metadata dict | text stringlengths 0 40.6M | id stringlengths 14 255 |
|---|---|---|
{
"filename": "lalframe.py",
"repo_name": "gwpy/gwpy",
"repo_path": "gwpy_extracted/gwpy-main/gwpy/timeseries/io/gwf/lalframe.py",
"type": "Python"
} | # -*- coding: utf-8 -*-
# Copyright (C) Duncan Macleod (2014-2020)
#
# This file is part of GWpy.
#
# GWpy is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option)... | gwpyREPO_NAMEgwpyPATH_START.@gwpy_extracted@gwpy-main@gwpy@timeseries@io@gwf@lalframe.py@.PATH_END.py |
{
"filename": "_hovermode.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/layout/scene/_hovermode.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class HovermodeValidator(_plotly_utils.basevalidators.EnumeratedValidator):
def __init__(self, plotly_name="hovermode", parent_name="layout.scene", **kwargs):
super(HovermodeValidator, self).__init__(
plotly_name=plotly_name,
parent_name=parent_n... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@layout@scene@_hovermode.py@.PATH_END.py |
{
"filename": "_color.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py2/plotly/validators/layout/scene/yaxis/title/font/_color.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class ColorValidator(_plotly_utils.basevalidators.ColorValidator):
def __init__(
self, plotly_name="color", parent_name="layout.scene.yaxis.title.font", **kwargs
):
super(ColorValidator, self).__init__(
plotly_name=plotly_name,
parent... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py2@plotly@validators@layout@scene@yaxis@title@font@_color.py@.PATH_END.py |
{
"filename": "conf.py",
"repo_name": "zclaytor/kiauhoku",
"repo_path": "kiauhoku_extracted/kiauhoku-main/docs/source/conf.py",
"type": "Python"
} | # Configuration file for the Sphinx documentation builder.
#
# This file only contains a selection of the most common options. For a full
# list see the documentation:
# https://www.sphinx-doc.org/en/master/usage/configuration.html
# -- Path setup --------------------------------------------------------------
# If ex... | zclaytorREPO_NAMEkiauhokuPATH_START.@kiauhoku_extracted@kiauhoku-main@docs@source@conf.py@.PATH_END.py |
{
"filename": "_family.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/icicle/legendgrouptitle/font/_family.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class FamilyValidator(_plotly_utils.basevalidators.StringValidator):
def __init__(
self, plotly_name="family", parent_name="icicle.legendgrouptitle.font", **kwargs
):
super(FamilyValidator, self).__init__(
plotly_name=plotly_name,
par... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@icicle@legendgrouptitle@font@_family.py@.PATH_END.py |
{
"filename": "CHANGELOG.md",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly-geo/CHANGELOG.md",
"type": "Markdown"
} | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly-geo@CHANGELOG.md@.PATH_END.py | |
{
"filename": "G_P_K_G_.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/fonttools/fontTools/ttLib/tables/G_P_K_G_.py",
"type": "Python"
} | from fontTools.misc import sstruct
from fontTools.misc.textTools import bytesjoin, safeEval, readHex
from . import DefaultTable
import sys
import array
GPKGFormat = """
> # big endian
version: H
flags: H
numGMAPs: H
numGlyplets: H
"""
# psFontName is a byte string which follows the record above. This is ze... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@fonttools@fontTools@ttLib@tables@G_P_K_G_.py@.PATH_END.py |
{
"filename": "_ids.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/sunburst/_ids.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class IdsValidator(_plotly_utils.basevalidators.DataArrayValidator):
def __init__(self, plotly_name="ids", parent_name="sunburst", **kwargs):
super(IdsValidator, self).__init__(
plotly_name=plotly_name,
parent_name=parent_name,
anim=k... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@sunburst@_ids.py@.PATH_END.py |
{
"filename": "strided_slice.py",
"repo_name": "tensorflow/tensorflow",
"repo_path": "tensorflow_extracted/tensorflow-master/tensorflow/lite/testing/op_tests/strided_slice.py",
"type": "Python"
} | # Copyright 2019 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | tensorflowREPO_NAMEtensorflowPATH_START.@tensorflow_extracted@tensorflow-master@tensorflow@lite@testing@op_tests@strided_slice.py@.PATH_END.py |
{
"filename": "lorenz.py",
"repo_name": "enthought/mayavi",
"repo_path": "mayavi_extracted/mayavi-master/examples/mayavi/mlab/lorenz.py",
"type": "Python"
} | """
An example displaying the trajectories for the Lorenz system of
equations along with the z-nullcline.
The vector field of the Lorenz system flow is integrated to display
trajectories using mlab's flow function:
:func:`mayavi.mlab.flow`.
The z-nullcline is plotted by extracting the z component of the vector
field ... | enthoughtREPO_NAMEmayaviPATH_START.@mayavi_extracted@mayavi-master@examples@mayavi@mlab@lorenz.py@.PATH_END.py |
{
"filename": "_lowsrc.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/ohlc/_lowsrc.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class LowsrcValidator(_plotly_utils.basevalidators.SrcValidator):
def __init__(self, plotly_name="lowsrc", parent_name="ohlc", **kwargs):
super(LowsrcValidator, self).__init__(
plotly_name=plotly_name,
parent_name=parent_name,
edit_ty... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@ohlc@_lowsrc.py@.PATH_END.py |
{
"filename": "mapDefault.py",
"repo_name": "GBTSpectroscopy/gbtpipe",
"repo_path": "gbtpipe_extracted/gbtpipe-master/gbtpipe/contrib/mapDefault.py",
"type": "Python"
} | import os
import sys
import subprocess
if __name__ == '__main__':
imgfile = os.path.dirname(os.path.realpath(__file__)) + '/../image.py'
imgfile = os.path.normpath(imgfile)
print "WARNING: mapDefault.py is being replaced by image.py"
print ""
print " In fact, this script is calling imag... | GBTSpectroscopyREPO_NAMEgbtpipePATH_START.@gbtpipe_extracted@gbtpipe-master@gbtpipe@contrib@mapDefault.py@.PATH_END.py |
{
"filename": "test_contrib.py",
"repo_name": "facebookresearch/faiss",
"repo_path": "faiss_extracted/faiss-main/tests/test_contrib.py",
"type": "Python"
} | # Copyright (c) Meta Platforms, Inc. and affiliates.
