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setwd('d:\\temp') hkh <- read.csv('hkhousing.csv') summary(hkh) library(arm) corrplot(hkh[,3:8]) pairs(hkh[,3:10]) pca <- princomp(hkh[,3:10], cor = T) # pca <- prcomp(hkh[,3:8], scale. = T, retx = T) # summary(pca) print(pca) plot(pca) screeplot(pca) biplot(pca) loadings(pca) pca$scores[,1] <- pca$scores[,1] * (-1) ...
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# setting up the axis label size and margin (bottom, left, top, right) par(cex.lab = 1.5, mai = c(b = 1, l = 1, t = 0.7, r = 0.5)) # histogram with relative frequencies hist(nhtemp, freq = F, main = "", ylab = expression(hat(f)(x)), xlab = expression(x %in% K[i]))
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LocalDriveDaPrice <- "//fs2/world/Analytics/Apps/Qlikview/FTR/SPP_DATA/Markets/DA/LMP_By_SETTLEMENT_LOC" LocalDriveRefPrice <- "//fs2/world/SMD/Staff/SPP_Auction_Revenue_Rights/PY_2017_2018_ARR_Registration/TCR_REFERENCE_PRICES" TestListPaths <- list(list(Source = 'NPPD_NPPD', Sink = 'SPRM_SPRM'), lis...
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x = runif(10) la = lapply(x, sqrt);la sa = sapply(x, sqrt);sa va = vapply(x, sqrt);va is.list(la);is.list(sa) is.vector(la);is.vector(sa) va = vapply(x, sqrt, double(1));va is.list(va);is.vector(va) # for xs = runif(1e5) res <- c() system.time(for (x in xs) { res <- c(res, sqrt(x)) }) res <...
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/print.NCM.R \name{print.NCM} \alias{print.NCM} \title{Print method for class NCM} \usage{ \method{print}{NCM}(x, ...) } \arguments{ \item{x}{Output of the function neutral_model.} \item{...}{Other parameters passed to the generic print funct...
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predict.plot.data.frame <- function(x,given,given.lab,layout,partial, type=c("prob","logit","probit"), identify.pred=F,scol="red",...) { type <- match.arg(type) resp <- response.var(x) pred <- predictor.vars(x) if(!missing(given) && !is.fac...
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## Created by: Lora Milam ## Group: 12 ## Course: CS 4331 003: Information Retrieval ## ## ## Import dataset from download directory winequality.white <- read.csv("C:/Users/default.LAPTOP-QPG8VPNC/Downloads/winequality-white.csv", sep=";") ##Use Regression Modeling to find relevant predictor variables model01<-lm(fo...
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# funciton for writing NLS ANOVA tables into LaTeX tables---- # output can include more regression results as defined by user write_latex_nls <- function(reg_obj # regression object , name_tex # name for latex table , name_var=NULL # names of variabl...
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# The two functions are used to cache the inverse of a matrix, # because matrix inversion can be too long to compute. # makeCacheMatrix creates a list containing 4 functions: # 1. One function setting the value of the matrix. # 2. One function getting the value of the matrix. # 3. One function setting the value of in...
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# =================== DETERMINING TYPE GROUP========================================== # cat("Loading functions...") cat("\n") # Types Classification # Type number refers to the 10th base conversion of a strategy # For instance LLL -> 0 LLM -> 1 class_table <- bind_rows( list(type = 0, wide = 'selfish', narrow = ...
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# This file constructs a barplot from data on "Global Active Power" # It assumes a file called household_power_consumption.txt with the data in the source folder # Imports library("plyr") # 1. Read the data data <- read.csv("household_power_consumption.txt", sep = ";", colClasses = c("character", "character", "numeri...
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#' Reverse IP #' #' The Reverse IP API provides a list of domain names that share the same #' Internet host (i.e. the same IP address). #' #' @param ip IP address to perform the reverse IP query #' @param limit Limits the size of the domain list than can appear in a #' response. The limit is applied per-IP addre...
