Datasets:
Size:
10M - 100M
sequence_key large_string | sequence_id large_string | source large_string | variant_id large_string | allele large_string | cell_type large_string | log2fc float64 | standard_error float64 | neg_log10_bonferroni_padj float64 | active bool | mean_dna_count float64 | mean_rna_count float64 | allelic_log2fc float64 | allelic_standard_error float64 | allelic_fdr_source float64 | emvar bool | is_observed bool | passes_source_qc bool | activity_id large_string | pair_id large_string | variant_1 large_string | variant_2 large_string | distance int64 | center_variant large_string | window large_string | diplotype large_string | interaction_emvar bool | adjusted_p_value float64 | allelic_p_value float64 | allelic_fdr float64 | posterior_allelic_log2fc float64 | posterior_log2fc float64 | baseline_log2fc float64 | baseline_standard_error float64 | variant_1_emvar bool | variant_2_emvar bool | emvar_variant_id large_string | model_prediction float64 | MinGap float64 | sequence large_string | sequence_length uint32 | fold large_string | training_example_id large_string |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
initial_variant|chr1:14677:G:A|reference | chr1:14677:G:A|reference | initial_variant | chr1:14677:G:A | reference | K562 | -0.704147 | 1.089462 | 0 | false | 227.2 | 73.166667 | 0.671383 | 0.483115 | 0.304589 | false | true | true | initial_variant|chr1:14677:G:A|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGTGCTGGTTCCGTCACCCCCTCCCAAGGAAGTAGGTCTGAGCAGCTTGTCCTGGCTGTGTCCATGTCAGAGCAACGGCCCAAGTCTGGGTCTGGGGGGGAAGGTGTCATGGAGCCCCCTACGATTCCCAGTCGTCCTCGTCCTCCTCTGCCTGTGGCTGCTGCGGTGGCGGCAGAGGAGGGATGGAGTCTGACACGCGG | 200 | heldout | initial_variant|chr1:14677:G:A|reference|K562 |
initial_variant|chr1:14677:G:A|reference | chr1:14677:G:A|reference | initial_variant | chr1:14677:G:A | reference | HepG2 | 0.667516 | 0.15201 | 0 | false | 152.8 | 220.8 | -0.309834 | 0.365906 | 0.133847 | false | true | true | initial_variant|chr1:14677:G:A|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGTGCTGGTTCCGTCACCCCCTCCCAAGGAAGTAGGTCTGAGCAGCTTGTCCTGGCTGTGTCCATGTCAGAGCAACGGCCCAAGTCTGGGTCTGGGGGGGAAGGTGTCATGGAGCCCCCTACGATTCCCAGTCGTCCTCGTCCTCCTCTGCCTGTGGCTGCTGCGGTGGCGGCAGAGGAGGGATGGAGTCTGACACGCGG | 200 | heldout | initial_variant|chr1:14677:G:A|reference|HepG2 |
initial_variant|chr1:14677:G:A|reference | chr1:14677:G:A|reference | initial_variant | chr1:14677:G:A | reference | SKNSH | 0.538641 | 0.222587 | 0 | false | 157 | 162.2 | -0.183476 | 0.404736 | 0.058162 | false | true | true | initial_variant|chr1:14677:G:A|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGTGCTGGTTCCGTCACCCCCTCCCAAGGAAGTAGGTCTGAGCAGCTTGTCCTGGCTGTGTCCATGTCAGAGCAACGGCCCAAGTCTGGGTCTGGGGGGGAAGGTGTCATGGAGCCCCCTACGATTCCCAGTCGTCCTCGTCCTCCTCTGCCTGTGGCTGCTGCGGTGGCGGCAGAGGAGGGATGGAGTCTGACACGCGG | 200 | heldout | initial_variant|chr1:14677:G:A|reference|SKNSH |
initial_variant|chr1:14677:G:A|reference | chr1:14677:G:A|reference | initial_variant | chr1:14677:G:A | reference | HCT116 | 0.159069 | 0.292385 | 0 | false | 152.8 | 148.4 | -0.431854 | 0.465651 | 0.127019 | false | true | true | initial_variant|chr1:14677:G:A|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGTGCTGGTTCCGTCACCCCCTCCCAAGGAAGTAGGTCTGAGCAGCTTGTCCTGGCTGTGTCCATGTCAGAGCAACGGCCCAAGTCTGGGTCTGGGGGGGAAGGTGTCATGGAGCCCCCTACGATTCCCAGTCGTCCTCGTCCTCCTCTGCCTGTGGCTGCTGCGGTGGCGGCAGAGGAGGGATGGAGTCTGACACGCGG | 200 | heldout | initial_variant|chr1:14677:G:A|reference|HCT116 |
initial_variant|chr1:522224:G:A|reference | chr1:522224:G:A|reference | initial_variant | chr1:522224:G:A | reference | K562 | 0.200635 | 0.161198 | 0 | false | 1,212.8 | 668.833333 | -0.357472 | 0.162531 | 0.732971 | false | true | true | initial_variant|chr1:522224:G:A|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCTGTGGTTCTCTGTTCTTTTCTCAGGTGTGTCCTTAACCTTGCAAATAGATTTCTTGAAATGATTGACACTCACCTTGGTTGTGTTCTTTGATCAGCGCCTGTGACGCAGCTTCAGGAGGTCCTGAGAACGTGTGCACAGTTTAGTCGGCAGAAACTTAGGGAAACGTAAGACCACCATCAGTACGTAGGAGTTGTGC | 200 | heldout | initial_variant|chr1:522224:G:A|reference|K562 |
initial_variant|chr1:522224:G:A|reference | chr1:522224:G:A|reference | initial_variant | chr1:522224:G:A | reference | HepG2 | 0.627627 | 0.051736 | 28.058679 | false | 1,232 | 1,736.2 | -0.31519 | 0.131337 | 0.875467 | false | true | true | initial_variant|chr1:522224:G:A|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCTGTGGTTCTCTGTTCTTTTCTCAGGTGTGTCCTTAACCTTGCAAATAGATTTCTTGAAATGATTGACACTCACCTTGGTTGTGTTCTTTGATCAGCGCCTGTGACGCAGCTTCAGGAGGTCCTGAGAACGTGTGCACAGTTTAGTCGGCAGAAACTTAGGGAAACGTAAGACCACCATCAGTACGTAGGAGTTGTGC | 200 | heldout | initial_variant|chr1:522224:G:A|reference|HepG2 |
initial_variant|chr1:522224:G:A|reference | chr1:522224:G:A|reference | initial_variant | chr1:522224:G:A | reference | SKNSH | -0.088036 | 0.131447 | 0 | false | 1,042.8 | 693.4 | -0.148268 | 0.18182 | 0.130444 | false | true | true | initial_variant|chr1:522224:G:A|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCTGTGGTTCTCTGTTCTTTTCTCAGGTGTGTCCTTAACCTTGCAAATAGATTTCTTGAAATGATTGACACTCACCTTGGTTGTGTTCTTTGATCAGCGCCTGTGACGCAGCTTCAGGAGGTCCTGAGAACGTGTGCACAGTTTAGTCGGCAGAAACTTAGGGAAACGTAAGACCACCATCAGTACGTAGGAGTTGTGC | 200 | heldout | initial_variant|chr1:522224:G:A|reference|SKNSH |
initial_variant|chr1:522224:G:A|reference | chr1:522224:G:A|reference | initial_variant | chr1:522224:G:A | reference | HCT116 | 0.7717 | 0.076422 | 18.164093 | false | 1,232 | 1,776.2 | -0.198617 | 0.159131 | 0.207172 | false | true | true | initial_variant|chr1:522224:G:A|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCTGTGGTTCTCTGTTCTTTTCTCAGGTGTGTCCTTAACCTTGCAAATAGATTTCTTGAAATGATTGACACTCACCTTGGTTGTGTTCTTTGATCAGCGCCTGTGACGCAGCTTCAGGAGGTCCTGAGAACGTGTGCACAGTTTAGTCGGCAGAAACTTAGGGAAACGTAAGACCACCATCAGTACGTAGGAGTTGTGC | 200 | heldout | initial_variant|chr1:522224:G:A|reference|HCT116 |
initial_variant|chr1:729679:C:G|reference | chr1:729679:C:G|reference | initial_variant | chr1:729679:C:G | reference | K562 | -0.051526 | 0.316094 | 0 | false | 350.2 | 163.833333 | -0.74206 | 0.285371 | 1.049232 | false | true | true | initial_variant|chr1:729679:C:G|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCATGCAGTGATGGTCACCTTCTCTAACAGGCATTTCAGAGTGAGGTGGGACGTTCTAGGGCACCTGTTTTGCAGATGCCCTCAGGGTGGGGGAAGGGCAGCTTCCAGCCTTCCCAGTTCCAGCACTCTCTCCCCCAGCCGCTACCTGCATGTGAATCCCTGGGAGACCCCACAGCCCATGTCTCTGAGTAAAACTGGA | 200 | heldout | initial_variant|chr1:729679:C:G|reference|K562 |
initial_variant|chr1:729679:C:G|reference | chr1:729679:C:G|reference | initial_variant | chr1:729679:C:G | reference | HepG2 | 0.273272 | 0.197412 | 0 | false | 297.8 | 222.6 | -0.188366 | 0.195394 | 0.1712 | false | true | true | initial_variant|chr1:729679:C:G|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCATGCAGTGATGGTCACCTTCTCTAACAGGCATTTCAGAGTGAGGTGGGACGTTCTAGGGCACCTGTTTTGCAGATGCCCTCAGGGTGGGGGAAGGGCAGCTTCCAGCCTTCCCAGTTCCAGCACTCTCTCCCCCAGCCGCTACCTGCATGTGAATCCCTGGGAGACCCCACAGCCCATGTCTCTGAGTAAAACTGGA | 200 | heldout | initial_variant|chr1:729679:C:G|reference|HepG2 |
initial_variant|chr1:729679:C:G|reference | chr1:729679:C:G|reference | initial_variant | chr1:729679:C:G | reference | SKNSH | -0.331275 | 0.441817 | 0 | false | 297.8 | 110.4 | -0.110994 | 0.34312 | 0.039609 | false | true | true | initial_variant|chr1:729679:C:G|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCATGCAGTGATGGTCACCTTCTCTAACAGGCATTTCAGAGTGAGGTGGGACGTTCTAGGGCACCTGTTTTGCAGATGCCCTCAGGGTGGGGGAAGGGCAGCTTCCAGCCTTCCCAGTTCCAGCACTCTCTCCCCCAGCCGCTACCTGCATGTGAATCCCTGGGAGACCCCACAGCCCATGTCTCTGAGTAAAACTGGA | 200 | heldout | initial_variant|chr1:729679:C:G|reference|SKNSH |
