rnacentral_id
stringlengths
18
21
taxid
int32
9.61k
1.04M
description
stringlengths
12
314
rna_type
stringclasses
28 values
so_rna_type
stringclasses
80 values
databases
stringclasses
686 values
secondary_structure
stringlengths
0
9.99k
sequence
stringlengths
10
348k
URS0000023801_9606
9,606
Homo sapiens (human) piR-36079
piRNA
SO:0001035
ENA,GeneCards,PirBase
GGCTCTGGTATGATGTGACGTACTTTCCTGCA
URS0000023834_9606
9,606
Homo sapiens (human) piR-33721
piRNA
SO:0001035
ENA,GeneCards,PirBase
CTCCCGTGTGGATTCTTTGATGCTGAA
URS000002388A_9606
9,606
Homo sapiens (human) piR-58824
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGTGCCCTTGAACCCTGCAGAGAGACCTGCTC
URS0000023931_9606
9,606
Homo sapiens (human) non-protein coding lnc-MTHFD1-1:2
lncRNA
SO:0001877
GeneCards,LNCipedia
ACACACACACACACACACACACACACACACACATATGGCATTGAGTTCTAGTCATATCCTAAAGAAAAACTATGGTGCGCTATGTTATTTATAGTACTATACTCTGTGTGAGTGACTCTGTGTGTATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGTCTGTCCGAATTTGCCCTTCAAATACTAAATAAATTCATCTCTCACCTCAAA
URS0000023A5F_9606
9,606
Homo sapiens (human) piR-32020
piRNA
SO:0001035
ENA,GeneCards,PirBase
CAAGAAGCAAACGGGAGCCTTTCTGAA
URS0000023AB5_9606
9,606
Homo sapiens (human) piR-35777
piRNA
SO:0001035
ENA,GeneCards,PirBase
GGAAGTGACAGGAGCTCAGCATCCCTGTT
URS0000023B02_9606
9,606
Homo sapiens (human) novel transcript
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE
GCGTGGCCCCGGGAGGCGGCGGACGCGGGGACATCTTCTCAGCGCGCGGATTCTCTCCACGGTCCGGCCTCCCCGTCCCCGCCCCGCCCTCGCGCCAGCCACCTCCGGCCGCCGGCTCAGATCTCTGGAAGGGACTCAACAAAGCTTTCCTAAATTAATTGGCTCTGACGGTACCTTCTTAAGGATTTCTGGTGTGGCTCTGACATATAAGCAACTCAGATAACTACAGAAAACTGTGTGTAAAAATCAGCCCACCAGTATTTGAAACAAGTATGCACTGTTCTTT
URS0000023C39_9606
9,606
Homo sapiens (human) piR-56187
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGGGCCATGCTTGTGAAGTGATGTGTGTC
URS0000023D29_9606
9,606
Homo sapiens (human) novel transcript
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE
AATGTGTGCCCATGGGTGTGTGCAGGTGCACTCAGGGCACTGTGTTGTGGTCTGCTGCCTGGAGGCAGACCAGGGCTTGTGCGTGGCTTTTGGCTAGAGTTACTCACAGGTGACCCACGGAGTCAGTGCAGGGGCTATGAGAATTTGCATTTGCATCAAAACGATGCAGAATCAAGACTGAAAGAAGTTAAGTAACTTCACTCTAGATCATCTGGTAGAGGGTATAAAGGAGATCTAGCCCTGGGAAGTTAGGCTCTAAAACCTGTGCCGTTCCTATGAAAGCACATTTCCTTCATAAAAGGCAGGAGTGCTCCCAGGCA...
URS0000023DCB_9606
9,606
Homo sapiens (human) novel transcript
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE
TGTTCACCGTTCCTTTGAGTTCCTCGTAGATTCTGGATATTAGTCCTTTGTTGGAGGTATAGATTGTGAAGATTTTCTCCAATTCATCGCCGTTTTTTAGAGTTTTTCTCACTAAATATTGACTAACGGAACCTAGCCCTGTAATGTTGATAGTCGGGCGGGTCGGAAGTGGCTGAGGTGGAGTATCTGCAGGAGAAGAACTGAGGCTCCTAAGTGCAGCATCTTGTCCAAGAGGTTTCGTCCCAATGCGTGGGGAACATCCGGATTGTGATGTTTAGCTCTCAGTTTCTAACTTGGGCATTCTAGCAACTGTATTTCTC...
URS0000023DD9_9606
9,606
Homo sapiens (human) piR-45810
piRNA
SO:0001035
ENA,GeneCards,PirBase
TCTGAAGGTGCTGTTTATGAAACTACATT
URS0000023E27_9606
9,606
Homo sapiens (human) piR-46099
piRNA
SO:0001035
ENA,GeneCards,PirBase
TCTGCTTGTAGCTGCTGCTCCACCTCGGA
URS0000023E2B_9606
9,606
Homo sapiens (human) 16S ribosomal RNA
rRNA
SO:0000651
ENA
((.....(..((((........(....).(...).................(......)........((.....((.....))....)).......)).)).............((....))....)..................))...........(((.......)))..((((........))))((((((.......(.((((((..((....))...)))))))..((((...((((((...((((((((((((.(((.....)))...((((.((((........))))))))..).))))))))))).((.....
GCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAACCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAAACCTGGCGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAGAGCCAAAGCTAAGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCG...
