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mne-tools/mne-python
mne/preprocessing/ecg.py
9
15061
# Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr> # Denis Engemann <denis.engemann@gmail.com> # Eric Larson <larson.eric.d@gmail.com> # # License: BSD-3-Clause import numpy as np from ..annotations import _annotations_starts_stops from ..utils import logger, verbose, sum_squared, warn, int...
bsd-3-clause
bf387dc0a62472a02cd9cb6dcf8e3989
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79
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false
false
false
false
ergo/ziggurat_foundations
ziggurat_foundations/models/resource.py
1
3700
# -*- coding: utf-8 -*- from __future__ import unicode_literals import sqlalchemy as sa from sqlalchemy.ext.declarative import declared_attr from ziggurat_foundations.exc import ZigguratException from ziggurat_foundations.models.base import BaseModel __all__ = ["ResourceMixin"] class ResourceMixin(BaseModel): ...
bsd-3-clause
fee78a4d64d2724612683a69c5b0ba80
27.682171
82
0.585135
4.32243
false
false
false
false
mne-tools/mne-python
mne/viz/tests/test_misc.py
5
11961
# Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr> # Denis Engemann <denis.engemann@gmail.com> # Martin Luessi <mluessi@nmr.mgh.harvard.edu> # Eric Larson <larson.eric.d@gmail.com> # Cathy Nangini <cnangini@gmail.com> # Mainak Jas <mainak@neuro.hut.fi> # # License: ...
bsd-3-clause
5b66ac64c50a92842d921704befbaaad
40.675958
79
0.613745
3.233577
false
true
false
false
mne-tools/mne-python
mne/preprocessing/tests/test_ssp.py
8
8256
import os.path as op import pytest from numpy.testing import assert_array_almost_equal import numpy as np from mne.io import read_raw_fif, read_raw_ctf from mne.io.proj import make_projector, activate_proj from mne.preprocessing.ssp import compute_proj_ecg, compute_proj_eog from mne.datasets import testing from mne i...
bsd-3-clause
b431f20ea29ffc9ee6c7c56f9b7783e6
42.225131
79
0.608164
3.017544
false
true
false
false
mne-tools/mne-python
mne/datasets/eegbci/eegbci.py
6
7470
# Author: Martin Billinger <martin.billinger@tugraz.at> # Adam Li <adam2392@gmail.com> # Daniel McCloy <dan@mccloy.info> # License: BSD Style. import os from os import path as op import pkg_resources import re from pathlib import Path from ..utils import _get_path, _do_path_update from ...utils import...
bsd-3-clause
e94589c3f4be7d17570cbb1fb436c2a0
32.648649
116
0.613655
3.663561
false
false
false
false
mne-tools/mne-python
tutorials/raw/10_raw_overview.py
9
26059
# -*- coding: utf-8 -*- """ .. _tut-raw-class: ======================================= The Raw data structure: continuous data ======================================= This tutorial covers the basics of working with raw EEG/MEG data in Python. It introduces the :class:`~mne.io.Raw` data structure in detail, including ...
bsd-3-clause
4127bded636dee736daba98ee4a95ed7
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79
0.647987
3.404289
false
false
false
false
mne-tools/mne-python
mne/io/hitachi/hitachi.py
3
12389
# Authors: Eric Larson <larson.eric.d@gmail.com> # # License: BSD-3-Clause import datetime as dt import re import numpy as np from ..base import BaseRaw from ..constants import FIFF from ..meas_info import create_info, _merge_info from ..nirx.nirx import _read_csv_rows_cols from ..utils import _mult_cal_one from ......
bsd-3-clause
f0c6e5a5bb844787bf900c70245a0b2f
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0.488821
3.736128
false
false
false
false
mne-tools/mne-python
mne/viz/topo.py
1
39390
"""Functions to plot M/EEG data on topo (one axes per channel).""" # Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr> # Denis Engemann <denis.engemann@gmail.com> # Martin Luessi <mluessi@nmr.mgh.harvard.edu> # Eric Larson <larson.eric.d@gmail.com> # # License: Simplified BSD from c...
bsd-3-clause
a3f97a57e2ca7b81397540154dab7bef
40.461053
79
0.578831
3.600037
false
false
false
false
mne-tools/mne-python
mne/preprocessing/nirs/tests/test_scalp_coupling_index.py
10
2725
# Authors: Robert Luke <mail@robertluke.net> # Eric Larson <larson.eric.d@gmail.com> # Alexandre Gramfort <alexandre.gramfort@inria.fr> # # License: BSD-3-Clause import os.path as op import pytest import numpy as np from numpy.testing import assert_allclose, assert_array_less from mne.datasets.test...
bsd-3-clause
9d01d1e397dac8a9ea69a49e2cf9e17e
34.855263
75
0.625688
2.945946
false
true
false
false
mne-tools/mne-python
mne/misc.py
11
2970
# Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr> # Scott Burns <sburns@nmr.mgh.harvard.edu> # # License: BSD-3-Clause def parse_config(fname): """Parse a config file (like .ave and .cov files). Parameters ---------- fname : str Config file name. Returns ------- ...
