rnacentral_id stringlengths 18 21 | taxid int32 9.61k 1.04M | description stringlengths 12 314 | rna_type stringclasses 28
values | so_rna_type stringclasses 80
values | databases stringclasses 686
values | secondary_structure stringlengths 0 9.99k | sequence stringlengths 10 348k |
|---|---|---|---|---|---|---|---|
URS0000079C68_9606 | 9,606 | Homo sapiens (human) novel transcript | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE | TGGGTTGCTTCACTGGTTTTGCTTCTTAGCTCTCCAGTTACGTGTTACAAATTCCCTAATTAATTTCCTCTGCTTAAAATACCTAGAGAGGAGAGGTTTCTGCTTCCTGGCTGGGTCTTGATTGATTCACTGATCACAGGTATGGAGTAAGACTTGGACAGTCAGAGCATAGGTTGTCAACTGTTCCAGATATTAACCAAGGTCAAGTGAAGCACTCTCCTCTCCAAGAAATTTCAGCATGGAGAGAAAGAAAGTTTTACCACCAATTTGTGCCTGAAACACAAGATGAACAGACGTCTTCTGCATTAAAAAAGGACATA... | |
URS0000079D48_9606 | 9,606 | Homo sapiens (human) hsa-miR-1180-3p | miRNA | SO:0000276 | ENA,GeneCards,IntAct,MalaCards,miRBase,MirGeneDB,RefSeq,TarBase | TTTCCGGCTCGCGTGGGTGTGT | |
URS0000079DE8_9606 | 9,606 | Homo sapiens (human) 16S ribosomal RNA | rRNA | SO:0000651 | ENA | ((.....(..((((........(....).(...).................(......)........((.....((.....))....)).......)).)).............((....))....)..................))...........(((.......)))..((((........))))((((((.......(.((((((..((....))...)))))))..((((...((((((...((((((((((((.(((.....)))...((((.((((........))))))))..).))))))))))).((..... | GCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAAACCTGGCGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAGAGCCAAAGCTAAGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCG... |
URS0000079DF0_9606 | 9,606 | Homo sapiens (human) novel transcript | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE | AGTGTTCTTCATGTAAGCTGGAAAAAATCTGGTAGAAGACTAGTTGTTGACAGTTTGAATTATAGAATCAAAACACCAGGGTAAAAGGTAGGGTTTTCAGTATACCACATGTACAGACTCCTCTGTGAACTGGAAAGAACTTCCTAATGTAACCAAAGGGAATTTTCTGTCTCTGGTCTCTCTTGCCAAAGCAATGAGGTCACACCTGTGTTCATGATTTATTGAGCCACTACAGTGCACACAGAACTATGCAGGACAACCTGAAAGAAGGATCACATATGCTTCCTCTTCTCAAGAATTTCATTTGATTAAAAAGTAAG... | |
URS0000079E83_9606 | 9,606 | Homo sapiens (human) snRNA-U6atac-related | snRNA | SO:0000274 | ENA | TTGCACTCCCCTTAACAATAATGAAAGAGGCCTCAGGCCTGACAGCAGGGACACGGTTAAGACACTGCCACCTGCTCCCTCACTTCT | |
URS0000079EB1_9606 | 9,606 | Homo sapiens (human) piR-46007 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TCTGCCAATATTCTTTTAACTGTGGGAA | |
URS0000079F22_9606 | 9,606 | Homo sapiens (human) piR-61720 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TTGTATGAAGGCACCTAGACTTAGTGAGT | |
URS0000079F61_9606 | 9,606 | Homo sapiens (human) non-protein coding LINC02063:3 | lncRNA | SO:0001877 | GeneCards,LNCipedia,NONCODE | AGATTGCAACACAATACCACAGTGAGGAAAGCCAGATGTTGCCCACATCCCCCTCGGAGAAACCCGCCAGGGGCATGTTGGGACGTTGGGAGTGTGAGCCCTGGAGACAGTGTTGTGGCAGGGATCCAGGTTCTCCCAGCTGCCGGCCACAGGGCTCTGCCCAGGGGTCCTGAGTTTCCTCAATGGCATTCTAATCCATGAGTGTTCAGAGAGAGCAGGTGGGCTCCCCTACCCGGCGCCTTCCGACCGGCATCTGGAAAAGGATAGTCAGAAACGCAGTGAAAATTACGCCTGCAACCCTGGCAGGCAGGGAAGCACTT... | |
URS0000079F78_9606 | 9,606 | Homo sapiens (human) hsa-miR-5100 | miRNA | SO:0000276 | ENA,GeneCards,LncBase,MalaCards,miRBase,RefSeq,TarBase | TTCAGATCCCAGCGGTGCCTCT | |
URS0000079FA9_9606 | 9,606 | Homo sapiens (human) piR-43711 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TCCCTGACCTCGCCCACTCTGGTTTGCCTGC | |
URS0000079FC4_9606 | 9,606 | Homo sapiens (human) piR-32252 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | CACTCAGAAAGGAGCAGGATGAGGGAATGC | |