URS0000023E8F_9606
9,606
Homo sapiens (human) ZNF571 antisense RNA 1
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook
GGGGGACTGGCCCCAGCGGCTTGGCCCCCAGGCGTCTGTGGCAGTGCGTCCCCTCTCCGCGGGATCGTCGCCATGGTCCTGCGATCCTAGGAGTCGGGCAAGGCCGAACCTGCCTGAAGAAACCTCAAGCGGAGATTCAAGGAAGCACCACGTGATCCCTAAGGATCCCAAAGATGCGTCGGGCATGCATGGGCGGTGTGAGGGTGCGTCTCCCTGACAGGTGTCCCCGCTGGGATTTCGAGGAATTATCCGATGAAAAGTAGAAGAGGTTGAATGACTTTCAGTGGCCTTTTCTTCACAGATTATTCAGTAAGAACAGT...
URS0000023ED8_9606
9,606
Homo sapiens (human) long intergenic non-protein coding RNA 3003 (ENSG00000225188.1, ENSG00000230089.1, ENSG00000233950.1, ENSG00000235273.1)
lncRNA
SO:0001877
Ensembl,Expression Atlas,GeneCards,LNCipedia,NONCODE
AAGCTGAGTGAGGCCATGTCTGTTACCAGGAGACATGAGACTCACAGCAGATCTCTCTGGCTTAACATGGGAGATGGCGGCATTGACCAACATCTGTGGGACTATATTTGTGGTGTAACAAAGATCCAAGATAGCCAGATTTCTAAGAAAGAAATATATGGGGGTTTGGAGATGTTTATCCAGTAATGGCAGCAGGATAAGGACCATATTTCCCATCAAAGAAATTGCATAGAAGAAAAAGACAACCCCAGAGATGATCATCTCCAGCTGAGGCTTCCCAGGGAACCCAAGGAGCATAAGCCAACCAAAATGTTGGAATT...
URS0000024046_9606
9,606
Homo sapiens (human) piR-40233
piRNA
SO:0001035
ENA,GeneCards,PirBase
TATCATAGCATGTGTCACGCTACCTGATA
URS000002407D_9606
9,606
Homo sapiens (human) novel transcript
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE
ACCTAGCCCCGCCCCCAGCCCCGCCGCGGGGCGCAGCGCGCCTCCCCGGGCTCCCGGCTCGGCTGCCTCCCTTTCCCTCAGCCTCCCGGGAGCGTGACGCGGCGGCCCGGGGGCCTCCGGGCGCCTTCCGGGGCACGCGGGATCGACATGCACTTGGATCATTGCAGTTTCTGGGCCTGCTGTCATCTCCCCCTTCAGTACTTCCCACATATGACTACCAACTGTTAGACGATGTGCTGCTGCCAGACCAGCCTTTCATTTCTTGGACATCCGGCTATTTACCCAGGAAAAGTCATCCTTTGACTATTTTTCATGACCTT...
URS00000240F1_9606
9,606
Homo sapiens (human) piR-56951
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGGTAGGAATGGATGATGATGCTGCAGAGG
URS0000024106_9606
9,606
Homo sapiens (human) PES1 antisense RNA 1 (PES1-AS1)
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,HGNC,LncBook,LNCipedia,NONCODE
GCCGTCTTTAAGAACTGTAACACTCACCTTGAAGGTTGGCAGCTTCATTCTTGAAGCTGGAGTGCAGTGGCCCAATCTCAGCTCACTACAATCTCTGCTTCCCAGGTTCAAGTGATTCTCGTGCCTCAGCCTCCCGAATAGCTGGGATTACAGGAGGCTCCCAGCCCTTTCGGATTGGTTGAGAAAAGTGGCCTGGCTGGTCTGGGGCCAGCGGCACCCACCCTCCCCTCAATTGCCCAACTCCCCCCC
URS0000024153_9606
9,606
Homo sapiens (human) non-protein coding lnc-OR4N4-1:12
lncRNA
SO:0001877
GeneCards,LNCipedia,NONCODE
AGTAACACTCTGGGAGGGCTCAAACCACATAACCAAATGTGCCAAGATAATCCTGAGCTCACTATTGTCAGTCCTGAAGATTTTCCTCAGATAATCTTTCATCTCTTTGTTCCTGAGACTATATATTAGAGGATTACAGAGTGGTGTTATCACAGAAAAGAACAAGTGGATTTTTATCTGAGATCTACAACTTATGAAGAATACAAATGATGTATATTCTTTTCTACTCTTCATGTATGGACTAGAGGGGCTTGCACAGTAGTAAGAAAAAAATGGCTGAGACCCACAGGAACAAAGAAACAGGACAGGAGTTAGATGCA...
URS000002418B_9606
9,606
Homo sapiens (human) piR-33461
piRNA
SO:0001035
ENA,GeneCards,PirBase
CGGCATTGTGTAGTCCATGGTATCCACAA
URS00000241EB_9606
9,606
Homo sapiens (human) piR-37701
piRNA
SO:0001035
ENA,GeneCards,PirBase
TAATGTCAACGTCCCTAGCACGAAGC
URS00000241FF_9606
9,606
Homo sapiens (human) piR-46747
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGAAAGGGTGATACACAAAGGCATGCC
URS00000242DF_9606
9,606
Homo sapiens (human) piR-60298
piRNA
SO:0001035
ENA,GeneCards,PirBase
TTCAGGCAGATCGGAAACCACTGGCTGCAGC
URS0000024332_9606
9,606
Homo sapiens (human) 12S ribosomal RNA
ncRNA
SO:0002344
ENA
.....................((((((.(((.((((((((....(((.(((..........................(((....(((.....)))....)))....(((....(((..(((....))).)))......)))...............((....)).....)))))).........(((...(((((....))))).)))..)).)))))).....((((((((..............................)))))))).))).))))))....(((.......((((...(((..................
AATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGAGTTCACCCTCTAAATCACCACGATCAAAAGGGACAAGCATCAAGCACGCAGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACCCAAGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCACCCCCTCCCCAA...
URS0000024352_9606
9,606
Homo sapiens (human) non-protein coding CTBP1-DT:27
lncRNA
SO:0001904
ENA,GeneCards,LncBook,LNCipedia
GAAACCACGGCATGGAGACGGAATGATGCAGACTCCTATCCGCGAGATACCTGCTGTAATTTCGCTGTGGTTCGTGAGGACGCGTCCTGGGCTGCCCTGAGAAGCCTACGTCTCCCCTTCGAGGCCCGGGAAGACCTCCAACCCCGCTGACAATGCTGGGCCCTCAGCCAGACCTGCCCTGCGTGCCACGTTCTGTTCTAAGATCGGGCTGCCGAGCTGTGGCCTGGAGGAAACCTGGCAGGTGGGGCTGCCATGAGCAGCAAGCTCAGTCCAGAAGAACAGTTCCTCTCCAGGATCCACTTCCTGCGCACTTTTATGTG...
URS0000024383_9606
9,606
Homo sapiens (human) piR-59165
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGTGTGCTGTGAGGGCTTTAAGAGCTTTGA
URS00000243D6_9606
9,606
Homo sapiens (human) partial ncRNA
snRNA
SO:0000274
ENA
AGAGAATCGCTTGAACCCAGGAGATGGAGGTTGCAGTGAGCCAAGATCGCGCCACTGCACTGCAACCTGGGCGACAGAC
URS00000243E4_9606
9,606
Homo sapiens (human) microRNA hsa-RG-9
miRNA
SO:0000276
ENA
GAGTGCCTTCTTTTGGAGCGT
URS0000024406_9606
9,606
Homo sapiens (human) piR-51837
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGCCCGCTGAAGGCACTGAGGTGTGCATCTGT
URS0000024462_9606
9,606
Homo sapiens (human) novel transcript
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE
AGAATGGGCAGAACTCACTCTGGAAGAGCTGGTGGGAATAATGCCATTTGGGAAGCACACAACATAGGCAGCACAGTGGAGCACAAGAAAGTCCGGAGCTGTTAGCTCCCAGGTCCTGAAGGAATGAGAACTTTCACCGGAGTCTGGATTCCACTGTAGACAAAATCCTCTCTGCATCGCCAAATGACTCTTATTTTCCTAAACTTACTCTAAGAATATCTTTTAACAGCAATTTGAATAAACCGACTCACATGCCACTGTGA
URS00000244F0_9606
9,606
Homo sapiens (human) novel transcript
lncRNA
SO:0001877
Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LNCipedia,NONCODE
TGAAGATATGTGTCATATTTCTTTCAATGGATAATTTTAAGTGATATTAAATTATGTCAATAGTTTGAATAGCAATAGCAACCATTGAGCTAAAATTATGCAACAAATAGTTGCTTGTTAACCTAAGATATTTCAACATTTTTGAAAGATTAGTAATAAAACATGCCATATTTAAAAAGCCTTAATGTGAATCTTCTCTCCACTGTAGTTCAGGGGACACTCAGGATGCTAGAGTAATGCTATAAAAAAAGCCACTCAGACAGGTGCAGTGGCTCACACATGTAATCCCACCTACTCAGAAGACTGAGGCCGGAGGATCA...
URS000002465A_9606
9,606
Homo sapiens (human) piR-47561
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGACAGAGAGCTCTGGATAGCGGTGCTTGT
URS00000246C9_9606
9,606
Homo sapiens (human) SNCAIP antisense RNA 1 (SNCAIP-AS1)
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,HGNC,LncBook,LNCipedia,NONCODE
CTCTCGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACACAGAAGACGGGTGATTTCTGCATTTCCATCTGAGATGAGGAAATAGAAGTCCAGAGAGTAAAGCAGATTGCTCAAAGCTAATAATGATGACAGGAATCAAAGCCAGAGACAGTAATAAATATGGTTGTTTACACCTCTGTACCTCATAAAGACCTCCAAGCATTCTGTACACCAGCTCAAGATGACTTGCTTGAAATGGAAAAAGGCTGTTTTCAGCAGTAGTTAGCCCCTATACTGGCAGTGTTTCACAGAAAA...