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\name{helpr_render_json} \alias{helpr_render_json} \title{Render JSON} \usage{ helpr_render_json(obj) } \arguments{ \item{obj}{object to be rendered} } \description{ Remove the warnings from the rendering of the JSON } \author{ Barret Schloerke } \keyword{internal}
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library(twitteR) api_key<- "dcc4QaXU4zYQ4r9Iw9RGkmJAA" api_secret <- "42Bwmwv0Mtl5Zw50Cp1spVtDEnylfDI11gITDVswQ0LwIb2WT7" access_token <- "372578663-2Am0nkaYZcsaKtdkVdRM6y7v3ho5jj6ZAKHKJ3H6" access_token_secret <- "QyQvTldRa2d5k3dMZV4NsSfjWsyadnjdJAPAXAVvDgdsm" setup_twitter_oauth(api_key,api_secret,access_token,a...
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\name{bsmds} \alias{bsmds} \alias{bsfun} \title{Bootstrap Confidence Regions for Multidimensional Scaling Solutions} \description{This function implements a bootstrapping solution that identifies and optionally removes potentially degenerate solutions.} \usage{ bsmds(data, dist.fun, dist.data.arg = "x", dist.args = NUL...
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/quicksight_operations.R \name{quicksight_describe_group} \alias{quicksight_describe_group} \title{Returns an Amazon QuickSight group's description and Amazon Resource Name (ARN)} \usage{ quicksight_describe_group(GroupName, AwsAccountId, Name...
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library(leaflet) library(RColorBrewer) library(scales) library(lattice) library(dplyr) library(ggplot2) collegedata <- read.csv("clean4.csv") colnames(collegedata)[c(which(colnames(collegedata)=="LATITUDE"):which(colnames(collegedata)=="LONGITUDE"))] <- c("latitude","longitude") collegedata$COSTT4_A <- as.num...
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library(mongolite) library(car) library(StatMeasures) library(lubridate) m <- mongo("dublin_weather",url = "mongodb://localhost:27017",db="bigdata_ca2_ang_tunjing") #https://stackoverflow.com/questions/34454034/r-mongolite-date-query dstart <- as.integer(as.POSIXct(strptime("2018-01-01","%Y-%m-%d")))*1000 dend <- as.in...
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\name{rowChisq2Class} \alias{rowChisq2Class} \alias{rowChisqMultiClass} \title{Rowwise Pearson's ChiSquare Test Based on Tables} \description{ Given a set of matrices, each of which represents one group of subjects, and summarizes rowwise the numbers of these observations showing the levels of the catego...
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/resmerge.ij.R \name{resmerge.ij} \alias{resmerge.ij} \title{File management} \usage{ resmerge.ij(path, prefix = "\\\\.|-") } \arguments{ \item{path}{Path to the target directory} \item{prefix}{Regular expression to manage file names} } \valu...
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library(tidytext) library(stringr) library(dplyr) library(tidyr) GetNGram <- function(rawFromETL, x) { tokenData <- rawFromETL %>% unnest_tokens(word, cleanData, token = "ngrams", n = x) # if (x == 1) # { # data(stop_words) # tokenData <- tokenData %>% # anti_join(stop_words) ...
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load.isLD1.flag <- function(file1, snpset.flag) { # cohort 1 gt1 <- read.GT0(file1) gt1 <- gt1[, snpset.flag] ASSERT(ncol(gt1) == sum(snpset.flag)) # IN-SAMPLE LD gt0 <- gt1 gt0 <- stdGT(gt0) PL("mean gt0", range(apply(gt0, 2, mean))) PL("sd gt0", range(appl...
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library(shiny) library(dplyr) library(ggplot2) library(rlist) library(googleVis) source("getGzCsv.R") source("utils_tab_deep_dive.R") source("utils_tab_data.R") source("utils_tab_comparing_cities.R") function(input, output, session) { # Initialization berlin <- get_data("https://github.com/L-HommeSage/Airbnb_Data_...