URS0000079FF7_9606 | 9,606 | Homo sapiens (human) piR-58459 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGTGAAGTGTGCGTGTCTGACGGATG | |
URS000007A060_9606 | 9,606 | Homo sapiens (human) hsa-miR-330-3p | miRNA | SO:0000276 | ENA,GeneCards,IntAct,LncBase,MalaCards,miRBase,RefSeq,TarBase | GCAAAGCACACGGCCTGCAGAGA | |
URS000007A068_9606 | 9,606 | Homo sapiens (human) has-miR-mizuguchi-142 | miRNA | SO:0000276 | ENA | TGGGGTGTGCTTTGGAGT | |
URS000007A088_9606 | 9,606 | Homo sapiens (human) piR-62031 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TTTGGTGATCATTCCTCTTCGGTGAT | |
URS000007A090_9606 | 9,606 | Homo sapiens (human) piR-35919 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | GGCACAAGATGGAAGGGACCTGGGTCCTGGT | |
URS000007A092_9606 | 9,606 | Homo sapiens (human) 16S ribosomal RNA | rRNA | SO:0000651 | ENA | ((.....(..((((........(....).(...).................(......)........((.....((.....))....)).......)).)).............((....))....)..................))...........(((.......)))..((((........))))((((((.......(.((((((..((....))...)))))))..((((...((((((...((((((((((((.(((.....)))...((((.((((........))))))))..).))))))))))).((..... | GCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAAACCTGGCGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAGAGCCAAAGCTAAGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCG... |
URS000007A098_9606 | 9,606 | Homo sapiens (human) piR-61026 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TTGACTTGTTTGTCCTGGTGGGCTGTT | |
URS000007A0F7_9606 | 9,606 | Homo sapiens (human) novel transcript | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE | ATCAAAAGCTTGAGCACAAACAGATACCTCAGCCCGGAGTTTCTGTTCCTGTTCTTGAAGAGACAGACTGGTGAGCATGCAAAATTACAGGAAATGCAGAGAACAAAATGGGCAGAGCAACCAAAACTGTGGTGTTTGCATCAAATACAGGTCAAGAGTAAACTTATTTTCCTATGAAATTCAAGAACATGTTGAAACTGGAAAGAGCGGGACAGGCTGGTAGCACCTTTTAAAGACCAAGAGAGGCCGCCTCATTAAATATTAAGAACTTGGAGGAAAGAGGTGGATTTACACTGATAAAAGGTTCATTTAAAATTCCA... | |
URS000007A135_9606 | 9,606 | Homo sapiens (human) non-protein coding lnc-ANKRD40-2:1 | lncRNA | SO:0001904 | ENA,GeneCards,LncBook,LNCipedia,NONCODE | ACTTTGCTTTTGAGTGTTCAGAACCAAGATGGTTCTTGCTGGAAGGGCTCCGGAGAAGCAGTAACGGCCTTGTGGGTTGGGCTGCAGCAGAGAAATGGACCAAACCTCCCCCAGCCTTCATGGCCCAAGCCCCATCCTCCCTCCCCAACTGACTGCTGCTCCAGGCAGGATGGATGGAGCATGTGCGGTGCCTCCCCCGCAAAAATGATGACGAGGTTAAAGGAAAAAATAAGTTACATTACAGTTTCCAAAATGGTTCTCGCTCTCCGCTGAAGATGGGCCACCGTTGGGGCTGCAATGTGCTCGCGGTCCCAGCTTGT... | |
URS000007A139_9606 | 9,606 | Homo sapiens (human) piR-61819 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TTGTTGTAGAAGCAATGGTCCAGCTCCCAGG | |
URS000007A1BB_9606 | 9,606 | Homo sapiens (human) hsa-miR-548aj-3p | miRNA | SO:0000276 | ENA,GeneCards,miRBase,RefSeq | TAAAAACTGCAATTACTTTTA | |
URS000007A1CC_9606 | 9,606 | Homo sapiens (human) piR-54340 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGGATAAGGACAGGTGGAAGCAATGGT | |
URS000007A203_9606 | 9,606 | Homo sapiens (human) piR-60077 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TTATCAGGGACCCTGTGGGGATGAGGTGT | |
URS000007A223_9606 | 9,606 | Homo sapiens (human) piR-59771 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TNGGTGATCCCTGCTGGCTCAGGTGTTTTC | |
URS000007A25C_9606 | 9,606 | Homo sapiens (human) transfer RNA-Cys | tRNA | SO:0000253 | ENA | (((((((..((((...)))).(((((.......)))))....(((((......)))))))))))). | AGCTCCGAGGTGATTTTCATATTGAATTGCAAATTCGAAGAGGCAGCTTCAAACCTGCCGGGGCTT |
