metadata dict | text stringlengths 0 40.6M | id stringlengths 14 255 |
|---|---|---|
{
"filename": "xla_ops_grad.py",
"repo_name": "tensorflow/tensorflow",
"repo_path": "tensorflow_extracted/tensorflow-master/tensorflow/compiler/jit/ops/xla_ops_grad.py",
"type": "Python"
} | """Gradients for XLA ops."""
# Copyright 2018 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#... | tensorflowREPO_NAMEtensorflowPATH_START.@tensorflow_extracted@tensorflow-master@tensorflow@compiler@jit@ops@xla_ops_grad.py@.PATH_END.py |
{
"filename": "kde.py",
"repo_name": "scipy/scipy",
"repo_path": "scipy_extracted/scipy-main/scipy/stats/kde.py",
"type": "Python"
} | # This file is not meant for public use and will be removed in SciPy v2.0.0.
# Use the `scipy.stats` namespace for importing the functions
# included below.
from scipy._lib.deprecation import _sub_module_deprecation
__all__ = ["gaussian_kde"] # noqa: F822
def __dir__():
return __all__
def __getattr__(name):... | scipyREPO_NAMEscipyPATH_START.@scipy_extracted@scipy-main@scipy@stats@kde.py@.PATH_END.py |
{
"filename": "functions.py",
"repo_name": "saberyoung/haffet",
"repo_path": "haffet_extracted/haffet-master/sdapy/models/risepl/functions.py",
"type": "Python"
} | def powerlaw_post_baseline(times, t_0=0, amplitude=25, alpha_r=2):
''' power law function
'''
return amplitude * (times - t_0)**alpha_r
def powerlaw_full(times, t_0=0, amplitude=25, alpha_r=2, c=0):
''' power law fits (based on Miller et al, https://ui.adsabs.harvard.edu/abs/2020ApJ...902...47M/abstrac... | saberyoungREPO_NAMEhaffetPATH_START.@haffet_extracted@haffet-master@sdapy@models@risepl@functions.py@.PATH_END.py |
{
"filename": "test_psf_runners.py",
"repo_name": "esheldon/ngmix",
"repo_path": "ngmix_extracted/ngmix-master/ngmix/tests/test_psf_runners.py",
"type": "Python"
} | import pytest
import numpy as np
import ngmix
from ngmix.runners import PSFRunner
from ngmix.guessers import GMixPSFGuesser, SimplePSFGuesser, CoellipPSFGuesser
from ngmix.em import EMFitter
from ngmix.admom import AdmomFitter
from ngmix.fitting import CoellipFitter, Fitter
from ._sims import get_ngauss_obs, get_psf_ob... | esheldonREPO_NAMEngmixPATH_START.@ngmix_extracted@ngmix-master@ngmix@tests@test_psf_runners.py@.PATH_END.py |
{
"filename": "j1407.py",
"repo_name": "mkenworthy/exorings",
"repo_path": "exorings_extracted/exorings-master/j1407.py",
"type": "Python"
} | ''' custom routines for reading in J1407 data'''
from astropy.io import ascii
import numpy as np
from astropy.io import fits
def j1407_photom():
'read in J1407 photometry with errors'
dfile = '1SWASP+J140747.93-394542.6-detrend.fits'
# with pyfits.open(dfile) as fpin:
# tgtdata = fpin[1].data
h... | mkenworthyREPO_NAMEexoringsPATH_START.@exorings_extracted@exorings-master@j1407.py@.PATH_END.py |
{
"filename": "_lightposition.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/cone/_lightposition.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class LightpositionValidator(_plotly_utils.basevalidators.CompoundValidator):
def __init__(self, plotly_name="lightposition", parent_name="cone", **kwargs):
super(LightpositionValidator, self).__init__(
plotly_name=plotly_name,
parent_name=parent... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@cone@_lightposition.py@.PATH_END.py |
{
"filename": "indexing.py",
"repo_name": "google/jax",
"repo_path": "jax_extracted/jax-main/jax/_src/state/indexing.py",
"type": "Python"
} | # Copyright 2023 The JAX Authors.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# https://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in wri... | googleREPO_NAMEjaxPATH_START.@jax_extracted@jax-main@jax@_src@state@indexing.py@.PATH_END.py |
{
"filename": "_opacitysrc.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py2/plotly/validators/choroplethmapbox/marker/_opacitysrc.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class OpacitysrcValidator(_plotly_utils.basevalidators.SrcValidator):
