text stringlengths 17 737k |
|---|
# -*- coding: utf-8 -*-
"""Main Controller"""
from ebetl.model import *
from itertools import groupby
try:
from collections import OrderedDict
except:
from ordereddict import OrderedDict
"""
from ebetl.model import *
DBSession.query(Prodotti).join(Inventarir).join(Inventarirconta).filter(Inventarir.numeroinv... |
#! /usr/bin/env python
# vi:ts=4:et
# $Id$
#
# a simple self-test
#
try:
# need Python 2.2 or better
from gc import get_objects
import gc
del get_objects
gc.enable()
except ImportError:
gc = None
import copy, os, sys
from StringIO import StringIO
try:
import cPickle
except ImportError:
... |
# -*- coding: utf-8 -*-
# Copyright 2020 The StackStorm Authors.
# Copyright 2019 Extreme Networks, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses... |
# Copyright 2014 Algolia
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software... |
from __future__ import division
from collections import OrderedDict
from numbers import Integral
import warnings
import os
import copy
from abc import ABCMeta
import itertools
from six import add_metaclass, string_types
import numpy as np
import openmc
import openmc.checkvalue as cv
from openmc.tallies import ESTIMA... |
#!/usr/bin/env python
# -*- coding: utf-8 -*-
from libavg import *
import sys
g_player = avg.Player.get()
class VideoApp(AVGApp):
def init(self):
self.videoNode = VideoNode(
href=sys.argv[1],
parent=self._parentNode)
self.videoNode.play()
VideoApp.start(r... |
from typing import List, Optional
import os.path
from pathlib import Path
from collections import ChainMap
import json
from tempfile import TemporaryDirectory
import subprocess
from click import BadParameter
from doit.action import CmdAction
from doit.tools import create_folder, config_changed
from elm_doc import elm... |
#! /usr/bin/env python
import pytest
import sys
import os
import subprocess
PYTEST_ARGS = {
'default': ['tests', '--cov', 'core_serializers', '--cov', 'tests', '--cov-report', 'term', '--cov-report', 'html'],
'travis': ['tests', '--cov', 'core_serializers', '--cov', 'tests', '--cov-report', 'term', '-v']
}
F... |
# Copyright 2012 OpenStack Foundation
# Copyright 2013 IBM Corp.
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LIC... |
from django.db.models.aggregates import Avg, Count, StdDev, Variance
from django.db.models.expressions import Ref, Value
from django.db.models.functions import ConcatPair, Length, Substr
from django.db.models.sql import compiler
from django.db.transaction import TransactionManagementError
from django.db.utils import Da... |
from __future__ import absolute_import
import logging
import zipfile
from six import StringIO
from contextlib2 import ExitStack
from fulltext import BaseBackend, get
LOGGER = logging.getLogger(__name__)
LOGGER.addHandler(logging.NullHandler())
class Backend(BaseBackend):
def handle_fobj(self, f):
wi... |
#!/usr/bin/env python3
import sys
import getopt
import os
import pvcheck
import parser
import testdata
import formatter
import jsonformatter
import csvformatter
import executor
import valgrind
import i18n
__doc__ = i18n.HELP_en
_ = i18n.translate
_DEFAULT_LOG_FILE = os.path.expanduser("~/.pvcheck.log")
def parse... |
import os
import socket
import time
import datetime
import json
import functools
import traceback
import copy
import numpy as np
from zlib import adler32
from pandacommon.pandalogger.PandaLogger import PandaLogger
from pandacommon.pandalogger import logger_utils
from pandaserver.config import panda_config
from sci... |
import slate
import string
import time
iterations = 0
number_words = 0
pdfpath = '../text.pdf'
''' Set page_begin < 0 and page_end < 0 to process whole file '''
page_begin = -1
page_end = -1
''' Counting function '''
def count_words(word, word_list):
global iterations
iterations += 1
s = word.lower().t... |
import glob
import os
import optparse
import sys
import shutil
import re
import random
import pinax
from optparse import make_option
from django.core.management.base import BaseCommand
EXCLUDED_PATTERNS = ('.svn',)
DEFAULT_PINAX_ROOT = None # fallback to the normal PINAX_ROOT in settings.py.