URS0000024783_9606
9,606
Homo sapiens (human) piR-58854
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGTGCTATGACACCACTGCCTTCCAACC
URS00000247CF_9606
9,606
Homo sapiens (human) piR-43555
piRNA
SO:0001035
ENA,GeneCards,PirBase
TCCCCTCAACCGGCAGAAGCTAGACAGC
URS00000247E1_9606
9,606
Homo sapiens (human) piR-54681
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGGCACTCATCCCTGGCCTGTGTCTAC
URS000002482D_9606
9,606
Homo sapiens (human) piR-50321
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGCAACTGCTACCAACCCCTCTTCCAGGAA
URS0000024874_9606
9,606
Homo sapiens (human) long intergenic non-protein coding RNA 1865
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE
GGACGAACATCAGAGCCCGCAGCTCTCGGCCCTGCTGGTGGCAGAGGCTTTGTACTGTGTGACAATGACCTGGATATGGAAGCAGAAGGGAGCTTCTAAGGACCGGAAGCTGAGAGTCTGTCTCCTGTCCCGGCCCGGACACTGGGGTTCAGGAACCAGAGCCTCAGTGTCTGCAGGAGTTGCTGGCTGTTTCCTGATGCAGTTGGAGCAGAATGGGATGTCCTGGGACAACAGAGATGTTTACCCATCTTGACTAGTGTGGTCATCTGAAGAATGGCCTCCAAAGACATCCTGAGAACCTGGGAATGTTGCATGGATGA...
URS000002489A_9606
9,606
Homo sapiens (human) piR-42567
piRNA
SO:0001035
ENA,GeneCards,PirBase
TCCACTGTCCAAGAAGGTTCGAGGCCTCAT
URS000002491F_9606
9,606
Homo sapiens (human) tRNA-Trp
tRNA
SO:0000253
ENA
(((((((..((((.......)))).(((((.......)))))....((((......))))))))))).
AGAAATTTAGGTTAAATACAGACCAAGAGCCTTCAAAGCCCTCAGTAAGTTGCAACACTTAATTTCTG
URS000002493D_9606
9,606
Homo sapiens (human) piR-60836
piRNA
SO:0001035
ENA,GeneCards,PirBase
TTCTGCTGCAGGGAAGCCTGGTCCCGCCTA
URS0000024954_9606
9,606
Homo sapiens (human) piR-58670
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGTGATGATCCCACATGGGTGCAGTGA
URS0000024989_9606
9,606
Homo sapiens (human) piR-34531
piRNA
SO:0001035
ENA,GeneCards,PirBase
GAGAAAGCTCACAAGAACTGCTAACTCAC
URS00000249FF_9606
9,606
Homo sapiens (human) long intergenic non-protein coding RNA 3137 (LINC03137)
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,HGNC,LncBook,LNCipedia,NONCODE
AACAGGATGCTGAACAGCGGAACACAGCGGACTTGAGCCAGCCTAAGTGGGTTTCTGCTCCTTGCAACAAGAGGCCTGAATAGAAGCCCCTTCTTCAGGGGAGTGGGCATCAGCTCAGAAAGAGGATCCCATGGGAACTGACTTTGCTGGTGACCAAGGCCCTACCACCAGGGCACCCTGCCCATGTATCCCAAGCAGAGGGAGCAGAACCAGCGGTGTAACTACTGTGCTTGACACCCAGGGCAGGTCTTTTTTTAACTCACCGATCTTCCATGCAACAAAATTGTTTTCTGTGAAAAGCAGGAAATGAATAACAACAG...
URS0000024A67_9606
9,606
Homo sapiens (human) piR-39873
piRNA
SO:0001035
ENA,GeneCards,PirBase
TAGGTGTCCTCAGCACAGTTCCCTGGTCA
URS0000024ABE_9606
9,606
Homo sapiens (human) 12S ribosomal RNA
ncRNA
SO:0002344
ENA
.....................((((((.(((.((((((((....(((.(((..........................(((....(((.....)))....)))....(((....(((..(((....))).)))......)))...............((....)).....)))))).........(((...(((((....))))).)))..)).)))))).....((((((((..............................)))))))).))).))))))....(((.......((((...(((..................
AATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGAGTTCACCCTCTAAATCACCACGATCAAAAGGGACAAGCATCAAGCACGCAGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAGACAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACCCAAGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCACCCCCTCCCCAA...
URS0000024ACC_9606
9,606
Homo sapiens (human) hsa-miR-518a-3p
miRNA
SO:0000276
ENA,GeneCards,LncBase,MalaCards,miRBase,RefSeq,TarBase
GAAAGCGCTTCCCTTTGCTGGA
URS0000024B6D_9606
9,606
Homo sapiens (human) piR-61806
piRNA
SO:0001035
ENA,GeneCards,PirBase
TTGTTATAGTGCCATGGGTAACCCAT
URS0000024C1B_9606
9,606
Homo sapiens (human) non-protein coding LINC02136:4
lncRNA
SO:0001877
GeneCards,LNCipedia,NONCODE
GTAAGAAAATGCCTGCAGCCCCTTGCACTCGCGGAGTCATCTACGCAAGGTCGGGCTCTGCAGGCAGCAGCTTCTGGTCTCACCCCGGGCTTGTGCGCACACCTGGGGACATGTGGGAAGGTCGCTCTTGCGGCCACTGAGCGGCCTGGCCTCAGGGAACGAGCCCCGCGCCGGGAAGAAAGCTGCCTGCCGGGAGCGCAGCCTATTGGGGACCCGGGACCCGAGCCACCGCGGCTCACCAAGAGGCGGTGGGGCCCTGCGGTGCGTGTGGGACGCCGGGCAGGCAGACTCTGAGCACGGCCAGGAGGCAAGAAGAGATT...