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library(ape) testtree <- read.tree("3066_1.txt") unrooted_tr <- unroot(testtree) write.tree(unrooted_tr, file="3066_1_unrooted.txt")
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library(tidyverse) library(janitor) ### Read in data ### Reading Data Locally gsodi_long <- read_csv("gsodi_long.csv") ### Reading Data from URL gsodi_wide <- read_csv("https://www.idea.int/gsod-indices/sites/default/files/gsodi_pv_3.csv") ### NOTE final format is important. These commands open .csv (comma sepera...
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########################################################### # AAS over time by Instance/Wait Class etc (Top Activity) ########################################################### # # build CPU, WAIT summary dataset of all instances over all samples d <- ashDF %>% group_by(INSTANCE_NUMBER,SAMPLE_TIME,SAMPLE_ID,WAITCLASS...
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testlist <- list(Rs = numeric(0), atmp = numeric(0), relh = numeric(0), temp = c(1.03878561526028e-13, 1.23255483898152e-250, -4.20274050050721e+305, 9.32946680697566e+98, 1.22430160524861e-250, -7.14714235507037e-15, 3.29092470798389e-270, 3.55259342257796e+59, 6.38734728873395e+149, 1.2213594310705e+35, 7.2704491...
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#Symmetrise Scale when using facet_wrap function symmetrise_scale <- function(p, axis = "x") { gb <- ggplot2::ggplot_build(p) type <- switch(axis, "x" = "x.range", "y" = "y.range") fname <- setdiff(names(gb$layout$panel_layout), c("PANEL", "ROW", "COL", "SCALE_X", "SCALE_Y")) lims <- do.call(cbind, lapply(g...
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HW1 Q1.R
library("igraph") #1(a) p <- c(0.01, 0.05, 0.1) nodes <- 1000 graph_1 <- random.graph.game(n = nodes, p = p[1],directed = FALSE) graph_2 <- random.graph.game(n = nodes, p = p[2],directed = FALSE) graph_3 <- random.graph.game(n = nodes, p = p[3],directed = FALSE) degree_1 <- degree(graph = graph_1) degre...
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cachematrix.R
## Allow to cache the invertion of a matrix ## Create a specific matrix object with a fied containing the inverted matrix if already computed makeCacheMatrix <- function(x = matrix()) { cachedInvertion = null ## retrieve the original matrix get <- function() { x } ## cache the inverted matrix se...
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source("../depend_graph.R") #igraph_options(plot.layout=layout_as_tree) s = readScript("DTLfirst.R") # I see 5 edges coming into 24 on the graph, which corresponds to the 5 # inputs in s[[24]]. info = lapply(s, getInputs) g = depend_graph(s, add_source = TRUE) write_graph(g, "graph.dot", format = "dot") # 167 edg...
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#' Split Data into Partitions #' #' This function provides row indices for data splitting, e.g., to split data #' into training, validation, and test. Different types of split strategies are #' supported, see Details. #' The partition indices are either returned as list with one element per partition #' (the defa...
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# 14 | Longest Collatz sequence <<<<<<< HEAD ======= # >>>>>>> aa005b7... Added support to linebreaks if files are executed via command line. # https://projecteuler.net/problem=14 # # The following iterative sequence is defined for the set of positive integers: # # n → n/2 (n is even) # n → 3n + 1 (n is odd) # # ...
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#' Check a driver for compliance with DBI. #' #' @param driver Driver name. #' @param pkg Package that driver lives in - is usually "Rdriver" #' @export #' @examples #' if (require("RSQLite")) { #' dbiCheckCompliance("SQLite") #' dbiCheckCompliance("NoDriver", "RSQLite") #' } dbiCheckCompliance <- function(driver, pkg...
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library(nnet) # create predictor matrix from terms create_pmatrix_from_terms = function(xx, terms) { nt = length(terms); nr = nrow(xx); pmatrix = matrix(0, nr, 0); if (nt > 0) for(it in 1:nt) { term = terms[it]; if (grepl("*",term,fixed=T)) { splits = strsplit(term,"*",fixed=T)[[1]]; ...