URS000007A265_9606 | 9,606 | Homo sapiens (human) piR-59257 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGTTAACAGGCTGTATGATGTTGGCCACA | |
URS000007A3C3_9606 | 9,606 | Homo sapiens (human) piR-51271 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGCCAAGCCATGGGTAGCCTGGGTGT | |
URS000007A3D4_9606 | 9,606 | Homo sapiens (human) CTNS antisense RNA 1 (CTNS-AS1) | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,HGNC,LncBook,LNCipedia,MalaCards,NONCODE | CTGCAGCCACGATCATGGTGACAAATGCGAAGAGCCACGCGAGCACCAGGAAGCCGATGGCAGGCCAGGACACGCGCTGGCCACCGCGCTGGGGGCGAGAGGAGGGCAGAGATGTGGACCCACACAGAGGCCACGCCGGGGCTGAGCAAGGACGGCCCCGGATAGGGCGGGCTTAGAGAGGGGCACGGAGGCTGGACCCTGGCCTTGAAGGAGCCCCTGCAAGGTGGGGGCTGCACTGGGGTTGTGGCAGGGGAACATGTGGACCACAGAAAGCATCACACCTGGGCTGGTGCTGGACATCCCCAGCACCAACCACACCT... | |
URS000007A431_9606 | 9,606 | Homo sapiens (human) miscellaneous RNA | misc_RNA | SO:0000673 | ENA | ACGGGCAAGGCCAAGTGGGATGCCTGGAATGAGCTGAAAGGGACTTCCAAGGAAGATGCCATGAAAGCTTACATCAACAAAGTAGAAGAGCTAAAGAAAAAATACGGG | |
URS000007A468_9606 | 9,606 | Homo sapiens (human) HOXA cluster antisense RNA 2 | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,MalaCards,NONCODE | ATTGACCAGAACCTCTTTCAACAGGCCGCGGTTGCCAGGAACCGTGGAGGGCCAACTCCTCCCAACCGCCCTGGTGCAAAGTCCCACGCGGCGAAGAGTTTTGGAGCAGCGCTTACCTAGAAAGATGTTTAAATTCTGAACCAGGAATTGTCTCCAACTCCAGGCGCTCAGGGAATCGCCTTTTCCGGTGTCCAGGCGCTCTGCAGACAAATAAACAGCAGAAGCAAATGGTCACCGAGCCGGCAGTCAGCTTTCTGGGAGTGGGAGATGATGGGGAAAGAGGAAAGAATCGTCCGCTCGCCGGACCCTGGCTTGGAGAA... | |
URS000007A50B_9606 | 9,606 | Homo sapiens (human) piR-42238 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TCCAAGACCGGAAATAAGCAAATGTGTGCTC | |
URS000007A53C_9606 | 9,606 | Homo sapiens (human) non-protein coding lnc-PJVK-2:6 | lncRNA | SO:0001904 | ENA,GeneCards,LncBook,LNCipedia,MalaCards,NONCODE | .....................((((.......................................................................................................................................................................................................................................................................................................... | GATTTAACAGCTTTTGTTTTGGGCAGAAGAACCTATGGGCACAAAAAGCAGGAACGAGTAGCGGTGGCTGAAGAACGAGCAGGAGCTTGAATTTCAGTTTTCTTATGAGGAATTTTCCAGAAAAGATATCTTCACTGTGAAATAACTAAATAAATGCCCACTCAGTACAGTCACTGTCTCCCTTTTGGAACTTGATGGCACCTTAAGCCCAGGTTTGCCTCCACTCTAGAAACTCATCAGAGTGATGCCCTTCTCAAATGGGGGAGGTCCCAAAGCGGATATCCTGGCAGTGTGAAAGGCCGGCTAAAGCTTTCCCTGCA... |
URS000007A57E_9606 | 9,606 | Homo sapiens (human) non-protein coding KLF3-AS1:9 | lncRNA | SO:0001877 | GeneCards,LNCipedia,MalaCards,NONCODE | CAGGATATCGGCCATGTTAATGAGTCTGATGTTGCTAGTATCACAGGCACCGGAAAATATGCACATTATGCTGGAGCATTAGAATGCAACAGAAAGAGCCCTGGGCTTGGAGTATGCAGAACTGGTTCTTGTTACAACTCCTCTTACTAGTGGGCTGCTATGGACCTAAAGTGGAGGGCTTTGAAATTTCCTGCTTAATTGGGCTGCATGTCATTGCTGTCCTTAGAAGTTGCTCTGGGATGCAGGTGCTGGTTTCTTGGATCTCCTTTGCTGGAATTTTGCATGTCTTGTTTTGTTGTTGTACCAGCTTTGTGGATCAG... | |
URS000007A5A4_9606 | 9,606 | Homo sapiens (human) piR-60262 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TTCAGATGCGTGCAGGGTGATGTGTGGT | |
URS000007A5C5_9606 | 9,606 | Homo sapiens (human) piR-60911 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TTCTTTAACAATGCAGGTGAGACGCTCC | |