bsd-3-clause
4daa7b0d6e9ff578a720e2ec6d6127db
28.405941
79
0.506061
3.740554
false
false
false
false
mne-tools/mne-python
examples/decoding/decoding_spoc_CMC.py
9
3006
# -*- coding: utf-8 -*- """ .. _ex-spoc-cmc: ==================================== Continuous Target Decoding with SPoC ==================================== Source Power Comodulation (SPoC) :footcite:`DahneEtAl2014` allows to identify the composition of orthogonal spatial filters that maximally correlate with a contin...
bsd-3-clause
eb45d7d343835bfb98c3d8c738b8e8bb
31.322581
78
0.672655
3.15425
false
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mne-tools/mne-python
mne/io/snirf/_snirf.py
3
21426
# Authors: Robert Luke <mail@robertluke.net> # # License: BSD-3-Clause import re import numpy as np import datetime from ..base import BaseRaw from ..meas_info import create_info, _format_dig_points from ..utils import _mult_cal_one from ...annotations import Annotations from ...utils import (logger, verbose, fill_do...
bsd-3-clause
a0516e79e20bf4410663ad8f9401647a
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mne-tools/mne-python
examples/time_frequency/time_frequency_erds.py
5
8095
# -*- coding: utf-8 -*- """ .. _ex-tfr-erds: =============================== Compute and visualize ERDS maps =============================== This example calculates and displays ERDS maps of event-related EEG data. ERDS (sometimes also written as ERD/ERS) is short for event-related desynchronization (ERD) and event-r...
bsd-3-clause
5ae2aa4b2e1076ba1d8b48eb61265f50
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mne-tools/mne-python
mne/channels/interpolation.py
8
8836
# Authors: Denis Engemann <denis.engemann@gmail.com> # # License: BSD-3-Clause import numpy as np from numpy.polynomial.legendre import legval from ..utils import logger, warn, verbose from ..io.meas_info import _simplify_info from ..io.pick import pick_types, pick_channels, pick_info from ..surface import _normalize...
bsd-3-clause
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mne-tools/mne-python
mne/viz/_mpl_figure.py
1
101757
# -*- coding: utf-8 -*- """Figure classes for MNE-Python's 2D plots. Class Hierarchy --------------- MNEFigParams Container object, attached to MNEFigure by default. Sets close_key='escape' plus whatever other key-value pairs are passed to its constructor. matplotlib.figure.Figure ...
bsd-3-clause
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false
false
false
false
mne-tools/mne-python
mne/time_frequency/tfr.py
1
103760
"""A module which implements the time-frequency estimation. Morlet code inspired by Matlab code from Sheraz Khan & Brainstorm & SPM """ # Authors : Alexandre Gramfort <alexandre.gramfort@inria.fr> # Hari Bharadwaj <hari@nmr.mgh.harvard.edu> # Clement Moutard <clement.moutard@polytechnique.org> # ...
bsd-3-clause
fb1ce74d8882f16db262973bcd88b502
38.361533
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false
false
false
false
mne-tools/mne-python
mne/io/tests/test_raw.py
3
36397
# -*- coding: utf-8 -*- """Generic tests that all raw classes should run.""" # Authors: MNE Developers # Stefan Appelhoff <stefan.appelhoff@mailbox.org> # # License: BSD-3-Clause from contextlib import redirect_stdout from io import StringIO import math import os from os import path as op from pathlib import ...
bsd-3-clause
fe1fc607c7ad500d7460534c8acbab06
40.031567
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0.578019
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false
true
false
false
mne-tools/mne-python
mne/decoding/ems.py
8
7630
# Author: Denis Engemann <denis.engemann@gmail.com> # Alexandre Gramfort <alexandre.gramfort@inria.fr> # Jean-Remi King <jeanremi.king@gmail.com> # # License: BSD-3-Clause from collections import Counter import numpy as np from .mixin import TransformerMixin, EstimatorMixin from .base import _set_cv ...
bsd-3-clause
9452dc5ce0ac6f0708c43372ef297a95
34.16129
79
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false
false
false
false
mne-tools/mne-python
mne/viz/backends/_pyvista.py
1
46684
""" Core visualization operations based on PyVista. Actual implementation of _Renderer and _Projection classes. """ # Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr> # Eric Larson <larson.eric.d@gmail.com> # Guillaume Favelier <guillaume.favelier@gmail.com> # Joan Massich <mailsik...
bsd-3-clause
4038c0f13df4a226bfbaab566cb7efc3
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79
0.577628
3.983276
false
false
false
false
mne-tools/mne-python
mne/preprocessing/ica.py
1
125844
# -*- coding: utf-8 -*- # # Authors: Denis A. Engemann <denis.engemann@gmail.com> # Alexandre Gramfort <alexandre.gramfort@inria.fr> # Juergen Dammers <j.dammers@fz-juelich.de> # # License: BSD-3-Clause from inspect import isfunction, signature, Parameter from collections import namedtuple from colle...