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\name{my.bisec} \alias{my.bisec} %- Also NEED an '\alias' for EACH other topic documented here. \title{ Bisection method to find the root } \description{ This function is to apply bisection method to find the root of a function f. } \usage{ my.bisec(f, int.l, int.u, eps = 1e-06) } %- maybe also 'usage' for other object...
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Lasso regressin Analysis.R
#### library Needed library(caret) library(glmnet) library(mlbench) library(psych) data("BostonHousing") str(BostonHousing) pairs.panels(BostonHousing) ### scatter plot of every variables which are numeric pairs.panels(BostonHousing[c(-4,-14)],cex=2) ### data partition set.seed(222) ind <- sample(2,...
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# this function... getROI <- function(raster, ROI) { # project the layer using the ndvi raster projection ROI_proj2raster <- spTransform(ROI, CRS(proj4string(raster))) # mask the Lelysta forest masked_ROI <- mask(raster, ROI_proj2raster) # get the values for a raster brick into a new data frame! valuetable <- g...
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#### BIO_ANALYSIS #### # Desc: File just for the Analysis of the Profiles with Bios library(tidyverse) library(readr) library(glmnet) library(ROCR) library(lda) library(randomForest) library(tm) library(topicmodels) library(tidytext) set.seed(42) final_data <- read_csv("~/Documents/MSD/github_project/data/final_data.c...
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ma1.1.s.Rd.R
library(TSA) ### Name: ma1.1.s ### Title: A simulated MA(1) series / time series ### Aliases: ma1.1.s ### Keywords: datasets ### ** Examples data(ma1.1.s) ## maybe str(ma1.1.s) ; plot(ma1.1.s) ...
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Seminar 11 In class Exercises.R
install.packages("MASS") install.packages("klaR") library(MASS) library(klaR) creditcard_data<-read.csv("C:/Documents/creditcard.csv") test_rows<-sample(1:nrow(creditcard_data), round(nrow(creditcard_data)*0.2) ,replace=FALSE) creditcard_data_training<-creditcard_data[-test_rows,] creditcard_data_test<-creditcard...
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Data Manipulation with Dplyr and Tidyr.R
install.packages("dplyr") library(dplyr) mtcars library(DT) datatable(mtcars, options = list(scrollX=T)) library(magrittr) library(dplyr) arrange( summarize( group_by( filter(mtcars, carb > 1), cyl ), Avg_mpg = mean(mpg) ), desc(Avg_mpg) ) a <- filter(mtcar...
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library(rvest) polling_avg <- read_html("https://en.wikipedia.org/wiki/Nationwide_opinion_polling_for_the_2020_Democratic_Party_presidential_primaries") table <- polling_avg %>% html_nodes("#mw-content-text > div > table:nth-child(18)") %>% html_table(fill=TRUE) table <- table[[1]] #Initialize...
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# This library is free software; you can redistribute it and/or # modify it under the terms of the GNU Library General Public # License as published by the Free Software Foundation; either # version 2 of the License, or (at your option) any later version. # # This library is distributed in the hope that it will be use...
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library(DataExplorer) #library(naniar) library(caret) #library(ggplot2) #library(dplyr) library(e1071) #training Naive Bayes classifier {e1071} NBclassifier_e1071 = naiveBayes(income ~ ., data = trainAdf) summary(NBclassifier_e1071) #naiveBayes(formula, data, laplace = 0, ..., subset, na.action = na.pass...
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plot.new() plot.window( xlim=c(0,9), ylim=c(0,9), asp = 1 ) par(lty = 2) do.call(rect, placeCellPanel(9, 9)[[1]]) do.call(rect, placeCellPanel(9, 9)[[2]]) do.call(rect, placeCellPanel(9, 9)[[3]]) title("Plattenfronten - Porositaet massstabsgetreu") do.call(draw.circle, do.call(placeCircles , c(list(input$phi1ui, i...