PINAX_ROOT_RE = re.compil... |
# Django settings for conf project.
import os
import sys
IS_PRODUCTION = True if os.environ['SERVER_SOFTWARE'].startswith('Google App Engine') else False
CONFIG_DIR = os.path.abspath(os.path.dirname(__file__))
PROJECT_DIR = os.path.dirname(CONFIG_DIR)
STATIC_ROOT = os.path.join(PROJECT_DIR, 'static')
DEBUG = True
T... |
import os
import discord
import asyncio
import sys
from discord.ext.commands import Bot
my_bot = Bot(command_prefix="!")
@my_bot.event
@asyncio.coroutine
def on_read():
print("Client logged in")
@my_bot.command()
@asyncio.coroutine
def hello(*args):
return my_bot.say("Hello, world!")
@my_bot.command()
@a... |
"""ndb model definitions
Many of these are similar to models in models.py, which are Django models. We
need these ndb versions for use with runtime: python27, which is required by
endpoints.
"""
import collections
import logging
import math
from google.appengine.ext import ndb
# TODO: move to global config
SALES_TA... |
#!/usr/bin/env python
###
# Copyright (c) 2002, Jeremiah Fincher
# All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions are met:
#
# * Redistributions of source code must retain the above copyright notice,
# ... |
'''
Created on Jan 27, 2011
@author: peyman kazemian
'''
from sts.headerspace.headerspace.hs import *
from sts.headerspace.headerspace.tf import *
from sts.headerspace.config_parser.openflow_parser import get_uniq_port_id
import sts.headerspace.config_parser.openflow_parser as of
import sys
import glob
import os
impo... |
# -*- coding: utf-8 -*-
'''
Global tests for open academy courses
'''
from psycopg2 import IntegrityError
from openerp.tests.common import TransactionCase
from openerp.tools import mute_logger
class GlobalTestOpenAcademyCourse(TransactionCase):
'''
Global tests for open academy courses
'''
# Pseudo... |
#-*- coding: utf-8 -*-
import os
import subprocess
import shutil
from datetime import datetime
from src.shell.analysis.arity import ArityAnalysis
from src.shell.analysis.type import TypeAnalysis
from src.shell.analysis.couple import CoupleAnalysis
from src.shell.analysis.analysis import Analysis
class Pintool(object... |
from __future__ import unicode_literals, division, absolute_import
from builtins import * # pylint: disable=unused-import, redefined-builtin
import os
import glob
import pytest
from flexget import plugin, plugins
from flexget.event import event, fire_event
class TestPluginApi(object):
"""
Contains plugin ... |
# vim: tabstop=4 shiftwidth=4 softtabstop=4
# Copyright 2012 OpenStack Foundation
# Copyright 2010 United States Government as represented by the
# Administrator of the National Aeronautics and Space Administration.
# Copyright 2011,2012 Akira YOSHIYAMA <akirayoshiyama@gmail.com>
# All Rights Reserved.
#
# Licensed un... |
"""Codegen for functions used as kernels in NumPy functions
Typically, the kernels of several ufuncs that can't map directly to
Python builtins
"""