#
# This source code is licensed under the MIT license found in the
# LICENSE file in the root directory of this source tree.
import os
import platform
import shutil
import tempfile
import unittest
from contextlib import contextmanager
import faiss
import numpy as ... | facebookresearchREPO_NAMEfaissPATH_START.@faiss_extracted@faiss-main@tests@test_contrib.py@.PATH_END.py |
{
"filename": "py_context_manager_test.py",
"repo_name": "tensorflow/tensorflow",
"repo_path": "tensorflow_extracted/tensorflow-master/tensorflow/python/framework/py_context_manager_test.py",
"type": "Python"
} | # Copyright 2020 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | tensorflowREPO_NAMEtensorflowPATH_START.@tensorflow_extracted@tensorflow-master@tensorflow@python@framework@py_context_manager_test.py@.PATH_END.py |
{
"filename": "test_graph_vectorstores.py",
"repo_name": "langchain-ai/langchain",
"repo_path": "langchain_extracted/langchain-master/libs/community/tests/unit_tests/test_graph_vectorstores.py",
"type": "Python"
} | import pytest
from langchain_core.documents import Document
from langchain_community.graph_vectorstores.base import (
Node,
_documents_to_nodes,
_texts_to_nodes,
)
from langchain_community.graph_vectorstores.links import Link
def test_texts_to_nodes() -> None:
assert list(_texts_to_nodes(["a", "b"], ... | langchain-aiREPO_NAMElangchainPATH_START.@langchain_extracted@langchain-master@libs@community@tests@unit_tests@test_graph_vectorstores.py@.PATH_END.py |
{
"filename": "Foward_model.ipynb",
"repo_name": "ivastar/clear",
"repo_path": "clear_extracted/clear-master/notebooks/forward_modeling/Foward_model.ipynb",
"type": "Jupyter Notebook"
} | # Forward modeling tutorial using mosaic images
## Generate simulated spectra
In this tutorial I'll show you how to create 1D and 2D forward modeled grism spectra
```python
from grizli import model
import fsps
import numpy as np
import matplotlib.pyplot as plt
from matplotlib.gridspec import GridSpec
from scipy.inte... | ivastarREPO_NAMEclearPATH_START.@clear_extracted@clear-master@notebooks@forward_modeling@Foward_model.ipynb@.PATH_END.py |
{
"filename": "_ticks.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/densitymap/colorbar/_ticks.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class TicksValidator(_plotly_utils.basevalidators.EnumeratedValidator):
def __init__(
self, plotly_name="ticks", parent_name="densitymap.colorbar", **kwargs
):
super(TicksValidator, self).__init__(
plotly_name=plotly_name,
parent_name... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@densitymap@colorbar@_ticks.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "lsst-uk/lasair-lsst",
"repo_path": "lasair-lsst_extracted/lasair-lsst-main/webserver/lasair/apps/search/__init__.py",
"type": "Python"
} | lsst-ukREPO_NAMElasair-lsstPATH_START.@lasair-lsst_extracted@lasair-lsst-main@webserver@lasair@apps@search@__init__.py@.PATH_END.py | |
{
"filename": "_width.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py2/plotly/validators/barpolar/marker/line/_width.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class WidthValidator(_plotly_utils.basevalidators.NumberValidator):
def __init__(
self, plotly_name="width", parent_name="barpolar.marker.line", **kwargs
):
super(WidthValidator, self).__init__(
plotly_name=plotly_name,
parent_name=pa... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py2@plotly@validators@barpolar@marker@line@_width.py@.PATH_END.py |
{
"filename": "azure_ai_search.ipynb",
"repo_name": "langchain-ai/langchain",
"repo_path": "langchain_extracted/langchain-master/docs/docs/integrations/retrievers/azure_ai_search.ipynb",
"type": "Jupyter Notebook"
} | ---
sidebar_label: Azure AI Search
---
# AzureAISearchRetriever
[Azure AI Search](https://learn.microsoft.com/azure/search/search-what-is-azure-search) (formerly known as `Azure Cognitive Search`) is a Microsoft cloud search service that gives developers infrastructure, APIs, and tools for information retrieval of vec... | langchain-aiREPO_NAMElangchainPATH_START.@langchain_extracted@langchain-master@docs@docs@integrations@retrievers@azure_ai_search.ipynb@.PATH_END.py |
{
"filename": "cpi-rma.py",
"repo_name": "mpi4py/mpi4py",
"repo_path": "mpi4py_extracted/mpi4py-master/demo/compute-pi/cpi-rma.py",
"type": "Python"
} | #!/usr/bin/env python
"""
Parallel PI computation using Remote Memory Access (RMA)
within Python objects exposing memory buffers (requires NumPy).
usage::
$ mpiexec -n <nprocs> python cpi-rma.py
"""
from mpi4py import MPI
from math import pi as PI
from numpy import array
def get_n():
prompt = "Enter the n... | mpi4pyREPO_NAMEmpi4pyPATH_START.@mpi4py_extracted@mpi4py-master@demo@compute-pi@cpi-rma.py@.PATH_END.py |
{
"filename": "subset_array.py",
"repo_name": "astropy/reproject",
"repo_path": "reproject_extracted/reproject-main/reproject/mosaicking/subset_array.py",
"type": "Python"
} | # Licensed under a 3-clause BSD style license - see LICENSE.rst
import operator
__all__ = ["ReprojectedArraySubset"]
class ReprojectedArraySubset:
# The aim of this class is to represent a subset of an array and
# footprint extracted (or meant to represent extracted) versions
# from larger arrays and fo... | astropyREPO_NAMEreprojectPATH_START.@reproject_extracted@reproject-main@reproject@mosaicking@subset_array.py@.PATH_END.py |
{
"filename": "test_stable_log_prob.py",
"repo_name": "pyro-ppl/pyro",
"repo_path": "pyro_extracted/pyro-master/tests/distributions/test_stable_log_prob.py",
"type": "Python"
} | # Copyright Contributors to the Pyro project.
# SPDX-License-Identifier: Apache-2.0
import logging
import pytest
import torch
from scipy.stats import levy_stable
import pyro
import pyro.distributions
import pyro.distributions.stable_log_prob
from pyro.distributions import Stable, constraints
from pyro.infer import S... | pyro-pplREPO_NAMEpyroPATH_START.@pyro_extracted@pyro-master@tests@distributions@test_stable_log_prob.py@.PATH_END.py |
{
"filename": "_family.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py2/plotly/validators/cone/colorbar/tickfont/_family.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class FamilyValidator(_plotly_utils.basevalidators.StringValidator):
def __init__(
self, plotly_name="family", parent_name="cone.colorbar.tickfont", **kwargs
):
super(FamilyValidator, self).__init__(
plotly_name=plotly_name,
parent_na... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py2@plotly@validators@cone@colorbar@tickfont@_family.py@.PATH_END.py |
{
"filename": "test_eval_chain.py",
"repo_name": "langchain-ai/langchain",
"repo_path": "langchain_extracted/langchain-master/libs/langchain/tests/unit_tests/evaluation/agents/test_eval_chain.py",
"type": "Python"
} | """Test agent trajectory evaluation chain."""
from typing import Any, Dict, List, Optional, Tuple
import pytest
from langchain_core.agents import AgentAction, BaseMessage
from langchain_core.callbacks.manager import CallbackManagerForLLMRun
from langchain_core.exceptions import OutputParserException
from langchain_co... | langchain-aiREPO_NAMElangchainPATH_START.@langchain_extracted@langchain-master@libs@langchain@tests@unit_tests@evaluation@agents@test_eval_chain.py@.PATH_END.py |
{
"filename": "radial_coverage.py",
"repo_name": "sdss/mangadap",
"repo_path": "mangadap_extracted/mangadap-main/docs/papers/Overview/scripts/radial_coverage.py",
"type": "Python"
} | #!/usr/bin/env python3
import os
import time
import numpy
from matplotlib import pyplot, ticker, rc
from astropy.io import fits
from mangdap.config import defaults
from mangadap.proc.util import growth_lim
from mangadap.util.bitmask import BitMask
#------------------------------------------------------------------... | sdssREPO_NAMEmangadapPATH_START.@mangadap_extracted@mangadap-main@docs@papers@Overview@scripts@radial_coverage.py@.PATH_END.py |
{
"filename": "fileutils.py",
"repo_name": "xraypy/xraylarch",
"repo_path": "xraylarch_extracted/xraylarch-master/larch/io/fileutils.py",
"type": "Python"
} | #!/usr/bin/env python
"""
general purpose file utilities
"""
from pathlib import Path
from random import Random
alphanum = 'abcdefghijklmnopqrstuvwxyz0123456789'
rng = Random()
def random_string(n, rng_seed=None):
""" random_string(n)
generates a random string of length n, that will match:
[a-z][a-z0... | xraypyREPO_NAMExraylarchPATH_START.@xraylarch_extracted@xraylarch-master@larch@io@fileutils.py@.PATH_END.py |
{
"filename": "simple_auth.py",
"repo_name": "mhammond/pywin32",
"repo_path": "pywin32_extracted/pywin32-main/win32/Demos/security/sspi/simple_auth.py",
"type": "Python"
} | # A demo of basic SSPI authentication.