URS000007A723_9606 | 9,606 | Homo sapiens (human) long intergenic non-protein coding RNA 2375 (LINC02375) | lncRNA | SO:0001877 | GeneCards,HGNC,LNCipedia,MalaCards,NONCODE,RefSeq | ATGGGCTGAAGGCTTTTGAAATCAAATCACAGTAGAATTGCCTGAAGGAAGTGAGAGTGTATAGCCTGATGCCGAGAAGAAAAAGCCTGGGGGTAACATACAGAGAGGCCCAGCAAGCAGATTTGAGAGATTGTGCTCTGTACTTGTGCAATCTAATTGTGTCCTGTTAGAAAGGAGATGTCCTGGGAAACTCAGATTAAGAGGACAGAAGCCCAAAACTAAGCTGTACAGTCAAAAACGTCTAGCTGTTTCTTGTAGCAGATTGTGCCAGTAAGCGTCACTGAAGAGTAATTTCAAGGGCTGGTGAAAATATAAGATAA... | |
URS000007A7AC_9606 | 9,606 | Homo sapiens (human) piR-48866 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGAGCTGTGAACTATACATTTGTGATGGAA | |
URS000007A8A0_9606 | 9,606 | Homo sapiens (human) BACE1 antisense RNA | antisense_RNA | SO:0000644 | ENA | GGCTCACCGCAACCTCCACCGTCCTGAGTTAAAGTGATTCTCCTGTCTCAGCCCCCTGAGTAGCTAGGATTACAGGCGTGCGCCACCACACCCAGCTAATTTTTGTACTTTTAGTAGAGATGGGATTTCACCCTGTTGGTCAGGCTGGTCTTGAACTCCTGACCTAGTGATCTGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCTAGGGGAAGAGTGTTTTAAGAGCTCTGAGTAGAAGGGTCTAAGTGCAGACATCTTGGCTGTTGCTGAAGAATGTGACTCTCACCGCCTCCC... | |
URS000007A90A_63221 | 63,221 | Homo sapiens neanderthalensis transfer RNA-Lys | tRNA | SO:0000253 | ENA | (((((((..((((...)))).(((((.......))))).....(((((.........)))))))))))). | CACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAGATTAAGAGAACCAACACCTCTTTACAGTGA |
URS000007A90A_741158 | 741,158 | Homo sapiens subsp. 'Denisova' (Denisova hominin) transfer RNA-Lys | tRNA | SO:0000253 | ENA | (((((((..((((...)))).(((((.......))))).....(((((.........)))))))))))). | CACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAGATTAAGAGAACCAACACCTCTTTACAGTGA |
URS000007A90A_9606 | 9,606 | Homo sapiens (human) mitochondrially encoded tRNA-Lys (AAA/G) (MT-TK) | tRNA | SO:0000253 | ENA,Ensembl,Expression Atlas,GeneCards,HGNC,MalaCards,Rfam | (((((((..((((...)))).(((((.......))))).....(((((.........)))))))))))). | CACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAGATTAAGAGAACCAACACCTCTTTACAGTGA |
URS000007A95D_9606 | 9,606 | Homo sapiens (human) non-protein coding lnc-PIGF-1:1 | lncRNA | SO:0001904 | ENA,GeneCards,LncBook,LNCipedia | AGGAGGCCTGGGGAACAATGAGTAAGGCAGAGAGGGAACAGAGGCTTGTAGGCCACTGTGCGGACTTTGGCGTTTAGTCTGAGCTGGGGACCCACTGGAGGATTCTGAGCAGAGCAGTGACATGATTGCGCTTACATTTTTAAGACTTACTCTGGCTGCTGTGTTGAGAACAGATGACCATGGGGCATAGACAGAAGCAGAAAGGTTGGCTGGAGGAAACGGAGAGAAAATTTACATCTGGTGGAGCATAAAGAAACCAGCTAGAGGACTGGCCTTGTCATTATCTAACTGTGTTGTGACGAACTGGCACTTCCTCATCT... | |
URS000007AB1D_9606 | 9,606 | Homo sapiens (human) piR-38246 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TACCATGGATAGCCCAGTGCAATTGAGAGGC | |
URS000007AC12_9606 | 9,606 | Homo sapiens (human) piR-48989 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGAGGATCAAAGCAGTCCCAATTGTTCAGGA | |
URS000007ACA1_9606 | 9,606 | Homo sapiens (human) microRNA hsa-miR-3189-3p | miRNA | SO:0000276 | ENA | CCCTTGGGTCTGATGGGGTAGC | |
URS000007ACDF_9606 | 9,606 | Homo sapiens (human) piR-56132 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGGGCATAACAGTCGATGAAAGCGGGTGG | |
URS000007AD56_9606 | 9,606 | Homo sapiens (human) piR-60168 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TTCAAGGTGACTGAGAGGTTTATTTTCATA | |
URS000007AD95_9606 | 9,606 | Homo sapiens (human) novel transcript | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE | ACTACATCCAGTGCCCAAGATTTGTAACCACGTTAATCTGTTAGAAGCCTAGATGTGTGACTGGAGATGCCTCCTGTCCATTCAATCTGACTCCAATGTGGTTCTGCAGCACTGGACAAAGATGGGAGATTGAAACAGGAGCCCCTGCGATGGGGGAACAGAGCCAGGGAGCAGGGGTTGGACAGGTAAGCCTCCATATACCAAGCCCTTCAACTCCTGGAGTTACAGTTATCCCTCCTTTGTTCATTAATGATTCACCATGTACCCACTGCCAATGGTGGGCTTTCTAAACACTGCACTCTACATGAGAGATAGAAAGA... | |