initial_variant|chr1:729679:C:G|reference | chr1:729679:C:G|reference | initial_variant | chr1:729679:C:G | reference | HCT116 | -0.340771 | 0.250307 | 0 | false | 297.8 | 190.6 | -0.244229 | 0.250775 | 0.141143 | false | true | true | initial_variant|chr1:729679:C:G|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCATGCAGTGATGGTCACCTTCTCTAACAGGCATTTCAGAGTGAGGTGGGACGTTCTAGGGCACCTGTTTTGCAGATGCCCTCAGGGTGGGGGAAGGGCAGCTTCCAGCCTTCCCAGTTCCAGCACTCTCTCCCCCAGCCGCTACCTGCATGTGAATCCCTGGGAGACCCCACAGCCCATGTCTCTGAGTAAAACTGGA | 200 | heldout | initial_variant|chr1:729679:C:G|reference|HCT116 |
initial_variant|chr1:741397:A:G|reference | chr1:741397:A:G|reference | initial_variant | chr1:741397:A:G | reference | K562 | 0.057421 | 0.227195 | 0 | false | 377.4 | 189 | -0.042992 | 0.266853 | 0.016981 | false | true | true | initial_variant|chr1:741397:A:G|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTAGTCAATTAGCCAAAAAGAATTGGCAGTTAATGTCAATTAATTGTGCGATTAAAAAAATTTTTGGCAAAGGACAATTTGTTTTTATTTTGAAGACTGATTTTAGATTTAGATGAGAGTATAGTAAAATTGTAGCAATGCTAATAATTTAAGCTGTTTATGTATACCTGAGACACCATTAACTGACATTTTTTACAACC | 200 | fold5 | initial_variant|chr1:741397:A:G|reference|K562 |
initial_variant|chr1:741397:A:G|reference | chr1:741397:A:G|reference | initial_variant | chr1:741397:A:G | reference | HepG2 | -0.114727 | 0.172813 | 0 | false | 542.6 | 320.6 | 0.167495 | 0.210426 | 0.127992 | false | true | true | initial_variant|chr1:741397:A:G|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTAGTCAATTAGCCAAAAAGAATTGGCAGTTAATGTCAATTAATTGTGCGATTAAAAAAATTTTTGGCAAAGGACAATTTGTTTTTATTTTGAAGACTGATTTTAGATTTAGATGAGAGTATAGTAAAATTGTAGCAATGCTAATAATTTAAGCTGTTTATGTATACCTGAGACACCATTAACTGACATTTTTTACAACC | 200 | fold5 | initial_variant|chr1:741397:A:G|reference|HepG2 |
initial_variant|chr1:741397:A:G|reference | chr1:741397:A:G|reference | initial_variant | chr1:741397:A:G | reference | SKNSH | -0.474388 | 0.330198 | 0 | false | 542.6 | 189.6 | 0.535512 | 0.247971 | 0.720276 | false | true | true | initial_variant|chr1:741397:A:G|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTAGTCAATTAGCCAAAAAGAATTGGCAGTTAATGTCAATTAATTGTGCGATTAAAAAAATTTTTGGCAAAGGACAATTTGTTTTTATTTTGAAGACTGATTTTAGATTTAGATGAGAGTATAGTAAAATTGTAGCAATGCTAATAATTTAAGCTGTTTATGTATACCTGAGACACCATTAACTGACATTTTTTACAACC | 200 | fold5 | initial_variant|chr1:741397:A:G|reference|SKNSH |
initial_variant|chr1:741397:A:G|reference | chr1:741397:A:G|reference | initial_variant | chr1:741397:A:G | reference | HCT116 | 0.402556 | 0.157757 | 0 | false | 542.6 | 567 | -0.130261 | 0.237843 | 0.062032 | false | true | true | initial_variant|chr1:741397:A:G|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTAGTCAATTAGCCAAAAAGAATTGGCAGTTAATGTCAATTAATTGTGCGATTAAAAAAATTTTTGGCAAAGGACAATTTGTTTTTATTTTGAAGACTGATTTTAGATTTAGATGAGAGTATAGTAAAATTGTAGCAATGCTAATAATTTAAGCTGTTTATGTATACCTGAGACACCATTAACTGACATTTTTTACAACC | 200 | fold5 | initial_variant|chr1:741397:A:G|reference|HCT116 |
initial_variant|chr1:752566:G:A|reference | chr1:752566:G:A|reference | initial_variant | chr1:752566:G:A | reference | K562 | -0.140224 | 0.135632 | 0 | false | 1,583.2 | 695.833333 | 0.02199 | 0.157997 | 0.01429 | false | true | true | initial_variant|chr1:752566:G:A|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AAAGAATTTTTGGCTAAGTTCCCAAAAACGATTGCAACAAAACAAAATTGGCAAGTAGAATTTAACTAAATGAAAGAGCTTCTGCACAGCAAGAGAAACGTTTGACAGAGAATACAGACAACCTACTGAATGAGAGAAACTATTTGCAAACTATGCATCTGACAAAGGCCTAATATCCAGAATCTACAGGGAACTTATGC | 200 | fold5 | initial_variant|chr1:752566:G:A|reference|K562 |
initial_variant|chr1:752566:G:A|reference | chr1:752566:G:A|reference | initial_variant | chr1:752566:G:A | reference | HepG2 | -0.067281 | 0.054344 | 0 | false | 2,022.2 | 1,762.4 | -0.084617 | 0.097529 | 0.138849 | false | true | true | initial_variant|chr1:752566:G:A|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AAAGAATTTTTGGCTAAGTTCCCAAAAACGATTGCAACAAAACAAAATTGGCAAGTAGAATTTAACTAAATGAAAGAGCTTCTGCACAGCAAGAGAAACGTTTGACAGAGAATACAGACAACCTACTGAATGAGAGAAACTATTTGCAAACTATGCATCTGACAAAGGCCTAATATCCAGAATCTACAGGGAACTTATGC | 200 | fold5 | initial_variant|chr1:752566:G:A|reference|HepG2 |
initial_variant|chr1:752566:G:A|reference | chr1:752566:G:A|reference | initial_variant | chr1:752566:G:A | reference | SKNSH | 0.091286 | 0.086938 | 0 | false | 1,509.4 | 1,147 | 0.000972 | 0.131796 | 0.000745 | false | true | true | initial_variant|chr1:752566:G:A|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AAAGAATTTTTGGCTAAGTTCCCAAAAACGATTGCAACAAAACAAAATTGGCAAGTAGAATTTAACTAAATGAAAGAGCTTCTGCACAGCAAGAGAAACGTTTGACAGAGAATACAGACAACCTACTGAATGAGAGAAACTATTTGCAAACTATGCATCTGACAAAGGCCTAATATCCAGAATCTACAGGGAACTTATGC | 200 | fold5 | initial_variant|chr1:752566:G:A|reference|SKNSH |
initial_variant|chr1:752566:G:A|reference | chr1:752566:G:A|reference | initial_variant | chr1:752566:G:A | reference | HCT116 | -0.329839 | 0.090451 | 0 | false | 2,022.2 | 1,359.4 | 0.178631 | 0.136254 | 0.226027 | false | true | true | initial_variant|chr1:752566:G:A|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AAAGAATTTTTGGCTAAGTTCCCAAAAACGATTGCAACAAAACAAAATTGGCAAGTAGAATTTAACTAAATGAAAGAGCTTCTGCACAGCAAGAGAAACGTTTGACAGAGAATACAGACAACCTACTGAATGAGAGAAACTATTTGCAAACTATGCATCTGACAAAGGCCTAATATCCAGAATCTACAGGGAACTTATGC | 200 | fold5 | initial_variant|chr1:752566:G:A|reference|HCT116 |
initial_variant|chr1:752721:A:G|reference | chr1:752721:A:G|reference | initial_variant | chr1:752721:A:G | reference | K562 | 0.156938 | 0.244599 | 0 | false | 478 | 265.166667 | -0.201121 | 0.291508 | 0.101629 | false | true | true | initial_variant|chr1:752721:A:G|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CATCTGACAAAGGCCTAATATCCAGAATCTACAGGGAACTTATGCAAAAAACGTTCACTTTCTGTCTGTGTTCACGTCACCAAGAGAATAGAAAGGAAAAGGGAAGAATGCAAAAGTCAAAGACACGTCACCCTCCTTGAGACAGCCCTCCAGTCCAGGCCAAATCTCAGCCTGCCCTTGGTCCGCTGTGGTTGGGCCTG | 200 | fold5 | initial_variant|chr1:752721:A:G|reference|K562 |
initial_variant|chr1:752721:A:G|reference | chr1:752721:A:G|reference | initial_variant | chr1:752721:A:G | reference | HepG2 | 1.018395 | 0.071128 | 40.687249 | true | 527.8 | 972.8 | -0.076477 | 0.17758 | 0.05323 | false | true | true | initial_variant|chr1:752721:A:G|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CATCTGACAAAGGCCTAATATCCAGAATCTACAGGGAACTTATGCAAAAAACGTTCACTTTCTGTCTGTGTTCACGTCACCAAGAGAATAGAAAGGAAAAGGGAAGAATGCAAAAGTCAAAGACACGTCACCCTCCTTGAGACAGCCCTCCAGTCCAGGCCAAATCTCAGCCTGCCCTTGGTCCGCTGTGGTTGGGCCTG | 200 | fold5 | initial_variant|chr1:752721:A:G|reference|HepG2 |
initial_variant|chr1:752721:A:G|reference | chr1:752721:A:G|reference | initial_variant | chr1:752721:A:G | reference | SKNSH | 3.286171 | 0.092887 | 302.195773 | true | 399.8 | 2,825 | 0.044535 | 0.111793 | 0.049604 | false | true | true | initial_variant|chr1:752721:A:G|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CATCTGACAAAGGCCTAATATCCAGAATCTACAGGGAACTTATGCAAAAAACGTTCACTTTCTGTCTGTGTTCACGTCACCAAGAGAATAGAAAGGAAAAGGGAAGAATGCAAAAGTCAAAGACACGTCACCCTCCTTGAGACAGCCCTCCAGTCCAGGCCAAATCTCAGCCTGCCCTTGGTCCGCTGTGGTTGGGCCTG | 200 | fold5 | initial_variant|chr1:752721:A:G|reference|SKNSH |
initial_variant|chr1:752721:A:G|reference | chr1:752721:A:G|reference | initial_variant | chr1:752721:A:G | reference | HCT116 | 1.450665 | 0.100695 | 59.013469 | true | 527.8 | 1,228.6 | 0.264566 | 0.201237 | 0.226934 | false | true | true | initial_variant|chr1:752721:A:G|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CATCTGACAAAGGCCTAATATCCAGAATCTACAGGGAACTTATGCAAAAAACGTTCACTTTCTGTCTGTGTTCACGTCACCAAGAGAATAGAAAGGAAAAGGGAAGAATGCAAAAGTCAAAGACACGTCACCCTCCTTGAGACAGCCCTCCAGTCCAGGCCAAATCTCAGCCTGCCCTTGGTCCGCTGTGGTTGGGCCTG | 200 | fold5 | initial_variant|chr1:752721:A:G|reference|HCT116 |
initial_variant|chr1:752894:T:C|reference | chr1:752894:T:C|reference | initial_variant | chr1:752894:T:C | reference | K562 | 1.672831 | 0.090744 | 69.769338 | true | 971.6 | 1,509.166667 | -0.437789 | 0.160826 | 1.16051 | true | true | true | initial_variant|chr1:752894:T:C|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GCCCTTGGTCCGCTGTGGTTGGGCCTGCACCCAAGCCATGAGCACACGCAGCAATTGTGGCAGCAGAAGCTTCCTCTGGGCTCAGACTCAGGCTGATGCTGCGTCAGGACCTGCCGCGGTCTCGGCTGGGCTTCCTGGGACTCGGTGGTTGTGGGCTGATTGTAAAGCACGGAATGACTCTTAGAAACTGGGCGTCATTC | 200 | fold5 | initial_variant|chr1:752894:T:C|reference|K562 |