# There is a 'client' context and a 'server' context - typically these will
# be on different machines (here they are in the same process, but the same
# concepts apply)
import sspi
import sspicon
import win32api
import win32security
def lookup_ret_code(err):
for k, v in ssp... | mhammondREPO_NAMEpywin32PATH_START.@pywin32_extracted@pywin32-main@win32@Demos@security@sspi@simple_auth.py@.PATH_END.py |
{
"filename": "hybrid.py",
"repo_name": "cosmodesi/cosmoprimo",
"repo_path": "cosmoprimo_extracted/cosmoprimo-main/cosmoprimo/emulators/hybrid.py",
"type": "Python"
} | import os
from pathlib import Path
from .emulated import EmulatedEngine, Thermodynamics, Harmonic
train_dir = Path(__file__).parent / 'train'
from cosmoprimo.cosmology import DefaultBackground
class Background(DefaultBackground):
"""Background quantities."""
class CAPSEEngine(EmulatedEngine):
name =... | cosmodesiREPO_NAMEcosmoprimoPATH_START.@cosmoprimo_extracted@cosmoprimo-main@cosmoprimo@emulators@hybrid.py@.PATH_END.py |
{
"filename": "_zeros_py.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/scipy/py3/scipy/optimize/_zeros_py.py",
"type": "Python"
} | import warnings
from collections import namedtuple
import operator
from . import _zeros
from ._optimize import OptimizeResult
import numpy as np
_iter = 100
_xtol = 2e-12
_rtol = 4 * np.finfo(float).eps
__all__ = ['newton', 'bisect', 'ridder', 'brentq', 'brenth', 'toms748',
'RootResults']
# Must agree wi... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@scipy@py3@scipy@optimize@_zeros_py.py@.PATH_END.py |
{
"filename": "_ticklabelposition.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/contour/colorbar/_ticklabelposition.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class TicklabelpositionValidator(_plotly_utils.basevalidators.EnumeratedValidator):
def __init__(
self, plotly_name="ticklabelposition", parent_name="contour.colorbar", **kwargs
):
super(TicklabelpositionValidator, self).__init__(
plotly_name=plo... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@contour@colorbar@_ticklabelposition.py@.PATH_END.py |
{
"filename": "octasphere.py",
"repo_name": "hpparvi/PyTransit",
"repo_path": "PyTransit_extracted/PyTransit-master/pytransit/utils/octasphere.py",
"type": "Python"
} | # PyTransit: fast and easy exoplanet transit modelling in Python.
# Copyright (C) 2010-2021 Hannu Parviainen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the Licen... | hpparviREPO_NAMEPyTransitPATH_START.@PyTransit_extracted@PyTransit-master@pytransit@utils@octasphere.py@.PATH_END.py |
{
"filename": "firefly-docker.md",
"repo_name": "Caltech-IPAC/firefly",
"repo_path": "firefly_extracted/firefly-master/docs/firefly-docker.md",
"type": "Markdown"
} | Firefly from Docker
-----------------------
#### Docker:
- Firefly is containerized and can be pulled from docker
- Docker images allow users to run software from a container that has the required software stack.
- Documentation about Docker can be found here: https://www.docker.com
#### How to run Firefly from a ... | Caltech-IPACREPO_NAMEfireflyPATH_START.@firefly_extracted@firefly-master@docs@firefly-docker.md@.PATH_END.py |
{
"filename": "_font.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/scatterpolar/hoverlabel/_font.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class FontValidator(_plotly_utils.basevalidators.CompoundValidator):
def __init__(
self, plotly_name="font", parent_name="scatterpolar.hoverlabel", **kwargs
):
super(FontValidator, self).__init__(
plotly_name=plotly_name,
parent_name=... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@scatterpolar@hoverlabel@_font.py@.PATH_END.py |
{
"filename": "_opacity.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/box/marker/_opacity.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class OpacityValidator(_plotly_utils.basevalidators.NumberValidator):
def __init__(self, plotly_name="opacity", parent_name="box.marker", **kwargs):
super(OpacityValidator, self).__init__(
plotly_name=plotly_name,
parent_name=parent_name,
... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@box@marker@_opacity.py@.PATH_END.py |
{
"filename": "function_library.py",
"repo_name": "rae-holcomb/SpinSpotter",
"repo_path": "SpinSpotter_extracted/SpinSpotter-main/spinspotter/function_library.py",
"type": "Python"
} | # Core SpinSpotter Library
# Created: April 5, 2021
# Last updated: June 2022
# (or possibly more recently, I honestly forget to update this line often)
# imports
import matplotlib.pyplot as plt
import numpy as np
import pandas as pd
import lightkurve as lk
from statsmodels.tsa.stattools import acf
from scipy.signal ... | rae-holcombREPO_NAMESpinSpotterPATH_START.@SpinSpotter_extracted@SpinSpotter-main@spinspotter@function_library.py@.PATH_END.py |
{
"filename": "test_deprecate_nonkeyword_arguments.py",
"repo_name": "pandas-dev/pandas",
"repo_path": "pandas_extracted/pandas-main/pandas/tests/util/test_deprecate_nonkeyword_arguments.py",
"type": "Python"
} | """
Tests for the `deprecate_nonkeyword_arguments` decorator
"""
import inspect
from pandas.util._decorators import deprecate_nonkeyword_arguments
import pandas._testing as tm
@deprecate_nonkeyword_arguments(
version="1.1", allowed_args=["a", "b"], name="f_add_inputs"
)
def f(a, b=0, c=0, d=0):
return a + ... | pandas-devREPO_NAMEpandasPATH_START.@pandas_extracted@pandas-main@pandas@tests@util@test_deprecate_nonkeyword_arguments.py@.PATH_END.py |
{
"filename": "cosmo.py",
"repo_name": "amusecode/amuse",
"repo_path": "amuse_extracted/amuse-main/src/amuse/ext/cosmo.py",
"type": "Python"
} | # simple cosmology calc.
# to be extended as needed
import numpy
from amuse.units import units, generic_unit_system
from amuse.units.quantities import to_quantity
from amuse.datamodel import Particles
from amuse.support.exceptions import AmuseException
def findbin(ylist,y):
s=1
if ylist[0]>=ylist[-1]:
s=-1
... | amusecodeREPO_NAMEamusePATH_START.@amuse_extracted@amuse-main@src@amuse@ext@cosmo.py@.PATH_END.py |
{
"filename": "AudioEmbedderOptions.md",
"repo_name": "tensorflow/tensorflow",
"repo_path": "tensorflow_extracted/tensorflow-master/tensorflow/lite/g3doc/api_docs/python/tflite_support/task/audio/AudioEmbedderOptions.md",
"type": "Markdown"
} | page_type: reference
description: Options for the audio embedder task.