def __init__(
self, plotly_name="opacitysrc", parent_name="choroplethmapbox.marker", **kwargs
):
super(OpacitysrcValidator, self).__init__(
plotly_name=plotly_name,
... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py2@plotly@validators@choroplethmapbox@marker@_opacitysrc.py@.PATH_END.py |
{
"filename": "_style.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/bar/hoverlabel/font/_style.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class StyleValidator(_plotly_utils.basevalidators.EnumeratedValidator):
def __init__(
self, plotly_name="style", parent_name="bar.hoverlabel.font", **kwargs
):
super(StyleValidator, self).__init__(
plotly_name=plotly_name,
parent_name... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@bar@hoverlabel@font@_style.py@.PATH_END.py |
{
"filename": "_thickness.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/scatter/error_x/_thickness.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class ThicknessValidator(_plotly_utils.basevalidators.NumberValidator):
def __init__(
self, plotly_name="thickness", parent_name="scatter.error_x", **kwargs
):
super(ThicknessValidator, self).__init__(
plotly_name=plotly_name,
parent_... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@scatter@error_x@_thickness.py@.PATH_END.py |
{
"filename": "test_enh2xyz.py",
"repo_name": "JLBLine/WODEN",
"repo_path": "WODEN_extracted/WODEN-master/cmake_testing/wodenpy/array_layout/test_enh2xyz.py",
"type": "Python"
} | from sys import path
import os
import unittest
import numpy as np
from wodenpy.array_layout import create_array_layout
D2R = np.pi / 180.0
##Vehicle for running tests
class Test(unittest.TestCase):
def test_enh2xyz(self):
"""Tests the `create_array_layout.enh2xyz` function, which should calculate the
... | JLBLineREPO_NAMEWODENPATH_START.@WODEN_extracted@WODEN-master@cmake_testing@wodenpy@array_layout@test_enh2xyz.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "saberyoung/haffet",
"repo_path": "haffet_extracted/haffet-master/sdapy/models/polynomial/__init__.py",
"type": "Python"
} | """Initilization modules."""
import os
path = os.path.dirname(os.path.abspath(__file__))
__all__ = []
for py in [
f[:-3] for f in os.listdir(path)
if f.endswith('.py') and f != '__init__.py'
]:
__all__.append(py)
from .functions import *
| saberyoungREPO_NAMEhaffetPATH_START.@haffet_extracted@haffet-master@sdapy@models@polynomial@__init__.py@.PATH_END.py |
{
"filename": "light_curve_collection.py",
"repo_name": "golmschenk/generalized-photometric-neural-network-experiments",
"repo_path": "generalized-photometric-neural-network-experiments_extracted/generalized-photometric-neural-network-experiments-main/generalized_photometric_neural_network_experiments/dataset/fla... | """
Code to represent a collection of light curves.
"""
import shutil
import socket
import re
from filelock import FileLock
from typing import Union, Iterable, Optional, List
import numpy as np
import pandas as pd
from pathlib import Path
from generalized_photometric_neural_network_experiments.dataset.flare.genera... | LONG_NAME_79.py |
{
"filename": "README.md",
"repo_name": "mbejger/polgraw-allsky",
"repo_path": "polgraw-allsky_extracted/polgraw-allsky-master/search/network/src-openmp/lib/README.md",
"type": "Markdown"
} | This directory contains external libraries we use for vectorization:
SLEEF by Naoki Shibata: http://shibatch.sourceforge.net/
Yeppp! : http://www.yeppp.info/
| mbejgerREPO_NAMEpolgraw-allskyPATH_START.@polgraw-allsky_extracted@polgraw-allsky-master@search@network@src-openmp@lib@README.md@.PATH_END.py |
{
"filename": "asp_system_utils.py",
"repo_name": "NeoGeographyToolkit/StereoPipeline",
"repo_path": "StereoPipeline_extracted/StereoPipeline-master/src/asp/Python/asp_system_utils.py",
"type": "Python"
} | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# __BEGIN_LICENSE__
# Copyright (c) 2009-2013, United States Government as represented by the
# Administrator of the National Aeronautics and Space Administration. All
# rights reserved.
#
# The NGT platform is licensed under the Apache License, Version 2.0 (the
# "Lic... | NeoGeographyToolkitREPO_NAMEStereoPipelinePATH_START.@StereoPipeline_extracted@StereoPipeline-master@src@asp@Python@asp_system_utils.py@.PATH_END.py |
{
"filename": "utils.py",
"repo_name": "florpi/sunbird",
"repo_path": "sunbird_extracted/sunbird-main/sunbird/utils.py",
"type": "Python"
} | # taken from https://github.com/cosmodesi/desilike/blob/main/desilike/utils.py
import numpy as np
import logging
import sys
import os
import time
import traceback
def setup_logging(level=logging.INFO, stream=sys.stdout, filename=None, filemode='w', **kwargs):
"""
Set up logging.
Parameters
----------... | florpiREPO_NAMEsunbirdPATH_START.@sunbird_extracted@sunbird-main@sunbird@utils.py@.PATH_END.py |
{
"filename": "KuzminDiskPotential.py",
"repo_name": "jobovy/galpy",
"repo_path": "galpy_extracted/galpy-main/galpy/potential/KuzminDiskPotential.py",
"type": "Python"
} | ###############################################################################
# KuzminDiskPotential.py: class that implements Kuzmin disk potential
#
# - amp
# Phi(R, z)= ---------------------------
# \sqrt{R^2 + (a + |z|)^2}
##############... | jobovyREPO_NAMEgalpyPATH_START.@galpy_extracted@galpy-main@galpy@potential@KuzminDiskPotential.py@.PATH_END.py |
{
"filename": "train.md",
"repo_name": "ML4GW/aframe",
"repo_path": "aframe_extracted/aframe-main/docs/projects/train.md",
"type": "Markdown"
} | Train
=====
Training Aframe networks using [PyTorch Lightning](https://lightning.ai/docs/pytorch/stable/) and hyper-parameter tuning using [Ray Tune](https://docs.ray.io/en/latest/tune/index.html)
## Environment
The `train` project environment is manged by `poetry`.
In the root of the `train` project, run
```bash
a... | ML4GWREPO_NAMEaframePATH_START.@aframe_extracted@aframe-main@docs@projects@train.md@.PATH_END.py |
{
"filename": "_font.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/graph_objs/layout/polar/radialaxis/title/_font.py",
"type": "Python"
} | from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
# class properties
# --------------------
_parent_path_str = "layout.polar.radialaxis.title"
_path_str = "layout.polar.radialaxis.title.font"
_valid_prop... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@graph_objs@layout@polar@radialaxis@title@_font.py@.PATH_END.py |
{
"filename": "_make.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/attrs/py2/attr/_make.py",
"type": "Python"
} | from __future__ import absolute_import, division, print_function
import copy
import inspect
import linecache
import sys
import threading
import uuid
import warnings
from operator import itemgetter
from . import _config, setters
from ._compat import (
PY2,
PYPY,
isclass,
iteritems,
metadata_proxy,... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@attrs@py2@attr@_make.py@.PATH_END.py |
{
"filename": "__version__.py",
"repo_name": "ryanhausen/fitsmap",
"repo_path": "fitsmap_extracted/fitsmap-master/fitsmap/__version__.py",
"type": "Python"
} | """0.11.1"""
| ryanhausenREPO_NAMEfitsmapPATH_START.@fitsmap_extracted@fitsmap-master@fitsmap@__version__.py@.PATH_END.py |
{
"filename": "select_samples.py",
"repo_name": "desihub/LSS",
"repo_path": "LSS_extracted/LSS-main/Sandbox/imaging/select_samples.py",
"type": "Python"
} | import fitsio
from astropy.table import Table,join,vstack
import numpy as np
import glob
import os
import sys
from desitarget import cuts