initial_variant|chr1:752894:T:C|reference | chr1:752894:T:C|reference | initial_variant | chr1:752894:T:C | reference | HepG2 | 1.208988 | 0.055219 | 100.448778 | true | 960 | 2,034 | -0.223657 | 0.120936 | 0.511896 | false | true | true | initial_variant|chr1:752894:T:C|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GCCCTTGGTCCGCTGTGGTTGGGCCTGCACCCAAGCCATGAGCACACGCAGCAATTGTGGCAGCAGAAGCTTCCTCTGGGCTCAGACTCAGGCTGATGCTGCGTCAGGACCTGCCGCGGTCTCGGCTGGGCTTCCTGGGACTCGGTGGTTGTGGGCTGATTGTAAAGCACGGAATGACTCTTAGAAACTGGGCGTCATTC | 200 | fold5 | initial_variant|chr1:752894:T:C|reference|HepG2 |
initial_variant|chr1:752894:T:C|reference | chr1:752894:T:C|reference | initial_variant | chr1:752894:T:C | reference | SKNSH | 1.313755 | 0.081004 | 53.343647 | true | 854.8 | 1,535.8 | -0.175464 | 0.131581 | 0.286524 | false | true | true | initial_variant|chr1:752894:T:C|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GCCCTTGGTCCGCTGTGGTTGGGCCTGCACCCAAGCCATGAGCACACGCAGCAATTGTGGCAGCAGAAGCTTCCTCTGGGCTCAGACTCAGGCTGATGCTGCGTCAGGACCTGCCGCGGTCTCGGCTGGGCTTCCTGGGACTCGGTGGTTGTGGGCTGATTGTAAAGCACGGAATGACTCTTAGAAACTGGGCGTCATTC | 200 | fold5 | initial_variant|chr1:752894:T:C|reference|SKNSH |
initial_variant|chr1:752894:T:C|reference | chr1:752894:T:C|reference | initial_variant | chr1:752894:T:C | reference | HCT116 | 0.870214 | 0.083136 | 19.829436 | false | 960 | 1,486.4 | -0.341603 | 0.17086 | 0.515863 | false | true | true | initial_variant|chr1:752894:T:C|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GCCCTTGGTCCGCTGTGGTTGGGCCTGCACCCAAGCCATGAGCACACGCAGCAATTGTGGCAGCAGAAGCTTCCTCTGGGCTCAGACTCAGGCTGATGCTGCGTCAGGACCTGCCGCGGTCTCGGCTGGGCTTCCTGGGACTCGGTGGTTGTGGGCTGATTGTAAAGCACGGAATGACTCTTAGAAACTGGGCGTCATTC | 200 | fold5 | initial_variant|chr1:752894:T:C|reference|HCT116 |
initial_variant|chr1:754503:G:A|reference | chr1:754503:G:A|reference | initial_variant | chr1:754503:G:A | reference | K562 | 2.240603 | 0.112856 | 81.599792 | true | 1,101.2 | 2,560.666667 | -0.319234 | 0.142617 | 0.76063 | false | true | true | initial_variant|chr1:754503:G:A|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTGGATGGAAAGGTTCTGCTACTTGTCCCGTGGTCAGGCCCAGCCAATGGAACGGAATGGAAGTGACTCTGCCCCTTATTGGCAGAAACTTTAAAAGCCGCACAACGTTCCTGCACCCTCCCCTCTGCCATGAGCCTGGCAGTGCTCAGGATGGGAAAATTATCTCACCTGGGCCTGAGGATACAGGAGCTACCCCCAGC | 200 | fold5 | initial_variant|chr1:754503:G:A|reference|K562 |
initial_variant|chr1:754503:G:A|reference | chr1:754503:G:A|reference | initial_variant | chr1:754503:G:A | reference | HepG2 | 3.327508 | 0.07045 | 302.228184 | true | 980.4 | 8,956.8 | -0.15677 | 0.075712 | 0.642916 | false | true | true | initial_variant|chr1:754503:G:A|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTGGATGGAAAGGTTCTGCTACTTGTCCCGTGGTCAGGCCCAGCCAATGGAACGGAATGGAAGTGACTCTGCCCCTTATTGGCAGAAACTTTAAAAGCCGCACAACGTTCCTGCACCCTCCCCTCTGCCATGAGCCTGGCAGTGCTCAGGATGGGAAAATTATCTCACCTGGGCCTGAGGATACAGGAGCTACCCCCAGC | 200 | fold5 | initial_variant|chr1:754503:G:A|reference|HepG2 |
initial_variant|chr1:754503:G:A|reference | chr1:754503:G:A|reference | initial_variant | chr1:754503:G:A | reference | SKNSH | 3.734533 | 0.091206 | 302.195773 | true | 852.2 | 8,183.8 | -0.31637 | 0.110701 | 1.310542 | true | true | true | initial_variant|chr1:754503:G:A|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTGGATGGAAAGGTTCTGCTACTTGTCCCGTGGTCAGGCCCAGCCAATGGAACGGAATGGAAGTGACTCTGCCCCTTATTGGCAGAAACTTTAAAAGCCGCACAACGTTCCTGCACCCTCCCCTCTGCCATGAGCCTGGCAGTGCTCAGGATGGGAAAATTATCTCACCTGGGCCTGAGGATACAGGAGCTACCCCCAGC | 200 | fold5 | initial_variant|chr1:754503:G:A|reference|SKNSH |
initial_variant|chr1:754503:G:A|reference | chr1:754503:G:A|reference | initial_variant | chr1:754503:G:A | reference | HCT116 | 3.886856 | 0.090924 | 302.260699 | true | 980.4 | 12,184.2 | -0.18096 | 0.078878 | 0.693401 | false | true | true | initial_variant|chr1:754503:G:A|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTGGATGGAAAGGTTCTGCTACTTGTCCCGTGGTCAGGCCCAGCCAATGGAACGGAATGGAAGTGACTCTGCCCCTTATTGGCAGAAACTTTAAAAGCCGCACAACGTTCCTGCACCCTCCCCTCTGCCATGAGCCTGGCAGTGCTCAGGATGGGAAAATTATCTCACCTGGGCCTGAGGATACAGGAGCTACCCCCAGC | 200 | fold5 | initial_variant|chr1:754503:G:A|reference|HCT116 |
initial_variant|chr1:754964:C:T|reference | chr1:754964:C:T|reference | initial_variant | chr1:754964:C:T | reference | K562 | 1.062416 | 0.133702 | 9.326497 | true | 1,461.6 | 1,475 | 0.196806 | 0.174555 | 0.213344 | false | true | true | initial_variant|chr1:754964:C:T|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GACCGAAAATTTCAGAAAAGCAAACCACCGCTGAAAGGCAACGTTATTTCTGTTGGCAGAAGGCGGCCTGAGCAATCTAGATTTTCCACGGTTCACCAACTAGTTTTTAAGGAAATATGGCTGTGAGAGGAATAAAACATGATTCCTACCTTTAAGGAACTCAGAGAAGTGAATTAAAGGAAGTCACAGATCAGACAACC | 200 | fold5 | initial_variant|chr1:754964:C:T|reference|K562 |
initial_variant|chr1:754964:C:T|reference | chr1:754964:C:T|reference | initial_variant | chr1:754964:C:T | reference | HepG2 | 0.806535 | 0.055239 | 42.471763 | false | 1,555.8 | 2,485 | 0.010132 | 0.104224 | 0.009512 | false | true | true | initial_variant|chr1:754964:C:T|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GACCGAAAATTTCAGAAAAGCAAACCACCGCTGAAAGGCAACGTTATTTCTGTTGGCAGAAGGCGGCCTGAGCAATCTAGATTTTCCACGGTTCACCAACTAGTTTTTAAGGAAATATGGCTGTGAGAGGAATAAAACATGATTCCTACCTTTAAGGAACTCAGAGAAGTGAATTAAAGGAAGTCACAGATCAGACAACC | 200 | fold5 | initial_variant|chr1:754964:C:T|reference|HepG2 |
initial_variant|chr1:754964:C:T|reference | chr1:754964:C:T|reference | initial_variant | chr1:754964:C:T | reference | SKNSH | 1.128513 | 0.073624 | 47.219136 | true | 1,298.8 | 2,029.4 | 0.14955 | 0.153711 | 0.170722 | false | true | true | initial_variant|chr1:754964:C:T|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GACCGAAAATTTCAGAAAAGCAAACCACCGCTGAAAGGCAACGTTATTTCTGTTGGCAGAAGGCGGCCTGAGCAATCTAGATTTTCCACGGTTCACCAACTAGTTTTTAAGGAAATATGGCTGTGAGAGGAATAAAACATGATTCCTACCTTTAAGGAACTCAGAGAAGTGAATTAAAGGAAGTCACAGATCAGACAACC | 200 | fold5 | initial_variant|chr1:754964:C:T|reference|SKNSH |
initial_variant|chr1:754964:C:T|reference | chr1:754964:C:T|reference | initial_variant | chr1:754964:C:T | reference | HCT116 | 0.410941 | 0.086981 | 0.55277 | false | 1,555.8 | 1,737.4 | -0.058506 | 0.130186 | 0.044708 | false | true | true | initial_variant|chr1:754964:C:T|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GACCGAAAATTTCAGAAAAGCAAACCACCGCTGAAAGGCAACGTTATTTCTGTTGGCAGAAGGCGGCCTGAGCAATCTAGATTTTCCACGGTTCACCAACTAGTTTTTAAGGAAATATGGCTGTGAGAGGAATAAAACATGATTCCTACCTTTAAGGAACTCAGAGAAGTGAATTAAAGGAAGTCACAGATCAGACAACC | 200 | fold5 | initial_variant|chr1:754964:C:T|reference|HCT116 |
initial_variant|chr1:755940:C:T|reference | chr1:755940:C:T|reference | initial_variant | chr1:755940:C:T | reference | K562 | -0.666075 | 0.445765 | 0 | false | 303 | 95.166667 | 0.704127 | 0.381311 | 0.515315 | false | true | true | initial_variant|chr1:755940:C:T|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTACACTACCTGCCTGGCCAGCATATCCGCCCTGTCTACACTACCTCCCAGCCCAGCAGATCCGCCCTGTCTACACTACCTGCCTGGCCAGTAGATCCACGCTATCTACACTACCTGCCTGGCCAGCAGATCCACCCTGTCAACACTACCTGCTTGTCCAGCAGGTCCACACTGTCTACACTACCTGCCTGTCCAGCAGG | 200 | fold5 | initial_variant|chr1:755940:C:T|reference|K562 |
initial_variant|chr1:755940:C:T|reference | chr1:755940:C:T|reference | initial_variant | chr1:755940:C:T | reference | HepG2 | -0.011977 | 0.125275 | 0 | false | 343.4 | 310.4 | 0.068958 | 0.312478 | 0.023919 | false | true | true | initial_variant|chr1:755940:C:T|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTACACTACCTGCCTGGCCAGCATATCCGCCCTGTCTACACTACCTCCCAGCCCAGCAGATCCGCCCTGTCTACACTACCTGCCTGGCCAGTAGATCCACGCTATCTACACTACCTGCCTGGCCAGCAGATCCACCCTGTCAACACTACCTGCTTGTCCAGCAGGTCCACACTGTCTACACTACCTGCCTGTCCAGCAGG | 200 | fold5 | initial_variant|chr1:755940:C:T|reference|HepG2 |
