Unnamed: 0 int64 0 64.8k | seqname stringlengths 4 10 | source stringclasses 2
values | feature stringclasses 1
value | start int64 1 249M | end int64 107 249M | score float64 8 205k | strand stringclasses 2
values | frame int64 0 0 | gene_id stringlengths 17 24 | gene_type stringlengths 3 34 | gene_name stringlengths 2 25 | level int64 1 3 | havana_gene stringlengths 20 22 ⌀ | tag stringclasses 25
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
64,800 | chrY | HAVANA | gene | 25,918,323 | 25,918,895 | 573 | - | 0 | ENSG00000223655.1 | processed_pseudogene | RAB9AP3 | 2 | OTTHUMG00000045262.1 | null |
64,801 | chrY | ENSEMBL | gene | 25,928,979 | 25,929,142 | 164 | + | 0 | ENSG00000252625.1 | snRNA | RNU1-40P | 3 | null | null |
64,802 | chrY | HAVANA | gene | 25,923,388 | 25,929,826 | 558 | + | 0 | ENSG00000230854.1 | unprocessed_pseudogene | USP9YP20 | 2 | OTTHUMG00000045263.1 | null |
64,803 | chrY | HAVANA | gene | 25,933,833 | 25,935,881 | 432 | - | 0 | ENSG00000227635.1 | unprocessed_pseudogene | USP9YP21 | 2 | OTTHUMG00000045265.1 | null |
64,804 | chrY | HAVANA | gene | 25,943,268 | 25,954,152 | 1,116 | + | 0 | ENSG00000237546.1 | unprocessed_pseudogene | XKRYP6 | 1 | OTTHUMG00000045267.1 | pseudo_consens |
64,805 | chrY | HAVANA | gene | 25,975,549 | 25,988,069 | 444 | + | 0 | ENSG00000172283.10 | unprocessed_pseudogene | PRYP4 | 2 | OTTHUMG00000045269.2 | null |
64,806 | chrY | HAVANA | gene | 25,991,241 | 25,991,572 | 332 | - | 0 | ENSG00000227867.1 | processed_pseudogene | ELOCP11 | 1 | OTTHUMG00000045271.1 | pseudo_consens |
64,807 | chrY | HAVANA | gene | 25,994,684 | 25,995,697 | 1,014 | - | 0 | ENSG00000231716.1 | unprocessed_pseudogene | CDY23P | 1 | OTTHUMG00000045273.1 | pseudo_consens |
64,808 | chrY | HAVANA | gene | 26,002,254 | 26,008,856 | 661 | + | 0 | ENSG00000234744.1 | unprocessed_pseudogene | USP9YP26 | 2 | OTTHUMG00000045275.1 | null |
64,809 | chrY | HAVANA | gene | 26,011,435 | 26,012,237 | 318 | + | 0 | ENSG00000233156.1 | unprocessed_pseudogene | HSFY8P | 1 | OTTHUMG00000045277.1 | pseudo_consens |
64,810 | chrY | HAVANA | gene | 26,055,779 | 26,088,493 | 1,392 | - | 0 | ENSG00000234888.1 | unprocessed_pseudogene | OFD1P15Y | 2 | OTTHUMG00000045278.1 | null |
64,811 | chrY | HAVANA | gene | 26,123,674 | 26,133,308 | 1,157 | + | 0 | ENSG00000215507.10 | transcribed_processed_pseudogene | RBMY2DP | 2 | OTTHUMG00000045283.2 | null |
64,812 | chrY | HAVANA | gene | 26,198,331 | 26,208,148 | 200 | - | 0 | ENSG00000235014.1 | unprocessed_pseudogene | REREP2Y | 2 | OTTHUMG00000046126.1 | null |
64,813 | chrY | HAVANA | gene | 26,244,351 | 26,244,573 | 223 | - | 0 | ENSG00000225876.1 | unprocessed_pseudogene | AC024067.1 | 2 | OTTHUMG00000036763.1 | null |
64,814 | chrY | ENSEMBL | gene | 26,247,384 | 26,247,521 | 138 | + | 0 | ENSG00000251796.1 | snoRNA | RF00156 | 3 | null | null |
64,815 | chrY | HAVANA | gene | 26,277,923 | 26,354,418 | 1,671 | - | 0 | ENSG00000229238.3 | unprocessed_pseudogene | PPP1R12BP1 | 2 | OTTHUMG00000036764.2 | null |
64,816 | chrY | ENSEMBL | gene | 26,360,989 | 26,361,092 | 104 | + | 0 | ENSG00000252948.1 | snRNA | RNU6-1314P | 3 | null | null |
64,817 | chrY | HAVANA | gene | 26,400,611 | 26,401,230 | 323 | + | 0 | ENSG00000233843.1 | processed_pseudogene | CYCSP48 | 1 | OTTHUMG00000036766.1 | pseudo_consens |