<link rel="stylesheet" href="/site-assets/css/style.css">
<!-- DO NOT EDIT! Automatically generated file. -->
<div itemscope itemtype="http://developers.google.com/ReferenceObject">
<meta itemprop="name" content="tflite_support.task.audio.AudioE... | tensorflowREPO_NAMEtensorflowPATH_START.@tensorflow_extracted@tensorflow-master@tensorflow@lite@g3doc@api_docs@python@tflite_support@task@audio@AudioEmbedderOptions.md@.PATH_END.py |
{
"filename": "test_craterstats.py",
"repo_name": "ggmichael/craterstats",
"repo_path": "craterstats_extracted/craterstats-main/src/craterstats/tests/test_craterstats.py",
"type": "Python"
} | # Copyright (c) 2021, Greg Michael
# Licensed under BSD 3-Clause License. See LICENSE.txt for details.
import unittest
import numpy as np
import craterstats as cst
class TestCraterstats(unittest.TestCase):
def test_bin_bias_correction(self):
self.assertEqual(cst.bin_bias_correction(np.sqrt(2), 0), 1.... | ggmichaelREPO_NAMEcraterstatsPATH_START.@craterstats_extracted@craterstats-main@src@craterstats@tests@test_craterstats.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "noraeisner/LATTE",
"repo_path": "LATTE_extracted/LATTE-master/LATTE/tests/__init__.py",
"type": "Python"
} | noraeisnerREPO_NAMELATTEPATH_START.@LATTE_extracted@LATTE-master@LATTE@tests@__init__.py@.PATH_END.py | |
{
"filename": "deferred.py",
"repo_name": "rhayes777/PyAutoFit",
"repo_path": "PyAutoFit_extracted/PyAutoFit-main/autofit/mapper/prior/deferred.py",
"type": "Python"
} | from autofit import exc
class DeferredInstance:
def __init__(self, cls: type, constructor_arguments: {str: object}):
"""
An instance that has been deferred for later construction
Parameters
----------
cls
The class to be constructed
constructor_argument... | rhayes777REPO_NAMEPyAutoFitPATH_START.@PyAutoFit_extracted@PyAutoFit-main@autofit@mapper@prior@deferred.py@.PATH_END.py |
{
"filename": "flux_calibration.py",
"repo_name": "RTIP/artip",
"repo_path": "artip_extracted/artip-master/casa_scripts/flux_calibration.py",
"type": "Python"
} | import sys
script_parameters_start_index = sys.argv.index('-c') + 2
parameters = sys.argv[script_parameters_start_index:]
run_count = int(parameters[0])
ms_dataset = parameters[1]
output_path = parameters[2]
field = parameters[3]
refant = parameters[4]
spw = parameters[5]
minsnr = float(parameters[6])
intphase_calta... | RTIPREPO_NAMEartipPATH_START.@artip_extracted@artip-master@casa_scripts@flux_calibration.py@.PATH_END.py |
{
"filename": "coffee.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/Pygments/py3/pygments/styles/coffee.py",
"type": "Python"
} | """
pygments.styles.coffee
~~~~~~~~~~~~~~~~~~~~~~
A warm and cozy theme based off gruvbox
:copyright: Copyright 2006-2024 by the Pygments team, see AUTHORS.
:license: BSD, see LICENSE for details.
"""
from pygments.style import Style
from pygments.token import (Comment, Error, Generic, Keyword, L... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@Pygments@py3@pygments@styles@coffee.py@.PATH_END.py |
{
"filename": "test_image_gui.py",
"repo_name": "rongmon/rbcodes",
"repo_path": "rbcodes_extracted/rbcodes-master/GUIs/zgui/test_image_gui.py",
"type": "Python"
} | from astropy.io import fits
import matplotlib.pyplot as plt
import numpy as np
from copy import deepcopy
import matplotlib
import Spec_Inspect as S
filename='/Users/bordoloi/Dropbox/COS-Pairs/Targets/J2228-0950/Data/lris_longslit/long_radd.fits'
a=fits.open(filename)
data = a[0].data
two_d_spec=np.transpose(deepco... | rongmonREPO_NAMErbcodesPATH_START.@rbcodes_extracted@rbcodes-master@GUIs@zgui@test_image_gui.py@.PATH_END.py |
{
"filename": "_color.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/layout/yaxis/title/font/_color.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class ColorValidator(_plotly_utils.basevalidators.ColorValidator):
def __init__(
self, plotly_name="color", parent_name="layout.yaxis.title.font", **kwargs
):
super(ColorValidator, self).__init__(
plotly_name=plotly_name,
parent_name=... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@layout@yaxis@title@font@_color.py@.PATH_END.py |
{
"filename": "runningJobs.py",
"repo_name": "cmbant/CosmoMC",
"repo_path": "CosmoMC_extracted/CosmoMC-master/python/runningJobs.py",
"type": "Python"
} | from __future__ import absolute_import
from __future__ import print_function
from paramgrid import batchjob_args, jobqueue
Opts = batchjob_args.batchArgs(
'List details of running or queued jobs; gives job stats, then current R-1 and job/chain names', importance=True,
batchPathOptional=True)
group = Opts.pars... | cmbantREPO_NAMECosmoMCPATH_START.@CosmoMC_extracted@CosmoMC-master@python@runningJobs.py@.PATH_END.py |
{
"filename": "cutoutAndSimulate2.py",
"repo_name": "oliverphilcox/HADES",
"repo_path": "HADES_extracted/HADES-master/tile_creation/cutoutAndSimulate2.py",
"type": "Python"
} | if __name__=='__main__':
reMake=True # whether to remake previously created data
from flipper import *
from flipperPol import *
import healpy
import sys
sys.path.append('/data/ohep2/EngelenTools/')
sys.path.append('/data/ohep2/hades/')
from hades.params import BICEP
a=BICEP()
from hades.padded_debiased_w... | oliverphilcoxREPO_NAMEHADESPATH_START.@HADES_extracted@HADES-master@tile_creation@cutoutAndSimulate2.py@.PATH_END.py |
{
"filename": "dtd.py",
"repo_name": "pytorch/vision",
"repo_path": "vision_extracted/vision-main/torchvision/prototype/datasets/_builtin/dtd.py",
"type": "Python"
} | import enum
import pathlib
from typing import Any, BinaryIO, Dict, List, Optional, Tuple, Union
from torchdata.datapipes.iter import CSVParser, Demultiplexer, Filter, IterDataPipe, IterKeyZipper, LineReader, Mapper
from torchvision.prototype.datasets.utils import Dataset, EncodedImage, HttpResource, OnlineResource
fro... | pytorchREPO_NAMEvisionPATH_START.@vision_extracted@vision-main@torchvision@prototype@datasets@_builtin@dtd.py@.PATH_END.py |
{
"filename": "test_fitting.py",
"repo_name": "lucabaldini/ixpeobssim",
"repo_path": "ixpeobssim_extracted/ixpeobssim-main/tests/test_fitting.py",
"type": "Python"
} | #!/usr/bin/env python
#
# Copyright (C) 2021, the ixpeobssim team.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 3 of the License, or
# (at your option) any later version.
#
#... | lucabaldiniREPO_NAMEixpeobssimPATH_START.@ixpeobssim_extracted@ixpeobssim-main@tests@test_fitting.py@.PATH_END.py |
{
"filename": "generate_python_docs.py",
"repo_name": "tigerchenlu98/rebound",
"repo_path": "rebound_extracted/rebound-main/docs/generate_python_docs.py",
"type": "Python"
} | import rebound
import inspect
import docstring_to_markdown
def convert_code_blocks(doc):
new_doc = ""
lines = doc.split("\n")
first = True
for line in lines:
if first:
if line[:3]==">>>":
first = False
new_doc += "```python\n"
new_doc +... | tigerchenlu98REPO_NAMEreboundPATH_START.@rebound_extracted@rebound-main@docs@generate_python_docs.py@.PATH_END.py |
{
"filename": "_lineposition.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/scattermap/marker/colorbar/tickfont/_lineposition.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class LinepositionValidator(_plotly_utils.basevalidators.FlaglistValidator):
def __init__(
self,
plotly_name="lineposition",
parent_name="scattermap.marker.colorbar.tickfont",
**kwargs,
):
super(LinepositionValidator, self).__init__(
... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@scattermap@marker@colorbar@tickfont@_lineposition.py@.PATH_END.py |
{
"filename": "fpfs_summary_sim.py",
"repo_name": "mr-superonion/FPFS",
"repo_path": "FPFS_extracted/FPFS-master/bin/fpfs_summary_sim.py",
"type": "Python"