import math
from llvmlite.llvmpy import core as lc
from numba.core.imputils import impl_ret_untracked
from numba.core import typing, types, errors, lowering, cgutils
f... |
# -*- coding: utf-8 -*-
from openprocurement.api.utils import opresource
from openprocurement.api.views.cancellation import TenderCancellationResource
from openprocurement.tender.openua.utils import add_next_award
@opresource(name='Tender UA Cancellations',
collection_path='/tenders/{tender_id}/cancellati... |
#!/usr/bin/env python
# GTK Interactive Console
# (C) 2003, Jon Anderson
# See www.python.org/2.2/license.html for
# license details.
#
import code
import sys
from rlcompleter import Completer
from gi.repository import Gdk
from gi.repository import Gtk
from gi.repository import Pango
banner = (
"""Gaphor I... |
import os
import sys
import re
import shutil
from os.path import abspath, basename, join, islink, isfile
from utils import on_win, site_packages, rm_rf
verbose = False
bin_dir = join(sys.prefix, 'Scripts' if on_win else 'bin')
def cp_exe(dst):
src = join(site_packages, 'setuptools', 'cli.exe')
if isfile(sr... |
#/usr/bin/env python3
import itertools
import random
from pokerHands import *
class BankRoll(object):
def __init__(self, balance=None):
if (balance is None):
balance = 0
self.balance = balance
def __str__(self):
return str(self.balance)
def __repr__(self):
ret... |
"""
Unit tests for :mod:`manwe.resources`.
"""
import datetime
import json
from mock import Mock, patch
from nose.tools import *
import requests
from manwe import resources, session
class TestAnnotation():
"""
Test :class:`manwe.resources.Annotation` and :class:`manwe.resources.AnnotationCollection`
c... |
# This is only meant to add docs to objects defined in C-extension modules.
# The purpose is to allow easier editing of the docstrings without
# requiring a re-compile.
# NOTE: Many of the methods of ndarray have corresponding functions.
# If you update these docstrings, please keep also the ones in
# core... |
"""
This is only meant to add docs to objects defined in C-extension modules.
The purpose is to allow easier editing of the docstrings without
requiring a re-compile.
NOTE: Many of the methods of ndarray have corresponding functions.
If you update these docstrings, please keep also the ones in
core/fromnum... |
# -*- coding: utf-8 -*-
# Copyright (c) 2012-2013, GEM Foundation.
#
# OpenQuake is free software: you can redistribute it and/or modify it
# under the terms of the GNU Affero General Public License as published
# by the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version... |
import asyncio
import discord
import praw
import time
class RedditFeed(object):
subreddits = ["bourbon", "scotch", "worldwhisky"]
def __init__(self, client):
self._reddit = praw.Reddit("default", check_for_updates=False, user_agent="python:elmerdiscord:v1.0.0")
self._last = time.time()
... |
"""
Django settings for MinecrunchWeb project.
Generated by 'django-admin startproject' using Django 1.10.
For more information on this file, see
https://docs.djangoproject.com/en/1.10/topics/settings/
For the full list of settings and their values, see
https://docs.djangoproject.com/en/1.10/ref/settings/
"""
impor... |
"""Implements Gauss' method for orbit determination from three topocentric
angular measurements of celestial bodies.
"""
import math
import numpy as np
from jplephem.spk import SPK
import matplotlib.pyplot as plt
from scipy.optimize import newton
# from scipy.optimize import least_squares
def load_data_mpc(fname)... |
#!/usr/bin/env python
# Copyright 2015-2016 Yelp Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law ... |
"""BST data structure."""
import timeit
class Node(object):
"""Node class used for the bst."""
def __init__(self, data=None):
"""Init node."""
self.data = data
self.left = None
self.right = None
self.parent = None
def _set_child(self, child):
"""Set child ... |
from sqlobject import col
from sqlobject import dberrors
from sqlobject.dbconnection import DBAPI
class ErrorMessage(str):
def __new__(cls, e, append_msg=''):
obj = str.__new__(cls, e.args[1] + append_msg)
obj.code = int(e.args[0])
obj.module = e.__module__
obj.exception = e.__clas... |
#!/usr/bin/env python
# -*- coding: utf-8 -*-
# Copyright 2017 EMBL - European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
# http://www.apache.org/licenses/LICEN... |
# Copyright 2016 Matthias Gazzari
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writ... |
from distutils.util import strtobool
from fabric.api import task, local, cd, settings, run, sudo, put, get, abort
from fabric.contrib import files
from fabric.contrib.console import confirm
import aws, utils
from decorators import requires_project, requires_aws_stack, requires_steady_stack, echo_output, setdefault, deb... |
# Copyright 2013 Google Inc. All rights reserved.
# Use of this source code is governed by the Apache license that can be
# found in the LICENSE file.
"""Presubmit checks for bitmapper."""
import subprocess
import sys
from git_cl import Changelist
import tempfile
import os
def CheckChangeOnUpload(input_api, output_... |
__author__ = "Jurismarches <it@jurismarches.com>"
__version__ = "3.15.0"
|
# Utility routines for processing values.
# Routine "value_summary" creates 'summary' (printable representation of value)
# that is the same in Python 2 and Python 3, and includes a hash of the entire value
# if the value display is longer than a threshold length.
# Other routines are used to support this and for Pytho... |
"""
Complete test for a SAML to SAML proxy.