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library(dplyr) pg <- src_postgres() # The name of the local directory where filings are stored. `` raw_directory <- "/Volumes/2TB/data/" filings <- tbl(pg, sql("SELECT * FROM filings.filings")) extracted <- tbl(pg, sql("SELECT * FROM filings.extracted")) # Pull together a list of all proxy filings on EDGAR file.lis...
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# Calculate the Mylan Unlevered Beta myl_unl_beta <- ___ myl_unl_beta
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# Load packages ---- library(tidyverse) library(here) # Load data ---- load(file = here("data","player_data_2021.Rdata")) load(file = here("data","player_data_full.Rdata")) load(file = here("data","player_data_partial.Rdata")) # Wrangle data into model-able dataset with normalised and cleaned variables ---- # No...
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## Read Data url<- "https://d396qusza40orc.cloudfront.net/repdata%2Fdata%2Factivity.zip" fileName <- "activity.csv" zipFile <- "activity.zip" if (!file.exists(fileName)) { if (!file.exists(zipFile)) { download.file(url,destfile=zipFile) } unzip(zipFile) } activityData <- read.csv(fileName, colClasses = c("integ...
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## ----setup, include = FALSE---------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) ## ----eval=FALSE---------------------------------------------------------- # # install.packages("devtools") # devtools::install_github("aedobbyn/dobtools")
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library(Rnmr1D) data_dir <- system.file("extra", package = "Rnmr1D") RAWDIR <- file.path(data_dir, "CD_BBI_16P02") CMDFILE <- file.path(data_dir, "NP_macro_cmd.txt") SAMPLEFILE <- file.path(data_dir, "Samples.txt")
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rm(list=ls()) library(xgboost) set.seed(13) startTime <- Sys.time() scriptName<-"PerStoreLM" set.seed(13) os <- Sys.info()[["sysname"]] nodename <- Sys.info()[["nodename"]] trainFile <- ifelse(nodename=="bigtumor",("/home/tumor/MLExperimental/rossman/data/train.csv"), ifelse(os=="Darwin", ...
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library(ape) testtree <- read.tree("4536_10.txt") unrooted_tr <- unroot(testtree) write.tree(unrooted_tr, file="4536_10_unrooted.txt")
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/surv.R \name{surv_table} \alias{surv_table} \title{Summary table} \usage{ surv_table( s, digits = ifelse(percent, 0L, 3L), times = pretty(s$time), maxtime = FALSE, percent = FALSE, ... ) } \arguments{ \item{s}{a \code{\link[surviv...
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/cols.R \name{nat_palette} \alias{nat_palette} \title{A 'natural' colour palette generator} \usage{ nat_palette(name, n) } \arguments{ \item{name}{The desired palette. One of: \itemize{ \item \code{Acripeza}: The mountain katydid \emph{Acrip...
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# Messy Data Project library('tidyverse') setwd("C:\Users\andre\Dropbox\Lavoro\Teaching\1-templates-lessons\messy-tidy-projects\Messy Data Project") load("DSP_original.Rdata") DSP_rec <- DSP_Dataset_v1 %>% select(country_name, country_text_id, country_id, year, v2smgovdom, v2smregcon, v2smhargr_0, v2smpolsoc) %>% ...
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\name{knapsack-package} \alias{knapsack-package} \alias{knapsack} \docType{package} \title{ \packageTitle{knapsack} } \description{ \packageDescription{knapsack} } \details{ The DESCRIPTION file: \packageDESCRIPTION{knapsack} \packageIndices{knapsack} ~~ An overview of how to use the package, including the most import...
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/calibrating.R \name{amean_byelt} \alias{amean_byelt} \title{Arithmetic mean by components occurring within an assembly motif} \usage{ amean_byelt(fobs, mOccur) } \arguments{ \item{fobs}{a numeric vector. The vector \code{fobs} cont...
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#' Manhattan plot for genome-wide association studies #' #' The results of a genome-wide association study are visualised the genomic #' location of the tested genetic variant on the x-axis versus its -log10(p) #' of the association on the y-axis. Optionally, lines for suggestive and #' genome-wide significance can be...