bsd-3-clause
6c4f85073d376df5bb9ea1cd3ce65695
40.558785
126
0.575707
3.928694
false
false
false
false
mne-tools/mne-python
examples/visualization/montage_sgskip.py
11
2070
# -*- coding: utf-8 -*- """ .. _plot_montage: Plotting sensor layouts of EEG systems ====================================== This example illustrates how to load all the EEG system montages shipped in MNE-python, and display it on the fsaverage template subject. """ # noqa: D205, D400 # Authors: Alexandre Gramfort <a...
bsd-3-clause
0b93e0fb1d2b5a65ca0fd9fe14342831
31.34375
77
0.675362
2.982709
false
false
false
false
mne-tools/mne-python
mne/minimum_norm/_eloreta.py
11
7270
# Authors: Eric Larson <larson.eric.d@gmail.com> # # License: BSD-3-Clause from functools import partial import numpy as np from ..defaults import _handle_default from ..fixes import _safe_svd from ..utils import warn, logger, sqrtm_sym, eigh # For the reference implementation of eLORETA (force_equal=False), # 0 < ...
bsd-3-clause
72001142b8916120b5cc32a72e911959
37.670213
78
0.579505
3.136324
false
false
false
false
mne-tools/mne-python
mne/viz/_brain/_brain.py
1
153848
# Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr> # Eric Larson <larson.eric.d@gmail.com> # Oleh Kozynets <ok7mailbox@gmail.com> # Guillaume Favelier <guillaume.favelier@gmail.com> # jona-sassenhagen <jona.sassenhagen@gmail.com> # Joan Massich <mailsik@gmail.com> #...
bsd-3-clause
b091a37be9c766a2ae58026eee2d88c3
39.715042
79
0.511506
4.101264
false
false
false
false
mattpap/sympy-polys
sympy/core/evalf.py
1
38790
""" Adaptive numerical evaluation of SymPy expressions, using mpmath for mathematical functions. """ from sympy.mpmath.libmp import (from_int, from_rational, fzero, normalize, bitcount, round_nearest, to_str, fone, fnone, fhalf, to_int, mpf_lt, mpf_sqrt, mpf_cmp, mpf_abs, mpf_pow_int, mpf_shift, mpf_ad...
bsd-3-clause
1dcfe321787f1983986b7cd72aed6945
33.541407
99
0.542588
3.501219
false
false
false
false
mattpap/sympy-polys
sympy/core/sympify.py
1
4396
"""sympify -- convert objects SymPy internal format""" from types import NoneType from inspect import getmro from core import BasicMeta class SympifyError(ValueError): def __init__(self, expr, base_exc=None): self.expr = expr self.base_exc = base_exc def __str__(self): if self.base_ex...
bsd-3-clause
6117cc0b0a8086f6c8b2e1f257815319
27.921053
162
0.6101
4.112254
false
false
false
false
mattpap/sympy-polys
sympy/printing/pretty/pretty_symbology.py
5
13716
"""Symbolic primitives + unicode/ASCII abstraction for pretty.py""" import sys warnings = '' # first, setup unicodedate environment try: import unicodedata # Python2.4 unicodedata misses some symbols, like subscript 'i', etc, # and we still want SymPy to be fully functional under Python2.4 if sys.he...
bsd-3-clause
78e659233c37802ce8c0ab6580e86c9f
26.597586
95
0.493584
3.189026
false
false
false
false
mattpap/sympy-polys
sympy/mpmath/tests/test_interval.py
1
15390
from sympy.mpmath import * def test_interval_identity(): iv.dps = 15 assert mpi(2) == mpi(2, 2) assert mpi(2) != mpi(-2, 2) assert not (mpi(2) != mpi(2, 2)) assert mpi(-1, 1) == mpi(-1, 1) assert str(mpi('0.1')) == "[0.099999999999999991673, 0.10000000000000000555]" assert repr(mpi('0.1')) ...
bsd-3-clause
15d60cfd3185a533c3d8d0998dcc9013
38.664948
116
0.518778
2.268573
false
false
false
false
mattpap/sympy-polys
sympy/thirdparty/pyglet/pyglet/graphics/vertexdomain.py
5
28839
# ---------------------------------------------------------------------------- # pyglet # Copyright (c) 2006-2008 Alex Holkner # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions # are met: # # * Redistribu...
bsd-3-clause
432292064e09b6dbee601de8c1383751
36.068123
79
0.598911
4.317216
false
false
false
false
mattpap/sympy-polys
sympy/polys/tests/test_specialpolys.py
2
2492
"""Tests for functions for generating interesting polynomials. """ from sympy import Poly, ZZ, raises from sympy.polys.specialpolys import ( swinnerton_dyer_poly, cyclotomic_poly, symmetric_poly, fateman_poly_F_1, dmp_fateman_poly_F_1, fateman_poly_F_2, dmp_fateman_poly_F_2, fateman_po...