"""
import inspect
import os
import os.path
import sys
from urllib.parse import urlsplit, parse_qs, urlencode, quote, urlparse
import pytest
from saml2 import BINDING_HTTP_REDIRECT, BINDING_HTTP_POST
from saml2.config import SPConfig, IdPConfig
from werkzeug.test import Clie... |
from __future__ import (absolute_import, division, print_function,
unicode_literals)
import os
from ccdproc import ImageFileCollection
import matplotlib.pyplot as plt
import time
import numpy as np
from mpl_toolkits.mplot3d import Axes3D
import re
import glob
import logging
import argparse
from ... |
#!/usr/bin/env python
# ----------------------------------------------------------------------
# Numenta Platform for Intelligent Computing (NuPIC)
# Copyright (C) 2014, Numenta, Inc. Unless you have an agreement
# with Numenta, Inc., for a separate license for this software code, the
# following terms and conditions ... |
#!/usr/bin/env python# -*- coding: utf-8 -*-
# Copyright (C) 2017, AGB & GC
# Full license can be found in License.md
# ----------------------------------------------------------------------------
"""Scale data affected by magnetic field direction or electric field
References
----------
.. [1] Chisham, G. (2017), A ne... |
"""Unit tests for `pycall.call`."""
from unittest import TestCase
from nose.tools import assert_false, eq_, ok_, raises
from pycall import Call
class TestCall(TestCase):
"""Test the `pycall.call.Call` class."""
@raises(TypeError)
def test_create_call(self):
"""Ensure creating an empty `Call` object fails.""... |
import os
import shutil
import unittest
from xml.etree import ElementTree
import cothread
from mock import MagicMock, call
from scanpointgenerator import CompoundGenerator, LineGenerator, SpiralGenerator
from malcolm.core import Context, Future, Process, TimeoutError
from malcolm.modules.ADCore.blocks import hdf_writ... |
from __future__ import absolute_import, unicode_literals
import py.test
import time
import riemann_client.client
import riemann_client.riemann_pb2
import riemann_client.transport
@py.test.fixture
def blank_transport():
return riemann_client.transport.BlankTransport()
@py.test.fixture
def self_discharging_queu... |
# Copyright (C) 2019 Andrew Hamilton. All rights reserved.
# Licensed under the Artistic License 2.0.
import functools
import os
import pickle
import shutil
class PagedList:
def __init__(self, list_, pages_dir, page_size, cache_size, exist_ok=False,
open_func=open):
self.pages_dir = pa... |
# -*- coding: utf-8 -*-
#
# This file is part of Invenio.
# Copyright (C) 2016 CERN.
#
# Invenio is free software; you can redistribute it
# and/or modify it under the terms of the GNU General Public License as
# published by the Free Software Foundation; either version 2 of the
# License, or (at your option) any later... |
"""Tests for the Wikidata parts of the page module."""
#
# (C) Pywikibot team, 2008-2021
#
# Distributed under the terms of the MIT license.
#
import copy
import json
from contextlib import suppress
from decimal import Decimal
import pywikibot
from pywikibot import pagegenerators
from pywikibot.page import (
Wik... |
# -*- coding: utf-8 -*-
import sys
import urllib
from bsdconv import Bsdconv
def bsdconv01(dt):
dt=dt.lstrip("0").upper()
if len(dt) & 1:
return "010"+dt
else:
return "01"+dt
def bnf(s):
return ",".join([bsdconv01(x) for x in s.strip().split(" ")])
iotest=[
["big5:utf-8","\xa5\x5c\x5c\xaf\xe0","功\能"],
["b... |
# Copyright (c) 2012-2014 Leif Johnson <leif@leifjohnson.net>
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, mo... |
#!/usr/bin/env python
"""Event Man(ager)
Your friendly manager of attendees at an event.