URS0000024CFC_9606
9,606
Homo sapiens (human) novel transcript
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE
CACCATATAAGAAGTGCCTTTCACCTTCCACCATGATTCTGAGGCCTCCCCATCCATGTGGAACTAAATGGAATCTTTCTCTGTTGCCCAGGCCAGAGTGCATTGGCACCATCACAGCAAAGTGCAGCCTCAACCTCCTGGGCTTGGCTAAAGCAATCCTCCCACTTCAACCTCCTGAGTAGCTGGGACTGCAGGAATGGGGACAAAGCTATTGAAAACTTCTCCTTCTCAGGCTCACTTCGCCAACATCTGTGGCTGAATGTAGACATTCCCCCTTTTAGGCAAATTTCTTTAAATTCATAGCAAGGTATGACCAAGAA...
URS0000024CFF_9606
9,606
Homo sapiens (human) novel transcript
lncRNA
SO:0001904
Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE
TTCCAACGCCCACTTGGATTCAAGGAGATTCAAAACCCGTGTCACTGCTGCCATCTTCCTAGAATCCCTTTAAATCCTCATGGATTTGCTGACATTGGGAGCATCCTGAAAGAGTCCCCATGCTAGGGTGGCTGCAGTAACAGGTTCTCCCCACTCCAGAAAAAATCAAATCAGATTGTGAATTTATTCCCTGACATTAACACACGGCATTACAGGAGCATGTACATCACATGGTCAATTTATTGGCATGAGGATTATGTCATCGGGGAATAAATGGGAAATTCTCAAGGTA
URS0000024D93_9606
9,606
Homo sapiens (human) signal recognition particle RNA
SRP_RNA
SO:0000590
ENA,SRPDB
(((((((((((....))))))))....(((..........)))))).((((((((((.((((((((((((((((....(((((((((((((.(((((((...((((((((((.(((((((((((((((((((((((((((((((((....))))))))))))))))))((...))(((((((...(((((....(((....)))....))))).))))))))))))))))).)))))))...)))))))))))))))))))))))))))))))))))))..)))))))))))))))))....
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGACCACCAGGTTGCCTAAGGAGGGGTGGACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTGATCAGTAGTGGGATCGCGCCTGTGAATAGCCACTGCACTCCAGCCTGGGCAACATAGCGAGACCCCGTCTCTTTT
URS0000024E45_9606
9,606
Homo sapiens (human) piR-56897
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGGTACTGCTCACATGCTGCATTCAGGC
URS0000024F49_9606
9,606
Homo sapiens (human) piR-60141
piRNA
SO:0001035
ENA,GeneCards,PirBase
TTCAAGACCTCCTGCCAGGCCTGGCATC
URS0000024FD4_9606
9,606
Homo sapiens (human) MIR7515 host gene
lncRNA
SO:0001904
Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,MalaCards,NONCODE
TTATCACAAGCAGATGGAATCCCTATAGAGTCGGATCTCATCTACATATCACCTATTATATGTAGTTATTGATGGATAAATACTTCAACAACTAAAGGCAGAAAGAGAGCAGTTCACAAAGACGTTATTGGTGATTCAATCTTGAGTCATGAAAAGTCAACCTTGAGCCACAAAAAGTCAACCTTGAGCCAAGCAGATTGGAGAGTCATACATGCCATTCCTGGGACCATCAAAAATGGCAGAGGTCACACAAAAAGGCAAAACTTTTAAGAGGTGTTTTAAACGTCGTATGGGCCAAAGAGAAGCTGGATTTCCTATTG...
URS0000024FD8_9606
9,606
Homo sapiens (human) 16S ribosomal RNA
rRNA
SO:0000651
ENA
((.....(..((((........(....).(...).................(......)........((.....((.....))....)).......)).)).............((....))....)..................))...........(((.......)))..((((........))))((((((.......(.((((((..((....))...)))))))..((((...((((((...((((((((((((.(((.....)))...((((.((((........))))))))..).))))))))))).((.....
GCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAAACCTGGCGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAGAGCCAAAGCTAAGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCGCACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCG...
URS0000025027_9606
9,606
Homo sapiens (human) piR-43429
piRNA
SO:0001035
ENA,GeneCards,PirBase
TCCCATGGTCGTCATGAAGAATGTGCTT
URS00000250B1_9606
9,606
Homo sapiens (human) piR-58503
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGTGACATGTGGTCAGGCGTTGTTGTGG
URS0000025100_9606
9,606
Homo sapiens (human) novel transcript, sense intronic to PTPRM
lncRNA
SO:0001904
Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE
TAAAAAAATACTTCTACCTTTATTGGCATTGTGTGTGGAAAAAGTGGTCTATTTAAGGGAAATACAGGCTAGTAAAATATTTGTTATTTGCACTAGGAGATAATTTAAGGAACACCTTCTCAAATGTCATCAGACTTACTTTAAAGGCAAACCAAGTCCAAAAGTTCTAAATTGAGAAAGCTGGAAGGGAAACTTAAATATGATCCAACCCCCTGTTTTATGACCAGAGGGGAATGGATTGGCCAAGATGTCGGGGATGGTTAATAGGACCTCAGGCTCCTGGTCAGTGTGGGGCACTCAGACCCATGAGTCTAGAAAGC...
URS00000251E4_9606
9,606
Homo sapiens (human) piR-50641
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGCACTTCCTGTCTCATCCTTTAGGGACATGC
URS00000251F6_9606
9,606
Homo sapiens (human) non-protein coding lnc-KIAA0930-1:2
lncRNA
SO:0001877
GeneCards,LNCipedia
.(..(..............................................................................................................................................................................................................................................................................................................................