URS000007ADA8_9606 | 9,606 | Homo sapiens (human) piR-55356 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGGCTTGCAGACGCTGCAGAAGCAGGA | |
URS000007AF2B_9606 | 9,606 | Homo sapiens (human) piR-59214 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGTGTGTTCATTGGGTATTACGACAAC | |
URS000007AF8E_9606 | 9,606 | Homo sapiens (human) MAP6 antisense RNA 1 (MAP6-AS1) | lncRNA | SO:0001904 | ENA,GeneCards,HGNC,LncBook,LNCipedia,NONCODE,RefSeq | AGACCAGCCACCGGGGACTCCAGAGAGGCCTCGGCCCAGCTCCCGGAAAGGGTCTCCCAGCCAGGCCTTCTAGCGGCCCAAAGCGGATGGAAACTTGACCCAGAATGGACAAGTGATTCTCCAGGTCCAGGACTAAAACATGGGCCTCTCAACATCTCAGCAGGCAGGTGGAAGAGATGGAGCAAACTCACTTGGAGCAAAGATGGGCAGGAGGGGAACAGCGAAGCCCAGGCCAACGGCACCACAGGGCCCCTGGCAGAACATGGACAGAGACAGTGTGATTCCAGGGCTCTGTTCCCTTGCTGCTGCCTCCATGGGCC... | |
URS000007B044_9606 | 9,606 | Homo sapiens (human) piR-36253 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | GGGGGTGTAGCTCAGTGGTAGAGCGCGTG | |
URS000007B049_9606 | 9,606 | Homo sapiens (human) piR-33636 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | CTATGACGATGCTGGGCGAAGCGGTTGGA | |
URS000007B0EA_9606 | 9,606 | Homo sapiens (human) piR-36808 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TAAAAGGAAGAGGTTTCCACCACTGA | |
URS000007B131_9606 | 9,606 | Homo sapiens (human) piR-51445 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGCCACTTGTTGCAGTCGCCCACAAGCTGTA | |
URS000007B13A_9606 | 9,606 | Homo sapiens (human) piR-50530 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGCACATTGGTGTGTGTGTGAGGAAAGCA | |
URS000007B181_9606 | 9,606 | Homo sapiens (human) piR-32779 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | CCACGGAAAGCTTCAGACAACATCAGGGC | |
URS000007B1B0_9606 | 9,606 | Homo sapiens (human) piR-55340 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGGCTTCACCTATTGAAACTGGTGTTTGT | |
URS000007B231_9606 | 9,606 | Homo sapiens (human) non-protein coding lnc-LRP8-3:1 | lncRNA | SO:0001904 | GeneCards,LncBook,LNCipedia,NONCODE | (((..(((........................................................................................................................................................................................................................................................................................................................... | GCCTCGGGCCATGCAGCTGGCTGAGTGAGAGCTCCTAACTTGTACTTTCTCCCCTCCCCGGAAGCTTTGGTTTGTTGGGGGAAGCAGATTCATATCAGACCCAAGGCAACTCAGCTGTGATTGAGATAGACATTGAGTCTTTTGGGAGACAGAAGGGAGGGAGAGTGCCAGTCAAAAGGGTTTCGTGAAGAAGGTTGCATCTGACTGGGACAGTTAGGCCTCTGTGTACCACTTTAAAAGGTGTTGACTTTTCTAGTAAATATCCTCCATGTCAAAGTCTATCTCAAGATCTGTTCCAGGACAACCCCGCCTGCAACAGG... |
URS000007B2B2_9606 | 9,606 | Homo sapiens (human) Homo_sapiens piRNA piR-hsa-13798 | piRNA | SO:0001035 | ENA,PirBase | TGCACTGGCCTGGAAATTTATGACACGNT | |
URS000007B2F1_9606 | 9,606 | Homo sapiens (human) piR-36752 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | GTTTTGAGTGGTGTCCAGAACAGGAG | |
URS000007B3F0_9606 | 9,606 | Homo sapiens (human) piR-31040 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | AGCAGGATGTTATCTGGGCCGAACTGC | |
URS000007B43B_9606 | 9,606 | Homo sapiens (human) long intergenic non-protein coding RNA 1378 | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE | GTTCTTGTCTGACTGTCTTATTTCAGAAAGGCAGCCATCAAGCTCTGAGATTCTTTCCTCCACTTGGTCTATTCTGCTACTAATACTTCTCAGCCCAGTTCAGAACTCCTGTTGGAGAGATGATTCAGCTGTTTGCAGGAAAAAAGGCCCTCTGACTTTTCTCGAGTATAAAGAAGAGGATGAAGGCTTAAGCAGGAAACTTTGACAGCTCCAAAGACCTTAATCCTTATAAAGAAGTAATGAAGTTTCAACTTTGCACTCAGGTTTTCAAGAAACCTTTGCAACTTTAACATAGCATTTTGAGGAGTAAAAGTGACACC... | |