Copyright 2015-2016 Davide Alberani <da@erlug.linux.it>
RaspiBO <info@raspibo.org>
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the Licen... |
from compsoc.settings import CHOOB_FILE
from time import mktime
from datetime import datetime
import codecs
def mapred(f1,f2,list):
return reduce(f1,map(f2,list))
def write_file_callback(sender, **kwargs):
from compsoc.events.models import Event
choob_file = codecs.open(CHOOB_FILE,"w", "utf-8" )
event... |
from subprocess import Popen, PIPE
import shlex
import re
import os
from gpm.utils.console import puts
from gpm.utils.log import Log
from gpm.const.status import Status
from gpm.utils.string import decode as str_decode
class LocalOperation(object):
_RE_CD = re.compile(r"cd\s([\w\d_\/\s\~\.]+)")
@classmethod
... |
#!/usr/bin/env python
# =============================================================================
# MODULE DOCSTRING
# =============================================================================
"""
Provide cache classes to handle creation of OpenMM Context objects.
"""
# ====================================... |
import datetime
import unittest
from ..toml import loads
class LoadsTest(unittest.TestCase):
def test_empty(self):
self.assertEqual(loads(''), {})
self.assertEqual(loads('\n'), {})
self.assertEqual(loads('\t'), {})
def test_comment(self):
self.assertEqual(loads('# comment'),... |
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# d... |
# ignore useless warnings about modules already imported.
import warnings
warnings.filterwarnings('ignore', r'module.*already imported', UserWarning)
from flask import Flask, _request_ctx_stack
from flask.ext.script import Manager
from werkzeug.exceptions import default_exceptions
from ownpaste.models import Ip, Paste... |
# -*- coding: utf-8 -*-
#
# Copyright 2013 Google Inc. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless requi... |
# All edits to original document Copyright 2016 Vincent Berthiaume.
#
# Copyright 2015 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# ht... |
import correlations as cor
import dataset as dt
import numpy as np
# Read user input
aux = input("1 - Ler dados brutos, 2 - Ler dados de frequencia: ")
data_file = input("Entre com o nome do arquivo csv: ")
if aux == '1':
dataset = dt.read_raw_input(data_file)
population_file = input("Entre com o nome do arqui... |
###
# Copyright (c) 2002-2004, Jeremiah Fincher
# All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions are met:
#
# * Redistributions of source code must retain the above copyright notice,
# this list of co... |
#!/bin/env python
#
# glidein_status.py
#
# Description:
# Equivalent to condor_status, but with glidein specific info
#
# Usage:
# glidein_status.py [-help] [-gatekeeper] [-glidecluster] [-withmonitor]
#
# Author:
# Igor Sfiligoi
#
import time
import sys,os.path
sys.path.append(os.path.join(sys.path[0],"../lib")... |
__author__ = 'Tony'
from TournamentService import *
from AllPlayAll import *
from RPSPlayerExample import *
from RPSGame import *
# Create a tournament service that will set the tournament accordingly, register the players to the tournament
# and run the instance of Tournament
class RPSDriver(TournamentService.Tourna... |
#!usr/bin/python
import sys, os, random
from PyQt4 import QtGui, QtCore
import numpy, csv
from Plotter import *
class PostprocessorWidget(QtGui.QWidget):
def __init__(self, input_file_widget, execute_widget):
QtGui.QWidget.__init__(self)
self.setAttribute(QtCore.Qt.WA_DeleteOnClose)
self... |
"""
Topographica Bitmap Class.
Encapsulates the PIL Image class so that an input matrix can be displayed
as a bitmap image without needing to know about PIL proper.