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4. Clean WCQ data.R
# This file cleans WCQ data using regular expressions # Created by Julian Gerez # Convert from factors to character wcq_data[,2] <- as.character(wcq_data[,2]) # Read in match dates # There are three types: DD.MM.YY, DD- M-YY, and DD-MM-YY wcq_data$date1 <- str_match(wcq_data$combinedtext, "[0-9]{2}.[0-9]{1,2}.[0-...
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install.packages('modleR')#soon! install.packages('rJava')#soon! install.packages('raster')#soon! install.packages('rlang')#soon! install.packages('dplyr')#soon! install.packages('rgdall') library(rlang) library(modleR) library(rJava) library(raster) library(rgdal) # === aula 6 Análise Exploratória de Dados === data...
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library(rqPen) ### Name: groupMultLambda ### Title: Quantile Regression with Group Penalty for multiple lambdas ### Aliases: groupMultLambda ### ** Examples ## Not run: ##D x <- matrix(rnorm(400),nrow=100) ##D y <- 1 + x[,1] - 3*x[,3] + rnorm(100) ##D cv_model <- groupMultLambda(x,y,groups=c(rep(1,2),rep(2,2)),lam...
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x <- c(5,12,13,12) xf <- factor(x) # xf # str(xf) # unclass(xf) # ?unclass # attr(xf,"levels") # length(xf) # xff <- factor(x,levels=c(5,12,13,88)) xff <- factor(x,c(5,12,13,88)) # xff # xff[2] <- 88 # xff xff[2] <- 28 ages <- c(25,26,55,37,21,42) affils <- c("R","D","D","R","U","D") tapply(ages,affils,mean) d <- dat...
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#' @title Perform PubMed queries on 2x2 combinations of term vectors. #' @description Perform PubMed queries on the intersections of two character vectors. This function is a wrapper to RISmed::EUtilsSummary with type = 'esearch', db = 'pubmed'. #' @param rowTerms Character vector of terms that should make up the rows ...
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# ------------ # Introduction # ------------ ## This file trains logistic model with payment&session data for several register months. NAME <- '06_logit_v3_mkt_check' # ------------ # Preamble # ------------ ## Imports source('1_code/00_utils.R') # packageTest('DBI') # packageTest('odbc') packageTest('data.table') i...
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library(SCRT) ### Name: graph1 ### Title: Graphical representation of single-case data ### Aliases: graph1 ### Keywords: Single-case design Graph ### ** Examples data(ABAB) graph1(design = "ABAB", data = ABAB)
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Backend of MyStory: Methods: * server.py: server code that implement python server middleware that connects UI with tensorflow server and database * server_call_tensorflow.py: part of code that calls tensorflow server which generates captions given images - image_processing.py: pre-process the images. ex. re...
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# Plots histogram of exponential next to histogram of observed limit order interarrival times # Simulate from exponential distribution with parameter the inverse of mean limit order interarrival time # (number of simulations) = (number of limit orders) simulated_exponential <- rexp(length(limit_interarrival_times...
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# ----------------------------------------- # # MESA Batch 1 Create First Step # # of Haplotype Tracking Pipeline Sample # # Summary # # 21AUG2018 # # K. Sumner # # ----------------------------------------- ...
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## Starter Project on Loading our own dataset library(readxl) data <- read_excel("C:\\Users\\Ajay Sen Riti\\Desktop\\Files and Shortcuts\\DataSet\\tamil_nadu_covid19.xls") head(data) tail(data) str(data) names(data) data$day_tested head(data$day_confirmed)
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#library(testthat) test_that("to_subdir_matrix() works", { f <- kwb.file:::to_subdir_matrix expect_error(f()) paths <- c("a", "a/b", "a/b/c") expect_identical(dim(f(paths)), c(3L, 3L)) expect_identical(f(paths, method = 1), f(paths, method = 2)) expect_length(f(paths, result_type = "list"), 3L) }...
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########################################################################### # In this file, two R functions, makeCacheMatrix and cacheSolve are defined. # The former creates matrix data structure and the latter calculates # its inverse matrix. # As the inverse calculation is time-consuming, once the inverse is calculat...