URS000007B4E1_9606 | 9,606 | Homo sapiens (human) piR-56159 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGGGCATGTGTTACAGTAGACTCTGTTAG | |
URS000007B54E_9606 | 9,606 | Homo sapiens (human) partial ncRNA | snRNA | SO:0000274 | ENA | GGAGAATCCTTTGAACCCAGGAGGCTGAGGTTGCAGTGAGCCAAGGTTTTGCCATTGCACTCCAGCCTGGGCGACAGGG | |
URS000007B578_9606 | 9,606 | Homo sapiens (human) piR-31318 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | AGGCACAGGATGGGGTCATGGTAGGCCAG | |
URS000007B5E7_9606 | 9,606 | Homo sapiens (human) piR-50453 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGCAATTCTTCTGCCCTTGCATCTTCCTCC | |
URS000007B5E9_9606 | 9,606 | Homo sapiens (human) piR-40049 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TAGTGGTCCAAGGCAGAAGGGATGGT | |
URS000007B653_9606 | 9,606 | Homo sapiens (human) piR-61258 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TTGCTAAACAGTTGGTGGGCAAGTGA | |
URS000007B6A2_9606 | 9,606 | Homo sapiens (human) long intergenic non-protein coding RNA 1088 | lncRNA | SO:0001904 | Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,MalaCards,NONCODE | TAGAGAATGCTGCCGGGACTGACCCATGTCTTTTCTGAATCACCTCTGACATATGACCAGGAATACAACATGTTTAAGACCACAGAACATCTGCATAGGCTGTAAATTTCGTTGAATGATGGATGCAAAGATGGAAGACAGATGGATAGAGGAAAAGACAGAATCAGATACTGGATGAGTTAGTACTGCTGCCTGTGCTTCAGAGCTGTCTTATTACCACAAGGCCGGCAAGCATCAATGTCCCCACATCCCCCTCTGCCTCCCCCTGAAATGTACCGATTTATATGAAAATTAAGATTACAAATTAAAGCCTGGCTATC... | |
URS000007B6F5_9606 | 9,606 | Homo sapiens (human) novel transcript, antisense to RNF166 | lncRNA | SO:0001904 | Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,NONCODE | TGCTCTGAGACATTTTATTTAAACTTTTTTTTTTAAAAAAAAGACAGCAATAATTAATGCCAAGAACAGAAAAGAATGTTGACGTGTTGCCCGGCCCGCCAAGCGGGCCCCTGCCCAGGCCCCCAAGCTCTGCCACCACTGGGGTGCTGCAGGAAGTTGGCGCTCTTGTAGCTGGGGTCCCCCCAGGGCATTGCCGAGCAGATGGGGCACACC | |
URS000007B748_9606 | 9,606 | Homo sapiens (human) 16S ribosomal RNA | rRNA | SO:0000651 | ENA | ((.....(..((((........(....).(...).................(......)........((.....((.....))....)).......)).)).............((....))....)..................))...........(((.......)))..((((........))))((((((.......(.((((((..((....))...)))))))..((((...((((((...((((((((((((.(((.....)))...((((.((((........))))))))..).))))))))))).((..... | GCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAAACCTGGCGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAGAACCAAAGCTAAGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCG... |
URS000007B7D3_9606 | 9,606 | Homo sapiens (human) piR-33481 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | CGGGACATATTCATGAGGCACTCTAGGGAC | |
URS000007B7EE_9606 | 9,606 | Homo sapiens (human) piR-59720 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TNGCCTCTGCACTTTCAGGATATTATCAGC | |
URS000007B8B8_9606 | 9,606 | Homo sapiens (human) pri-microRNA-194-2,-192 transcript | misc_RNA | SO:0000673 | ENA | (((((.((((......................................................................................................................................................................................................................................................................................................................... | ACTTCCTCCTTGTGCCCCGAAGGCCAGCCCGGCACTCAGAAGCTTTGGAGTCTCCCAAAATGCCTGCTGGGTCTCTGCAGGACTGGCACCTGTCACCGGAACCTGTCTGGGAGGGACGAGAACACGCTTTGCAAGAGGAAGCTCTGCCTCACAGAGCCCTGGGCTCACTCAGGGACCCTGGCCAGCAGCTGCTTCCTCTCCCCACAGCGGAGAGAGACCCAAGGGTCCCAGGGCGGATGCTTCCCACCAGGCCAGCCCAGCGTGCAGGGTGGCCTCGCAGCTCTGCTCACACTGTCCTGGCTGCTCTGAATCCCTGGGCC... |