} | #!/usr/bin/env python
#
# FPFS shear estimator
# Copyright 20221013 Xiangchong Li.
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any la... | mr-superonionREPO_NAMEFPFSPATH_START.@FPFS_extracted@FPFS-master@bin@fpfs_summary_sim.py@.PATH_END.py |
{
"filename": "demodulation.py",
"repo_name": "simonsobs/sotodlib",
"repo_path": "sotodlib_extracted/sotodlib-master/sotodlib/tod_ops/demodulation.py",
"type": "Python"
} | """Functions used for demodulating general sinusoidal modulation in
timestreams. Often used in lab testing or with optical choppers."""
import numpy as np
from sotodlib.tod_ops import filters
from scipy.optimize import curve_fit
import logging
logger = logging.getLogger(__name__)
def _remove_demod_placeholders(aman... | simonsobsREPO_NAMEsotodlibPATH_START.@sotodlib_extracted@sotodlib-master@sotodlib@tod_ops@demodulation.py@.PATH_END.py |
{
"filename": "_opacitysrc.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py2/plotly/validators/scatter/marker/_opacitysrc.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class OpacitysrcValidator(_plotly_utils.basevalidators.SrcValidator):
def __init__(
self, plotly_name="opacitysrc", parent_name="scatter.marker", **kwargs
):
super(OpacitysrcValidator, self).__init__(
plotly_name=plotly_name,
parent_n... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py2@plotly@validators@scatter@marker@_opacitysrc.py@.PATH_END.py |
{
"filename": "Synchrotron.py",
"repo_name": "TommasoRonconi/galapy",
"repo_path": "galapy_extracted/galapy-main/galapy/Synchrotron.py",
"type": "Python"
} | """ The Synchrotron module implements a generic parameterized synchrotron emission.
"""
########################################################################################
# External imports
import numpy
# Internal imports
from galapy.internal.constants import clight
from .SYN_core import CSYN
################... | TommasoRonconiREPO_NAMEgalapyPATH_START.@galapy_extracted@galapy-main@galapy@Synchrotron.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "CosmoLike/cocoa",
"repo_path": "cocoa_extracted/cocoa-main/Cocoa/external_modules/code/planck/code/plc_3.0/plc-3.1/src/python/clik/__init__.py",
"type": "Python"
} | from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import os.path as osp
if osp.exists(osp.join(osp.dirname(__file__),"lkl.pyx")):
raise ImportError("Cannot import clik python wrapper from the source directory.\nMake sure that you have compiled and installed ... | CosmoLikeREPO_NAMEcocoaPATH_START.@cocoa_extracted@cocoa-main@Cocoa@external_modules@code@planck@code@plc_3.0@plc-3.1@src@python@clik@__init__.py@.PATH_END.py |
{
"filename": "function-calculation.md",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/catboost/docs/en/_includes/work_src/reusage-common-phrases/function-calculation.md",
"type": "Markdown"
} |
The calculation of this function consists of the following steps:
| catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@catboost@docs@en@_includes@work_src@reusage-common-phrases@function-calculation.md@.PATH_END.py |
{
"filename": "_title.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/sunburst/marker/colorbar/_title.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class TitleValidator(_plotly_utils.basevalidators.TitleValidator):
def __init__(
self, plotly_name="title", parent_name="sunburst.marker.colorbar", **kwargs
):
super(TitleValidator, self).__init__(
plotly_name=plotly_name,
parent_name... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@sunburst@marker@colorbar@_title.py@.PATH_END.py |
{
"filename": "_font.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py2/plotly/graph_objs/splom/marker/colorbar/title/_font.py",
"type": "Python"
} | from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
# class properties
# --------------------
_parent_path_str = "splom.marker.colorbar.title"
_path_str = "splom.marker.colorbar.title.font"
_valid_props = {"c... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py2@plotly@graph_objs@splom@marker@colorbar@title@_font.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "NumCosmo/NumCosmo",
"repo_path": "NumCosmo_extracted/NumCosmo-master/numcosmo_py/plotting/__init__.py",
"type": "Python"
} | #
# __init__.py
#
# Wed Feb 8 10:00:00 2023
# Copyright 2023 Sandro Dias Pinto Vitenti
# <vitenti@uel.br>
#
# __init__.py
# Copyright (C) 2023 Sandro Dias Pinto Vitenti <vitenti@uel.br>
#
# numcosmo is free software: you can redistribute it and/or modify it
# under the terms of the GNU General Public License as publi... | NumCosmoREPO_NAMENumCosmoPATH_START.@NumCosmo_extracted@NumCosmo-master@numcosmo_py@plotting@__init__.py@.PATH_END.py |
{
"filename": "pixel_grid_test.py",
"repo_name": "Herculens/herculens",
"repo_path": "herculens_extracted/herculens-main/test/Coordinates/pixel_grid_test.py",
"type": "Python"
} | # Testing modeling workflows
#
# Copyright (c) 2023, herculens developers and contributors
import pytest
import numpy as np
import numpy.testing as npt
from herculens.Coordinates.pixel_grid import PixelGrid
def _create_pixel_grid(nx, ny, pix_scl, rot_angle, centered=True):
transform_pix2angle = pix_scl * np.ar... | HerculensREPO_NAMEherculensPATH_START.@herculens_extracted@herculens-main@test@Coordinates@pixel_grid_test.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "swagnercarena/paltas",
"repo_path": "paltas_extracted/paltas-main/paltas/Utils/__init__.py",
"type": "Python"
} | from . import cosmology_utils
from . import power_law
from . import hubble_utils
from . import lenstronomy_utils
| swagnercarenaREPO_NAMEpaltasPATH_START.@paltas_extracted@paltas-main@paltas@Utils@__init__.py@.PATH_END.py |
{
"filename": "test_penalized.py",
"repo_name": "statsmodels/statsmodels",
"repo_path": "statsmodels_extracted/statsmodels-main/statsmodels/gam/tests/test_penalized.py",
"type": "Python"
} | """
unit test for GAM
Author: Josef Perktold
"""
import os
import numpy as np
from numpy.testing import assert_allclose, assert_equal, assert_
import pandas as pd
import pytest
import patsy
from statsmodels.discrete.discrete_model import Poisson, Logit, Probit
from statsmodels.genmod.generalized_linear_model imp... | statsmodelsREPO_NAMEstatsmodelsPATH_START.@statsmodels_extracted@statsmodels-main@statsmodels@gam@tests@test_penalized.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "ML4GW/ml4gw",
"repo_path": "ml4gw_extracted/ml4gw-main/ml4gw/nn/autoencoder/__init__.py",