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#################### ## This is the main call function that performs the simulation for the paper ## ## simEmpiricalSize() performs the simulations for the ARMA(1,1)+GARCH(1,1) simulations ## in the paper. If we specify alternative != 0, it is technically computing power ## ## ## The second function is the call functio...
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# Course : Data Mining # First Name : Yilin # Last Name : Lou # Id : 10445676 # Project : Midterm O5 ## remove all objects rm(list=ls()) #load a file data<-read.csv("COVID19_v3.csv",header = TRUE,na.strings = "?",colClasses = c("MaritalStatus"="factor")) # Remove the miss...
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rankhospital <- function(state, outcome, rank) { data<-read.csv("outcome-of-care-measures.csv") datastate <- subset(data,subset = State == state) if(outcome== "heart attack"){ outcome = "Heart.Attack" } else if(outcome == "heart failure") { outcome = "Heart.Failure" } else if(outcome == "pneumonia") {...
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######################################## Generation of space-time dataset ####################################### ########################################### For Testing MSSA-MEOT and S-T mode PCA ##################################### #This script performs analyses and produces figures for synthetic space t...
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## The functions makeCacheMatrix() and cacheSolve() implement a caching scheme for the ## inverse of a matrix. ## ## Example usage: ## ## > m <- makeCacheMatrix(matrix(c(1, 2, 3, 4), nrow=2, ncol=2)) ## ## > m$get() ## [,1] [,2] ## [1,] 1 3 ## [2,] 2 4 ## ## Get the inverse for the first time: ## ## > cache...
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/AllClasses.R \docType{class} \name{SpatialExperiment} \alias{SpatialExperiment} \alias{SpatialExperiment-class} \title{The SpatialExperiment class} \description{ The SpatialExperiment class } \section{Fields}{ \describe{ \item{\code{images}}...
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plot2<-function (){ #import the data from the txt file x<-read.table("household_power_consumption.txt",header=TRUE,sep=";") #Convert classes of date x[,1]<-as.Date(x[,1],"%d/%m/%Y") #Extract only 2 days data y<-x[(x$Date=="2007-02-01"|x$Date=="2007-02-02"),] dt<-strptime(p...
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/DIscBIO-generic-plotKmeansLabelstSNE.R \name{plotKmeansLabelstSNE} \alias{plotKmeansLabelstSNE} \alias{plotKmeansLabelstSNE,DISCBIO-method} \title{tSNE map for K-means clustering with labels} \usage{ plotKmeansLabelstSNE(object) \S4method{pl...
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# Constructor ------------------------------------------------------------- #' Dendrogram guide #' #' Visual representation of a discrete variable with hierarchical relationships #' between members, like those detailed in #' \code{\link[=scale_x_dendrogram]{scale_(x|y)_dendrogram)}}. #' #' @inheritParams guide_axis_tr...
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#!/usr/bin/env Rscript args = commandArgs(trailingOnly=TRUE) mosq.data <- read.csv(args[1]) inputData <- mosq.data library(randomForest) print("Loading 'randomForest'") library(party) print("Loading 'party'") print("Importance Value Selection") rffile1 <- paste(args[1],".rflog.Rdata",sep="") print(rffile1) #cf1 <- ra...
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############################################### # Model Regresji Liniowej # ############################################### #zaczytanie danych (tutaj skorzystam z wbudowanego zestawu "hills") install.packages("MASS") library("MASS") hills = hills attach(hills) #konstruujemy prosty model regresji l...
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/Functions_Cost_Complexity_Pruning.R \name{cost_error} \alias{cost_error} \title{cost_error} \usage{ cost_error(node, tree, alpha) } \arguments{ \item{node}{the number of the node in the tree \code{tree}} \item{tree}{a tree. A data frame retu...
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#' Proportional Variability index (PV) #' #' Calculate PV of the variable Z #' #' @param Z a numeric vector #' #' @return a numeric value #' @export #' #' @examples #' \donttest{ #' Z = c(2,3,4,5) #' PV(Z) #' } PV <- function (Z){ n = length(Z) pairs = combn(Z,2) min_z = apply(pairs,2, min) max_z = appl...