URS000007B8C4_9606 | 9,606 | Homo sapiens (human) piR-56109 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGGGCAGATGGCCAAGGTGTGGGCTCCAGGCT | |
URS000007B95C_9606 | 9,606 | Homo sapiens (human) non-protein coding lnc-HIST2H3D-2:1 | lncRNA | SO:0001877 | GeneCards,LNCipedia | GTAATGAGTTGGCCCTCAGTCATCCCCGTCCAGTCTTACTGAGTTGCTTGTTATCTGTGCTACGAGATTCGAAAGGTTAATAGGACCCATCCTTTGGAAGTAGGAAAGTGGCATAGAAGGAGAAGCTGAGTTAGAGATCACTCACCCACTTGCCCATCAACTGGAACTGCAAGAGATCAGAGAATAAAGATATCAGTTGGTCCAAGGAAAATAATGAGGAAGAGAGAATTGGGGAGACAGAATTAATGTAGACTCTGAGGGATCAACTCAGATCTCTTGAGTTTCTATTTCTCTTTCTCAAAATCCAGTACTAACAGAAC... | |
URS000007B9E9_9606 | 9,606 | Homo sapiens (human) novel transcript | lncRNA | SO:0001904 | Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia | CTGGATGGTGCCTCTCAAACAAAAGTCCAATTCCCATGGGATGCCTTCTCCAAACAGCTATATTTCTAGCTTCTCTCCTTCCCCTTTTAGACCTAGGACTGCCAAAGCTTCCCTATTGCTGCTAGTCATGGAGTACTGCACTACCGCCTGTAGTTTCCCTTCACTCTATCCACGCATTTCATGAACTCTCTTCAAATTACTCCATATGGGTAGCCATCGACTTCTTACCAAGGCCCTGACTGAGACACTTTCATTCTTTTAAAAATATCCGAGTCAACTAATATATTAAAATAGACCAGCATCTCTTCTCAA | |
URS000007BA83_9606 | 9,606 | Homo sapiens (human) piR-57538 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGGTGTCCTGGGTGAACCTCATCTGC | |
URS000007BB27_9606 | 9,606 | Homo sapiens (human) piR-35186 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | GCAGCAGTTGAGGAGGCATTTCGTGGT | |
URS000007BBC2_9606 | 9,606 | Homo sapiens (human) piR-59970 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TTACTATTAATGTAAACTGCCTGGGAC | |
URS000007BC04_9606 | 9,606 | Homo sapiens (human) Small nucleolar RNA SNORD22 | snoRNA | SO:0000593 | ENA,Rfam | ((((....................................................................................................................)))). | TCCCAATGAAGAAACTTTCACATGTCTTACTCTCTGTCCTAGTCCCAGAGCCTGTAAAGGTGAACCACTGGGACTGGCTGGGGGAGAAGAGGAAGATTTGTTCCAGAAGGAACTGTCTGAGGGAT |
URS000007BC2E_9606 | 9,606 | Homo sapiens (human) piR-32111 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | CACAGAGGTGTGACGAGACTCGCGTGGGAA | |
URS000007BC79_9606 | 9,606 | Homo sapiens (human) piR-43488 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TCCCCACTGAGGTTTGATTTAAGATGGC | |
URS000007BC95_10090 | 10,090 | Mus musculus (house mouse) partial C/D box snoRNA; likely homolog to Homo sapiens U11; small non-messenger RNA (snmRNA) | snRNA | SO:0000398 | ENA | (((((((((((.....))))))))))).(((((((..........)))))))......................((((.(((((.((((...))))))))))))).... | ACGCAGGGCAACTCGATTGCTGTGCGTGCGGAATCGACATCAAGAGATTTCGGAAGCATAATTTTTTGGTAATTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTGT |
URS000007BCA0_9606 | 9,606 | Homo sapiens (human) novel transcript, antisense to SLC38A11 and SCN3A | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,NONCODE | GCCTGAATCAGAAACAGAAACTTCTAGACTGATGTGGTTCAGTGGTGCTTACATAGGCTATTGTTTACTACATCTGCACCAACCTTTCAGGAAGCATTTGGCTTGTACATTTAGCTCTGTGGCCCACTGAAGAGAATTTCCTGTGGGCAGTGGGGTGAGGAACCCTGCCTTAATCTGCTTCTCAGTCATCTGTGGACCACACCTACACCAGCGCTTCCTTCTGCGCATCCTATGGCACCTGTCTACTTCCTGTTTTGGGAATCCCCACAGAGGCTAGCACAGTGCTGAACTTGTAAAAATTCTGGAGGTTAGAAGTCCAA... | |
URS000007BCE3_9606 | 9,606 | Homo sapiens (human) piR-51192 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGCCAAACACCAACAAGCAAGATGGTT | |
