reference stringlengths 7 774 ⌀ | aptamer_chemistry stringclasses 21
values | aptamer_name stringlengths 1 164 | target_name stringlengths 2 1.2k ⌀ | aptamer_sequence stringlengths 2 380 | origin stringclasses 6
values | target_chemistry stringclasses 11
values | external_id stringclasses 509
values | target_sequence stringclasses 357
values | new_affinity stringlengths 3 193 ⌀ |
|---|---|---|---|---|---|---|---|---|---|
null | null | 10963808-anti DNA antibody-6 | Anti-DNA Antibody | TGCG | https://github.com/micheldumontier/aptamerbase | null | null | null | 1000000.0 |
null | null | 16940097-HCV subtype 3a-2 | Hepatitis C virus subtype 3a | GGGAGACAAGAATAAACGCTCAATTGGGGTCTGCTCGGGATTGCGGAGAACGTGAATCTTTCGACAGGAGGCTCACAACAGGC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0235 |
9222504.0 | null | RNA stem loop | RNA stem loop | GCACGGUGCUGCUGAGAUGCCCGU | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 9436913-streptomycin-1 | Streptomycin | GGAGCUCAGCCUUCACUGCUGUAACUCUAGGCUCCCGUGGAUCGCAUUUGGACUUCUGCCUAACGCGUGUGCUAGAGAGCAGGCAAACAAGUGGGCACCACGGUCGGAUCCAC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
null | null | 9436913-streptomycin-2 | Streptomycin | GGAGCUCAGCCUUCACUGCACCCCUUUGUGGGAACGCAAAACUAAAGGAAGAUCUCAAGAAAGGUGGAUCGCAUUUGGACUUCUGCCCAGGGUGGCACCACGGUCGGAUCCAC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
12219078.0 | null | 12219078-Streptavidin-1 | Streptavidin | CGGGGGTGCCCGCTGCTCGTCCAAATGACGGCTCAGCTTCGGTGGGCCTTTAACAGTAATCAATCATATGAGCAGTTTTCAACGATCACCTACCCACACCGCTCGAATGTTTGCATAAACCTGGGTAGACTCACGCATAATTGGGTTATTGAGTCTCTTTGATGGACTAACCCGGTTCTATCTCGGAGGTATTTTAGGTC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.08900000000000001 |
12219078.0 | null | 12219078-Streptavidin-2 | Streptavidin | TGACACAAAGACAGACAGGCTATCCAAGAACCCTCTTACTCTGTGAGACGACGCACCGGTCGCAGGTTTTGTCTCACAGACGCTAAAAATACAGACATGCACCAATGAACAATGAGTTCGACCGTGTTCTTGAGTTTTATGGCCGATGTGGTAAGTACTTCTACTGTATCTTCGCGTACCTTAGGTTTAACGTTCTCTTTTTCGGAATGTGCTCGCCCGCGGCATCCGACGTCCCTTTGGGGGGTAGGTGCAACGGGAATCTTGAGGGATCATT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.153 |
12135392.0 | null | 12135392-NFkBRelAp65-1 | Human Nuclear Factor kB RelA/p65 | CGGGGTGTTGTCCTGTGCTCTCCGGAGAGCACAGGACAACACCCCG | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0048 |
12135392.0 | null | 12135392-NFkBRelAp50-1 | Human Nuclear Factor kB RelA/p65 | GGGGTTCCACCTTCACTGGGCGCGCCCAGTGAAGGTGGAACCCC | https://github.com/micheldumontier/aptamerbase | null | null | null | null |
20473891.0 | null | 20473891-HETSR1-1 | 20473891-HETSR1-1 | GGGAGATACCAGCTTATTCATTCCGCAACCAAGTTTACGGAAATACCGGCTATACGCCCGACGGTTCGAGTAAGTGCAATCT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.037 |
20473891.0 | null | 20473891-HETSR1-2 | Syrian hamster embryo fibroblasts HETSR1 | GGGAGATACCAGCTATTCATTCCAGTGACGACGTCGCCCGGTTGTCTAGCCCGCGATTCACGGTTCGAGTAAGTGCAATCT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.049999999999999996 |
20936492.0 | null | 20936492-Pseudomonas aeruginosa-1 | Pseudomonas aeruginosa | CCCCCGTTGCTTTCGCTTTTCCTTTCGCTTTTGTTCGTTTCGTCCCTGCTTCCTTTCTTG | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.017269999999999997 |
20936492.0 | null | 20936492-Pseudomonas aeruginosa-2 | Pseudomonas aeruginosa | CCCCAGTGCTCAGCTTCTCCTCCGTCTCATTCTTCTGTAGGATCGTTCTGTTTTGGTACT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.05763 |
21245470.0 | null | 21245470-PA63-2 | 21245470-PA63-2 | GATGTGGGTGTAGTTGGAGGGTAAACGTT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.12687 |
21204783.0 | null | 21204783-sclerostin-1 | Sclerostin | GTTTCCAAAGCCGGGGGGGTGGGATGGGTT | https://github.com/micheldumontier/aptamerbase | null | null | null | 1.34 |
21204783.0 | null | 21204783-sclerostin-2 | Sclerostin | TTGCGCGTTAATTGGGGGGGTGGGTGGGTT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.67 |