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# this is how to download and unzip the zip file # uncomment the following lines if needed #zipURL <- "https://d396qusza40orc.cloudfront.net/exdata%2Fdata%2Fhousehold_power_consumption.zip" #zipFile <- "exdata.zip" #download.file(zipURL, destfile= "exdata.zip") #unzip(zipFile) #create Data Frame from unzipped text fil...
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mod_ashape3d = function (x, alpha, pert = FALSE, eps = 1e-09) { flag <- 1 flag2 <- 0 alphaux <- alpha if (any(alphaux < 0)) { stop("Parameter alpha must be greater or equal to zero", call. = TRUE) } if (inherits(x, "ashape3d")) { inh <- 1 tc.def <- x$tetra tri.def <- x$triang ...
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#' Shiny module UI function for form completeness monitoring #' #' This function represents a shiny dashboard UI module that allows users to #' view a form completeness table. #' #' @param id string containing a namespace identifier #' @param label string to be used as sidebar tab label #' @return shiny.tag list object...
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/body_add_flextable.R \name{headers_flextable_at_bkm} \alias{headers_flextable_at_bkm} \title{Add flextable at a bookmark location in document's header} \usage{ headers_flextable_at_bkm(x, bookmark, value) } \arguments{ \item{x}{an rdocx objec...
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# WITH TIME SERIES OBJECT & CORRELATE ANALYSIS cadairydata <- maml.mapInputPort(1) # Create a new column as a POSIXct object Sys.setenv(TZ = "PST8PDT") cadairydata$Time <- as.POSIXct(strptime(paste(as.character(cadairydata$Year), "-", as.character(cadairydata$Month.Number), "-01 00:00:00", sep = ""), "%Y-%m-%d %H:%M:...
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library(ggplot2) library(caret) library(dplyr) library(DMwR) library(e1071) library(factoextra) library(pROC) library(kableExtra) ##### Read the pre-processed file ##### new_df= read.csv("data/Imputed_data.csv",header=TRUE) # Subscribed vs Not Subscribed barplot(table(new_df$y)) dim(new_df) str(new_df) # Remove firs...
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\name{gibbscap1} \alias{gibbscap1} %- Also NEED an '\alias' for EACH other topic documented here. \title{ Gibbs sampler for the two-stage open population capture-recapture model%% ~~function to do ... ~~ } \description{ This function implements a regular Gibbs sampler associated with Chapter 5 for a two-stage capture ...
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#ライブラリ読み込み library(ggplot2) library(tibble) library(readr) library(readxl) library(R.utils) library(fitdistrplus) library(ismev) library(FAdist) #actuar,evd, EnvStarsより先に読み込ませる library(extraDistr) library(evd) #evdはactuarより先に読み込ませて、evd::dgumbelなどをマスクする library(actuar) library(EnvStats) library(mixtools) library(RcppFad...
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% Generated by roxygen2: do not edit by hand % Please edit documentation in R/sqs_operations.R \name{sqs_untag_queue} \alias{sqs_untag_queue} \title{Remove cost allocation tags from the specified Amazon SQS queue} \usage{ sqs_untag_queue(QueueUrl, TagKeys) } \arguments{ \item{QueueUrl}{[required] The URL of the queue.}...
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#' @include mortalityTable.R NULL #' Class mortalityTable.period - Period life tables #' #' A period life table, giving death probabilities for each age, up to #' maximum age \code{omega}. The \code{baseYear} slot can be used to hold #' information about the period. #' #' @slot ages The ages corresponding to the...
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##### This script is to test different parameter settings for the third paper to determine how they affect the outcome of the type I error ##### library(seamlessTrials) #Running multiple simulations: save.boundary = save.boundary.values() n.trt = 3 nsim = 1000 n1 = 20 N1 = 100 N=200 sigma0 = 1 sigma = 1 ...