', '58 ': 'P', '59 ': 'E', '62 ': 'D', '63 ': 'G', '64 ': 'E', '65 ': 'T'}, 'fwh3': {'66 ': 'I', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'E', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'D', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'T', '107 ': 'D', '108 ': 'L', '109 ': 'Y', '113 ': 'G', '114 ': 'L', '115 ': 'I', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCGTGGCCCTA-1_contig_2 | CCCTTTCTTAGCTGGGGAGGAATCAGTCCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-17*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPPTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPPTFGQGTKVEIK | 1 | 287 | null | null | 288 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTAT | LGWYQQKPGKAPKRLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CTACAGCATAATAGTTACCCTCCGACG | LQHNSYPPT | TGTCTACAGCATAATAGTTACCCTCCGACGTTC | 33.0 | CLQHNSYPPTF | 11.0 | 449.014 | null | 67.981 | 110S287M171S | null | 397S3N35M136S | 4.515e-128 | null | 1.898e-15 | 100.0 | null | 100.0 | 111 | 397 | 1 | 287 | null | null | null | null | 398 | 432 | 4 | 38 | 111 | 188 | 189 | 206 | 207 | 257 | 258 | 266 | 267 | 374 | 402.0 | 431.0 | 375.0 | 401.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'H', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCGTTTGCATG-1_contig_2 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGAGGCCATGGCCCAGGATATTGTAGTGGTGGTAGCTCCCAAGGGGGGCTACAATTACGACGGATGGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD2-15*01 | IGHJ3*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGAGGCCATGGCCCAGGATATTGTAGTGGTGGTAGCTCCCAAGGGGGGCTACAATTACGACGGATGGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNAGGATATTGTAGTGGTGGTAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREAMAQDIVVVVAPKGGYNYDGWDAFDIWGQGTMVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXXDIVVVVAXXXXXXXXXXDAFDIWGQGTMVTVSS | 1 | 299 | 311.0 | 333.0 | 364 | 412 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | AGGATATTGTAGTGGTGGTAGCT | DIVVVVA | AGGATATTGTAGTGGTGGTAGCT | DIVVVVA | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGAGGCCATGGCCCAGGATATTGTAGTGGTGGTAGCTCCCAAGGGGGGCTACAATTACGACGGATGGGATGCTTTTGATATC | AREAMAQDIVVVVAPKGGYNYDGWDAFDI | TGTGCGAGAGAGGCCATGGCCCAGGATATTGTAGTGGTGGTAGCTCCCAAGGGGGGCTACAATTACGACGGATGGGATGCTTTTGATATCTGG | 93.0 | CAREAMAQDIVVVVAPKGGYNYDGWDAFDIW | 31.0 | 467.712 | 44.909 | 94.899 | 92S299M184S | 402S23M150S8N | 455S1N49M71S | 1.07e-133 | 7.798e-09 | 1.516e-23 | 100.0 | 100.0 | 100.0 | 93 | 391 | 1 | 299 | 403.0 | 425.0 | 1.0 | 23.0 | 456 | 504 | 2 | 50 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 471.0 | 503.0 | 384.0 | 470.0 | GGCCATGGCCC | 11 | CCCAAGGGGGGCTACAATTACGACGGATGG | 30.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'A', '109 ': 'M', '110 ': 'A', '111 ': 'Q', '111A': 'D', '111B': 'I', '111C': 'V', '111D': 'V', '111E': 'V', '111F': 'V', '111G': 'A', '111H': 'P', '112H': 'K', '112G': 'G', '112F': 'G', '112E': 'Y', '112D': 'N', '112C': 'Y', '112B': 'D', '112A': 'G', '112 ': 'W', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCGTTTGCATG-1_contig_1 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ4*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIK | 1 | 302 | null | null | 303 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAATATTATAGTACTCCGCTCACT | QQYYSTPLT | TGTCAGCAATATTATAGTACTCCGCTCACTTTC | 33.0 | CQQYYSTPLTF | 11.0 | 472.386 | null | 73.749 | 90S302M174S3N | null | 392S38M136S | 4.145e-135 | null | 3.471e-17 | 100.0 | null | 100.0 | 91 | 392 | 1 | 302 | null | null | null | null | 393 | 430 | 1 | 38 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 400.0 | 429.0 | 373.0 | 399.