21204783.0 | null | 21204783-sclerostin-3 | Sclerostin | TGCCTTGTTATTGTGGTGGGCGGGTGGGAC | https://github.com/micheldumontier/aptamerbase | null | null | null | 2.0700000000000003 |
null | null | 20693539-HIV-1 LTR DNA duplexes-1 | 20693539-HIV-1 LTR DNA duplexes-1 | GUGGGAAGGUACGACGCCCGCAAGUCUGGCUAACUGGG | https://github.com/micheldumontier/aptamerbase | null | null | null | 1.2 |
null | null | 19604698-DCF-4 | Diclofenac | ATACCAGCTTATTCAATTGCCAACGTGGCGGTCAGTCAGCGGGTGGTGGGTTCGGTCCAGATAGTAAGTGCAATCT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0427 |
21204783.0 | null | 21204783-sclerostin-4 | Sclerostin | GGGGGGGGTGGGGTGGGTCAATATTCTCGTC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.19999999999999998 |
21245470.0 | null | 21245470-PA63-1 | 21245470-PA63-1 | CGCACTGAAGTGGGATACCGCCTAAACGG | https://github.com/micheldumontier/aptamerbase | null | null | null | 38.17 |
null | null | 21245470-PA63-3 | Anthrax Protective Antigen | GGAATAGAGACAAAGCCACTCATATGAGT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0013000000000000002 |
null | null | 21245470-PA63-4 | Anthrax Protective Antigen | CAGACCGTAAGGGATGCCGCCTAAACACC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.13517 |
null | null | 20729797-Sphingosylphosphorylcholine-3 | Sphingosylphosphorylcholine | GGGAAUGGAUCCACAUCUACGAAUUCGCAUUGUCCGCACGCAAAGCAUUA UUGUGAUUCACUGCAGACUUGACGAAGCUU | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.252 |
21290544.0 | null | 21290544-Shp2-1 | Shp2 | AGCGTCGAATACCACTACAGGGGGTTTTGGTGGGGGGGGCTGGGTTGTCTTGGGGGTGGGCTAATGGAGCTCGTGGTCAT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.011 |
20967861.0 | null | 20967861-IL17A-1 | 20967861-IL17A-1 | TAATACGACTCACTATAGGGAAGAGGTCAGATGGTCTAGCCGGAGGAGTCAGTAATCGGTAGACCTATGCGTGCTAGAGTGA | https://github.com/micheldumontier/aptamerbase | null | null | null | 4.85e-05 |
21310253.0 | null | 21310253-IL17RA-1 | interleukin 17 RA | CTAAGGATCGGATCCACGGCCTACCAGGTC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0059 |
null | null | 21310253-IL17RA-2 | interleukin 17 RA | CTTGGATCACCATAGTCGCTAGTCGAGGCT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0012 |
null | null | 21310253-IL17RA-3 | interleukin 17 RA | ACGCGCTAGGATCAAAGCTGCACTGAAGTG | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0043 |
null | null | 21310253-IL17RA-4 | interleukin 17 RA | CCAGAAGAAGCCCACTAGCGTGCTTTTGTC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0038 |
null | null | 21310253-IL17RA-5 | interleukin 17 RA | CCAGACGTGAGCACTAGATCAGTACGGAAG | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.004 |
21504182.0 | null | 21504182-M Type S Pyogenes-1 | 21504182-M Type S Pyogenes-1 | AGCAGCACAGAGGTCAGATGCACACGCTGAAGAAACTGAGGTCGTAGGTTTTCTTCGGGCCTATGCGTGCTACCGTGAA | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.009 |
null | null | 21504182-M Type S Pyogenes-2 | 21504182-M Type S Pyogenes-2 | CACACGCTGAAGAAACTGAGGTCGTAGGTTTTCTTCGGG | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.013000000000000001 |
null | null | 21504182-M Type S Pyogenes-3 | 21504182-M Type S Pyogenes-3 | AGCAGCACAGAGGTCAGATGGGGGGAAGACACAGAGAAAGGCCGGGGTGAAGTGTAGAGGCCTATGCGTGCTACCGTGAA | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.009 |
null | null | 21504182-M Type S Pyogenes-4 | 21504182-M Type S Pyogenes-4 | TTCACGGTAGCACGCATAGGGCCCGACACTCGTCCACCCGATACCTCTCATGTGTCCCCATCTGACCTCTGTGCTGCT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.024999999999999998 |
null | null | 21504182-M Type S Pyogenes-5 | 21504182-M Type S Pyogenes-5 | AGCAGCACAGAGGTCAGATGGGCATGGGGAAGAGAAAGCGGGATAACTTCGTTACCGGGCCCTATGCGTGCTACCGTGAA | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.017 |
null | null | 21504182-M Type S Pyogenes-6 | 21504182-M Type S Pyogenes-6 | TTCACGGTAGCACGCATAGGGACAGCAAGCCCAAGCTGGGTGTGCAAGGTGAGGAGTGGGCATCTGACCTCTGTGCTGCT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.01 |