64,818 | chrY | HAVANA | gene | 26,409,815 | 26,420,535 | 659 | + | 0 | ENSG00000188399.5 | unprocessed_pseudogene | ANKRD36P1 | 2 | OTTHUMG00000036761.1 | null |
64,819 | chrY | HAVANA | gene | 26,453,982 | 26,454,092 | 111 | + | 0 | ENSG00000277146.1 | processed_pseudogene | AC013734.1 | 2 | OTTHUMG00000188106.1 | null |
64,820 | chrY | HAVANA | gene | 26,549,425 | 26,549,743 | 319 | + | 0 | ENSG00000224240.1 | processed_pseudogene | CYCSP49 | 1 | OTTHUMG00000036760.1 | pseudo_consens,overlapping_locus |
64,821 | chrY | HAVANA | gene | 26,508,213 | 26,579,690 | 1,605 | + | 0 | ENSG00000215506.5 | unprocessed_pseudogene | TPTE2P4 | 1 | OTTHUMG00000036765.1 | pseudo_consens,overlapping_locus |
64,822 | chrY | HAVANA | gene | 26,586,642 | 26,591,601 | 342 | - | 0 | ENSG00000227629.1 | unprocessed_pseudogene | SLC25A15P1 | 2 | OTTHUMG00000036811.1 | null |
64,823 | chrY | HAVANA | gene | 26,626,520 | 26,627,159 | 640 | - | 0 | ENSG00000231514.1 | processed_pseudogene | CCNQP2 | 1 | OTTHUMG00000036813.1 | pseudo_consens,overlapping_locus |
64,824 | chrY | HAVANA | gene | 26,594,851 | 26,634,652 | 2,337 | - | 0 | ENSG00000237917.1 | unprocessed_pseudogene | PARP4P1 | 1 | OTTHUMG00000036812.1 | pseudo_consens,overlapping_locus |
64,825 | chrY | HAVANA | gene | 56,855,244 | 56,855,488 | 245 | + | 0 | ENSG00000235857.1 | processed_pseudogene | CTBP2P1 | 1 | OTTHUMG00000036770.1 | pseudo_consens |
64,826 | chrY | HAVANA | gene | 56,954,332 | 56,968,979 | 9,019 | + | 0 | ENSG00000168939.11_PAR_Y | protein_coding | SPRY3 | 2 | OTTHUMG00000022675.3 | PAR |
64,827 | chrY | HAVANA | gene | 57,015,105 | 57,016,096 | 992 | - | 0 | ENSG00000237801.6_PAR_Y | processed_pseudogene | AMD1P2 | 1 | OTTHUMG00000022673.2 | pseudo_consens,PAR |
64,828 | chrY | HAVANA | gene | 57,062,156 | 57,062,405 | 250 | + | 0 | ENSG00000237040.6_PAR_Y | processed_pseudogene | DPH3P2 | 1 | OTTHUMG00000022680.1 | pseudo_consens,PAR |
64,829 | chrY | HAVANA | gene | 57,067,813 | 57,130,289 | 2,667 | + | 0 | ENSG00000124333.15_PAR_Y | protein_coding | VAMP7 | 2 | OTTHUMG00000022679.2 | PAR |
64,830 | chrY | HAVANA | gene | 57,165,512 | 57,165,845 | 334 | - | 0 | ENSG00000228410.6_PAR_Y | processed_pseudogene | ELOCP24 | 1 | OTTHUMG00000040493.1 | pseudo_consens,PAR |
64,831 | chrY | HAVANA | gene | 57,171,890 | 57,172,769 | 880 | - | 0 | ENSG00000223484.7_PAR_Y | processed_pseudogene | TRPC6P | 1 | OTTHUMG00000022681.1 | pseudo_consens,PAR |
64,832 | chrY | HAVANA | gene | 57,184,101 | 57,197,337 | 2,504 | + | 0 | ENSG00000124334.17_PAR_Y | protein_coding | IL9R | 2 | OTTHUMG00000022720.1 | overlapping_locus,PAR |
64,833 | chrY | HAVANA | gene | 57,201,143 | 57,203,357 | 1,054 | - | 0 | ENSG00000185203.12_PAR_Y | antisense | WASIR1 | 2 | OTTHUMG00000022676.3 | PAR |
64,834 | chrY | HAVANA | gene | 57,190,738 | 57,208,756 | 773 | + | 0 | ENSG00000270726.6_PAR_Y | processed_transcript | AJ271736.1 | 2 | OTTHUMG00000184987.2 | overlapping_locus,PAR |
64,835 | chrY | HAVANA | gene | 57,207,346 | 57,212,230 | 4,618 | + | 0 | ENSG00000182484.15_PAR_Y | transcribed_unprocessed_pseudogene | WASH6P | 2 | OTTHUMG00000022677.5 | overlapping_locus,PAR |
64,836 | chrY | HAVANA | gene | 57,212,184 | 57,214,397 | 1,306 | - | 0 | ENSG00000227159.8_PAR_Y | unprocessed_pseudogene | DDX11L16 | 2 | OTTHUMG00000022678.1 | PAR |
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