bsd-3-clause
da1d49048b299090ae930c923e81bad2
28.666667
83
0.574639
2.223015
false
true
false
false
mattpap/sympy-polys
sympy/thirdparty/pyglet/pyglet/gl/glext_missing.py
11
5393
# ---------------------------------------------------------------------------- # pyglet # Copyright (c) 2006-2008 Alex Holkner # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions # are met: # # * Redistribu...
bsd-3-clause
6e820e2383e401386f2eb66108f678a3
41.464567
81
0.67124
3.206302
false
false
false
false
mattpap/sympy-polys
sympy/ntheory/factor_.py
1
17811
""" Integer factorization """ from sympy.core import Mul from sympy.core.numbers import igcd from sympy.core.power import integer_nthroot, Pow from sympy.core.mul import Mul import random import math from primetest import isprime from generate import sieve, primerange from sympy.utilities.iterables import iff from sym...
bsd-3-clause
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84
0.55971
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false
false
false
false
mattpap/sympy-polys
examples/intermediate/vandermonde.py
10
4661
#!/usr/bin/env python """Vandermonde matrix example Demonstrates matrix computations using the Vandermonde matrix. * http://en.wikipedia.org/wiki/Vandermonde_matrix """ from sympy import Matrix, pprint, Rational, sqrt, symbols, Symbol, zeros def symbol_gen(sym_str): """Symbol generator Generates sym_str_n...
bsd-3-clause
ea47951ae5307503cf4bbff374bcb760
27.078313
82
0.525209
3.230076
false
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false
false
mattpap/sympy-polys
sympy/mpmath/identification.py
3
28881
""" Implements the PSLQ algorithm for integer relation detection, and derivative algorithms for constant recognition. """ from libmp import int_types, sqrt_fixed # round to nearest integer (can be done more elegantly...) def round_fixed(x, prec): return ((x + (1<<(prec-1))) >> prec) << prec class IdentificationM...
bsd-3-clause
2d38286cb6940644ca39129b7a2a7445
33.382143
84
0.529414
3.186342
false
false
false
false
mattpap/sympy-polys
sympy/concrete/products.py
1
3802
from sympy.core import Expr, S, C, Mul, sympify from sympy.polys import quo, roots from sympy.simplify import powsimp class Product(Expr): """Represents unevaluated product. """ def __new__(cls, term, *symbols, **assumptions): term = sympify(term) if term.is_Number: if term i...
bsd-3-clause
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0.468175
3.907503
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mattpap/sympy-polys
sympy/core/core.py
1
7710
""" The core's core. """ from assumptions import AssumeMeths, make__get_assumption # used for canonical ordering of symbolic sequences # via __cmp__ method: # FIXME this is *so* irrelevant and outdated! ordering_of_classes = [ # singleton numbers 'Zero', 'One','Half','Infinity','NaN','NegativeOne','NegativeIn...
bsd-3-clause
b18d496ee917142daff688a2b13f765b
29.474308
85
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3.814943
false
false
false
false
mattpap/sympy-polys
sympy/thirdparty/pyglet/pyglet/media/drivers/directsound/__init__.py
5
13783
# ---------------------------------------------------------------------------- # pyglet # Copyright (c) 2006-2008 Alex Holkner # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions # are met: # # * Redistribu...
bsd-3-clause
e319dce1b4e747465297b0fd945dda5d
33.982234
80
0.595952
3.812725
false
false
false
false
mattpap/sympy-polys
sympy/thirdparty/pyglet/pyglet/window/xlib/xinerama.py
7
4022
# ---------------------------------------------------------------------------- # pyglet # Copyright (c) 2006-2008 Alex Holkner # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions # are met: # # * Redistribu...
bsd-3-clause
329b497c17eaa4d2ae69885c7b32ca4e
34.910714
84
0.702636
3.549868
false
false
false
false
mattpap/sympy-polys
sympy/printing/tests/test_conventions.py
13
1648
from sympy import symbols from sympy.printing.conventions import split_super_sub def test_super_sub(): assert split_super_sub("beta_13_2") == ("beta", [], ["13","2"]) assert split_super_sub("beta_132_20") == ("beta", [], ["132","20"]) assert split_super_sub("beta_13") == ("beta", [], ["13"]) assert spl...
bsd-3-clause
a41c7b0a40ed07476e8e6b0bcd448fc9
60.037037
75
0.456917
2.53149
false
false
false
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mattpap/sympy-polys
sympy/functions/special/bsplines.py
2
4632
from sympy.core.basic import Basic, S, C, sympify from sympy.core.function import expand from sympy.functions import Piecewise, piecewise_fold from sympy.functions.elementary.piecewise import ExprCondPair from sympy.core.sets import Interval def _add_splines(c, b1, d, b2): """Construct c*b1 + d*b2.""" if b1 =...