GGGTGACCTCCAGCGAGTCACTGGAGCCTGCAGAATCTCATTTGAGAAGTTGGATAAGATCTCTGCCCCCACCGCCCAGGCCCCAGGGGAGCTGTGCAGACTGACTCTCTTCTGAAGAGTCCCTTGGAAATGTTTTGGCGGTGGCAAGAGAAAGAGCTTTGCTTGTTCTTCAGAAAGACTTGCCGGAGTCAGACACTGAGGACTCCAGAGCATCTGGAGGAAGCCCAAGGGCCACCTCCCCTGAGAAGCCTTCCTTCGCCAGCCTGAATAAAATGGACCTCTATACACACACCTGTCTCAGTGGTGGCAGTGGCAGGCCA...
URS0000025202_9606
9,606
Homo sapiens (human) piR-36142
piRNA
SO:0001035
ENA,GeneCards,PirBase
GGGAAGATGCATCCACCTCCTGCCTCTATC
URS00000252FF_9606
9,606
Homo sapiens (human) piR-43739
piRNA
SO:0001035
ENA,GeneCards,PirBase
TCCCTGCCGACATATCCTTAAAAGACTGGA
URS0000025325_63221
63,221
Homo sapiens neanderthalensis tRNA-Tyr
tRNA
SO:0000253
ENA
(((((((..(((......))).(((((.......)))))....(((((.....)))))))))))).
GGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGGGGTTAAGCCTCTTTTTACCA
URS0000025325_741158
741,158
Homo sapiens subsp. 'Denisova' (Denisova hominin) transfer RNA-Tyr
tRNA
SO:0000253
ENA
(((((((..(((......))).(((((.......)))))....(((((.....)))))))))))).
GGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGGGGTTAAGCCTCTTTTTACCA
URS0000025325_9606
9,606
Homo sapiens (human) tRNA
tRNA
SO:0000253
ENA,Rfam
(((((((..(((......))).(((((.......)))))....(((((.....)))))))))))).
GGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGGGGTTAAGCCTCTTTTTACCA
URS0000025363_9606
9,606
Homo sapiens (human) long intergenic non-protein coding RNA 1356
lncRNA
SO:0001904
Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia
ATTTACAAAATGTTCATGGCAGGGCCCACTTCACAGGGCTGTGAGGATTACAGAGGATAATCTGGGTGAGGCGCATCAGCCCCAGCGCCGCCTGCCACAATTCTATCCGGCCCCACATATGCATCGTCCATAAGCGTCCGGCCCCTGCATTCTCGCTTTTCCACGTGGCCGAGGTGCACACCCCAACCCACTGGGCCAGTCTCCCCGCCCTCTTACCTGCTCTTCTTTCCCGACTCGTCTTTAATACCCACCAGGAGCCAGTCGCCGCGGGCCTGGCTCTGTGGTGGCAAGTTGCATGGGTTCTCCCATCAGGACCTCCC...
URS000002537D_9606
9,606
Homo sapiens (human) tRNA-Glu
tRNA
SO:0000253
ENA
(((((((..((((.....)))).(((((.......)))))....(((((.......)))))))))))).
GTTCTTGTAGTTGAAGTACAACGATGGTTTTTCATATCATTGGTCGTGGCTGTAGTCCGTGCGAGAATA
URS0000025441_9606
9,606
Homo sapiens (human) KANSL1 antisense RNA 1 (ENSG00000282799.1)
lncRNA
SO:0001904
ENA,Ensembl,GeneCards,LncBook,LNCipedia,MalaCards,NONCODE
GTACCTCCATCTGCGGAGGCCGCGGCGCCCGGCCCCAGCTGCCCCGGACGTGCGGCGACGGCACGCAGCACTGCGGCAGGGGGAAGCCAGCCCTCGCTGCGGCCGAGGTGAGTCTAACCTGAGGCACTGACGCCGTCACATGCCCTCCGTGCTGGGGCCGGCGGTGCGGCTCGCCAGTTGAGGGGCAGGGCGGGCCGGCGCCGCGGAGCGAGAGGACGTGAGCGAGGAACTGTTTGCACTGTGTAGTAAAGAGGGAATGGCCATGAGATGTGAGTAGAAGCCCCCTGGACAGCCTCCAAAAGAGAACTGTGAGAAAAGGT...
URS00000254A6_9606
9,606
Homo sapiens (human) hsa-miR-338-3p
miRNA
SO:0000276
ENA,GeneCards,IntAct,LncBase,MalaCards,miRBase,RefSeq,TarBase
......................
TCCAGCATCAGTGATTTTGTTG
URS00000254DA_9606
9,606
Homo sapiens (human) non-protein coding LINC01099:3
lncRNA
SO:0001904
GeneCards,LncBook,LNCipedia,NONCODE
AAACATTTGAGAAAGCCAGAAAGCAGAGGGGAGGAAGCTCCACCGTCATGAGAATGGGAAGCAGAGGCAGCGGCAGCGTGCACAGACATCCTTTGAAGGTTTGTTATAAACACAGAAACTGATGTCTGGGAAAAGGGCCAGTTGGGTTATCCTTCTTGTTTCATTGTTTGTCCTGCTTAAAATTGAGAATGAACAGAGACTCACTGATTTCATCTTCTGAATTTGAAAAGAATGACACACATTGCCCTGCAATTCAGGTCTGACTTCAGCTGCAGGAAGACAGACCCCCAACCCAGAACAACCCTGCGTGGGGAATCCTT...
