Upload example_code_loadingTNG.py

example_code_loadingTNG.py

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+# illustrative script on how to use the GRIZY color data file. and loading TNG data. The links do not work. 
+
+import illustris_python as il
+import asdf
+import numpy as np
+
+# loading TNG catalog data
+basePath = "./TNG300-1/output"
+subhalos = il.groupcat.loadSubhalos(basePath, 55)
+halos = il.groupcat.loadHalos(basePath, 55)
+
+dmoPath = "./TNG300-1-Dark/output"
+halos_dmo = il.groupcat.loadHalos(dmoPath, 55)
+subhalos_dmo = il.groupcat.loadSubhalos(dmoPath, 55)
+fp_matching = np.load("./halo_matching_055_addtree.npz")['indices_fp']
+dmo_matching = np.load("./halo_matching_055_addtree.npz")['indices_dmo']
+
+# loading the GRIZY photometry data that we generated following section 2.2
+f = asdf.open("./HYDRO-TNG300-1/photo_bands_55_DESI.asdf")
+borydata = f['data']
+grizy = borydata['grizy']
+sh_index = borydata['SubhaloIndex']
+mstar = borydata['SubhaloMstar']
+
+# generating DESI like LRGs using the colors and the TNG halo and subhalo catalogs
+def desi_lrg(grizy, sh_index, mag_shift = -0.4):
+    cg, cr, ci, cz, cy = grizy.T
+    masks = (cr - cz > (cz + mag_shift - 16.83) * 0.45) & (cr - cz > (cz + mag_shift - 13.80) * 0.19)
+    print("total number of subhalos", len(sh_index), "number of desi lrgs", len(sh_index[masks]))
+    return sh_index[masks]
+
+# getting LRG indices in the catalog
+magshift = -0.4 
+desi_lrg_indices_doubleslide = desi_lrg(grizy, sh_index, magshift) # these are subhalo indices in fp
+
+# getting central and satellite indices
+subhalo_grnr = subhalos['SubhaloGrNr']
+_, central_inds = np.unique(subhalo_grnr, return_index=True)
+lrg_indices_central_doubleslide = np.intersect1d(central_inds, desi_lrg_indices_doubleslide)
+lrg_indices_satellites_doubleslide \
+= desi_lrg_indices_doubleslide[~np.in1d(desi_lrg_indices_doubleslide, lrg_indices_central_doubleslide)]
+
+
+
+# similarly to select ELG indices in the subhalo catalog we provide the following script
+def desi_elg(grizy, sh_index, mag_shift = 0.0):
+
+    # add noise 
+    maglimits = np.array([24, 23.4, 22.5])
+    cg = get_scatter(grizy[:,0], maglimits[0])+mag_shift
+    cr = get_scatter(grizy[:,1], maglimits[1])+mag_shift
+    ci = grizy[:,2]+mag_shift
+    cz = get_scatter(grizy[:,3], maglimits[2])+mag_shift
+    cy = grizy[:,4]+mag_shift
+
+    masks = (cg < 23.6) & (cg > 20) & (cr - cz > 0.3) & (cr - cz < 1.6) \
+            * (cg - cr < 1.15*(cr - cz) - 0.15) & (cg - cr < -1.2*(cr - cz) + 1.6) \
+            * (cg < maglimits[0]) & (cr < maglimits[1]) & (cz < maglimits[2])
+    print("total number of subhalos", len(sh_index), "number of desi elgs", len(sh_index[masks]))
+    return sh_index[masks]
+
+magshift = 0.6
+desi_elg_indices = desi_elg(grizy, sh_index, magshift)