bsd-3-clause
c0b757d38d2b6bb5924c29070659e156
35.1875
215
0.552893
2.815805
false
false
false
false
mattpap/sympy-polys
sympy/thirdparty/pyglet/pyglet/window/xlib/__init__.py
5
59054
# ---------------------------------------------------------------------------- # pyglet # Copyright (c) 2006-2008 Alex Holkner # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions # are met: # # * Redistribu...
bsd-3-clause
af55512565ad56b4018f0cfb45a217e6
38.212483
80
0.563247
3.931691
false
false
false
false
mattpap/sympy-polys
sympy/mpmath/functions/functions.py
1
11974
class SpecialFunctions(object): """ This class implements special functions using high-level code. Elementary and some other functions (e.g. gamma function, basecase hypergeometric series) are assumed to be predefined by the context as "builtins" or "low-level" functions. """ defined_functi...
bsd-3-clause
9f2af02019693eddd8877e72177a0fbe
26.090498
84
0.52756
2.991257
false
false
false
false
mattpap/sympy-polys
sympy/polys/tests/test_galoistools.py
2
22630
from sympy.polys.galoistools import ( gf_crt, gf_crt1, gf_crt2, gf_int, gf_degree, gf_strip, gf_trunc, gf_normal, gf_from_dict, gf_to_dict, gf_from_int_poly, gf_to_int_poly, gf_neg, gf_add_ground, gf_sub_ground, gf_mul_ground, gf_exquo_ground, gf_add, gf_sub, gf_add_mul, gf_sub_mul, gf_mul, gf_...
bsd-3-clause
d27847e79cc091aeff274a10258a24f9
32.133236
79
0.456606
2.198795
false
false
false
false
mattpap/sympy-polys
sympy/polys/groebnertools.py
3
16634
"""Sparse distributed multivariate polynomials and Groebner bases. """ from sympy.polys.monomialtools import ( monomial_mul, monomial_div, monomial_lcm, monomial_lex_cmp as O_lex, monomial_grlex_cmp as O_grlex, monomial_grevlex_cmp as O_grevlex, ) from sympy.polys.polyerrors import ( Exact...
bsd-3-clause
ccc2c22c802603cb64c72f14bc13ece5
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mattpap/sympy-polys
sympy/thirdparty/pyglet/pyglet/image/codecs/png.py
39
3777
# ---------------------------------------------------------------------------- # pyglet # Copyright (c) 2006-2008 Alex Holkner # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions # are met: # # * Redistribu...
bsd-3-clause
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33.336364
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mattpap/sympy-polys
sympy/polys/tests/test_polyroots.py
2
9365
from sympy import S, symbols, Symbol, Integer, Rational, \ sqrt, I, raises, powsimp, Lambda from sympy.polys import Poly from sympy.polys.polyroots import root_factors, roots_linear, \ roots_quadratic, roots_cubic, roots_quartic, roots_binomial, \ roots_rational, roots, number_of_real_roots, RootOf, Roo...
bsd-3-clause
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2.21029
false
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mattpap/sympy-polys
sympy/logic/algorithms/dpll.py
1
9083
"""Implementation of DPLL algorithm Further improvements: eliminate calls to pl_true, implement branching rules, efficient unit propagation. References: - http://en.wikipedia.org/wiki/DPLL_algorithm - http://bioinformatics.louisville.edu/ouyang/MingOuyangThesis.pdf """ from sympy.core import Symbol from sympy.log...
bsd-3-clause
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mattpap/sympy-polys
sympy/ntheory/partitions_.py
10
2851
from sympy.mpmath.libmp import (fzero, from_man_exp, from_int, from_rational, fone, fhalf, bitcount, to_int, to_str, mpf_mul, mpf_div, mpf_sub, mpf_add, mpf_sqrt, mpf_pi, mpf_cosh_sinh, pi_fixed, mpf_cos) from sympy.core.numbers import igcd import math def A(n, j, prec): """Compute the inner sum in the...
bsd-3-clause
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0.558401
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mattpap/sympy-polys
sympy/mpmath/rational.py
1
5145
import operator from libmp import int_types, mpf_hash, bitcount new = object.__new__ def create_reduced(p, q, _cache={}): key = p, q if key in _cache: return _cache[key] x, y = p, q while y: x, y = y, x % y if x != 1: p //= x q //= x v = new(mpq) v._mpq_ = p...
bsd-3-clause
ffca761862985597035cbb9379e50714
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mattpap/sympy-polys
sympy/thirdparty/pyglet/pyglet/media/avbin.py
5
16893
# ---------------------------------------------------------------------------- # pyglet # Copyright (c) 2006-2008 Alex Holkner # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions # are met: # # * Redistribu...