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCTCAACGCTA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGGGGTAGGGAATACAGCTATGGTTATGGGCTGGTTTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD5-18*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGGGGTAGGGAATACAGCTATGGTTATGGGCTGGTTTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGNNNNNNNNNNATACAGCTATGGTTANNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGVGNTAMVMGWFNYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXXTAMVXXXFDYWGQGTLVTVSS | 1 | 291 | 302.0 | 316.0 | 325 | 367 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | ATACAGCTATGGTTA | TAMV | ATACAGCTATGGTTA | TAMV | TTTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FNYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGGGGGTAGGGAATACAGCTATGGTTATGGGCTGGTTTAACTAC | AGVGNTAMVMGWFNY | TGTGCGGGGGTAGGGAATACAGCTATGGTTATGGGCTGGTTTAACTACTGG | 51.0 | CAGVGNTAMVMGWFNYW | 17.0 | 455.247 | 29.528 | 77.595 | 136S291M147S5N | 437S4N15M122S1N | 460S5N43M71S | 6.038e-130 | 0.0003323 | 2.449e-18 | 100.0 | 100.0 | 97.674 | 137 | 427 | 1 | 291 | 438.0 | 452.0 | 5.0 | 19.0 | 461 | 503 | 6 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 470.0 | 502.0 | 425.0 | 469.0 | GGGGTAGGGA | 10 | TGGGCTGG | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'G', '107 ': 'V', '108 ': 'G', '109 ': 'N', '110 ': 'T', '111 ': 'A', '111A': 'M', '112A': 'V', '112 ': 'M', '113 ': 'G', '114 ': 'W', '115 ': 'F', '116 ': 'N', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCTCAACGCTA-1_contig_1 | GGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCTGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ4*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCTGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLLTFGGGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPXLTFGGGTKVEIK | 1 | 286 | null | null | 288 | 325 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGTATAATAACTGGCCTCTGCTCACT | QQYNNWPLLT | TGTCAGCAGTATAATAACTGGCCTCTGCTCACTTTC | 36.0 | CQQYNNWPLLTF | 12.0 | 447.456 | null | 73.749 | 96S286M175S1N | null | 383S38M136S | 1.303e-127 | null | 3.415e-17 | 100.0 | null | 100.0 | 97 | 382 | 1 | 286 | null | null | null | null | 384 | 421 | 1 | 38 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 391.0 | 420.0 | 361.0 | 390.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'L', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCTCAGCTCTC-1_contig_1 | AGCTCTCAGAGAGGTGCCTTAGCCCTGGATTCCAAGGCATTTCCACTTGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGAGGCGGATTACTATGATACCTACCAGCCCGAGCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-48*03 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGAGGCGGATTACTATGATACCTACCAGCCCGAGCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGANNNNNATTACTATGATANNNNNNNNNNNNNNNACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREADYYDTYQPEHFDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXYYDXXXXXXFDYWGQGTLVTVSS | 1 | 296 | 302.0 | 313.0 | 329 | 373 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | ATTACTATGATA | YYD | ATTACTATGATA | YYD | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGTTATGAA | GFTFSSYE | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MNWVRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAGGCGGATTACTATGATACCTACCAGCCCGAGCACTTTGACTAC | AREADYYDTYQPEHFDY | TGTGCGAGAGAGGCGGATTACTATGATACCTACCAGCCCGAGCACTTTGACTACTGG | 57.0 | CAREADYYDTYQPEHFDYW | 19.0 | 463.037 | 23.76 | 87.208 | 136S296M148S | 437S2N12M131S17N | 464S3N45M71S | 2.757e-132 | 0.0183 | 3.160000000000001e-21 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 438.0 | 449.0 | 3.0 | 14.0 | 465 | 509 | 4 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 476.0 | 508.0 | 425.0 | 475.0 | GGCGG | 5 | CCTACCAGCCCGAGC | 15.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'E'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'A', '109 ': 'D', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '111B': 'T', '112B': 'Y', '112A': 'Q', '112 ': 'P', '113 ': 'E', '114 ': 'H', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCTCAGCTCTC-1_contig_2 | GGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSRTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSRTFGQGTKVEIK | 1 | 286 | null | null | 287 | 322 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACGGACG | QQYGSSRT | TGTCAGCAGTATGGTAGCTCACGGACGTTC | 30.0 | CQQYGSSRTF | 10.0 | 447.456 | null | 69.904 | 96S286M172S4N | null | 382S2N36M136S | 1.2949999999999999e-127 | null | 4.881e-16 | 100.0 | null | 100.0 | 97 | 382 | 1 | 286 | null | null | null | null | 383 | 418 | 3 | 38 | 97 | 174 | 175 | 195 | 196 | 246 | 247 | 255 | 256 | 363 | 388.0 | 417.0 | 364.0 | 387.