21306108.0 | null | 21306108-Acetamiprid-1 | Acetamiprid | TGTAATTTGTCTGCAGCGGTTCTTGATCGCTGACACCATATTATGAAGA | https://github.com/micheldumontier/aptamerbase | null | null | null | 4.9799999999999995 |
21381755.0 | null | 21381755-Polyphosphate Kinase 2-1 | 21381755-Polyphosphate Kinase 2-1 | AACACATAGGTTTGGTTAGGTTGGTTGGTTGAATTA | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.87 |
21420926.0 | null | 21420926-HIVRT-1 | Human immunodeficiency virus reverse transcriptase | AGGAAGGCTTTAGGTCTGAGATCTCGGAAT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.082 |
null | null | 21420926-HIVRT-2 | Human immunodeficiency virus reverse transcriptase | GGGAAGGCTTTAGGTCTGAGATCTCGGAAT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.102 |
21413891.0 | null | 21413891-Bisphenol A-1 | Bisphenol A | CCGGTGGGTGGTCAGGTGGGATAGCGTTCCGCGTATGGCCCAGCGCATCACGGGTTCGCACCA | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0083 |
21502374.0 | null | 21502374-Nuclear Factor kB-1 | Human Nuclear Factor kB RelA/p65 | GGGTAACCTTGAGTCACGAATTCAAGCGGGACAGGAGAAACACGGCATGTCAGCGAAGGTACCCAACTTACAGCTTCT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0006399999999999999 |
21559530.0 | null | 21559530-PTEN-1 | Phosphatase and Tensin Homologue | CGGAATTCCGAGCGTGGGCGTGGTCATACCGCGCCTATCGAACTCGCCACTCGCGTGCAGCTCTGTGTAGGTACGCCCACGCTCGAG | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.075 |
null | null | 21559530-PTEN-2 | Phosphatase and Tensin Homologue | CGGAATTCCGAGCGTGGGCGTGAGCCCTAAACACAAGTCCGCAGGGGTGTGGTAATATTCGCAGTTGTGTGTACGCCCACGCTCGAG | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.054 |
21565620.0 | null | 21565620-HPV16E7-1 | human papillomavirus HPV-16 E7 | TAATACGACTCACTATAGGGAGACCCAAGCCGATTTATTTTGTGCAGCTTTTGTTCCCTTTAGTGAGGGTTAATT | https://github.com/micheldumontier/aptamerbase | null | null | null | 1.5999999999999999 |
20967861.0 | null | 21524680-IL17A/F-1 | 21524680-IL17A/F-1 | GGGCUAGCUGAUCGUACCCAUAGCGUGGGCAUGGGGUGCCUAGUCGGGCGAUACUAACAGCUAACACCC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.0722 |
null | null | 21524680-IL17A/F-2 | 21524680-IL17A/F-1 | GGGCUAGCUGAUCGUACCAGUAGCGUGGCCUGGGGGGCCUAGUCGUGCGAUACUAACAGCUAACACCC | https://github.com/micheldumontier/aptamerbase | null | null | null | 1.92 |
21644840.0 | null | 21644840-ErbB2-1 | ERBB2 Receptor Protein-Tyrosine Kinase | AGCCGCGAGGGGAGGGAUAGGGUAGGGCGCGGCU | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.00349 |
21627466.0 | null | 21627466-EColiK88-1 | 21627466-EColiK88-1 | GGCGACCCCCGGGCTACCAGACAATGTACGCAGCAAGAGTGACGGTCGTACCTCGGAGTC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.044 |
null | null | 21627466-EColiK88-2 | Escherichia coli K88 | ACACTCTTTTGCTCGTGTTTTTGCCTGTTACATAAAATGAATCAGTGGATGTTTCCTTCT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.036 |
null | null | 21627466-EColiK88-3 | Escherichia coli K88 | GGCGGCCGTGAAATTTGCCAAATGCCGTCTTGGCTTTCGCCCAATGTATCCTGGGTGTTC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.043000000000000003 |
null | null | 21627466-EColiK88-4 | Escherichia coli K88 | GGAGACCGTACCATCTGTTCGTGGAAGCGCTTTGCTCGTCCATTAGCCTTGTGCTCGTGC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.024999999999999998 |
21704505.0 | null | 21704505-FADGDH-1 | flavin adenine dinucleotide-dependent glucose dehydrogenase | TCCGGGGGGCTGGGCAGGGGGGTAACTTTC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.032 |
21748194.0 | null | 21748194-Ricin-1 | Ricin | ACACCCACCGCAGGCAGACGCAACGCCTCGGAGACTAGCC | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.005 |
20061133.0 | null | 20061133-CRP-1 | C-reactive protein | GGCAGGAAGACAAACACGATGGGGGGGTATGATTTGATGTGGTTGTTGCATGATCGTGGTCTGTGGTGCTCT | https://github.com/micheldumontier/aptamerbase | null | null | null | 0.00351 |
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