bsd-3-clause
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34.415094
120
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false
false
false
false
mattpap/sympy-polys
sympy/thirdparty/pyglet/pyglet/font/freetype_lib.py
5
14036
# ---------------------------------------------------------------------------- # pyglet # Copyright (c) 2006-2008 Alex Holkner # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions # are met: # # * Redistribu...
bsd-3-clause
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mattpap/sympy-polys
sympy/mpmath/libmp/libmpf.py
3
42867
""" Low-level functions for arbitrary-precision floating-point arithmetic. """ __docformat__ = 'plaintext' import math from bisect import bisect # Importing random is slow #from random import getrandbits getrandbits = None from backend import (MPZ, MPZ_TYPE, MPZ_ZERO, MPZ_ONE, MPZ_TWO, MPZ_FIVE, BACKEND, STRIC...
bsd-3-clause
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mattpap/sympy-polys
sympy/simplify/tests/test_simplify.py
1
19954
from sympy import Symbol, symbols, together, hypersimp, factorial, binomial, \ collect, Function, powsimp, separate, sin, exp, Rational, fraction, \ simplify, trigsimp, cos, tan, cot, log, ratsimp, Matrix, pi, integrate, \ solve, nsimplify, GoldenRatio, sqrt, E, I, sympify, atan, Derivative, \ ...
bsd-3-clause
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mattpap/sympy-polys
sympy/thirdparty/pyglet/pyglet/window/carbon/types.py
7
4141
# ---------------------------------------------------------------------------- # pyglet # Copyright (c) 2006-2008 Alex Holkner # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions # are met: # # * Redistribu...
bsd-3-clause
1dc021deec179d38f7028c69fa78fc73
25.044025
78
0.639459
3.622922
false
false
false
false
mattpap/sympy-polys
sympy/mpmath/libmp/libelefun.py
1
43291
""" This module implements computation of elementary transcendental functions (powers, logarithms, trigonometric and hyperbolic functions, inverse trigonometric and hyperbolic) for real floating-point numbers. For complex and interval implementations of the same functions, see libmpc and libmpi. """ import math from...
bsd-3-clause
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83
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mattpap/sympy-polys
sympy/ntheory/residue.py
4
1679
from sympy.core.numbers import igcd from primetest import isprime def totient_(n): """returns the number of integers less than n and relatively prime to n""" if n < 1: raise ValueError("n must be a positive integer") tot=0 for x in xrange(1,n): if igcd(x,n)==1: tot+=1 ...
bsd-3-clause
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mattpap/sympy-polys
sympy/polys/monomialtools.py
2
5819
"""Tools and arithmetics for monomials of distributed polynomials. """ from sympy.core.mul import Mul from sympy.core.basic import S from sympy.functions import factorial from sympy.utilities import all, any from sympy.utilities import cythonized def monomials(variables, degree): """Generate a set of monomials ...
bsd-3-clause
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mattpap/sympy-polys
sympy/functions/combinatorial/factorials.py
2
12073
from sympy.core.basic import S, C, sympify from sympy.core.function import Function from sympy.ntheory import sieve from math import sqrt ############################################################################### ######################## FACTORIAL and MULTI-FACTORIAL ######################## #####################...
bsd-3-clause
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mattpap/sympy-polys
sympy/utilities/pkgdata.py
12
1759
""" pkgdata is a simple, extensible way for a package to acquire data file resources. The getResource function is equivalent to the standard idioms, such as the following minimal implementation:: import sys, os def getResource(identifier, pkgname=__name__): pkgpath = os.path.dirname(sys.modules[pkgna...
bsd-3-clause
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31.574074
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false
false
false
wtforms/wtforms
tests/validators/test_optional.py
1
1185
import pytest from wtforms.validators import optional from wtforms.validators import StopValidation def test_input_optional_passes(dummy_form, dummy_field): """ optional should pause with given values """ validator = optional() dummy_field.data = "foobar" dummy_field.raw_data = ["foobar"] ...
bsd-3-clause
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wtforms/wtforms
tests/test_locale_babel.py
1
2853
from decimal import Decimal from decimal import ROUND_UP import pytest from tests.common import DummyPostData from wtforms import Form from wtforms.fields import DecimalField from wtforms.utils import unset_value class TestLocaleDecimal: class F(Form): class Meta: locales = ["hi_IN", "en_US"...
bsd-3-clause
2de1b693feee81957ca74422f2c3d9ab
33.301205
82
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3.549875
false
true
false
false
nteract/papermill
docs/conf.py
1
5193
#!/usr/bin/env python3 # -*- coding: utf-8 -*- # # papermill documentation build configuration file, created by # sphinx-quickstart on Mon Jan 15 09:50:01 2018. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # ...
bsd-3-clause
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nteract/papermill
papermill/clientwrap.py
1
4348
import sys import asyncio from nbclient import NotebookClient from nbclient.exceptions import CellExecutionError from traitlets import Bool, Instance class PapermillNotebookClient(NotebookClient): """ Module containing a that executes the code cells and updates outputs """ log_output = Bool(Fal...