initial_variant|chr1:755940:C:T|reference | chr1:755940:C:T|reference | initial_variant | chr1:755940:C:T | reference | SKNSH | -0.97592 | 0.281532 | 0 | false | 272.4 | 101 | -0.620394 | 0.389598 | 0.394291 | false | true | true | initial_variant|chr1:755940:C:T|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTACACTACCTGCCTGGCCAGCATATCCGCCCTGTCTACACTACCTCCCAGCCCAGCAGATCCGCCCTGTCTACACTACCTGCCTGGCCAGTAGATCCACGCTATCTACACTACCTGCCTGGCCAGCAGATCCACCCTGTCAACACTACCTGCTTGTCCAGCAGGTCCACACTGTCTACACTACCTGCCTGTCCAGCAGG | 200 | fold5 | initial_variant|chr1:755940:C:T|reference|SKNSH |
initial_variant|chr1:755940:C:T|reference | chr1:755940:C:T|reference | initial_variant | chr1:755940:C:T | reference | HCT116 | -0.035973 | 0.171839 | 0 | false | 343.4 | 287.6 | 0.325265 | 0.3633 | 0.119796 | false | true | true | initial_variant|chr1:755940:C:T|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTACACTACCTGCCTGGCCAGCATATCCGCCCTGTCTACACTACCTCCCAGCCCAGCAGATCCGCCCTGTCTACACTACCTGCCTGGCCAGTAGATCCACGCTATCTACACTACCTGCCTGGCCAGCAGATCCACCCTGTCAACACTACCTGCTTGTCCAGCAGGTCCACACTGTCTACACTACCTGCCTGTCCAGCAGG | 200 | fold5 | initial_variant|chr1:755940:C:T|reference|HCT116 |
initial_variant|chr1:759444:ATATT:A|reference | chr1:759444:ATATT:A|reference | initial_variant | chr1:759444:ATATT:A | reference | K562 | 1.599668 | 0.374841 | 0 | false | 102 | 151.333333 | -0.367487 | 0.457045 | 0.126472 | false | true | true | initial_variant|chr1:759444:ATATT:A|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGAGTATACAGTCAAAATAGTTGTGAAAAGAAAAAAATAAAGTTGTCAAATTTCATGTAACCTATGTTATTTGGAAATTTAAAATAAGTTATATAAATATTTATAACAATGTTAAACAATTTCATAAGTGGACTGAATAAAACATAATATTTTATCATATACAATAGCTCCTGCCTTCCTGAGGAAAACATAAAATCAA | 200 | fold5 | initial_variant|chr1:759444:ATATT:A|reference|K562 |
initial_variant|chr1:759444:ATATT:A|reference | chr1:759444:ATATT:A|reference | initial_variant | chr1:759444:ATATT:A | reference | HepG2 | 1.670943 | 0.10153 | 55.047197 | true | 199.8 | 580.6 | -0.647277 | 0.228666 | 1.256631 | true | true | true | initial_variant|chr1:759444:ATATT:A|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGAGTATACAGTCAAAATAGTTGTGAAAAGAAAAAAATAAAGTTGTCAAATTTCATGTAACCTATGTTATTTGGAAATTTAAAATAAGTTATATAAATATTTATAACAATGTTAAACAATTTCATAAGTGGACTGAATAAAACATAATATTTTATCATATACAATAGCTCCTGCCTTCCTGAGGAAAACATAAAATCAA | 200 | fold5 | initial_variant|chr1:759444:ATATT:A|reference|HepG2 |
initial_variant|chr1:759444:ATATT:A|reference | chr1:759444:ATATT:A|reference | initial_variant | chr1:759444:ATATT:A | reference | SKNSH | 1.254904 | 0.17441 | 11.822489 | true | 212.6 | 366.2 | 0.130846 | 0.284668 | 0.05913 | false | true | true | initial_variant|chr1:759444:ATATT:A|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGAGTATACAGTCAAAATAGTTGTGAAAAGAAAAAAATAAAGTTGTCAAATTTCATGTAACCTATGTTATTTGGAAATTTAAAATAAGTTATATAAATATTTATAACAATGTTAAACAATTTCATAAGTGGACTGAATAAAACATAATATTTTATCATATACAATAGCTCCTGCCTTCCTGAGGAAAACATAAAATCAA | 200 | fold5 | initial_variant|chr1:759444:ATATT:A|reference|SKNSH |
initial_variant|chr1:759444:ATATT:A|reference | chr1:759444:ATATT:A|reference | initial_variant | chr1:759444:ATATT:A | reference | HCT116 | 1.656255 | 0.136753 | 33.23899 | true | 199.8 | 531.6 | -0.202998 | 0.239344 | 0.110444 | false | true | true | initial_variant|chr1:759444:ATATT:A|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGAGTATACAGTCAAAATAGTTGTGAAAAGAAAAAAATAAAGTTGTCAAATTTCATGTAACCTATGTTATTTGGAAATTTAAAATAAGTTATATAAATATTTATAACAATGTTAAACAATTTCATAAGTGGACTGAATAAAACATAATATTTTATCATATACAATAGCTCCTGCCTTCCTGAGGAAAACATAAAATCAA | 200 | fold5 | initial_variant|chr1:759444:ATATT:A|reference|HCT116 |
initial_variant|chr1:759700:T:C|reference | chr1:759700:T:C|reference | initial_variant | chr1:759700:T:C | reference | K562 | 0.26035 | 0.3312 | 0 | false | 195.6 | 112.166667 | 0.461962 | 0.3499 | 0.278752 | false | true | true | initial_variant|chr1:759700:T:C|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGTGTGTTTGTGTGTGCGTACATATATTTAAACTACAGAATATAAAATAGCATCTAATATACATCAAAAATGAGTTTCATAGAAAAATTCATTTTACATATATGTCTATAAAATAATAAAATTTATTCAGCCTCACAATTACTTTGTGAACTGGAAATAACAATGAGTTGTCATTTTATCCAAATCTAAAAAAAAACAT | 200 | fold5 | initial_variant|chr1:759700:T:C|reference|K562 |
initial_variant|chr1:759700:T:C|reference | chr1:759700:T:C|reference | initial_variant | chr1:759700:T:C | reference | HepG2 | 0.19796 | 0.104609 | 0 | false | 517.8 | 542.2 | -0.063246 | 0.173206 | 0.043153 | false | true | true | initial_variant|chr1:759700:T:C|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGTGTGTTTGTGTGTGCGTACATATATTTAAACTACAGAATATAAAATAGCATCTAATATACATCAAAAATGAGTTTCATAGAAAAATTCATTTTACATATATGTCTATAAAATAATAAAATTTATTCAGCCTCACAATTACTTTGTGAACTGGAAATAACAATGAGTTGTCATTTTATCCAAATCTAAAAAAAAACAT | 200 | fold5 | initial_variant|chr1:759700:T:C|reference|HepG2 |
initial_variant|chr1:759700:T:C|reference | chr1:759700:T:C|reference | initial_variant | chr1:759700:T:C | reference | SKNSH | 0.305494 | 0.139353 | 0 | false | 395.8 | 349.8 | 0.160387 | 0.203909 | 0.123942 | false | true | true | initial_variant|chr1:759700:T:C|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGTGTGTTTGTGTGTGCGTACATATATTTAAACTACAGAATATAAAATAGCATCTAATATACATCAAAAATGAGTTTCATAGAAAAATTCATTTTACATATATGTCTATAAAATAATAAAATTTATTCAGCCTCACAATTACTTTGTGAACTGGAAATAACAATGAGTTGTCATTTTATCCAAATCTAAAAAAAAACAT | 200 | fold5 | initial_variant|chr1:759700:T:C|reference|SKNSH |
initial_variant|chr1:759700:T:C|reference | chr1:759700:T:C|reference | initial_variant | chr1:759700:T:C | reference | HCT116 | 0.182708 | 0.153341 | 0 | false | 517.8 | 504.8 | 0.110317 | 0.210732 | 0.055109 | false | true | true | initial_variant|chr1:759700:T:C|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGTGTGTTTGTGTGTGCGTACATATATTTAAACTACAGAATATAAAATAGCATCTAATATACATCAAAAATGAGTTTCATAGAAAAATTCATTTTACATATATGTCTATAAAATAATAAAATTTATTCAGCCTCACAATTACTTTGTGAACTGGAAATAACAATGAGTTGTCATTTTATCCAAATCTAAAAAAAAACAT | 200 | fold5 | initial_variant|chr1:759700:T:C|reference|HCT116 |
initial_variant|chr1:760912:C:T|reference | chr1:760912:C:T|reference | initial_variant | chr1:760912:C:T | reference | K562 | -0.010639 | 0.76896 | 0 | false | 106.4 | 49.666667 | -0.661252 | 0.919278 | 0.107697 | false | true | true | initial_variant|chr1:760912:C:T|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTTTCTTTACCACAACCACATATATGGGGGCATAACTCAACATGTGTAAAAGACAATCTTCTGCTTTTCACTGAACCTCCAGGAATTCAGGACAATAAACGTCTACATGGAGACCAACAGGTGAGTTTTTCTGCCCCTTCTTTCATAACACCGTTCTTCCCTAGTGAAGTCCACACACATCCTTACATGGCAGCTGTGGG | 200 | fold5 | initial_variant|chr1:760912:C:T|reference|K562 |
initial_variant|chr1:760912:C:T|reference | chr1:760912:C:T|reference | initial_variant | chr1:760912:C:T | reference | HepG2 | -0.792497 | 0.229544 | 0 | false | 159.6 | 84.8 | 0.318764 | 0.438805 | 0.1063 | false | true | true | initial_variant|chr1:760912:C:T|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTTTCTTTACCACAACCACATATATGGGGGCATAACTCAACATGTGTAAAAGACAATCTTCTGCTTTTCACTGAACCTCCAGGAATTCAGGACAATAAACGTCTACATGGAGACCAACAGGTGAGTTTTTCTGCCCCTTCTTTCATAACACCGTTCTTCCCTAGTGAAGTCCACACACATCCTTACATGGCAGCTGTGGG | 200 | fold5 | initial_variant|chr1:760912:C:T|reference|HepG2 |
initial_variant|chr1:760912:C:T|reference | chr1:760912:C:T|reference | initial_variant | chr1:760912:C:T | reference | SKNSH | -0.241407 | 0.437959 | 0 | false | 105.2 | 63.4 | -0.046016 | 0.559606 | 0.008547 | false | true | true | initial_variant|chr1:760912:C:T|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTTTCTTTACCACAACCACATATATGGGGGCATAACTCAACATGTGTAAAAGACAATCTTCTGCTTTTCACTGAACCTCCAGGAATTCAGGACAATAAACGTCTACATGGAGACCAACAGGTGAGTTTTTCTGCCCCTTCTTTCATAACACCGTTCTTCCCTAGTGAAGTCCACACACATCCTTACATGGCAGCTGTGGG | 200 | fold5 | initial_variant|chr1:760912:C:T|reference|SKNSH |
initial_variant|chr1:760912:C:T|reference | chr1:760912:C:T|reference | initial_variant | chr1:760912:C:T | reference | HCT116 | -0.755773 | 0.310787 | 0 | false | 159.6 | 82 | 0.447416 | 0.47767 | 0.129012 | false | true | true | initial_variant|chr1:760912:C:T|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTTTCTTTACCACAACCACATATATGGGGGCATAACTCAACATGTGTAAAAGACAATCTTCTGCTTTTCACTGAACCTCCAGGAATTCAGGACAATAAACGTCTACATGGAGACCAACAGGTGAGTTTTTCTGCCCCTTCTTTCATAACACCGTTCTTCCCTAGTGAAGTCCACACACATCCTTACATGGCAGCTGTGGG | 200 | fold5 | initial_variant|chr1:760912:C:T|reference|HCT116 |