URS000002562E_9606
9,606
Homo sapiens (human) piR-47733
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGACATTAGAAAACTGGTTGGGAGATAGTGT
URS000002569A_9606
9,606
Homo sapiens (human) hsa-miR-514b-3p
miRNA
SO:0000276
ENA,GeneCards,MalaCards,miRBase,MirGeneDB,RefSeq
ATTGACACCTCTGTGAGTGGA
URS000002569C_9606
9,606
Homo sapiens (human) piR-53291
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGCTGTTAGGTTGGTGCAAACGTAAT
URS00000256A7_9606
9,606
Homo sapiens (human) piR-49839
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGATGATACATTCTTCTGTGCTGTTGT
URS00000256DF_9606
9,606
Homo sapiens (human) piR-38155
piRNA
SO:0001035
ENA,GeneCards,PirBase
TACCACAGGAAACACAAGCCCCCAACGC
URS00000256EB_9606
9,606
Homo sapiens (human) piR-30853
piRNA
SO:0001035
ENA,GeneCards,PirBase
AGAAGATCTAGCTAAGATCATTGATGAAGGT
URS00000256F6_9606
9,606
Homo sapiens (human) non-protein coding lnc-SMOC1-2:1
lncRNA
SO:0001904
GeneCards,LncBook,LNCipedia,NONCODE
CTTGACCACCCAGGAGCTTGGCTGCGCCTGCTGCAGTCTGCGTTTCTGATAAATTGAAACCAGTTTTAATTCTTCTGCCCGGGAGACCTAACCGCCGAATGCGTTCGGAGCTGTACTGGAACCCAAGGAGATGTTCACAAGGAAGATGGAAAGTAAGCTGTGTAACATCAGCATTGGGAGCAAGAGCCACAAACCTCATTTTCAAGTTGGGAAGAAACTCAGGACCCGAGAAGCTACAGGATTCAGCCCAGTCACAGAGCTTGGTGTGTATTTGTTCATTCGCGCACTGCTATAAAGAAATACCTGAGACTGGGTAATTT...
URS00000257B5_9606
9,606
Homo sapiens (human) piR-35693
piRNA
SO:0001035
ENA,GeneCards,PirBase
GCTTAGAGATGGAAAGTAGTTCAATGGT
URS00000257EE_9606
9,606
Homo sapiens (human) RGPD4 antisense RNA 1 (head to head)
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia
TGATTTGAGGCACCTGAGGAACTAAGAGCCCAGGAAGAAAGGACAGTAATGAAAAAGCCAACAAATGAGACCAGTATTTAGTGGTATTTCCCCTATAGGCAATTATTTATTCAAAAATACAGGAACAGCATTTATTTGCTTAACTGCAGATATGCAAACAAAAAATTTAAATGGTCTTAGTTACTATCTACATGCAGATGCTTCCAATCTTAATCTCTAGTCATGACCACTGATCCTTTTTTGATTCCTTTAATTCAATTTATATATCTCTAAGTGAATATCTTGTCAACACTGACAATCAAGACTAAGATGTATTTATT...
URS0000025806_9606
9,606
Homo sapiens (human) piR-54142
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGGAGATGGTCCAAGTTGCTGTGTGC
URS00000258A3_9606
9,606
Homo sapiens (human) non-protein coding lnc-SLC35G1-2:1
lncRNA
SO:0001904
ENA,GeneCards,LncBook,LNCipedia,NONCODE
GCTTTGATTTATACAGACTTGTAGGTTTCCCTGTGAATCTGGGAGCAGGATGAAGTGATGCTCAAAGGATCAAGATCAAAAGGCAGTGGAAAGAAATGAAGGATGCAGGAGAAAGATGGACATTGTGAATAAAGGGAAGAGAGAGAGGGGTGATGGGGAAGGTAGGAAGATCAGGACAGAGCAAGGAACAACAGGATGAGATTCAAAAGAAAGCAACATGGGGAACATGCAAGTGGTGAGGGCTAAGAAATCTTAATAATGAAGAAACCATGGGGACTAAGAGGAAGTTGAAGAAAGCTGCTGGAGCAACCTAGAGAGAC...
URS00000258F5_9606
9,606
Homo sapiens (human) non-protein coding lnc-MAF-4:1
lncRNA
SO:0001904
ENA,GeneCards,LncBook,LNCipedia,NONCODE
CGGACAACGGAAAGGCAGCTCTATCTGAAGGTGAAACTGCTCTAGCTAACAGGGAAAGCTCTTTAAAAGACCATCAAAGAGACACCCTGCACAATGCCTGCTTTCCGGAGGAGCCTCGCGCCCACAAGGCCATCCCCCAAATCCAAAATATGCTGGCATGCTAATCGCGTGAGACAACTTGGCCCACGGACAGCCACAAAGCACAAAAACAAAACACAAACTCACTCAGAGAAGAAACAAGAATCGTGTTTTCCTGGCATCTACGAGAAGCGCTTTATTAGAAGCGCTTTATTTTTCCTCTAGATTTCTTTTCTAAAAAA...