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datreant/datreant
src/datreant/tests/test_collections.py
3
49853
"""Tests for Bundle. """ import numpy as np import pytest import datreant as dtr def do_stuff(treant): return treant.name def return_nothing(treant): b = treant.name class CollectionsTests(object): """Mixin tests for collections""" def test_parents(self, collection, tmpdir): with tmpdi...
bsd-3-clause
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datreant/datreant
src/datreant/selectionparser.py
1
2710
from pyparsing import (CaselessLiteral, Word, quotedString, removeQuotes, infix_notation, opAssoc, stringEnd, ParseException) __all__ = ['parse_selection'] class UnaryOperation(object): def __init__(self, t): self.op, self.a = t[0] class BinaryOperation(obj...
bsd-3-clause
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fredrik-johansson/mpmath
mpmath/tests/test_fp.py
15
89997
""" Easy-to-use test-generating code: cases = ''' exp 2.25 log 2.25 ''' from mpmath import * mp.dps = 20 for test in cases.splitlines(): if not test: continue words = test.split() fname = words[0] args = words[1:] argstr = ", ".join(args) testline = "%s(%s)" % (fname, argstr) ans =...
bsd-3-clause
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52.858169
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fredrik-johansson/mpmath
mpmath/matrices/linalg.py
1
26958
""" Linear algebra -------------- Linear equations ................ Basic linear algebra is implemented; you can for example solve the linear equation system:: x + 2*y = -10 3*x + 4*y = 10 using ``lu_solve``:: >>> from mpmath import * >>> mp.pretty = False >>> A = matrix([[1, 2], [3, 4]]) ...
bsd-3-clause
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fredrik-johansson/mpmath
mpmath/functions/orthogonal.py
15
16097
from .functions import defun, defun_wrapped def _hermite_param(ctx, n, z, parabolic_cylinder): """ Combined calculation of the Hermite polynomial H_n(z) (and its generalization to complex n) and the parabolic cylinder function D. """ n, ntyp = ctx._convert_param(n) z = ctx.convert(z) q ...
bsd-3-clause
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31.651116
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false
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fredrik-johansson/mpmath
mpmath/calculus/approximation.py
9
8817
from ..libmp.backend import xrange from .calculus import defun #----------------------------------------------------------------------------# # Approximation methods # #----------------------------------------------------------------------------# # The Chebyshev ap...
bsd-3-clause
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fredrik-johansson/mpmath
mpmath/tests/test_matrices.py
1
7944
import pytest import sys from mpmath import * def test_matrix_basic(): A1 = matrix(3) for i in range(3): A1[i,i] = 1 assert A1 == eye(3) assert A1 == matrix(A1) A2 = matrix(3, 2) assert not A2._matrix__data A3 = matrix([[1, 2, 3], [4, 5, 6], [7, 8, 9]]) assert list(A3) == list(r...
bsd-3-clause
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fredrik-johansson/mpmath
mpmath/tests/test_functions2.py
2
96990
import math import pytest from mpmath import * def test_bessel(): mp.dps = 15 assert j0(1).ae(0.765197686557966551) assert j0(pi).ae(-0.304242177644093864) assert j0(1000).ae(0.0247866861524201746) assert j0(-25).ae(0.0962667832759581162) assert j1(1).ae(0.440050585744933516) assert j1(pi)....
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fatiando/fatiando
cookbook/seismic_wavefd_rayleigh_wave.py
9
2865
""" Seismic: 2D finite difference simulation of elastic P and SV wave propagation in a medium with a discontinuity (i.e., Moho), generating Rayleigh waves """ import numpy as np from matplotlib import animation from fatiando import gridder from fatiando.seismic import wavefd from fatiando.vis import mpl # Set the para...
bsd-3-clause
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fatiando/fatiando
fatiando/gridder/point_generation.py
6
6022
""" Generate points on a map as regular grids or points scatters. """ from __future__ import division, absolute_import, print_function import numpy as np def _check_area(area): """ Check that the area argument is valid. For example, the west limit should not be greater than the east limit. """ x1,...
bsd-3-clause
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fatiando/fatiando
fatiando/gravmag/sphere.py
5
27981
r""" The potential fields of a homogeneous sphere. """ from __future__ import division, absolute_import import numpy as np from ..constants import SI2MGAL, G, CM, T2NT, SI2EOTVOS from .. import utils from .._our_duecredit import due, Doi due.cite(Doi("10.1017/CBO9780511549816"), description='Forward modeli...