initial_variant|chr1:761147:T:C|reference | chr1:761147:T:C|reference | initial_variant | chr1:761147:T:C | reference | K562 | -0.412099 | 0.713106 | 0 | false | 120 | 45.5 | -1.332025 | 0.934105 | 0.318774 | false | true | true | initial_variant|chr1:761147:T:C|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CCTGAAGTCTCTGCTAGTACCTGCTGAGCACAGGGTCATGGGTGAGAATGGGCAAGTCTTTTTCTTTCTCTGGTTCCTGAACTTCCCAGGCTCTCTCACTTCTGGATCCTGAATACCCAAAAACCAAGCTTCCTTCCCAGAACCAACACCTCCTCCTCATTAGAAAGATACCTTTGTTCTGTGCTTACTTTATAAAGTCT | 200 | fold5 | initial_variant|chr1:761147:T:C|reference|K562 |
initial_variant|chr1:761147:T:C|reference | chr1:761147:T:C|reference | initial_variant | chr1:761147:T:C | reference | HepG2 | -0.226891 | 0.216535 | 0 | false | 157.4 | 120.8 | 0.483792 | 0.472209 | 0.18042 | false | true | true | initial_variant|chr1:761147:T:C|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CCTGAAGTCTCTGCTAGTACCTGCTGAGCACAGGGTCATGGGTGAGAATGGGCAAGTCTTTTTCTTTCTCTGGTTCCTGAACTTCCCAGGCTCTCTCACTTCTGGATCCTGAATACCCAAAAACCAAGCTTCCTTCCCAGAACCAACACCTCCTCCTCATTAGAAAGATACCTTTGTTCTGTGCTTACTTTATAAAGTCT | 200 | fold5 | initial_variant|chr1:761147:T:C|reference|HepG2 |
initial_variant|chr1:761147:T:C|reference | chr1:761147:T:C|reference | initial_variant | chr1:761147:T:C | reference | SKNSH | -0.239667 | 0.351073 | 0 | false | 108.4 | 66.2 | -0.908307 | 0.74782 | 0.244588 | false | true | true | initial_variant|chr1:761147:T:C|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CCTGAAGTCTCTGCTAGTACCTGCTGAGCACAGGGTCATGGGTGAGAATGGGCAAGTCTTTTTCTTTCTCTGGTTCCTGAACTTCCCAGGCTCTCTCACTTCTGGATCCTGAATACCCAAAAACCAAGCTTCCTTCCCAGAACCAACACCTCCTCCTCATTAGAAAGATACCTTTGTTCTGTGCTTACTTTATAAAGTCT | 200 | fold5 | initial_variant|chr1:761147:T:C|reference|SKNSH |
initial_variant|chr1:761147:T:C|reference | chr1:761147:T:C|reference | initial_variant | chr1:761147:T:C | reference | HCT116 | -0.045031 | 0.293084 | 0 | false | 157.4 | 131.2 | 0.548603 | 0.512416 | 0.160444 | false | true | true | initial_variant|chr1:761147:T:C|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CCTGAAGTCTCTGCTAGTACCTGCTGAGCACAGGGTCATGGGTGAGAATGGGCAAGTCTTTTTCTTTCTCTGGTTCCTGAACTTCCCAGGCTCTCTCACTTCTGGATCCTGAATACCCAAAAACCAAGCTTCCTTCCCAGAACCAACACCTCCTCCTCATTAGAAAGATACCTTTGTTCTGTGCTTACTTTATAAAGTCT | 200 | fold5 | initial_variant|chr1:761147:T:C|reference|HCT116 |
initial_variant|chr1:761957:A:AT|reference | chr1:761957:A:AT|reference | initial_variant | chr1:761957:A:AT | reference | K562 | 0.910541 | 0.299228 | 0 | false | 953.2 | 872.833333 | -0.553234 | 0.205037 | 1.138636 | false | true | true | initial_variant|chr1:761957:A:AT|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTTCAATATACAATTAAGACTGAAAAGTATTGAGGCCTCATAAGCTGAACCTGACACAATAAATTTAAAAGGGAAACTAATTTGGAAATCAGAAAACCACTAAGGAATTTGGGAATTAGGCTTCTGCTGCCCTCTCTGCTACTGACGGTCAAGGCCTCCTCATTGTATTCTGTCCTCCATATCTCTGCTGATTCCCATT | 199 | fold5 | initial_variant|chr1:761957:A:AT|reference|K562 |
initial_variant|chr1:761957:A:AT|reference | chr1:761957:A:AT|reference | initial_variant | chr1:761957:A:AT | reference | HepG2 | 0.911487 | 0.057161 | 51.432243 | false | 1,408.6 | 2,415.8 | -0.12024 | 0.102475 | 0.224845 | false | true | true | initial_variant|chr1:761957:A:AT|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTTCAATATACAATTAAGACTGAAAAGTATTGAGGCCTCATAAGCTGAACCTGACACAATAAATTTAAAAGGGAAACTAATTTGGAAATCAGAAAACCACTAAGGAATTTGGGAATTAGGCTTCTGCTGCCCTCTCTGCTACTGACGGTCAAGGCCTCCTCATTGTATTCTGTCCTCCATATCTCTGCTGATTCCCATT | 199 | fold5 | initial_variant|chr1:761957:A:AT|reference|HepG2 |
initial_variant|chr1:761957:A:AT|reference | chr1:761957:A:AT|reference | initial_variant | chr1:761957:A:AT | reference | SKNSH | 0.570503 | 0.102014 | 2.565608 | false | 1,260.8 | 1,350 | -0.045312 | 0.150853 | 0.035098 | false | true | true | initial_variant|chr1:761957:A:AT|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTTCAATATACAATTAAGACTGAAAAGTATTGAGGCCTCATAAGCTGAACCTGACACAATAAATTTAAAAGGGAAACTAATTTGGAAATCAGAAAACCACTAAGGAATTTGGGAATTAGGCTTCTGCTGCCCTCTCTGCTACTGACGGTCAAGGCCTCCTCATTGTATTCTGTCCTCCATATCTCTGCTGATTCCCATT | 199 | fold5 | initial_variant|chr1:761957:A:AT|reference|SKNSH |
initial_variant|chr1:761957:A:AT|reference | chr1:761957:A:AT|reference | initial_variant | chr1:761957:A:AT | reference | HCT116 | 0.066143 | 0.085584 | 0 | false | 1,408.6 | 1,250.8 | -0.04583 | 0.122893 | 0.035459 | false | true | true | initial_variant|chr1:761957:A:AT|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTTCAATATACAATTAAGACTGAAAAGTATTGAGGCCTCATAAGCTGAACCTGACACAATAAATTTAAAAGGGAAACTAATTTGGAAATCAGAAAACCACTAAGGAATTTGGGAATTAGGCTTCTGCTGCCCTCTCTGCTACTGACGGTCAAGGCCTCCTCATTGTATTCTGTCCTCCATATCTCTGCTGATTCCCATT | 199 | fold5 | initial_variant|chr1:761957:A:AT|reference|HCT116 |
initial_variant|chr1:780782:A:G|reference | chr1:780782:A:G|reference | initial_variant | chr1:780782:A:G | reference | K562 | 0.141898 | 0.335278 | 0 | false | 1,267.4 | 688.666667 | 0.239853 | 0.262462 | 0.15309 | false | true | true | initial_variant|chr1:780782:A:G|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTAAGTTATCTCAGAGCCCGCTTAGAACACAAGTGCTACGTCCCCCAAAAGCTTTGCAATGAGTATCTGATGGGAACAAACTCAGTCAAGGACAGGCCCAGGTTGGGGCTTGCAGGCTGCAGATTCAGAATTGTTTATGAGATGGGAGCCATACTTTCTAACAACAAGACCTGAATTTCTCAATTTAATCCAAGTCGTGA | 200 | fold5 | initial_variant|chr1:780782:A:G|reference|K562 |
initial_variant|chr1:780782:A:G|reference | chr1:780782:A:G|reference | initial_variant | chr1:780782:A:G | reference | HepG2 | -0.016623 | 0.065161 | 0 | false | 1,244.2 | 1,118 | 0.113895 | 0.132925 | 0.136457 | false | true | true | initial_variant|chr1:780782:A:G|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTAAGTTATCTCAGAGCCCGCTTAGAACACAAGTGCTACGTCCCCCAAAAGCTTTGCAATGAGTATCTGATGGGAACAAACTCAGTCAAGGACAGGCCCAGGTTGGGGCTTGCAGGCTGCAGATTCAGAATTGTTTATGAGATGGGAGCCATACTTTCTAACAACAAGACCTGAATTTCTCAATTTAATCCAAGTCGTGA | 200 | fold5 | initial_variant|chr1:780782:A:G|reference|HepG2 |
initial_variant|chr1:780782:A:G|reference | chr1:780782:A:G|reference | initial_variant | chr1:780782:A:G | reference | SKNSH | 0.097629 | 0.117047 | 0 | false | 1,032 | 784.8 | -0.256349 | 0.145043 | 0.480789 | false | true | true | initial_variant|chr1:780782:A:G|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTAAGTTATCTCAGAGCCCGCTTAGAACACAAGTGCTACGTCCCCCAAAAGCTTTGCAATGAGTATCTGATGGGAACAAACTCAGTCAAGGACAGGCCCAGGTTGGGGCTTGCAGGCTGCAGATTCAGAATTGTTTATGAGATGGGAGCCATACTTTCTAACAACAAGACCTGAATTTCTCAATTTAATCCAAGTCGTGA | 200 | fold5 | initial_variant|chr1:780782:A:G|reference|SKNSH |
initial_variant|chr1:780782:A:G|reference | chr1:780782:A:G|reference | initial_variant | chr1:780782:A:G | reference | HCT116 | -0.142074 | 0.122651 | 0 | false | 1,244.2 | 959.8 | -0.015366 | 0.177694 | 0.006405 | false | true | true | initial_variant|chr1:780782:A:G|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTAAGTTATCTCAGAGCCCGCTTAGAACACAAGTGCTACGTCCCCCAAAAGCTTTGCAATGAGTATCTGATGGGAACAAACTCAGTCAAGGACAGGCCCAGGTTGGGGCTTGCAGGCTGCAGATTCAGAATTGTTTATGAGATGGGAGCCATACTTTCTAACAACAAGACCTGAATTTCTCAATTTAATCCAAGTCGTGA | 200 | fold5 | initial_variant|chr1:780782:A:G|reference|HCT116 |
initial_variant|chr1:795222:C:G|reference | chr1:795222:C:G|reference | initial_variant | chr1:795222:C:G | reference | K562 | -0.509954 | 0.213593 | 0 | false | 992.2 | 334.166667 | 0.017662 | 0.167988 | 0.010228 | false | true | true | initial_variant|chr1:795222:C:G|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCACAATGTGGACTCTTATTGGAAGTATCTAAATTTCACTTCAGAATTGCAGCCCTGAGTTATTAAACACACCTCTACTACACCTATGAAATTGTCTACAAATTGTCTTAGTTTCTTTTCAGCTTTGATTTCTAGAATTGCATGACATTGAAGACAAATGATATAATACCCATAAAGAAGGTTTTATGACCTCTTTCAT | 200 | fold5 | initial_variant|chr1:795222:C:G|reference|K562 |