URS000007BD46_9606 | 9,606 | Homo sapiens (human) piR-30725 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | ACGGTGTGGAAACTGCGACACTCACGC | |
URS000007BD67_9606 | 9,606 | Homo sapiens (human) DNMT3L antisense RNA 1 | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook | CAGGAAGCGAGATGCGACGTCCAGGTCTTCCTTGTTCAGCACCAGATTGTCCACGAACATCCAGAAGAAGGGCCTGGGGCTGCCTGGCTTGGGCCGTGCGTACTGCAGGAGCCGGTGGAACTGGAACAGCAGCAATGAAGCCCTGCCCAGTGCTGGGGCCACAGAGGTGCATGGACCCCTCCTCCCCCAGGCAGGCCTAGAGTGGGGAAGAGACAGACAGGCAACCCCGAGGGAGGAGCTGACGCAGAGCGCGTGCCGCGGCACAAATACCGCCTTTTAGAGGAAGCTCCAGAGGACACGTGAGCTGCAGTGATGTGGGC... | |
URS000007BDF8_9606 | 9,606 | Homo sapiens (human) piR-43762 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TCCCTGGGCTAAAGGTCGATGGAATGGAT | |
URS000007BE53_9606 | 9,606 | Homo sapiens (human) piR-38097 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TACATGTGACCAAAGTGCTGTTAGGA | |
URS000007BE61_9606 | 9,606 | Homo sapiens (human) novel transcript, antisense to SSH2 | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE | ACAAGCTGTAATCAATCAGCTGGGTATAAGATGGGGTTTTCACCCTTTCCAAGCTGCATGAGCTCCAGCCACCCCTAGGAGGAGACAACATATCACGCATCTCAAGACCTGGAGGGAGAATGGCAAGCAGCTGATTCATCTCCATTGCCTGTGAAACACTGCTACTCCACGTGTCACTTCTCACTCAGGGGTCCCCTCCTCACTCCTCCCTACTCAAGGGTAACCTCCATCCTGAATTTTGTGCTTATCATTCCCTTTTTTTTTCTTTAT | |
URS000007BE64_9606 | 9,606 | Homo sapiens (human) hsa-miR-4711-3p | miRNA | SO:0000276 | ENA,GeneCards,MalaCards,miRBase,RefSeq | CGTGTCTTCTGGCTTGAT | |
URS000007BEB1_9606 | 9,606 | Homo sapiens (human) CNOT10 antisense RNA 1 | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE | GAAGGTGGAGCTGGAATGAATTTATCTCCATCATGGCTTTTACTGCTAAAATAGAGGCCATGAAAACTGATCCAAATGGCTAGATACGAAGATGCAACAGATGAAAACAAACTGGCCCACGATGGAATGGAACTAAAAAACGTAGAATAATAATCCATACCTTCAAGCACCGATAGCCAGAAAGTGTGCCAGATAAGTTTTAAGGTAAAAGGATCATACATAATTAAAATATTGGGACTATTTTTGTTTAGCAGATCTTTTCCCATATTTATACACTGCCCAGGTAAATATAAGCCTTGCCTCTGCCAAGTCTGAAATAA... | |
URS000007BEBD_9606 | 9,606 | Homo sapiens (human) novel transcript | lncRNA | SO:0001904 | ENA,Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia | GAGAAACCTGGAGGGAGACCCCCAAAACTTCTCAGTTCGCCGACCCCTTGGTCCCAGAGGGAGAGGAGCATCCCCAAAGAACATTCAAGTCTGAGCCTCAAGGAGCCTCTGCGACTCGGTGTCTAGATCCAGGAAATGGAGAATGAGCCGTGACTTTGGATGCTTCACTCTTGTCCATCAGGCTCGGAATTGGTGAGCATCTCCCACATTACCGTCTCCAACGGAACAAGGTGCCCCATTGGACATTTCCTCTGCATGGACCAGCCATTCTCCAAATCTGCCCCCATGTCACCCCAGCTCCCCATCGCAGTCACTTCTCA... | |
URS000007BECE_9606 | 9,606 | Homo sapiens (human) long intergenic non-protein coding RNA 408 | lncRNA | SO:0001904 | Ensembl,Ensembl/GENCODE,Expression Atlas,GeneCards,LncBook,LNCipedia,NONCODE | GCTTAGAGAACAGGAAGTGGGAGCCACATACCCCGAGCTGGCGGCTTGAGCCTGTGGTATCTAGGCTCACCTCACTGCGGTTGGTGGAGGTGATGGAGGTTGCAGCTTGGCCAGCATGGTAGAAAGGTGGCAGGGTAGACTCTAGATTCTAGAGGGCAACCTCTGTTTGCTCATGCTGGAGCGTGGCAGGTGCACAATGTTTCCTTGGGAATCCTCAGCAGGGCACGTCTGGCTTTTACCACCCAGTTGCTTCGAGCCAGGAGATGGAGGAGTCATCTGTTGCACGCTGGAGGCTGGAGCCTGCAGATGGCATGGTTCTG... | |
URS000007BEE7_9606 | 9,606 | Homo sapiens (human) partial ncRNA | snRNA | SO:0000274 | ENA | AGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAGAGAGCCGAGATCACTCCATTGCACTCCAGCCTGGGCAACAGAG | |
URS000007BF96_9606 | 9,606 | Homo sapiens (human) piR-35048 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | GCAAGCCTTAACGTATTCAGAGTAAT | |
URS000007C1BF_9606 | 9,606 | Homo sapiens (human) piR-52570 | piRNA | SO:0001035 | ENA,GeneCards,PirBase | TGCTAAGCTACGTGGTGCAGGTTGCAGC |
Subsets and Splits
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