There are three different base image Classes which inherit Bitmap:
PaletteBitmap - 1 2D Matrix, 1 1D Color Map
HSVBitmap - 3 2D Matrices, Color (H),... |
#!/usr/bin/env python
import rospy
import math
import autobot
from autobot.msg import drive_param
from sensor_msgs.msg import LaserScan
from autobot.msg import pid_input
from autobot.msg import wall_dist
from autobot.msg import pathFinderState
from autobot.srv import *
"""
TODO:
- [x] Decide if you want to hug right/l... |
'''
Copyright (c) 2016-2017 Wind River Systems, Inc.
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at:
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicabl... |
# -*- coding: utf-8 -*-
import xml.etree.cElementTree as ET
import logging
from util import DictObj
import client
from playlist import Playlist
from favourite import Favourite
from track import Track
from exceptions import HarvestMediaError, MissingParameter
logger = logging.getLogger('harvestmedia')
class MemberCre... |
from __future__ import absolute_import, unicode_literals
from collections import Counter, defaultdict, OrderedDict
from decimal import Decimal, InvalidOperation
import operator
from dateutil.relativedelta import relativedelta
from enum import Enum
import pytz
from django.conf import settings
from django.core.cache i... |
from __future__ import absolute_import, unicode_literals
from collections import Counter, OrderedDict
from decimal import Decimal, InvalidOperation
from itertools import chain, groupby
from operator import itemgetter
from dateutil.relativedelta import relativedelta
from enum import Enum
import numpy
import pytz
from... |
#!/usr/bin/env python
import math
from src.gene_part import GenePart
import src.translate as translate
def length_of_segment(index_pair):
return math.fabs(index_pair[1] - index_pair[0]) + 1
class MRNA:
def __init__(self, identifier, indices, parent_id, annotations=None):
self.identifier = identifier... |
# Copyright 2017 IBM All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed t... |
"""
Mine grid point extracted values for our good and the good of the IEM
Use Unidata's motherlode server :)
$Id: $:
"""
import sys
import db, network
table = network.Table( ['AWOS', 'IA_ASOS'] )
dbconn = db.connect('mos')
dbconn.query("SET TIME ZONE 'GMT'")
import csv, urllib2
import mx.DateTime
BASE_URL = "http:/... |
#
# Jasy - Web Tooling Framework
# Copyright 2010-2012 Zynga Inc.
#
import os, random
from jasy.core.Error import JasyError
from jasy.core.Permutation import Permutation
from jasy.core.Logging import *
from jasy.env.File import writeFile
from jasy.js.Class import ClassError
from jasy.js.Resolver import Resolver
fro... |
#!/usr/bin/env python
"""Convert Plink ped/map files into VCF format using plink and Plink/SEQ.
Latest version available as part of bcbio-nextgen:
https://github.com/chapmanb/bcbio-nextgen/blob/master/scripts/plink_to_vcf.py
Requires:
plink: http://pngu.mgh.harvard.edu/~purcell/plink/
PLINK/SEQ: http://atgu.mgh.harv... |
""" Interative DQL client """
import os
from fnmatch import fnmatch
import botocore
import cmd
import functools
import json
import shlex
import six
import subprocess
import traceback
from pyparsing import ParseException
from .engine import FragmentEngine
from .help import (ALTER, ANALYZE, CREATE, DELETE, DROP, DUMP, ... |
import logging
import random
from time import sleep
import unittest
import hashlib
import os
from unittest.case import SkipTest
from prismriver.main import search
from prismriver.struct import SearchConfig
class TestPlugins(unittest.TestCase):
def check_plugin(self, plugin_id, artist, title, lyric_hashes):
... |
#! /usr/bin/env python
# -*- coding: utf-8 -*-
"""
Django settings for hippocampus project.