initial_variant|chr1:795222:C:G|reference | chr1:795222:C:G|reference | initial_variant | chr1:795222:C:G | reference | HepG2 | -0.445112 | 0.061867 | 7.119096 | false | 1,530.8 | 1,026.2 | 0.030364 | 0.087864 | 0.040474 | false | true | true | initial_variant|chr1:795222:C:G|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCACAATGTGGACTCTTATTGGAAGTATCTAAATTTCACTTCAGAATTGCAGCCCTGAGTTATTAAACACACCTCTACTACACCTATGAAATTGTCTACAAATTGTCTTAGTTTCTTTTCAGCTTTGATTTCTAGAATTGCATGACATTGAAGACAAATGATATAATACCCATAAAGAAGGTTTTATGACCTCTTTCAT | 200 | fold5 | initial_variant|chr1:795222:C:G|reference|HepG2 |
initial_variant|chr1:795222:C:G|reference | chr1:795222:C:G|reference | initial_variant | chr1:795222:C:G | reference | SKNSH | -0.510855 | 0.136538 | 0 | false | 1,199.4 | 593.4 | 0.120258 | 0.170844 | 0.105163 | false | true | true | initial_variant|chr1:795222:C:G|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCACAATGTGGACTCTTATTGGAAGTATCTAAATTTCACTTCAGAATTGCAGCCCTGAGTTATTAAACACACCTCTACTACACCTATGAAATTGTCTACAAATTGTCTTAGTTTCTTTTCAGCTTTGATTTCTAGAATTGCATGACATTGAAGACAAATGATATAATACCCATAAAGAAGGTTTTATGACCTCTTTCAT | 200 | fold5 | initial_variant|chr1:795222:C:G|reference|SKNSH |
initial_variant|chr1:795222:C:G|reference | chr1:795222:C:G|reference | initial_variant | chr1:795222:C:G | reference | HCT116 | -0.213674 | 0.105809 | 0 | false | 1,530.8 | 1,120 | 0.099333 | 0.107972 | 0.125264 | false | true | true | initial_variant|chr1:795222:C:G|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCCACAATGTGGACTCTTATTGGAAGTATCTAAATTTCACTTCAGAATTGCAGCCCTGAGTTATTAAACACACCTCTACTACACCTATGAAATTGTCTACAAATTGTCTTAGTTTCTTTTCAGCTTTGATTTCTAGAATTGCATGACATTGAAGACAAATGATATAATACCCATAAAGAAGGTTTTATGACCTCTTTCAT | 200 | fold5 | initial_variant|chr1:795222:C:G|reference|HCT116 |
initial_variant|chr1:796511:C:G|reference | chr1:796511:C:G|reference | initial_variant | chr1:796511:C:G | reference | K562 | 0.33983 | 0.218746 | 0 | false | 337.6 | 209 | -0.365395 | 0.34596 | 0.191636 | false | true | true | initial_variant|chr1:796511:C:G|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGGGGCACCAGCTGGTCTTGCCACTGACTTCATTCCTGTTGTTTTTCAACTTTTACTTCCTCCTCCTCTTCAGACAGGAGACAGTAAGAGAAATGGCCTCTCTCCTCAGCGGCACAATGGACTTTAGACATCGCGCCTGTTTTGTACTCTCCAAGCCGGACTTCTCTACTCGCTGGCCTGGCGCTGATGCCCAGAGGCCC | 200 | fold5 | initial_variant|chr1:796511:C:G|reference|K562 |
initial_variant|chr1:796511:C:G|reference | chr1:796511:C:G|reference | initial_variant | chr1:796511:C:G | reference | HepG2 | 1.726631 | 0.073581 | 115.95342 | true | 367.4 | 1,106.6 | -0.347632 | 0.173219 | 0.603546 | false | true | true | initial_variant|chr1:796511:C:G|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGGGGCACCAGCTGGTCTTGCCACTGACTTCATTCCTGTTGTTTTTCAACTTTTACTTCCTCCTCCTCTTCAGACAGGAGACAGTAAGAGAAATGGCCTCTCTCCTCAGCGGCACAATGGACTTTAGACATCGCGCCTGTTTTGTACTCTCCAAGCCGGACTTCTCTACTCGCTGGCCTGGCGCTGATGCCCAGAGGCCC | 200 | fold5 | initial_variant|chr1:796511:C:G|reference|HepG2 |
initial_variant|chr1:796511:C:G|reference | chr1:796511:C:G|reference | initial_variant | chr1:796511:C:G | reference | SKNSH | 1.539733 | 0.107155 | 41.008935 | true | 337.4 | 711.4 | -0.728887 | 0.19009 | 2.563832 | true | true | true | initial_variant|chr1:796511:C:G|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGGGGCACCAGCTGGTCTTGCCACTGACTTCATTCCTGTTGTTTTTCAACTTTTACTTCCTCCTCCTCTTCAGACAGGAGACAGTAAGAGAAATGGCCTCTCTCCTCAGCGGCACAATGGACTTTAGACATCGCGCCTGTTTTGTACTCTCCAAGCCGGACTTCTCTACTCGCTGGCCTGGCGCTGATGCCCAGAGGCCC | 200 | fold5 | initial_variant|chr1:796511:C:G|reference|SKNSH |
initial_variant|chr1:796511:C:G|reference | chr1:796511:C:G|reference | initial_variant | chr1:796511:C:G | reference | HCT116 | 0.896742 | 0.132014 | 8.07824 | false | 367.4 | 576.2 | 0.101006 | 0.212185 | 0.048508 | false | true | true | initial_variant|chr1:796511:C:G|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGGGGCACCAGCTGGTCTTGCCACTGACTTCATTCCTGTTGTTTTTCAACTTTTACTTCCTCCTCCTCTTCAGACAGGAGACAGTAAGAGAAATGGCCTCTCTCCTCAGCGGCACAATGGACTTTAGACATCGCGCCTGTTTTGTACTCTCCAAGCCGGACTTCTCTACTCGCTGGCCTGGCGCTGATGCCCAGAGGCCC | 200 | fold5 | initial_variant|chr1:796511:C:G|reference|HCT116 |
initial_variant|chr1:797126:GTAAT:G|reference | chr1:797126:GTAAT:G|reference | initial_variant | chr1:797126:GTAAT:G | reference | K562 | -0.587435 | 0.258342 | 0 | false | 568 | 185.666667 | 0.056423 | 0.259232 | 0.023809 | false | true | true | initial_variant|chr1:797126:GTAAT:G|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | ATGTACATGTATGTGTGTATGTGCATATGTGTGCATGTGAAGATGGATAGATGATAGATACATAGGTGATTTATGTATAGGTAGATGACAGATATTGGTAATTAATTGATAGTAGATAGGTTGATAGTATATAGGTGATTGATAGATGGATGATAGATCATTGATAGATGATAGGTAGATAGTAGATAGATTATAGGTAG | 200 | fold5 | initial_variant|chr1:797126:GTAAT:G|reference|K562 |
initial_variant|chr1:797126:GTAAT:G|reference | chr1:797126:GTAAT:G|reference | initial_variant | chr1:797126:GTAAT:G | reference | HepG2 | -0.613365 | 0.100369 | 4.10281 | false | 616.8 | 367 | -0.149422 | 0.167589 | 0.144715 | false | true | true | initial_variant|chr1:797126:GTAAT:G|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | ATGTACATGTATGTGTGTATGTGCATATGTGTGCATGTGAAGATGGATAGATGATAGATACATAGGTGATTTATGTATAGGTAGATGACAGATATTGGTAATTAATTGATAGTAGATAGGTTGATAGTATATAGGTGATTGATAGATGGATGATAGATCATTGATAGATGATAGGTAGATAGTAGATAGATTATAGGTAG | 200 | fold5 | initial_variant|chr1:797126:GTAAT:G|reference|HepG2 |
initial_variant|chr1:797126:GTAAT:G|reference | chr1:797126:GTAAT:G|reference | initial_variant | chr1:797126:GTAAT:G | reference | SKNSH | -0.909048 | 0.191149 | 1.252605 | false | 571.4 | 220.6 | -0.072031 | 0.233627 | 0.036216 | false | true | true | initial_variant|chr1:797126:GTAAT:G|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | ATGTACATGTATGTGTGTATGTGCATATGTGTGCATGTGAAGATGGATAGATGATAGATACATAGGTGATTTATGTATAGGTAGATGACAGATATTGGTAATTAATTGATAGTAGATAGGTTGATAGTATATAGGTGATTGATAGATGGATGATAGATCATTGATAGATGATAGGTAGATAGTAGATAGATTATAGGTAG | 200 | fold5 | initial_variant|chr1:797126:GTAAT:G|reference|SKNSH |
initial_variant|chr1:797126:GTAAT:G|reference | chr1:797126:GTAAT:G|reference | initial_variant | chr1:797126:GTAAT:G | reference | HCT116 | -0.320608 | 0.142253 | 0 | false | 616.8 | 415 | 0.006186 | 0.191618 | 0.002098 | false | true | true | initial_variant|chr1:797126:GTAAT:G|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | ATGTACATGTATGTGTGTATGTGCATATGTGTGCATGTGAAGATGGATAGATGATAGATACATAGGTGATTTATGTATAGGTAGATGACAGATATTGGTAATTAATTGATAGTAGATAGGTTGATAGTATATAGGTGATTGATAGATGGATGATAGATCATTGATAGATGATAGGTAGATAGTAGATAGATTATAGGTAG | 200 | fold5 | initial_variant|chr1:797126:GTAAT:G|reference|HCT116 |
initial_variant|chr1:798801:G:A|reference | chr1:798801:G:A|reference | initial_variant | chr1:798801:G:A | reference | K562 | 0.047113 | 0.231642 | 0 | false | 535 | 268.666667 | -0.250126 | 0.387707 | 0.092584 | false | true | true | initial_variant|chr1:798801:G:A|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGTTGTGCCTCTCTCATGCCTCTTTCCTTGGATAAAGAGCAAGCACATTACGAGCCACACTTGGTGCTGGTGCTGTGGCATGCAACACTACCTAATGCGAGAGAAAGATGTGAGCAAATATCCGGAATATACAAATATAATACAAAAATACAAATATAATCAGTTATACAGCAAACAGCTGTGGGAACAGCAGCTCTGC | 200 | fold5 | initial_variant|chr1:798801:G:A|reference|K562 |
initial_variant|chr1:798801:G:A|reference | chr1:798801:G:A|reference | initial_variant | chr1:798801:G:A | reference | HepG2 | 0.220348 | 0.084225 | 0 | false | 632.2 | 673.4 | -0.308692 | 0.178383 | 0.44854 | false | true | true | initial_variant|chr1:798801:G:A|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGTTGTGCCTCTCTCATGCCTCTTTCCTTGGATAAAGAGCAAGCACATTACGAGCCACACTTGGTGCTGGTGCTGTGGCATGCAACACTACCTAATGCGAGAGAAAGATGTGAGCAAATATCCGGAATATACAAATATAATACAAAAATACAAATATAATCAGTTATACAGCAAACAGCTGTGGGAACAGCAGCTCTGC | 200 | fold5 | initial_variant|chr1:798801:G:A|reference|HepG2 |