"type": "Python"
} | from .base import Autoencoder
from .convolutional import ConvolutionalAutoencoder
from .skip_connection import AddSkipConnect, ConcatSkipConnect, SkipConnection
| ML4GWREPO_NAMEml4gwPATH_START.@ml4gw_extracted@ml4gw-main@ml4gw@nn@autoencoder@__init__.py@.PATH_END.py |
{
"filename": "common.py",
"repo_name": "waynebhayes/SpArcFiRe",
"repo_path": "SpArcFiRe_extracted/SpArcFiRe-master/scripts/SpArcFiRe-pyvenv/lib/python2.7/site-packages/astropy/io/ascii/tests/common.py",
"type": "Python"
} | # Licensed under a 3-clause BSD style license - see LICENSE.rst
from __future__ import absolute_import
import os
import numpy as np
__all__ = ['raises', 'assert_equal', 'assert_almost_equal',
'assert_true', 'setup_function', 'teardown_function',
'has_isnan']
CWD = os.getcwd()
TEST_DIR = os.... | waynebhayesREPO_NAMESpArcFiRePATH_START.@SpArcFiRe_extracted@SpArcFiRe-master@scripts@SpArcFiRe-pyvenv@lib@python2.7@site-packages@astropy@io@ascii@tests@common.py@.PATH_END.py |
{
"filename": "core.py",
"repo_name": "jolideco/jolideco",
"repo_path": "jolideco_extracted/jolideco-main/jolideco/models/core.py",
"type": "Python"
} | import logging
from pathlib import Path
from typing import Any
import matplotlib.pyplot as plt
import numpy as np
import torch
import torch.nn as nn
import torch.nn.functional as F
from astropy.coordinates import SkyCoord
from astropy.utils import lazyproperty
from astropy.visualization import simple_norm
from astropy... | jolidecoREPO_NAMEjolidecoPATH_START.@jolideco_extracted@jolideco-main@jolideco@models@core.py@.PATH_END.py |
{
"filename": "_color.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/contour/hoverlabel/font/_color.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class ColorValidator(_plotly_utils.basevalidators.ColorValidator):
def __init__(
self, plotly_name="color", parent_name="contour.hoverlabel.font", **kwargs
):
super(ColorValidator, self).__init__(
plotly_name=plotly_name,
parent_name=... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@contour@hoverlabel@font@_color.py@.PATH_END.py |
{
"filename": "history.py",
"repo_name": "langchain-ai/langchain",
"repo_path": "langchain_extracted/langchain-master/libs/langchain/langchain/schema/runnable/history.py",
"type": "Python"
} | from langchain_core.runnables.history import (
GetSessionHistoryCallable,
MessagesOrDictWithMessages,
RunnableWithMessageHistory,
)
__all__ = [
"RunnableWithMessageHistory",
"GetSessionHistoryCallable",
"MessagesOrDictWithMessages",
]
| langchain-aiREPO_NAMElangchainPATH_START.@langchain_extracted@langchain-master@libs@langchain@langchain@schema@runnable@history.py@.PATH_END.py |
{
"filename": "_alignsrc.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/pie/hoverlabel/_alignsrc.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class AlignsrcValidator(_plotly_utils.basevalidators.SrcValidator):
def __init__(self, plotly_name="alignsrc", parent_name="pie.hoverlabel", **kwargs):
super(AlignsrcValidator, self).__init__(
plotly_name=plotly_name,
parent_name=parent_name,
... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@pie@hoverlabel@_alignsrc.py@.PATH_END.py |
{
"filename": "_fisher.py",
"repo_name": "deepmind/optax",
"repo_path": "optax_extracted/optax-main/optax/second_order/_fisher.py",
"type": "Python"
} | # Copyright 2019 DeepMind Technologies Limited. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by ... | deepmindREPO_NAMEoptaxPATH_START.@optax_extracted@optax-main@optax@second_order@_fisher.py@.PATH_END.py |
{
"filename": "pdftree.py",
"repo_name": "hanyk/BayeSED3",
"repo_path": "BayeSED3_extracted/BayeSED3-main/test3/seedcat2_0_STARFORMING_inoise2/8144596/pdftree.py",
"type": "Python"
} | from getdist import plots
g=plots.get_subplot_plotter(chain_dir=r'./')
roots = []
roots.append('0csp_sfh201_bc2003_hr_stelib_chab_neb_300r_i0100_rdf0_2dal8_10_z_phot_sample_par')
roots.append('0csp_sfh201_bc2003_hr_stelib_chab_neb_300r_i0100_rdf0_2dal8_10_z_spec_sample_par')
roots.append('0csp_sfh201_bc2003_hr_stelib_... | hanykREPO_NAMEBayeSED3PATH_START.@BayeSED3_extracted@BayeSED3-main@test3@seedcat2_0_STARFORMING_inoise2@8144596@pdftree.py@.PATH_END.py |
{
"filename": "plotstuff.py",
"repo_name": "RuthAngus/gprotation",
"repo_path": "gprotation_extracted/gprotation-master/gprotation/plotstuff.py",
"type": "Python"
} | import matplotlib.pyplot as plt
from colours import plot_colours
ocols = plot_colours()
def params():
plotpar = {'axes.labelsize': 18,
'font.size': 10,
'legend.fontsize': 15,
'xtick.labelsize': 18,
'ytick.labelsize': 18,
'text.usetex': True... | RuthAngusREPO_NAMEgprotationPATH_START.@gprotation_extracted@gprotation-master@gprotation@plotstuff.py@.PATH_END.py |
{
"filename": "pull_request_template.md",
"repo_name": "QEF/q-e",
"repo_path": "q-e_extracted/q-e-master/.github/pull_request_template.md",
"type": "Markdown"
} | **You are submitting a Pull Request on [Github](https://github.com/QEF/q-e) which is a mirror of [Gitlab](https://gitlab.com/QEF/q-e).**
**Please stop and instead submit a [Merge Request](https://gitlab.com/QEF/q-e/-/merge_requests) at Gitlab.**
Some guide about [contributing to Quantum ESPRESSO using Gitlab](https:/... | QEFREPO_NAMEq-ePATH_START.@q-e_extracted@q-e-master@.github@pull_request_template.md@.PATH_END.py |
{
"filename": "helpers.py",
"repo_name": "adrn/SuperFreq",
"repo_path": "SuperFreq_extracted/SuperFreq-main/superfreq/tests/helpers.py",
"type": "Python"
} | # coding: utf-8
from __future__ import division, print_function
__author__ = "adrn <adrn@astro.columbia.edu>"
# Third-party
import numpy as np
def cartesian_to_poincare(xy, vxy):
# assuming z == 0
R = np.sqrt(xy[0]**2 + xy[1]**2)
phi = np.arctan2(xy[0], xy[1])
vR = (xy[0]*vxy[0] + xy[1]*vxy[1]) / R... | adrnREPO_NAMESuperFreqPATH_START.@SuperFreq_extracted@SuperFreq-main@superfreq@tests@helpers.py@.PATH_END.py |
{
"filename": "PRyM_jl_sys.py",
"repo_name": "vallima/PRyMordial",
"repo_path": "PRyMordial_extracted/PRyMordial-main/PRyM/PRyM_jl_sys.py",
"type": "Python"
} | # -*- coding: utf-8 -*-
from julia import Main
dTtotdtSMjl = Main.eval("""
function dTtotSMdt_jl(dT,T,p,t)
Tg, Tnu = T
dT[1] = p[1](Tg,Tnu,Tnu)
dT[2] = p[2](Tg,Tnu,Tnu)
end""")
dTtotdtNPjl = Main.eval("""
function dTtotdtNP_jl(dT,T,p,t)
Tg, Tnu, TNP = T
dT[1] = p[1](Tg,Tnu,Tnu,TNP)
dT[2] = p[2](Tg,Tnu,Tnu... | vallimaREPO_NAMEPRyMordialPATH_START.@PRyMordial_extracted@PRyMordial-main@PRyM@PRyM_jl_sys.py@.PATH_END.py |