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '114 ': 'S', '115 ': 'S', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCTCCGATATG-1_contig_1 | ATCATCCAACAACCACATCCCTTCTCTACAGAAGCCTCTGAGAGGAAAGTTCTTCACCATGGACTGGACCTGGAGGGTCTTCTGCTTGCTGGCTGTAGCTCCAGGTGCTCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGACCGTAGGGGATTACTATGGTTCGGGGAGTTTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-46*01 | IGHD3-10*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGACCGTAGGGGATTACTATGGTTCGGGGAGTTTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGANNNNNNNNNATTACTATGGTTCGGGGAGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCATVGDYYGSGSFGYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAXXXXYYGSGSFDYWGQGTLVTVSS | 1 | 292 | 302.0 | 321.0 | 322 | 364 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCA | ATTACTATGGTTCGGGGAGT | YYGSGS | ATTACTATGGTTCGGGGAGT | YYGSGS | TTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FGYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGCTACTAT | GYTFTSYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATA | MHWVRQAPGQGLEWMGI | ATCAACCCTAGTGGTGGTAGCACA | INPSGGST | AGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | SYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGACCGTAGGGGATTACTATGGTTCGGGGAGTTTTGGCTAC | ATVGDYYGSGSFGY | TGTGCGACCGTAGGGGATTACTATGGTTCGGGGAGTTTTGGCTACTGG | 48.0 | CATVGDYYGSGSFGYW | 16.0 | 456.805 | 39.141 | 77.595 | 115S292M143S4N | 416S2N20M114S9N | 436S5N43M71S | 1.9709999999999998e-130 | 4.062e-07 | 2.345e-18 | 100.0 | 100.0 | 97.674 | 116 | 407 | 1 | 292 | 417.0 | 436.0 | 3.0 | 22.0 | 437 | 479 | 6 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 446.0 | 478.0 | 404.0 | 445.0 | CCGTAGGGG | 9 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'I'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'V', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'T', '107 ': 'V', '108 ': 'G', '109 ': 'D', '110 ': 'Y', '111 ': 'Y', '112A': 'G', '112 ': 'S', '113 ': 'G', '114 ': 'S', '115 ': 'F', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCTCCGATATG-1_contig_2 | GGGGTCTCAGGAGGCAGCGCTCTCAGGACGTCACCACCATGGCCTGGGCTCTGCTCCTCCTCAGCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACATCTTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-8*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACATCTTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACANNNTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNILFGGGTKLTVL | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNXXFGGGTKLTVL | 1 | 292 | null | null | 296 | 328 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACA | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSN | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACA | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSN | null | null | null | null | TATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | TATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPPSASGSPGQSVTISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | KRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATGCAGGCAGCAACATCTTA | SSYAGSNIL | TGCAGCTCATATGCAGGCAGCAACATCTTATTC | 33.0 | CSSYAGSNILF | 11.0 | 456.805 | null | 64.136 | 95S292M247S5N | null | 390S5N33M211S | 2.276e-130 | null | 3.052e-14 | 100.0 | null | 100.0 | 96 | 387 | 1 | 292 | null | null | null | null | 391 | 423 | 6 | 38 | 96 | 170 | 171 | 197 | 198 | 248 | 249 | 257 | 258 | 365 | 393.0 | 422.0 | 366.0 | 392.0 | TCT | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'V', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '114 ': 'S', '115 ': 'N', '116 ': 'I', '117 ': 'L'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGCCGCTCTAACCGA-1_contig_1 | TGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGACGTTATAGGGCCCAATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD3-16*02 