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is present in our individual SoFlo basins. This fact called for a holistic approach to basin
segmentation to account for variability not only dictated by a given nutrient
concentration level, but by the combination of imposed conditions such as: nutrients,
water clarity, climate, weather, extreme events, geomorphology, circulation and
exchange, and management. As done for Biscayne Bay, basin segmentation was
accomplished with an objective classification of station sites combining Principal
Component Analysis (PCA) and Hierarchical Clustering methods in tandem. Selected
biogeochemical variables (8 to 13) for each of the five basins (Florida Bay, Florida Keys,
Whitewater Bay-10,000 Islands, Gulf Shelf and Pine Island-Rookery Bay) were used for
PCA. Statistics (mean, standard deviation, median and median absolute deviation) of
retained scores from PCA were input into Hierarchical clustering routines. The rationale
behind the selection of these statistics was to account not only for level of individual
parameter but also for their variability. Then, progressive subdivisions were obtained
varying the statistical distance among groups in the cluster tree. Selection of the final
number of segments was subjective and knowledge-based. Spatial extension and
pattern, geomorphology, water circulation and benthic ecosystem distribution played a
major role on the decision. In summary, we statistically characterized and subdivided
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waters in each basin into what we considered biogeochemically and spatially coherent
segments.
We identified 40 water-types for SoFlo coastal and estuarine waters that extend
from Biscayne Bay in the east to Dry Tortugas in the southwest and to Pine Island
Sound in the northwest (Table 6.1, Fig 6.3). Segment maps were generated placing the
separating lines approximately midway in between clustered stations, or followed the
FATHOM Model subdivision (Cosby et al. 2005), followed previous subdivisions or were
arbitrarily drawn following general geomorphologic patterns. In summary, border lines
are site-specific and not the result of systematic spatial statistical analysis.
Non-parametric Mann-Whitney and Kruskal-Wallis tests were used to compare
biogeochemical variables among segments, and box-and-whisker plots to summarize
descriptive statistics. The former analyses highlighted statistically significant differences
among segments, and the later underscored anomalous and probably impacted stations
and segments. Sustained high concentration levels would suggest sustained impacted
and perhaps impaired conditions – not meeting designated use type. Anomalous
stations isolated from permanent sources of human disturbance (urban areas, canal
mouths) were interpreted as responding to site-specific natural behavior. On the other
hand, eventual occurrence of high nutrient levels would indicate anomalous conditions
responding to short-lived disturbances.
Besides those precipitation changes occurring in the early-to-mid nineties from
lower to higher precipitation rates which lead to region-wide declines in water nutrients
and chlorophyll a concentrations (Briceño and Boyer 2010), we compared nutrients
time-series with records of storms and hurricanes which affected South Florida during
the period 1989-2008. Separate statistics were calculated for before and after identified
events to test the nature, duration and magnitude of the impact. After identifying that
human and hurricane impacts combined to strongly disturb conditions in northeastern
Florida Bay-Southwestern Biscayne Bay since 2005, we discarded data obtained from
that area (MBS) during the disturbed period (2005-2008) for statistical calculations. The
dataset resulting from this selective process defined the Period of Calculation (POC)
dataset to be used for the remaining calculations.
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Table 6.1: Aggregation of SoFlo basins into 40 segments resulting from PC/Cluster
Figure 6.3: Biogeochemical segmentation of South Florida’s estuarine and coastal
waters.
Region No. Segment Sub-basin Region No. Segment Sub-basin
1 MAR Marquesas 1 CS Card Sound
2 BKB Back Bay 2 NCI North central Inshore
FLORIDA 3 BKS Back Shelf 3 NCO North Central Outer-Bay
KEYS 4 LK Lower Keys BISCAYNE 4 NNB Northern North Bay
(FK) 5 MK Middle Keys BAY 5 SCI South Central Inshore
6 UK Upper Keys (BB) 6 SCM South Central Mid-Bay
7 Offshore Offshore 7 SCO South Central Outer-Bay
1 CFB Central Florida Bay 8 SNB Southern North Bay
FLORIDA BAY 2 ECFB East-Central Florida Bay 9 MBS Manatee-Barnes Sound
(FB) 3 NFB North Florida Bay 1 CI Collier Inshore
4 CL Coastal Lakes 2 EB Estero Bay
5 SFB South Florida Bay PINE ISLAND 3 MARC Marco Island
6 WFB West Florida Bay ROOKERY BAY 4 NPL Naples Bay
1 BLK Black River (PIRB) 5 PINE Pine Island Sound
WHITEWATER 2 CTZ Coastal Transition Zone 6 SCB San Carlos Bay
BAY 3 GI Gulf Islands 7 COCO Cocohatchee
(WWB-TTI) 4 IWW Internal Waterways SHELF 1 IGS Inner Gulf Shelf
5 MR Mangrove Rivers (SHELF) 2 MGS Midddle Gulf Shelf
6 PD Ponce de Leon 3 OGS Outer Gulf Shelf
7 SRM Shark River Mouth
8 WWB Whitewter Bay
OFF
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NUMERIC NUTRIENT CRITERIA
As a contribution to the regulatory process under way for the derivation of
numeric criteria by the USEPA and FDEP, we have: (1) Sub-divided the six major South
Florida basins into forty spatially-coherent water-types (segments). This classification
has been adopted by both agencies with minor modifications; and (2) we have derived a
series of protective nutrient thresholds to be considered in the derivation of protective
numeric nutrient criteria.
The USEPA recommends three types of approaches for setting numeric nutrient
criteria (USEPA 2001, 2010): (1) reference condition approaches; (2) stressor-response
analysis; and (3) mechanistic modeling. The reference conditions approach entails the
existence of undisturbed segments of reference, something not to be found in South
Florida after over a century of continuous human intervention. A suggested alternative is
to select the less impacted station or segment complying with its designated use as
reference, but given the recognized site-specific response to nutrient variability that
characterizes estuaries, there is no guarantee that the extrapolations would be correct.
The stressor-response approach requires cause-effect data (i.e. nutrient-dose
experiments), and that information is mostly absent or very scarce for relevant South
Florida biotic components such as phytoplankton biomass (Brand 1986; Brand et al.
1991) or ambiguous for major benthic primary producers (seagrass, epiphytes,
macroalgae, and benthic microalgae) (Armitage et al. 2005; Ferdie and Fourqurean
2004; Herbert and Fourqurean 2008). Findings from a handful of studies in Florida Bay
indicate that N addition had little effect on any benthic primary producers throughout the
bay, and P-induced alterations of community structure were not uniform and did not
always agree with expected patterns of P-limitation (Armitage et al. 2005). Nutrient-dose