URS000002595C_9606
9,606
Homo sapiens (human) small vault-associated RNA b*
vault_RNA
SO:0000404
ENA
TTGTTCGAGACCCGCGGGCGCT
URS00000259AA_9606
9,606
Homo sapiens (human) piR-51994
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGCCTAAGTAATTTCTTCTTAACTCTGG
URS00000259EE_9606
9,606
Homo sapiens (human) piR-56703
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGGGTGGTGAATAGGTTCTCTCCTTGCCTT
URS0000025A43_9606
9,606
Homo sapiens (human) novel transcript, antisense CACNA1S
lncRNA
SO:0001904
ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE
TATTACTTCAAGCAAAGCTGATGCAGAGAGATGAGCCAATTGAGCAGGAGACAATGTAAGCAGCTGTGGGGGTGTCGAGTACTCCCTCCTGCCTGTGGGAGCTGCACCGTGGAGTCTAGCTTGTCACCCTCCGGAGGCAGAGCCCCTCCTCCCTGCCTCCTCTTGGTCTAGATGGACAGCCATGGCAGCGGAGGCTGCAGAGCTGAGCAGGCCCAGCTGCAGCCTCCCAGCCTTTGGAACCCTGCTTCTCCATCTTGGCCACACATAGGATCACCTGAGGAGCTCAAAGTCTACAGCCCAAGGTTGGTGAGATGGGAACC...
URS0000025B8A_9606
9,606
Homo sapiens (human) piR-52251
piRNA
SO:0001035
ENA,GeneCards,PirBase
TGCCTTCAACATGTCCGAGACTGCGCC
URS0000025C1D_9606
9,606
Homo sapiens (human) partial tRNA-Phe
tRNA
SO:0000253
ENA
GACGGGCTCACATCACCCCATAAACA
URS0000025C4E_9606
9,606
Homo sapiens (human) piR-32304
piRNA
SO:0001035
ENA,GeneCards,PirBase
CAGAACTGCCGTAGAATCCTCATTTA
URS0000025CDF_9606
9,606
Homo sapiens (human) 12S ribosomal RNA
ncRNA
SO:0002344
ENA
.....................((((((.(((.((((((((....(((.(((..........................(((....(((.....)))....)))....(((....(((..(((....))).)))......)))...............((....)).....)))))).........(((...(((((....))))).)))..)).)))))).....((((((((..............................)))))))).))).))))))....(((.......((((...(((..................
AATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGAGTTCACCCTCTAAATCACCACGATCAAAAGGGACAAGCATCAAGCACGCANNAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACCCAAGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCACCCCCTCCCCAA...
URS0000025D62_9606
9,606
Homo sapiens (human) piR-35637
piRNA
SO:0001035
ENA,GeneCards,PirBase
GCTGATCATCGACTCCCCTCAGTCTCACCC
URS0000025DA7_9606
9,606
Homo sapiens (human) piR-41726
piRNA
SO:0001035
ENA,GeneCards,PirBase
TCAGGGAACATGATCTACTAGAGGGGTGGT
URS0000025DD6_9606
9,606
Homo sapiens (human) piR-38253
piRNA
SO:0001035
ENA,GeneCards,PirBase
TACCATTTTGGCGTGAGAGCTGGTGGT
URS0000025E11_9606
9,606
Homo sapiens (human) piR-36712
piRNA
SO:0001035
ENA,GeneCards,PirBase
GTTCACTGATGAGAGCATTGTTCTGAGCCA
URS0000025E26_9606
9,606
Homo sapiens (human) piR-61643
piRNA
SO:0001035
ENA,GeneCards,PirBase
TTGGTGGTGTCAGTGGAGATTGCGATTGCC
URS0000025E52_9606
9,606
Homo sapiens (human) novel transcript
lncRNA
SO:0001904
Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia
(..(...............................................................................................................................................................................................................................................................................................................................
TATGAGAACTGTAAATATCTGCAGACATTTTCTCTTTCCTATTCTAAAACTTACTAAAATTTTAGATACAGGAATTCTCTGTTGAAAAAAATATATATATGTATAGATAGATACACACGTATATATATACGAAATGTGAGAAAAAATATATATATATATTCCTTTGATGGTCTTTAATATTTAGTTTAAAAACTTTAAGGAAATCATAAAACTTTTAAATTTCAACTCTCTCTAAGATTATATGGGCAGTTAAGTTTAAATATAGAGCATATATTTCTTCAGTTAAAAGGAAGTGTGTATTTACTGCTGTTCAATTAGAA...
URS0000025EC5_9606
9,606
Homo sapiens (human) non-protein coding lnc-CLCNKB-1:1
lncRNA
SO:0001904
ENA,GeneCards,LncBook,LNCipedia,MalaCards,NONCODE
GTCCGCACTCGCGGCCCCTAACCTGCCCCGGGAGCCCGGGAGTGCGGCTTGGGAAGGAGGGAAAGGAGTGTGTGAGCAGGGATTGGCCCGAACCTATCTCCACGCTCTCCCCCGGGACTGGAGGTGAAGGGGGGCGTGGAGAAAATCTCAGGGAACAGGGGCTTCGACAGGGGGCTCCCGCCCGCCCGAGCCCCCTCCCCAAAATGCGAGGCCTGCACAGTATGCCTTCTCCGCAAAACCTCGGCAAGCGGGTTAGTGAATTCAGGTCACTAAGAAGCTGAGCCCGCGGAAAGCTGCCCAAACACCCCCTTCTCTAGGGG...
URS0000025ECF_9606
9,606
Homo sapiens (human) piR-42994
piRNA
SO:0001035
ENA,GeneCards,PirBase
TCCATGCTTTCAGAGGGACTTGCGGCCACGA