initial_variant|chr1:798801:G:A|reference | chr1:798801:G:A|reference | initial_variant | chr1:798801:G:A | reference | SKNSH | -0.290377 | 0.146412 | 0 | false | 595.4 | 350.2 | 0.262955 | 0.257684 | 0.183302 | false | true | true | initial_variant|chr1:798801:G:A|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGTTGTGCCTCTCTCATGCCTCTTTCCTTGGATAAAGAGCAAGCACATTACGAGCCACACTTGGTGCTGGTGCTGTGGCATGCAACACTACCTAATGCGAGAGAAAGATGTGAGCAAATATCCGGAATATACAAATATAATACAAAAATACAAATATAATCAGTTATACAGCAAACAGCTGTGGGAACAGCAGCTCTGC | 200 | fold5 | initial_variant|chr1:798801:G:A|reference|SKNSH |
initial_variant|chr1:798801:G:A|reference | chr1:798801:G:A|reference | initial_variant | chr1:798801:G:A | reference | HCT116 | -0.016304 | 0.136356 | 0 | false | 632.2 | 530 | 0.185275 | 0.17456 | 0.158373 | false | true | true | initial_variant|chr1:798801:G:A|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | GTGTTGTGCCTCTCTCATGCCTCTTTCCTTGGATAAAGAGCAAGCACATTACGAGCCACACTTGGTGCTGGTGCTGTGGCATGCAACACTACCTAATGCGAGAGAAAGATGTGAGCAAATATCCGGAATATACAAATATAATACAAAAATACAAATATAATCAGTTATACAGCAAACAGCTGTGGGAACAGCAGCTCTGC | 200 | fold5 | initial_variant|chr1:798801:G:A|reference|HCT116 |
initial_variant|chr1:799499:T:C|reference | chr1:799499:T:C|reference | initial_variant | chr1:799499:T:C | reference | K562 | 0.491147 | 0.258035 | 0 | false | 556.2 | 375.666667 | 0.575593 | 0.234322 | 0.92473 | false | true | true | initial_variant|chr1:799499:T:C|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTAGATTGACAGATGTGGCCGTGTCTATCAGGGAACATGGACTGAGGCCAGTGCTTTCAACCATACTCACTTTTCACTGTGTTCAGAGGGGGTGGGAAATCTCCCCTAAGGAGGAGATACGACGTGTGCAGATTGAGAGCTGGGACCACACGGATTCCTCCAGGGGCAAGGGCTGGTGACCTTGCAGTAACTTCCAGAGG | 200 | fold5 | initial_variant|chr1:799499:T:C|reference|K562 |
initial_variant|chr1:799499:T:C|reference | chr1:799499:T:C|reference | initial_variant | chr1:799499:T:C | reference | HepG2 | 0.008664 | 0.104921 | 0 | false | 591 | 543.2 | -0.132266 | 0.1417 | 0.155075 | false | true | true | initial_variant|chr1:799499:T:C|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTAGATTGACAGATGTGGCCGTGTCTATCAGGGAACATGGACTGAGGCCAGTGCTTTCAACCATACTCACTTTTCACTGTGTTCAGAGGGGGTGGGAAATCTCCCCTAAGGAGGAGATACGACGTGTGCAGATTGAGAGCTGGGACCACACGGATTCCTCCAGGGGCAAGGGCTGGTGACCTTGCAGTAACTTCCAGAGG | 200 | fold5 | initial_variant|chr1:799499:T:C|reference|HepG2 |
initial_variant|chr1:799499:T:C|reference | chr1:799499:T:C|reference | initial_variant | chr1:799499:T:C | reference | SKNSH | -0.054159 | 0.162425 | 0 | false | 510.8 | 352.6 | -0.284718 | 0.203116 | 0.312564 | false | true | true | initial_variant|chr1:799499:T:C|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTAGATTGACAGATGTGGCCGTGTCTATCAGGGAACATGGACTGAGGCCAGTGCTTTCAACCATACTCACTTTTCACTGTGTTCAGAGGGGGTGGGAAATCTCCCCTAAGGAGGAGATACGACGTGTGCAGATTGAGAGCTGGGACCACACGGATTCCTCCAGGGGCAAGGGCTGGTGACCTTGCAGTAACTTCCAGAGG | 200 | fold5 | initial_variant|chr1:799499:T:C|reference|SKNSH |
initial_variant|chr1:799499:T:C|reference | chr1:799499:T:C|reference | initial_variant | chr1:799499:T:C | reference | HCT116 | 0.052831 | 0.137987 | 0 | false | 591 | 515.4 | -0.140414 | 0.169994 | 0.106087 | false | true | true | initial_variant|chr1:799499:T:C|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTAGATTGACAGATGTGGCCGTGTCTATCAGGGAACATGGACTGAGGCCAGTGCTTTCAACCATACTCACTTTTCACTGTGTTCAGAGGGGGTGGGAAATCTCCCCTAAGGAGGAGATACGACGTGTGCAGATTGAGAGCTGGGACCACACGGATTCCTCCAGGGGCAAGGGCTGGTGACCTTGCAGTAACTTCCAGAGG | 200 | fold5 | initial_variant|chr1:799499:T:C|reference|HCT116 |
initial_variant|chr1:801661:C:T|reference | chr1:801661:C:T|reference | initial_variant | chr1:801661:C:T | reference | K562 | -0.024861 | 0.179889 | 0 | false | 895.2 | 421.833333 | -0.378934 | 0.163422 | 0.818228 | false | true | true | initial_variant|chr1:801661:C:T|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGGATAGAAAACAAAACCCTTCTAGAGAGTTTACGTGGAGGCTACCACGGGCATCGCTGCTCTGCAGTCTGTCAACCAGAGGCCCCTGGTGCTGCAGCACGGCCTTGGCAGCTTCACCAACAGGAATGTGTTCTCCTAGGGTACTGGAGGGTGGCAGTCCCAGAGCAAGGTGTGGCAGGGCTGCTCCTCCTGAGGCCTCT | 200 | fold5 | initial_variant|chr1:801661:C:T|reference|K562 |
initial_variant|chr1:801661:C:T|reference | chr1:801661:C:T|reference | initial_variant | chr1:801661:C:T | reference | HepG2 | 0.084452 | 0.067688 | 0 | false | 912.4 | 884.2 | -0.154183 | 0.121511 | 0.256696 | false | true | true | initial_variant|chr1:801661:C:T|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGGATAGAAAACAAAACCCTTCTAGAGAGTTTACGTGGAGGCTACCACGGGCATCGCTGCTCTGCAGTCTGTCAACCAGAGGCCCCTGGTGCTGCAGCACGGCCTTGGCAGCTTCACCAACAGGAATGTGTTCTCCTAGGGTACTGGAGGGTGGCAGTCCCAGAGCAAGGTGTGGCAGGGCTGCTCCTCCTGAGGCCTCT | 200 | fold5 | initial_variant|chr1:801661:C:T|reference|HepG2 |
initial_variant|chr1:801661:C:T|reference | chr1:801661:C:T|reference | initial_variant | chr1:801661:C:T | reference | SKNSH | 0.064672 | 0.131644 | 0 | false | 667.4 | 491.6 | -0.242447 | 0.156095 | 0.376224 | false | true | true | initial_variant|chr1:801661:C:T|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGGATAGAAAACAAAACCCTTCTAGAGAGTTTACGTGGAGGCTACCACGGGCATCGCTGCTCTGCAGTCTGTCAACCAGAGGCCCCTGGTGCTGCAGCACGGCCTTGGCAGCTTCACCAACAGGAATGTGTTCTCCTAGGGTACTGGAGGGTGGCAGTCCCAGAGCAAGGTGTGGCAGGGCTGCTCCTCCTGAGGCCTCT | 200 | fold5 | initial_variant|chr1:801661:C:T|reference|SKNSH |
initial_variant|chr1:801661:C:T|reference | chr1:801661:C:T|reference | initial_variant | chr1:801661:C:T | reference | HCT116 | 0.411788 | 0.107538 | 0 | false | 912.4 | 1,023.4 | -0.160707 | 0.143853 | 0.172262 | false | true | true | initial_variant|chr1:801661:C:T|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | AGGATAGAAAACAAAACCCTTCTAGAGAGTTTACGTGGAGGCTACCACGGGCATCGCTGCTCTGCAGTCTGTCAACCAGAGGCCCCTGGTGCTGCAGCACGGCCTTGGCAGCTTCACCAACAGGAATGTGTTCTCCTAGGGTACTGGAGGGTGGCAGTCCCAGAGCAAGGTGTGGCAGGGCTGCTCCTCCTGAGGCCTCT | 200 | fold5 | initial_variant|chr1:801661:C:T|reference|HCT116 |
initial_variant|chr1:801680:A:C|reference | chr1:801680:A:C|reference | initial_variant | chr1:801680:A:C | reference | K562 | -0.435455 | 0.338213 | 0 | false | 401.6 | 143 | 0.869785 | 0.34051 | 1.007387 | false | true | true | initial_variant|chr1:801680:A:C|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTCTAGAGAGTTTACGTGGAGGCTACCACGGGCATCGCTGCTCTGCAGTCTGTCAACCAGAGGCCCCTGGTGCTGCAGCACGGCCTTGGCAGCTTCACCAACAGGAATGTGTTCTCCTAGGGTACTGGAGGGTGGCAGTCCCAGAGCAAGGTGTGGCAGGGCTGCTCCTCCTGAGGCCTCTCCCTGGCTTGCAGACGACA | 200 | fold5 | initial_variant|chr1:801680:A:C|reference|K562 |
initial_variant|chr1:801680:A:C|reference | chr1:801680:A:C|reference | initial_variant | chr1:801680:A:C | reference | HepG2 | -0.476068 | 0.192219 | 0 | false | 343.4 | 224.8 | 0.692223 | 0.290246 | 0.863732 | false | true | true | initial_variant|chr1:801680:A:C|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTCTAGAGAGTTTACGTGGAGGCTACCACGGGCATCGCTGCTCTGCAGTCTGTCAACCAGAGGCCCCTGGTGCTGCAGCACGGCCTTGGCAGCTTCACCAACAGGAATGTGTTCTCCTAGGGTACTGGAGGGTGGCAGTCCCAGAGCAAGGTGTGGCAGGGCTGCTCCTCCTGAGGCCTCTCCCTGGCTTGCAGACGACA | 200 | fold5 | initial_variant|chr1:801680:A:C|reference|HepG2 |
initial_variant|chr1:801680:A:C|reference | chr1:801680:A:C|reference | initial_variant | chr1:801680:A:C | reference | SKNSH | -0.275655 | 0.251549 | 0 | false | 209.8 | 127.6 | -0.310715 | 0.419718 | 0.113139 | false | true | true | initial_variant|chr1:801680:A:C|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTCTAGAGAGTTTACGTGGAGGCTACCACGGGCATCGCTGCTCTGCAGTCTGTCAACCAGAGGCCCCTGGTGCTGCAGCACGGCCTTGGCAGCTTCACCAACAGGAATGTGTTCTCCTAGGGTACTGGAGGGTGGCAGTCCCAGAGCAAGGTGTGGCAGGGCTGCTCCTCCTGAGGCCTCTCCCTGGCTTGCAGACGACA | 200 | fold5 | initial_variant|chr1:801680:A:C|reference|SKNSH |
initial_variant|chr1:801680:A:C|reference | chr1:801680:A:C|reference | initial_variant | chr1:801680:A:C | reference | HCT116 | 0.396053 | 0.146065 | 5.42407 | true | 343.4 | 384 | 0.635236 | 0.240649 | 0.957487 | false | true | true | initial_variant|chr1:801680:A:C|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TTCTAGAGAGTTTACGTGGAGGCTACCACGGGCATCGCTGCTCTGCAGTCTGTCAACCAGAGGCCCCTGGTGCTGCAGCACGGCCTTGGCAGCTTCACCAACAGGAATGTGTTCTCCTAGGGTACTGGAGGGTGGCAGTCCCAGAGCAAGGTGTGGCAGGGCTGCTCCTCCTGAGGCCTCTCCCTGGCTTGCAGACGACA | 200 | fold5 | initial_variant|chr1:801680:A:C|reference|HCT116 |
