zongyanliu commited on
Commit
df74284
·
1 Parent(s): a373783

Add GeneCAD multi-species training data (5 species)

Browse files
.gitattributes CHANGED
@@ -69,3 +69,8 @@ data/fasta/Juglans_regia.Walnut_2.0.dna.toplevel_chr1.fa filter=lfs diff=lfs mer
69
  data/fasta/Phaseolus_vulgaris-2.0.2_chr1.fasta filter=lfs diff=lfs merge=lfs -text
70
  data/fasta/Sviridis_726_v4.0.fa filter=lfs diff=lfs merge=lfs -text
71
  data/fasta/GCA_978657495.1_TAIR12_genomic_5.fna filter=lfs diff=lfs merge=lfs -text
 
 
 
 
 
 
69
  data/fasta/Phaseolus_vulgaris-2.0.2_chr1.fasta filter=lfs diff=lfs merge=lfs -text
70
  data/fasta/Sviridis_726_v4.0.fa filter=lfs diff=lfs merge=lfs -text
71
  data/fasta/GCA_978657495.1_TAIR12_genomic_5.fna filter=lfs diff=lfs merge=lfs -text
72
+ *.fa.gz filter=lfs diff=lfs merge=lfs -text
73
+ *.fna filter=lfs diff=lfs merge=lfs -text
74
+ *.fna.gz filter=lfs diff=lfs merge=lfs -text
75
+ *.gff3 filter=lfs diff=lfs merge=lfs -text
76
+ *.fa filter=lfs diff=lfs merge=lfs -text
data/fasta/training/Athaliana_447_TAIR10.fa ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3da327222640709882fb2d4faaed120fbbe7394aa35090a2f8149cb4e230cd0c
3
+ size 121183067
data/fasta/training/Gmax_880_v6.0.fa ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fdc8c5db423929d9a959505284c21d82e9834ee90679636a786c26d13525ee2b
3
+ size 1023768017
data/fasta/training/Hvulgare_462_r1.fa.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1a9f07cebb9740b0b1734807dd2f7da252292ce64c1de7e9ad735ac677f66d80
3
+ size 1399718743
data/fasta/training/Osativa_323_v7.0.fa ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:db8b7efb4df6ae33195143f3444b8816917441e1b964d150663ceeb2249506c4
3
+ size 381956675
data/fasta/training/Ptrichocarpa_533_v4.0.fa.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0cafbefdbbcfe8db9486c699ecedfefab7f39dca9a7e19f007a950e279d18a4e
3
+ size 116064582
data/gff/Coffea_arabica_geisha.annotation_chr1.gff3 CHANGED
The diff for this file is too large to render. See raw diff
 
data/gff/Juglans_regia.Walnut_2.0.60_chr1.gff3 CHANGED
The diff for this file is too large to render. See raw diff
 
data/gff/training/Athaliana_top_transcript.gff3 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:466957cb0720eedceca3783686eec0d142975669cbffe8b5ad43507174db4195
3
+ size 52743675
data/gff/training/Gmax_top_transcript.gff3 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:53bf2c165fc9a4efd4b9d8f1b9618fec928f190e0bfeac8192f29c2ddb609042
3
+ size 104985390
data/gff/training/Hvulgare_top_transcript.gff3 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a36d43e6aab7f453c87bb6b4a5138ab4f3cfa96dc627bd9a9506fd47fa849845
3
+ size 60586679
data/gff/training/Osativa_top_transcript.gff3 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:065297984279d5bc89105b108612837d98a22c96ff006f0f30d3bc0ca7612810
3
+ size 39201573
data/gff/training/Ptrichocarpa_top_transcript.gff3 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:80f052a23c550adcb9ce94349a311f7339bdfc2530e9a17179af2ba2e2aa3e29
3
+ size 68287598