{
"filename": "util.py",
"repo_name": "tardis-sn/tardis",
"repo_path": "tardis_extracted/tardis-main/tardis/io/atom_data/util.py",
"type": "Python"
} | import os
import logging
from tardis.io.config_internal import get_data_dir
from tardis.io.atom_data.atom_web_download import (
get_atomic_repo_config,
download_atom_data,
)
logger = logging.getLogger(__name__)
def resolve_atom_data_fname(fname):
"""
Check where if atom data HDF file is available on... | tardis-snREPO_NAMEtardisPATH_START.@tardis_extracted@tardis-main@tardis@io@atom_data@util.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "Swift-BAT/NITRATES",
"repo_path": "NITRATES_extracted/NITRATES-main/nitrates/llh_analysis/__init__.py",
"type": "Python"
} | __all__ = [
"LLH",
"do_bkg_estimation_wPSs_mp2",
"do_llh_inFoV4realtime",
"do_llh_inFoV4realtime2",
"do_llh_outFoV4realtime",
"do_llh_outFoV4realtime2",
"do_manage2",
"minimizers",
]
from .LLH import *
from .do_bkg_estimation_wPSs_mp2 import *
from .do_llh_inFoV4realtime import *
from .... | Swift-BATREPO_NAMENITRATESPATH_START.@NITRATES_extracted@NITRATES-main@nitrates@llh_analysis@__init__.py@.PATH_END.py |
{
"filename": "eti.py",
"repo_name": "GeminiDRSoftware/DRAGONS",
"repo_path": "DRAGONS_extracted/DRAGONS-master/gempy/eti_core/eti.py",
"type": "Python"
} | from multiprocessing import Process, Queue
from subprocess import STDOUT, CalledProcessError, check_output
from ..utils import logutils
log = logutils.get_logger(__name__)
def loop_process(in_queue, out_queue):
"""
Code to spawn a subprocess for running external tasks
Parameters
----------
in_q... | GeminiDRSoftwareREPO_NAMEDRAGONSPATH_START.@DRAGONS_extracted@DRAGONS-master@gempy@eti_core@eti.py@.PATH_END.py |
{
"filename": "legacy.py",
"repo_name": "PrefectHQ/prefect",
"repo_path": "prefect_extracted/prefect-main/src/prefect/settings/legacy.py",
"type": "Python"
} | import inspect
import os
from functools import cache
from typing import Any, Dict, Optional, Set, Type, get_args
from pydantic import AliasChoices
from pydantic_settings import BaseSettings
from typing_extensions import Self
from prefect.settings.base import PrefectBaseSettings
from prefect.settings.constants import ... | PrefectHQREPO_NAMEprefectPATH_START.@prefect_extracted@prefect-main@src@prefect@settings@legacy.py@.PATH_END.py |
{
"filename": "_updatemenu.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/graph_objs/layout/_updatemenu.py",
"type": "Python"
} | from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Updatemenu(_BaseLayoutHierarchyType):
# class properties
# --------------------
_parent_path_str = "layout"
_path_str = "layout.updatemenu"
_valid_props = {
"active",
"b... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@graph_objs@layout@_updatemenu.py@.PATH_END.py |
{
"filename": "_uirevision.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/funnelarea/_uirevision.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class UirevisionValidator(_plotly_utils.basevalidators.AnyValidator):
def __init__(self, plotly_name="uirevision", parent_name="funnelarea", **kwargs):
super(UirevisionValidator, self).__init__(
plotly_name=plotly_name,
parent_name=parent_name,
... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@funnelarea@_uirevision.py@.PATH_END.py |
{
"filename": "CMB_CamSpec.py",
"repo_name": "cmbant/CosmoMC",
"repo_path": "CosmoMC_extracted/CosmoMC-master/python/planck/CMB_CamSpec.py",
"type": "Python"
} | # simplified pure python version of CamSpec. Not yet inherited from CMBlikes
# but does need cosmomc:python in path to import CMBlikes.ClsArray type
# see main function at bottom for example of usage
from __future__ import absolute_import
from __future__ import print_function
import numpy as np
from CMBlikes import Cls... | cmbantREPO_NAMECosmoMCPATH_START.@CosmoMC_extracted@CosmoMC-master@python@planck@CMB_CamSpec.py@.PATH_END.py |
{
"filename": "Radial_Profile.ipynb",
"repo_name": "jzuhone/soxs",
"repo_path": "soxs_extracted/soxs-main/doc/source/cookbook/Radial_Profile.ipynb",
"type": "Jupyter Notebook"
} | # Radial Profile
This example shows how to create a radial profile from a SOXS event file, including using an exposure map to get flux-based quantities. We'll simulate a simple isothermal cluster.
```python
import matplotlib
matplotlib.rc("font", size=18)
import matplotlib.pyplot as plt
import soxs
import astropy.i... | jzuhoneREPO_NAMEsoxsPATH_START.@soxs_extracted@soxs-main@doc@source@cookbook@Radial_Profile.ipynb@.PATH_END.py |
{
"filename": "setup.py",
"repo_name": "vaexio/vaex",
"repo_path": "vaex_extracted/vaex-master/packages/vaex-arrow/setup.py",
"type": "Python"
} | import os
from setuptools import setup
from importlib.machinery import SourceFileLoader
dirname = os.path.dirname(__file__)
path_version = os.path.join(dirname, "vaex_arrow/_version.py")
version = SourceFileLoader('version', path_version).load_module()
name = 'vaex'
author = "Maarten A. Breddels"
author_email = "maa... | vaexioREPO_NAMEvaexPATH_START.@vaex_extracted@vaex-master@packages@vaex-arrow@setup.py@.PATH_END.py |
{
"filename": "_to_register.py",
"repo_name": "hgrecco/pint",
"repo_path": "pint_extracted/pint-master/pint/delegates/formatter/_to_register.py",
"type": "Python"
} | """
pint.delegates.formatter.base_formatter
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Common class and function for all formatters.
:copyright: 2022 by Pint Authors, see AUTHORS for more details.
:license: BSD, see LICENSE for more details.
"""
from __future__ import annotations
from collections.abc... | hgreccoREPO_NAMEpintPATH_START.@pint_extracted@pint-master@pint@delegates@formatter@_to_register.py@.PATH_END.py |
{
"filename": "_opacity.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/scatterternary/unselected/marker/_opacity.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class OpacityValidator(_plotly_utils.basevalidators.NumberValidator):
def __init__(
self,
plotly_name="opacity",
parent_name="scatterternary.unselected.marker",
**kwargs,
):
super(OpacityValidator, self).__init__(
plotly_n... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@scatterternary@unselected@marker@_opacity.py@.PATH_END.py |
{
"filename": "test_scattering.py",
"repo_name": "lwa-project/lsl",
"repo_path": "lsl_extracted/lsl-main/tests/test_scattering.py",
"type": "Python"
} | """
Unit test for the lsl.misc.scattering module.