initial_variant|chr1:801858:C:T|reference | chr1:801858:C:T|reference | initial_variant | chr1:801858:C:T | reference | K562 | 1.192051 | 0.300666 | 0 | false | 177.2 | 205.666667 | -0.035191 | 0.341283 | 0.010022 | false | true | true | initial_variant|chr1:801858:C:T|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCTCCCTGGCTTGCAGACGACATCTTCTCCCATGTTCTCATGTGGGCCTCCCTCTGCACACGTATATCTGACATCCTCCCATGTCCTCACACGTTCCTCCCTTTGCACTCGAATCCCGGACATCCTCCTATGTCTCACGTGGTCCTCTCTCTGCACTCGAATCCCAGACATCCTCCTATGTCCTCACATGGTCCTCCCCC | 200 | fold5 | initial_variant|chr1:801858:C:T|reference|K562 |
initial_variant|chr1:801858:C:T|reference | chr1:801858:C:T|reference | initial_variant | chr1:801858:C:T | reference | HepG2 | 2.146228 | 0.103122 | 90.393406 | true | 144 | 581.8 | -0.630162 | 0.275382 | 0.791546 | false | true | true | initial_variant|chr1:801858:C:T|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCTCCCTGGCTTGCAGACGACATCTTCTCCCATGTTCTCATGTGGGCCTCCCTCTGCACACGTATATCTGACATCCTCCCATGTCCTCACACGTTCCTCCCTTTGCACTCGAATCCCGGACATCCTCCTATGTCTCACGTGGTCCTCTCTCTGCACTCGAATCCCAGACATCCTCCTATGTCCTCACATGGTCCTCCCCC | 200 | fold5 | initial_variant|chr1:801858:C:T|reference|HepG2 |
initial_variant|chr1:801858:C:T|reference | chr1:801858:C:T|reference | initial_variant | chr1:801858:C:T | reference | SKNSH | 3.864674 | 0.113598 | 247.874656 | true | 127 | 1,355.2 | -0.339236 | 0.388202 | 0.144134 | false | true | true | initial_variant|chr1:801858:C:T|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCTCCCTGGCTTGCAGACGACATCTTCTCCCATGTTCTCATGTGGGCCTCCCTCTGCACACGTATATCTGACATCCTCCCATGTCCTCACACGTTCCTCCCTTTGCACTCGAATCCCGGACATCCTCCTATGTCTCACGTGGTCCTCTCTCTGCACTCGAATCCCAGACATCCTCCTATGTCCTCACATGGTCCTCCCCC | 200 | fold5 | initial_variant|chr1:801858:C:T|reference|SKNSH |
initial_variant|chr1:801858:C:T|reference | chr1:801858:C:T|reference | initial_variant | chr1:801858:C:T | reference | HCT116 | 1.242878 | 0.218137 | 2.831479 | true | 144 | 286.6 | -0.613218 | 0.362035 | 0.368213 | false | true | true | initial_variant|chr1:801858:C:T|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | TCTCCCTGGCTTGCAGACGACATCTTCTCCCATGTTCTCATGTGGGCCTCCCTCTGCACACGTATATCTGACATCCTCCCATGTCCTCACACGTTCCTCCCTTTGCACTCGAATCCCGGACATCCTCCTATGTCTCACGTGGTCCTCTCTCTGCACTCGAATCCCAGACATCCTCCTATGTCCTCACATGGTCCTCCCCC | 200 | fold5 | initial_variant|chr1:801858:C:T|reference|HCT116 |
initial_variant|chr1:802398:C:T|reference | chr1:802398:C:T|reference | initial_variant | chr1:802398:C:T | reference | K562 | 1.316826 | 0.521511 | 0 | false | 78 | 93.833333 | -0.111565 | 0.71151 | 0.016427 | false | true | true | initial_variant|chr1:802398:C:T|reference|K562 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTCTGCACTCACATCCCTGACGTCCTCCCGAGCCCTCACGTGGTCCTCCCCCTGCACTCACATCCCTGACATCCTCCCGTGCTCTCACGTGGTCCTCCCCCTGCACTCACATCCCTGACGTCCTCCCGTGCCCTCACATGGTCCTCCCCCTGCACTTGCATCCATGACGTCCTCCCATGCCCTCACGTGGTCCTCCCCCT | 200 | fold5 | initial_variant|chr1:802398:C:T|reference|K562 |
initial_variant|chr1:802398:C:T|reference | chr1:802398:C:T|reference | initial_variant | chr1:802398:C:T | reference | HepG2 | 1.27976 | 0.175314 | 7.456263 | true | 81.2 | 181.4 | -0.117696 | 0.480582 | 0.026697 | false | true | true | initial_variant|chr1:802398:C:T|reference|HepG2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTCTGCACTCACATCCCTGACGTCCTCCCGAGCCCTCACGTGGTCCTCCCCCTGCACTCACATCCCTGACATCCTCCCGTGCTCTCACGTGGTCCTCCCCCTGCACTCACATCCCTGACGTCCTCCCGTGCCCTCACATGGTCCTCCCCCTGCACTTGCATCCATGACGTCCTCCCATGCCCTCACGTGGTCCTCCCCCT | 200 | fold5 | initial_variant|chr1:802398:C:T|reference|HepG2 |
initial_variant|chr1:802398:C:T|reference | chr1:802398:C:T|reference | initial_variant | chr1:802398:C:T | reference | SKNSH | 1.742094 | 0.311055 | 6.313866 | true | 74.4 | 175.8 | 0.584012 | 0.557971 | 0.191052 | false | true | true | initial_variant|chr1:802398:C:T|reference|SKNSH | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTCTGCACTCACATCCCTGACGTCCTCCCGAGCCCTCACGTGGTCCTCCCCCTGCACTCACATCCCTGACATCCTCCCGTGCTCTCACGTGGTCCTCCCCCTGCACTCACATCCCTGACGTCCTCCCGTGCCCTCACATGGTCCTCCCCCTGCACTTGCATCCATGACGTCCTCCCATGCCCTCACGTGGTCCTCCCCCT | 200 | fold5 | initial_variant|chr1:802398:C:T|reference|SKNSH |
initial_variant|chr1:802398:C:T|reference | chr1:802398:C:T|reference | initial_variant | chr1:802398:C:T | reference | HCT116 | 0.97576 | 0.284265 | 0 | false | 81.2 | 135.2 | 0.159894 | 0.563682 | 0.025892 | false | true | true | initial_variant|chr1:802398:C:T|reference|HCT116 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | CTCTGCACTCACATCCCTGACGTCCTCCCGAGCCCTCACGTGGTCCTCCCCCTGCACTCACATCCCTGACATCCTCCCGTGCTCTCACGTGGTCCTCCCCCTGCACTCACATCCCTGACGTCCTCCCGTGCCCTCACATGGTCCTCCCCCTGCACTTGCATCCATGACGTCCTCCCATGCCCTCACGTGGTCCTCCCCCT | 200 | fold5 | initial_variant|chr1:802398:C:T|reference|HCT116 |
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promoter_diff experiment resources
Processed Gosai MPRA and PromoterZoo datasets, a Gosai MMseqs reference database, pretrained MPRA oracle weights, and instructions for obtaining the upstream model weights used by promoter_diff.
After cloning or downloading this dataset:
Set the resource directory to the absolute path of your dataset clone:
export PROMOTER_DIFF_ROOT=/absolute/path/to/promoter-diff-resourcesIf you cloned with Git, fetch the actual data files using Git LFS:
git lfs install git -C "$PROMOTER_DIFF_ROOT" lfs pullInstall the code environment. Install uv if needed, then clone the code repository (or enter your existing checkout):
git clone https://github.com/rcalef/promoter_diff.git cd promoter_diff uv sync --locked source .venv/bin/activateRun the remaining Python commands from this activated environment.
Verify the dataset files:
python "$PROMOTER_DIFF_ROOT/bundle.py" verifyDownload the upstream model weights. For NTv3, first accept the access conditions on the Hugging Face pages for 100M pre, 650M pre, 100M post, and shared code, then authenticate:
hf auth login python "$PROMOTER_DIFF_ROOT/bundle.py" modelsThis restores all pinned models and their shared code. To download only the models your experiment needs, pass their folder names, for example:
python "$PROMOTER_DIFF_ROOT/bundle.py" models Carbon-500M hyenadna-large-1m-seqlen python "$PROMOTER_DIFF_ROOT/bundle.py" models NTv3_100M_preGaussian/learned encoders do not require downloaded model weights.
Download MMseqs2 for training-similarity evaluation. On Linux x86_64 with SSE4.1 support, install the official CPU binary without administrator access:
mkdir -p "$HOME/install" curl -fL https://mmseqs.com/latest/mmseqs-linux-sse41.tar.gz \ -o "$HOME/install/mmseqs-linux-sse41.tar.gz" tar -xzf "$HOME/install/mmseqs-linux-sse41.tar.gz" -C "$HOME/install" export PATH="$HOME/install/mmseqs/bin:$PATH" mmseqs versionThis matches the project's default executable path. For other platforms or CPU builds, follow the official MMseqs2 installation instructions. The Gosai reference database is already included; no database download or rebuild is required for the bundled reference.
Set the paths and credentials for your run. Export
PROMOTER_DIFF_ROOTand the MMseqsPATHabove in each shell or cluster job, and activate the code environment. For Carbon evaluation, overridemetrics.1.options.weights_dir="$PROMOTER_DIFF_ROOT/model_weights". The pretrained MPRA oracle is included atmodel_weights/gosai_oracle/oracle-10-935.ckpt; no separate download is needed. When using the Gosai validation metrics, passval_metrics.0.options.checkpoint_path="$PROMOTER_DIFF_ROOT/model_weights/gosai_oracle/oracle-10-935.ckpt".Run
wandb loginfor training logging, or usetrainer.dry_run=trueto disable logging (this does not shorten training).
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