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGACGTTATAGGGCCCAATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGACGTTATANNNNNNNNTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARRYRAQYFDYWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARRYXXXYFDYWGQGTLVTVSS | 1 | 297 | 298.0 | 304.0 | 313 | 358 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CGTTATA | RY | CGTTATA | RY | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGACGTTATAGGGCCCAATACTTTGACTAC | ARRYRAQYFDY | TGTGCGAGACGTTATAGGGCCCAATACTTTGACTACTGG | 39.0 | CARRYRAQYFDYW | 13.0 | 464.595 | 14.146 | 89.131 | 120S297M132S2N | 417S28N7M125S2N | 432S2N46M71S | 8.887e-133 | 13.56 | 7.8819999999999995e-22 | 100.0 | 100.0 | 100.0 | 121 | 417 | 1 | 297 | 418.0 | 424.0 | 29.0 | 35.0 | 433 | 478 | 3 | 48 | 121 | 195 | 196 | 225 | 226 | 276 | 277 | 297 | 298 | 411 | 445.0 | 477.0 | 412.0 | 444.0 | null | 0 | GGGCCCAA | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'Y', '109 ': 'R', '110 ': 'A', '113 ': 'Q', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGCCGCTCTAACCGA-1_contig_2 | AGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCAGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ2*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCAGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCNGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPQYTFGQGTKLEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPXYTFGQGTKLEIK | 1 | 286 | null | null | 288 | 325 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATAATAACTGGCCTCAGTACACT | QQYNNWPQYT | TGTCAGCAGTATAATAACTGGCCTCAGTACACTTTT | 36.0 | CQQYNNWPQYTF | 12.0 | 447.456 | null | 73.749 | 104S286M175S1N | null | 391S1N38M136S | 1.322e-127 | null | 3.465e-17 | 100.0 | null | 100.0 | 105 | 390 | 1 | 286 | null | null | null | null | 392 | 429 | 2 | 39 | 105 | 182 | 183 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | A | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'Q', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGGAGCAGAATCTCC-1_contig_2 | CAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCCCTCATTAAGGACTGGTTATCCATATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD3-9*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCCCTCATTAAGGACTGGTTATCCATATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNNNGACTGGTTATNNNNATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDPSLRTGYPYYYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXXTGYXXYYYYYGMDVWGQGTTVTVSS | 1 | 296 | 309.0 | 318.0 | 323 | 384 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GACTGGTTAT | TGY | GACTGGTTAT | TGY | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCCCTCATTAAGGACTGGTTATCCATATTACTACTACTACTACGGTATGGACGTC | ARDPSLRTGYPYYYYYYGMDV | TGTGCGAGAGATCCCTCATTAAGGACTGGTTATCCATATTACTACTACTACTACGGTATGGACGTCTGG | 69.0 | CARDPSLRTGYPYYYYYYGMDVW | 23.0 | 463.037 | 19.914 | 119.894 | 137S296M191S | 445S15N10M169S6N | 459S62M103S | 2.977e-132 | 0.2834 | 4.929e-31 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 446.0 | 455.0 | 16.0 | 25.0 | 460 | 521 | 1 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 489.0 | 521.0 | 426.0 | 488.0 | TCCCTCATTAAG | 12 | CCAT | 4.0 | GCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | IGHD | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'P', '109 ': 'S', '110 ': 'L', '111 ': 'R', '111A': 'T', '111B': 'G', '111C': 'Y', '111D': 'P', '112D': 'Y', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGGAGCAGAATCTCC-1_contig_1 | TCTGGCACCAGGGGTCCCTTCCAATATCAGCACCATGGCCTGGACTCCTCTCTTTCTGTTCCTCCTCACTTGCTGCCCAGGGTCCAATTCCCAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCTTTTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV7-46*01 | null | IGLJ2*01 | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCTTTTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCTNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGAFVVFGGGTKLTVL | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGAXVVFGGGTKLTVL | 1 | 291 | null | null | 294 | 331 | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCT | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGA | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCT | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGA | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGC | QAVVTQEPSLTVSPGGTVTLTCGSS | ACTGGAGCTGTCACCAGTGGTCATTAT | TGAVTSGHY | CCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTAT | PYWFQQKPGQAPRTLIY | GATACAAGC | DTS | AACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGC | NKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TTGCTCTCCTATAGTGGTGCTTTTGTGGTA | LLSYSGAFVV | TGCTTGCTCTCCTATAGTGGTGCTTTTGTGGTATTC | 36.0 | CLLSYSGAFVVF | 12.0 | 452.13 | null | 73.749 | 91S291M251S3N | null | 384S38M211S | 5.803e-129 | null | 3.89e-17 | 99.656 | null | 100.0 | 92 | 382 | 1 | 291 | null | null | null | null | 385 | 422 | 1 | 38 | 92 | 166 | 167 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 392.0 | 421.0 | 362.0 | 391.0 | TT | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'A', '3 ': 'V', '4 ': 'V', '5 ': 'T', '6 ': 'Q', '7 ': 'E', '8 ': 'P', '9 ': 'S', '11 ': 'L', '12 ': 'T', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'T', '19 ': 'V', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'S', '26 ': 'S'}, 'cdrl1': {'27 ': 'T', '28 ': 'G', '29 ': 'A', '30 ': 'V', '31 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'H', '38 ': 'Y'}, 'fwl2': {'39 ': 'P', '40 ': 'Y', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'T', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'T', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'K', '68 ': 'H', '69 ': 'S', '70 ': 'W', '71 ': 'T', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'L', '83 ': 'L', '84 ': 'G', '85 ': 'G', '86 ': 'K', '87 ': 'A', '88 ': 'A', '89 ': 'L', '90 ': 'T', '91 ': 'L', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'E', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'L', '106 ': 'L', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '113 ': 'G', '114 ': 'A', '115 ': 'F', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGGAGCAGCCCAACC-1_contig_1 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGTATCTGGCTGGTAGTGGTTATTACGCTTGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGTATCTGGCTGGTAGTGGTTATTACGCTTGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNNNNNNNNNNGTAGTGGTTATTACNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGIWLVVVITLVDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXVVVITXXDYWGQGTLVTVSS | 1 | 295 | 307.0 | 320.0 | 326 | 367 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GTAGTGGTTATTAC | VVVIT | GTAGTGGTTATTAC | VVVIT | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGGTATCTGGCTGGTAGTGGTTATTACGCTTGTTGACTAC | AKGIWLVVVITLVDY | TGTGCGAAAGGTATCTGGCTGGTAGTGGTTATTACGCTTGTTGACTACTGG | 51.0 | CAKGIWLVVVITLVDYW | 17.0 | 461.479 | 27.605 | 81.44 | 136S295M143S1N | 442S14N14M118S3N | 461S6N42M71S | 8.031e-132 | 0.00126 | 1.704e-19 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 443.0 | 456.0 | 15.0 | 28.0 | 462 | 503 | 7 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 470.0 | 502.0 | 425.0 | 469.0 | GTATCTGGCTG | 11 | GCTTG | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'G', '108 ': 'I', '109 ': 'W', '110 ': 'L', '111 ': 'V', '111A': 'V', '112A': 'V', '112 ': 'I', '113 ': 'T', '114 ': 'L', '115 ': 'V', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGGAGCAGCCCAACC-1_contig_2 | GATCAGGACTTCTCAGTTCATCTTCTCACCATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTCCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2D-29*01 | null | IGKJ4*01 | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTCCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCNCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLPLTFGGGTKVEIK | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLPLTFGGGTKVEIK | 1 | 299 | null | null | 301 | 337 | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTCCC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLP | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLP | null | null | null | null | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGT | DIVMTQTPLSLSVTPGQPASISCKSS | CAGAGCCTCCTGCATAGTGATGGAAAGACCTAT | QSLLHSDGKTY | TTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTAT | LYWYLQKPGQPPQLLIY | GAAGTTTCC | EVS | AACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | ATGCAAAGTATACAGCTCCCCCTCACT | MQSIQLPLT | TGCATGCAAAGTATACAGCTCCCCCTCACTTTC | 33.0 | CMQSIQLPLTF | 11.0 | 464.595 | null | 71.827 | 90S299M174S3N | null | 390S1N37M136S | 9.126e-133 | null | 1.309e-16 | 99.666 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 391 | 427 | 2 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'T', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'D', '35 ': 'G', '36 ': 'K', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'F', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'S', '108 ': 'I', '109 ': 'Q', '114 ': 'L', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGGAGCAGGCAATTA-1_contig_1 | AGCTCTCAGAGAGGTGCCTTAGCCCTGGATTCCAAGGCATTTCCACTTGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGATCTCGATACGATATCCGACGCCTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-48*02 | IGHD3-9*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGATCTCGATACGATATCCGACGCCTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNTACGATATNNNNNNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARDLDTISDASFDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARXXXTIXXXXFDYWGQGTLVTVSS | 1 | 296 | 303.0 | 310.0 | 321 | 364 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCAR | TACGATAT | TI | TACGATAT | TI | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MNWVRQAPGKGLEWVSY | ATTAGTAGTAGTAGTAGTACCATA | ISSSSSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCTCGATACGATATCCGACGCCTCCTTTGACTAC | ARDLDTISDASFDY | TGTGCGAGAGATCTCGATACGATATCCGACGCCTCCTTTGACTACTGG | 48.0 | CARDLDTISDASFDYW | 16.0 | 463.037 | 16.069 | 85.286 | 136S296M139S | 438S4N8M125S19N | 456S4N44M71S | 2.7280000000000002e-132 | 3.722 | 1.1790000000000001e-20 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 439.0 | 446.0 | 5.0 | 12.0 | 457 | 500 | 5 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 467.0 | 499.0 | 425.0 | 466.0 | TCTCGA | 6 | CCGACGCCTC | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'D', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'D', '110 ': 'T', '111 ': 'I', '112A': 'S', '112 ': 'D', '113 ': 'A', '114 ': 'S', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGGAGCAGGCAATTA-1_contig_2 | TGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-30*01 | null | IGKJ2*01 | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPYTFGQGTKLEIK | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPYTFGQGTKLEIK | 1 | 299 | null | null | 300 | 337 | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWP | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DVVMTQSPLSLPVTLGQPASISCRSS | CAAAGCCTCGTATACAGTGATGGAAACACCTAC | QSLVYSDGNTY | TTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTAT | LNWFQQRPGQSPRRLIY | AAGGTTTCT | KVS | AACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | ATGCAAGGTACACACTGGCCGTACACT | MQGTHWPYT | TGCATGCAAGGTACACACTGGCCGTACACTTTT | 33.0 | CMQGTHWPYTF | 11.0 | 467.712 | null | 73.749 | 95S299M174S3N | null | 394S1N38M136S | 1.062e-133 | null | 3.483e-17 | 100.0 | null | 100.0 | 96 | 394 | 1 | 299 | null | null | null | null | 395 | 432 | 2 | 39 | 96 | 173 | 174 | 206 | 207 | 257 | 258 | 266 | 267 | 374 | 402.0 | 431.0 | 375.0 | 401.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'V', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'V', '31 ': 'Y', '32 ': 'S', '34 ': 'D', '35 ': 'G', '36 ': 'N', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'R', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'R', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'V', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'D', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'G', '108 ': 'T', '109 ': 'H', '114 ': 'W', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGGAGCAGTACGACG-1_contig_2 | AGCTCTGGGAGAGGAGCTCCAGCCTTGGGATTCCCAGCTGTCTCCACTCGGTGATCGGCACTGAATACAGGAGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGTGCGGGGGTACCAGCTGCTAGAGGAGACCTTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-73*02 | IGHD2-2*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGTGCGGGGGTACCAGCTGCTAGAGGAGACCTTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGNNNNNNNGTACCAGCTGCTANNNNNNNNNNTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCTSAGVPAARGDLYYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCTXXXVPAAXXXXYYYYYGMDVWGQGTTVTVSS | 1 | 299 | 307.0 | 319.0 | 330 | 390 | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAG | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCT | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAG | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCT | GTACCAGCTGCTA | VPAA | GTACCAGCTGCTA | VPAA | TTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLKLSCAAS | GGGTTCACCTTCAGTGGCTCTGCT | GFTFSGSA | ATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGT | MHWVRQASGKGLEWVGR | ATTAGAAGCAAAGCTAACAGTTACGCGACA | IRSKANSYAT | GCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGT | AYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACTAGTGCGGGGGTACCAGCTGCTAGAGGAGACCTTTACTACTACTACTACGGTATGGACGTC | TSAGVPAARGDLYYYYYGMDV | TGTACTAGTGCGGGGGTACCAGCTGCTAGAGGAGACCTTTACTACTACTACTACGGTATGGACGTCTGG | 69.0 | CTSAGVPAARGDLYYYYYGMDVW | 23.0 | 467.712 | 25.682 | 117.971 | 137S299M163S3N | 443S14N13M143S4N | 466S1N61M72S | 1.117e-133 | 0.004988 | 1.792e-30 | 100.0 | 100.0 | 100.0 | 138 | 436 | 1 | 299 | 444.0 | 456.0 | 15.0 | 27.0 | 467 | 527 | 2 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 495.0 | 527.0 | 432.0 | 494.0 | TGCGGGG | 7 | GAGGAGACCT | 10.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'K', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'G', '37 ': 'S', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'S', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'N', '62 ': 'S', '63 ': 'Y', '64 ': 'A', '65 ': 'T'}, 'fwh3': {'66 ': 'A', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'S', '107 ': 'A', '108 ': 'G', '109 ': 'V', '110 ': 'P', '111 ': 'A', '111A': 'A', '111B': 'R', '111C': 'G', '111D': 'D', '112D': 'L', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGGAGCAGTACGACG-1_contig_1 | ATGAAATTTGCTTTTGTACTCACTGGTTGTTTTTGCATAGGCCCCTCCAGGCCACGACCAGCTGTTTGGATTTTATAAACGGGCCGTTTGCATTGTGAACTGAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ2*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKLEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKLEIK | 1 | 302 | null | null | 303 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAATATTATAGTACTCCGTACACT | QQYYSTPYT | TGTCAGCAATATTATAGTACTCCGTACACTTTT | 33.0 | CQQYYSTPYTF | 11.0 | 472.386 | null | 73.749 | 191S302M174S3N | null | 493S1N38M136S | 4.897e-135 | null | 4.102e-17 | 100.0 | null | 100.0 | 192 | 493 | 1 | 302 | null | null | null | null | 494 | 531 | 2 | 39 | 192 | 269 | 270 | 305 | 306 | 356 | 357 | 365 | 366 | 473 | 501.0 | 530.0 | 474.0 | 500.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGGAGCAGTCCTCCT-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGCGGATCGGGCTATATGATAGCCACAACCCTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD3-22*01 | IGHJ3*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGCGGATCGGGCTATATGATAGCCACAACCCTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGNNNNNNNNNNNNNTATGATAGNNNNNNNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARRIGLYDSHNPDAFDIWGQGTMVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXXXYDXXXXDAFDIWGQGTMVTVSS | 1 | 293 | 307.0 | 314.0 | 324 | 373 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | TATGATAG | YD | TATGATAG | YD | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGGCGGATCGGGCTATATGATAGCCACAACCCTGATGCTTTTGATATC | ARRIGLYDSHNPDAFDI | TGTGCGAGGCGGATCGGGCTATATGATAGCCACAACCCTGATGCTTTTGATATCTGG | 57.0 | CARRIGLYDSHNPDAFDIW | 19.0 | 458.363 | 16.069 | 96.822 | 137S293M151S3N | 443S7N8M130S16N | 460S50M71S | 7.053e-131 | 3.788 | 4.042e-24 | 100.0 | 100.0 | 100.0 | 138 | 430 | 1 | 293 | 444.0 | 451.0 | 8.0 | 15.0 | 461 | 510 | 1 | 50 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 477.0 | 509.0 | 426.0 | 476.0 | GCGGATCGGGCTA | 13 | CCACAACCC | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'I', '109 ': 'G', '110 ': 'L', '111 ': 'Y', '111A': 'D', '111B': 'S', '112B': 'H', '112A': 'N', '112 ': 'P', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGGAGCAGTCCTCCT-1_contig_2 | TTTGGCTCTTGATTTACATTGGGTACTTTCACAACCCACTGCTCATGAAATTTGCTTTTGTACTCACTGGTTGTTTTTGCATAGGCCCCTCCAGGCCACGACCAGCTGTTTGGATTTTATAAACGGGCCGTTTGCATTGTGAACTGAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCAGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ4*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCAGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPQLTFGGGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPXLTFGGGTKVEIK | 1 | 304 | null | null | 306 | 343 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAATATTATAGTACTCCTCAGCTCACT | QQYYSTPQLT | TGTCAGCAATATTATAGTACTCCTCAGCTCACTTTC | 36.0 | CQQYYSTPQLTF | 12.0 | 475.502 | null | 73.749 | 235S304M175S1N | null | 540S38M136S | 6.063e-136 | null | 4.396e-17 | 100.0 | null | 100.0 | 236 | 539 | 1 | 304 | null | null | null | null | 541 | 578 | 1 | 38 | 236 | 313 | 314 | 349 | 350 | 400 | 401 | 409 | 410 | 517 | 548.0 | 577.0 | 518.0 | 547.0 | A | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '113 ': 'T', '114 ': 'P', '115 ': 'Q', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | AAGGAGCCAAGCGAGT-1_contig_2 | ATCATCCAACAACCACATCCCTTCTCTACAGAAGCCTCTGAGAGGAAAGTTCTTCACCATGGACTGGACCTGGAGGGTCTTCTGCTTGCTGGCTGTAGCTCCAGGTGCTCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATAAGGGCCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-46*01 | null | IGHJ5*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATAAGGGCCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDKGPNWFDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARXXXXNWFDPWGQGTLVTVSS | 1 | 296 | null | null | 306 | 355 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | null | null | null | null | CAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGCTACTAT | GYTFTSYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATA | MHWVRQAPGQGLEWMGI | ATCAACCCTAGTGGTGGTAGCACA | INPSGGST | AGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | SYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATAAGGGCCCCAACTGGTTCGACCCC | ARDKGPNWFDP | TGTGCGAGAGATAAGGGCCCCAACTGGTTCGACCCCTGG | 39.0 | CARDKGPNWFDPW | 13.0 | 463.037 | null | 96.822 | 115S296M130S | null | 420S1N50M71S | 2.5770000000000002e-132 | null | 3.758e-24 | 100.0 | null | 100.0 | 116 | 411 | 1 | 296 | null | null | null | null | 421 | 470 | 2 | 51 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 437.0 | 469.0 | 404.0 | 436.0 | TAAGGGCCC | 9 | null | null | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'I'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'V', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'K', '109 ': 'G', '110 ': 'P', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | AAGGAGCCAAGCGAGT-1_contig_1 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ2*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCNNNNGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTLPYTFGQGTKLEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTXXYTFGQGTKLEIK | 1 | 301 | null | null | 306 | 343 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYST | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYST | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAATATTATAGTACTCTCCCGTACACT | QQYYSTLPYT | TGTCAGCAATATTATAGTACTCTCCCGTACACTTTT | 36.0 | CQQYYSTLPYTF | 12.0 | 470.828 | null | 73.749 | 90S301M178S4N | null | 395S1N38M136S | 1.2269999999999999e-134 | null | 3.49e-17 | 100.0 | null | 100.0 | 91 | 391 | 1 | 301 | null | null | null | null | 396 | 433 | 2 | 39 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 403.0 | 432.0 | 373.0 | 402.0 | TCCC | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '113 ': 'T', '114 ': 'L', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.