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fatiando/fatiando
cookbook/seismic_profile_vertical.py
7
1802
""" Seismic: Invert vertical seismic profile (VSP) traveltimes for the velocity of a layered model. """ import numpy from fatiando import utils from fatiando.seismic.profile import layered_straight_ray, LayeredStraight from fatiando.inversion.regularization import Damping from fatiando.vis import mpl # The limits in v...
bsd-3-clause
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fatiando/fatiando
fatiando/gravmag/euler.py
6
14010
# coding: utf-8 """ Euler deconvolution methods for potential fields. * :class:`~fatiando.gravmag.euler.EulerDeconv`: The classic 3D solution to Euler's equation for potential fields (Reid et al., 1990). Runs on the whole dataset. * :class:`~fatiando.gravmag.euler.EulerDeconvEW`: Run Euler deconvolution on an e...
bsd-3-clause
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fatiando/fatiando
fatiando/mesher/geometry.py
6
16438
""" Defines geometric primitives like prisms, spheres, etc. """ from __future__ import division, absolute_import from future.builtins import object, super import copy as cp import numpy as np class GeometricElement(object): """ Base class for all geometric elements. """ def __init__(self, props): ...
bsd-3-clause
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fatiando/fatiando
fatiando/_our_duecredit.py
6
1984
# pylint: skip-file # emacs: at the end of the file # ex: set sts=4 ts=4 sw=4 et: # ## ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### # """ Stub file for a guaranteed safe import of duecredit constructs: if duecredit is not available. To use it, place it into your project codebase to be impo...
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fatiando/fatiando
cookbook/gravmag_transform_rtp.py
9
1569
""" GravMag: Reduction to the pole of a total field anomaly using FFT """ from fatiando import mesher, gridder, utils from fatiando.gravmag import prism, transform from fatiando.vis import mpl # Direction of the Geomagnetic field inc, dec = -60, 0 # Make a model with only induced magnetization model = [mesher.Prism(-1...
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fatiando/fatiando
fatiando/mesher/mesh.py
6
32852
""" Meshes (collections) of geometric objects. Meshes behave like lists/arrays of geometric objects (they are iterables). """ from __future__ import division, absolute_import from future.builtins import range, object, super import numpy as np import scipy.special import scipy.interpolate import copy as cp from .. imp...
bsd-3-clause
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desihub/desisim
py/desisim/quickcat.py
1
28069
''' desisim.quickcat ================ Code for quickly generating an output zcatalog given fiber assignment tiles, a truth catalog, and optionally a previous zcatalog. ''' from __future__ import absolute_import, division, print_function import os import yaml from collections import Counter from pkg_resources import ...
bsd-3-clause
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desihub/desisim
py/desisim/qso_template/qso_pca.py
1
4895
""" desisim.qso_template.qso_pca ============================ Module for generate QSO PCA templates 24-Nov-2014 by JXP """ from __future__ import print_function, absolute_import, division import numpy as np import os import multiprocessing as mp from astropy.io import fits flg_xdb = True try: from xastropy.xuti...
bsd-3-clause
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desihub/desisim
py/desisim/transients.py
1
24932
"""Module for defining interface to transient models. """ from abc import ABC, abstractmethod from astropy import units as u import numpy as np from desiutil.log import get_logger, DEBUG # Hide sncosmo import from the module. try: import sncosmo log = get_logger(DEBUG) log.info('Enabling sncosmo models.'...
bsd-3-clause
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desihub/desisim
py/desisim/archetypes.py
1
5024
""" desisim.archetypes ================== Archetype routines for desisim. """ from __future__ import absolute_import, division, print_function import os import numpy as np from desiutil.log import get_logger log = get_logger() def compute_chi2(flux, ferr=None): """Compute the chi2 distance matrix. Parame...
bsd-3-clause
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desihub/desisim
py/desisim/bal.py
1
5869
""" desisim.bal =========== Functions and methods for inserting BALs into QSO spectra. """ from __future__ import division, print_function import numpy as np class BAL(object): """Base class for inserting BALs into (input) QSO spectra.""" def __init__(self): """Read and cache the BAL template set. ...
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metoppv/improver
improver/spotdata/spot_extraction.py
3
16425
# -*- coding: utf-8 -*- # ----------------------------------------------------------------------------- # (C) British Crown copyright. The Met Office. # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are me...
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metoppv/improver
improver/cli/construct_reliability_tables.py
3
4678
#!/usr/bin/env python # -*- coding: utf-8 -*- # ----------------------------------------------------------------------------- # (C) British Crown copyright. The Met Office. # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the follo...
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metoppv/improver
improver/psychrometric_calculations/cloud_condensation_level.py
2
5584
# -*- coding: utf-8 -*- # ----------------------------------------------------------------------------- # (C) British Crown copyright. The Met Office. # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are me...
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metoppv/improver
improver/utilities/interpolation.py
3
9823
# -*- coding: utf-8 -*- # ----------------------------------------------------------------------------- # (C) British Crown copyright. The Met Office. # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are me...
bsd-3-clause
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metoppv/improver
improver/psychrometric_calculations/cloud_top_temperature.py
1
6910
# -*- coding: utf-8 -*- # ----------------------------------------------------------------------------- # (C) British Crown copyright. The Met Office. # All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are me...
bsd-3-clause
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