phonix-summary / README.md
mohnishi's picture
Upload README.md with huggingface_hub
85ee08e verified
metadata
pretty_name: Phonix Database
arxiv:
  - arXiv:2504.21245
tags:
  - materials
  - phonon
  - thermal-conductivity
  - first-principles
license: cc-by-4.0

Summary of the Phonix database

The files on this page are a summary of the Phonix database.

Column descriptions of summary.csv

Column Description
mp_id Materials Project ID (e.g. mp-149 for Si diamond)
unique_id Unique entry identifier
formula Chemical formula (e.g. Si, MgO, BeTe)
spg_number International space group number (e.g. 227 for diamond silicon)
natoms_prim Number of atoms in primitive cell
natoms_conv Number of atoms in conventional cell
natoms_sc Number of atoms in supercell for force constant calculations
trans_conv2prim Transformation matrix: conventional to primitive cell (JSON 3x3)
trans_conv2sc Transformation matrix: conventional to supercell (JSON 3x3)
structure Crystal structure JSON (cell, positions, symbols, pbc)
volume[A^3] Cell volume in cubic angstroms
nac Non-analytical correction flag (0: no NAC, 1: damping method, 2: mixed-space approach, 3: Ewald method)
volume_relaxation Additional volume relaxation flag (0: no additional relaxation, 1: additionally relaxed)
scph Self-consistent phonon (SCPH) flag
four 4-phonon scattering flag
modulus[GPa] Bulk modulus [GPa]
fc2_error[%] 2nd-order (Harmonic) force constants fitting error [%]
fc3_error[%] 3rd-order (Cubic) force constants fitting error [%]
fc_higher_error[%] Higher-order force constants fitting error [%]
kp[W/mK] Particle contribution to lattice thermal conductivity [W/mK]
kc[W/mK] Coherence contribution to lattice thermal conductivity [W/mK]
klat[W/mK] Total lattice thermal conductivity (kp+kc) [W/mK]
qmesh q-point mesh for the Boltzmann transport equation (e.g. '19x19x19')
qmesh_density q-point mesh density
min_phfreq[cm^-1] Minimum phonon frequency [cm^-1]
max_phfreq[cm^-1] Maximum phonon frequency [cm^-1]
phfreq[cm^-1] Phonon frequency grid points (JSON array, shape=[51])
phdos[a.u.] Total phonon density of states (JSON array, shape=[51])
pdos[a.u.] Element-projected phonon DOS (JSON dict of arrays)
kspec_freq[W/mK/cm^-1] Spectral thermal conductivity (kp) vs frequency (JSON array)
kcumu_norm_freq Normalized cumulative kappa (kp) vs frequency (JSON array)
mfp[nm] Mean-free-path grid (JSON array)
log10[mfp[nm]] Log10 of mean-free-path grid (JSON array)
kspec_mfp[W/mK/nm] Spectral thermal conductivity vs MFP (JSON array)
kcumu_norm_mfp Normalized cumulative kappa vs MFP (JSON array)
calc_time[sec] Computational time [sec]

Note

  • The transformation matrix is defined using the Phonopy convention.
  • The anharmonic properties correspond to the values at 300 K.
  • Please refer to the official ALAMODE page for details on the fitting error.