For more information on this file, see
https://docs.djangoproject.com/en/1.6/topics/settings/
For the full list of settings and their values, see
https://docs.djangoproject.com/en/1.6/ref/settings/
"""
# Build paths inside th... |
# Copyright (C) 2014 Andrey Antukh <niwi@niwi.be>
# Copyright (C) 2014 Jesús Espino <jespinog@gmail.com>
# Copyright (C) 2014 David Barragán <bameda@dbarragan.com>
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Affero General Public License as
# published by the F... |
#!/usr/bin/env python
# -*- coding: utf-8 -*-
#
# GAM
#
# Copyright 2015, LLC All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICE... |
import dbus
import dbus.service
from servicetest import EventPattern, tp_name_prefix, tp_path_prefix, \
call_async
from mctest import exec_test, create_fakecm_account
import constants as cs
def test(q, bus, mc):
# Get the AccountManager interface
account_manager = bus.get_object(cs.AM, cs.AM_PATH)
... |
# vim: tabstop=4 shiftwidth=4 softtabstop=4
# Copyright 2012 IBM
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LI... |
import logging
formatter = logging.Formatter(fmt='[%(asctime)s %(levelname)s] %(name)s: %(message)s')
console_handler = logging.StreamHandler()
console_handler.setLevel(logging.DEBUG)
console_handler.setFormatter(formatter)
file_handler = logging.FileHandler('iron-lady.log')
file_handler.setLevel(logging.DEBUG)
fil... |
#!/usr/bin/env python
"""Unit tests for the Clinical Trials API."""
import unittest
from mock import Mock
from api import api
from clinical_trials import Trials
class TestTrialsInit(unittest.TestCase):
def test_Trials_class_init(self):
trials = Trials()
self.assertEquals(trials.base_url, 'htt... |
# -*- coding: utf-8 -*-
# FIXME color_index param
"""
Display bitcoin prices using bitcoincharts.com.
Configuration parameters:
cache_timeout: refresh interval for this module. A message from
the site: Don't query more often than once every 15 minutes!
(default 900)
color_index: Index of the ma... |
## easyReg.py
## Author: Daniel "Albinohat" Mercado
## A simple wrapper module for _winreg.
## This module provides easy access to registry keys via strings as well objects to store registry keys and entries.
## TODO - Modify walkReg's fn function to take a list as a parameter. [TESTING REQUIRED]
## -... |
# Copyright (c) 2012 The Chromium Authors. All rights reserved.
# Use of this source code is governed by a BSD-style license that can be
# found in the LICENSE file.
from master import master_config
from master.factory import webrtc_factory
defaults = {}
def mac():
return webrtc_factory.WebRTCFactory('src/out', '... |
from .paths import Paths
import logging
logger = logging.getLogger(__name__)
def get(name=None):
maps = []
for mapdir in (p for p in Paths.MAPS.iterdir()):
if mapdir.is_dir():
for mapfile in (p for p in mapdir.iterdir() if p.is_file()):
if mapfile.suffix == ".SC2Map":
... |
"""
A client in an RBFT system.
Client sends requests to each of the nodes,
and receives result of the request execution from nodes.
"""
import base64
import json
import logging
import os
import time
from binascii import unhexlify
from collections import deque, OrderedDict
from typing import List, Union, Dict, Optional... |
import uuid
from . import bigquery_client
from ...auth import get_default_credentials
from collections import defaultdict
_ENRICHMENT_ID = 'enrichment_id'
# TODO: process column name in metadata, remove spaces and points
def enrich_points(data, variables, data_geom_column='geometry', filters=dict()):
credent... |
import json
import logging
from flask import request
from sqlalchemy import text
from sqlalchemy.exc import DatabaseError
from webargs import fields, missing
from webargs.flaskparser import parser, use_kwargs
from scuevals_api.models import Course, Quarter, Department, School, Section
from scuevals_api import api, db
f... |
""" imports for GCS """
# coding=utf-8
from __future__ import print_function # python3
import os
import json # to parse URL
import urllib2 # to fetch URL
import datetime # to compose URL
import sys # for get_size
import logging
from jsondiff import diff # to show difference between json content
import cloudstora... |
# encoding: utf-8
#
# This Source Code Form is subject to the terms of the Mozilla Public
# License, v. 2.0. If a copy of the MPL was not distributed with this file,
# You can obtain one at http://mozilla.org/MPL/2.0/.
#
# Author: Kyle Lahnakoski (kyle@lahnakoski.com)
#
from __future__ import unicode_literals
from pym... |
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