"""
import os
import time
import warnings
import unittest
import numpy as np
from lsl.misc import scattering
__version__ = "0.1"
__author__ = "Jayce Dowell"
class scattering_tests(unittest.TestCase):
"""A unittest.TestCase collection of unit tests for the l... | lwa-projectREPO_NAMElslPATH_START.@lsl_extracted@lsl-main@tests@test_scattering.py@.PATH_END.py |
{
"filename": "select_1000_stars_andy.py",
"repo_name": "annayqho/TheCannon",
"repo_path": "TheCannon_extracted/TheCannon-master/code/lamost/li_giants/select_1000_stars_andy.py",
"type": "Python"
} | """ Randomly select 1,000 of the stars that meet Andy's criteria """
from astropy.table import Table
import sys
import numpy as np
datadir = "/Users/annaho/Github_Repositories/TheCannon/data/LAMOST/"
a = Table.read(datadir + "Mass_And_Age/Ho2017_Catalog.fits")
logg = a['logg'] > 3.5
feh = a['MH'] > -0.5
snr = a['SNR... | annayqhoREPO_NAMETheCannonPATH_START.@TheCannon_extracted@TheCannon-master@code@lamost@li_giants@select_1000_stars_andy.py@.PATH_END.py |
{
"filename": "ttGlyphPen.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/fonttools/fontTools/pens/ttGlyphPen.py",
"type": "Python"
} | from array import array
from typing import Any, Callable, Dict, Optional, Tuple
from fontTools.misc.fixedTools import MAX_F2DOT14, floatToFixedToFloat
from fontTools.misc.loggingTools import LogMixin
from fontTools.pens.pointPen import AbstractPointPen
from fontTools.misc.roundTools import otRound
from fontTools.pens.b... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@fonttools@fontTools@pens@ttGlyphPen.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "astropy/halotools",
"repo_path": "halotools_extracted/halotools-master/halotools/__init__.py",
"type": "Python"
} | """
Halotools is a specialized python package
for building and testing models of the galaxy-halo connection,
and analyzing catalogs of dark matter halos.
"""
from ._astropy_init import *
from . import custom_exceptions
def test_installation(*args, **kwargs):
kwargs.setdefault('args', '')
if kwargs['args']:
... | astropyREPO_NAMEhalotoolsPATH_START.@halotools_extracted@halotools-master@halotools@__init__.py@.PATH_END.py |
{
"filename": "galaxy.py",
"repo_name": "sdss/marvin",
"repo_path": "marvin_extracted/marvin-main/python/marvin/web/controllers/galaxy.py",
"type": "Python"
} | #!/usr/bin/env python
# encoding: utf-8
'''
Created by Brian Cherinka on 2016-04-08 14:31:34
Licensed under a 3-clause BSD license.
Revision History:
Initial Version: 2016-04-08 14:31:34 by Brian Cherinka
Last Modified On: 2016-04-08 14:31:34 by Brian
'''
from __future__ import division, print_function
impo... | sdssREPO_NAMEmarvinPATH_START.@marvin_extracted@marvin-main@python@marvin@web@controllers@galaxy.py@.PATH_END.py |
{
"filename": "kepler.py",
"repo_name": "KeplerGO/lightkurve",
"repo_path": "lightkurve_extracted/lightkurve-main/src/lightkurve/io/kepler.py",
"type": "Python"
} | """Reader for official Kepler light curve FITS files produced by the Ames pipeline."""
from ..lightcurve import KeplerLightCurve
from ..utils import KeplerQualityFlags
from .generic import read_generic_lightcurve
def read_kepler_lightcurve(
filename, flux_column="pdcsap_flux", quality_bitmask="default"
):
""... | KeplerGOREPO_NAMElightkurvePATH_START.@lightkurve_extracted@lightkurve-main@src@lightkurve@io@kepler.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "PrefectHQ/prefect",
"repo_path": "prefect_extracted/prefect-main/tests/utilities/schema_tools/__init__.py",
"type": "Python"
} | PrefectHQREPO_NAMEprefectPATH_START.@prefect_extracted@prefect-main@tests@utilities@schema_tools@__init__.py@.PATH_END.py | |
{
"filename": "ecdfplot.py",
"repo_name": "arviz-devs/arviz",
"repo_path": "arviz_extracted/arviz-main/arviz/plots/ecdfplot.py",
"type": "Python"
} | """Plot ecdf or ecdf-difference plot with confidence bands."""
import warnings
import numpy as np
from scipy.stats import uniform
try:
from scipy.stats import ecdf as scipy_ecdf
except ImportError:
scipy_ecdf = None
from ..rcparams import rcParams
from ..stats.ecdf_utils import ecdf_confidence_band, _get_ec... | arviz-devsREPO_NAMEarvizPATH_START.@arviz_extracted@arviz-main@arviz@plots@ecdfplot.py@.PATH_END.py |
{
"filename": "_textcase.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/funnel/hoverlabel/font/_textcase.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class TextcaseValidator(_plotly_utils.basevalidators.EnumeratedValidator):
def __init__(
self, plotly_name="textcase", parent_name="funnel.hoverlabel.font", **kwargs
):
super(TextcaseValidator, self).__init__(
plotly_name=plotly_name,
... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@funnel@hoverlabel@font@_textcase.py@.PATH_END.py |
{
"filename": "2022_06_17_204409_d335ad57d5ba_add_block_schema_indexes.py",
"repo_name": "PrefectHQ/prefect",
"repo_path": "prefect_extracted/prefect-main/src/prefect/server/database/_migrations/versions/postgresql/2022_06_17_204409_d335ad57d5ba_add_block_schema_indexes.py",
"type": "Python"
} | """Add block schema indexes
Revision ID: d335ad57d5ba
Revises: 61c76ee09e02
Create Date: 2022-06-17 20:44:09.726661
"""
from alembic import op
# revision identifiers, used by Alembic.
revision = "d335ad57d5ba"
down_revision = "61c76ee09e02"
branch_labels = None
depends_on = None
def upgrade():
# ### commands ... | PrefectHQREPO_NAMEprefectPATH_START.@prefect_extracted@prefect-main@src@prefect@server@database@_migrations@versions@postgresql@2022_06_17_204409_d335ad57d5ba_add_block_schema_indexes.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "pynbody/tangos",
"repo_path": "tangos_extracted/tangos-master/tangos/relation_finding/__init__.py",
"type": "Python"
} | from .multi_hop import MultiHopStrategy
from .multi_hop_variants import (
MultiHopAllProgenitorsStrategy,
MultiHopMajorDescendantsStrategy,
MultiHopMajorProgenitorsStrategy,
MultiHopMostRecentMergerStrategy,
)
from .multi_source import MultiSourceMultiHopStrategy
from .one_hop import HopMajorDescendantS... | pynbodyREPO_NAMEtangosPATH_START.@tangos_extracted@tangos-master@tangos@relation_finding@__init__.py@.PATH_END.py |
{
"filename": "vonmises.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/scipy/py2/scipy/stats/vonmises.py",
"type": "Python"
} | from __future__ import division, print_function, absolute_import
import numpy as np
import scipy.stats
from scipy.special import i0
def von_mises_cdf_series(k,x,p):
x = float(x)
s = np.sin(x)
c = np.cos(x)
sn = np.sin(p*x)
cn = np.cos(p*x)
R = 0
V = 0
for n in range(p-1,0,-1):
... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@scipy@py2@scipy@stats@vonmises.py@.PATH_END.py |
{
"filename": "cpFringe.py",
"repo_name": "lsst/cp_pipe",
"repo_path": "cp_pipe_extracted/cp_pipe-main/python/lsst/cp/pipe/cpFringe.py",
"type": "Python"
} | # This file is part of cp_pipe.
#
# Developed for the LSST Data Management System.
# This product includes software developed by the LSST Project
# (https://www.lsst.org).
# See the COPYRIGHT file at the top-level directory of this distribution
# for details of code ownership.
#
# This program is free software: you can... | lsstREPO_NAMEcp_pipePATH_START.@cp_pipe_extracted@cp_pipe-main@python@lsst@cp@pipe@cpFringe.py@.PATH_END.py |
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