from desitarget import targetmask
import astropy.io.fits as fits
dirsweeps = '/global/project/projectdirs/cosmo/data/legacysurvey/dr9/south/sweep/9.0/'
dirsweepn = '/global/project/... | desihubREPO_NAMELSSPATH_START.@LSS_extracted@LSS-main@Sandbox@imaging@select_samples.py@.PATH_END.py |
{
"filename": "test_cco_buf_inter.py",
"repo_name": "mpi4py/mpi4py",
"repo_path": "mpi4py_extracted/mpi4py-master/test/test_cco_buf_inter.py",
"type": "Python"
} | from mpi4py import MPI
import mpiunittest as unittest
import arrayimpl
def skip_op(typecode, op):
if typecode in '?':
return True
if typecode in 'FDG':
if op in (MPI.MAX, MPI.MIN):
return True
return False
def maxvalue(a):
try:
typecode = a.typecode
except Attri... | mpi4pyREPO_NAMEmpi4pyPATH_START.@mpi4py_extracted@mpi4py-master@test@test_cco_buf_inter.py@.PATH_END.py |
{
"filename": "_activeselection.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/graph_objs/layout/_activeselection.py",
"type": "Python"
} | from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Activeselection(_BaseLayoutHierarchyType):
# class properties
# --------------------
_parent_path_str = "layout"
_path_str = "layout.activeselection"
_valid_props = {"fillcolor", "opaci... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@graph_objs@layout@_activeselection.py@.PATH_END.py |
{
"filename": "python-reference_utils_get_confusion_matrix.md",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/catboost/docs/en/concepts/python-reference_utils_get_confusion_matrix.md",
"type": "Markdown"
} | # get_confusion_matrix
{% include [utils-get_confusion_matrix__desc](../_includes/work_src/reusage-python/get_confusion_matrix__desc.md) %}
## {{ dl--invoke-format }} {#method-call-format}
```python
get_confusion_matrix(model, data, thread_count)
```
## {{ dl--parameters }} {#parameters-list}
### model
#### Desc... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@catboost@docs@en@concepts@python-reference_utils_get_confusion_matrix.md@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "lsst-ts/ts_wep",
"repo_path": "ts_wep_extracted/ts_wep-main/python/lsst/ts/wep/deblend/__init__.py",
"type": "Python"
} | # -*- coding: utf-8 -*-
from .deblendAdapt import *
from .deblendDefault import *
from .deblendDonutFactory import *
from .nelderMeadModify import *
| lsst-tsREPO_NAMEts_wepPATH_START.@ts_wep_extracted@ts_wep-main@python@lsst@ts@wep@deblend@__init__.py@.PATH_END.py |
{
"filename": "test_sky_stacking.py",
"repo_name": "GeminiDRSoftware/DRAGONS",
"repo_path": "DRAGONS_extracted/DRAGONS-master/geminidr/f2/tests/longslit/test_sky_stacking.py",
"type": "Python"
} | #!/usr/bin/env python3
"""
Tests for sky stacking and subtraction for F2.
"""
import pytest
import astrodata
from astrodata.testing import download_from_archive
import gemini_instruments
from geminidr.f2.primitives_f2_longslit import F2Longslit
# ---- Fixtures --------------------------------------------------------... | GeminiDRSoftwareREPO_NAMEDRAGONSPATH_START.@DRAGONS_extracted@DRAGONS-master@geminidr@f2@tests@longslit@test_sky_stacking.py@.PATH_END.py |
{
"filename": "widget_upload.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/ipywidgets/py3/ipywidgets/widgets/widget_upload.py",
"type": "Python"
} | # Copyright(c) Jupyter Development Team.
# Distributed under the terms of the Modified BSD License.
"""FileUpload class.
Represents a file upload button.
"""
import datetime as dt
from traitlets import (
observe, default, Unicode, Dict, Int, Bool, Bytes, CaselessStrEnum
)
from .widget_description import Descrip... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@ipywidgets@py3@ipywidgets@widgets@widget_upload.py@.PATH_END.py |
{
"filename": "(5.1) delta Scuti SNR.ipynb",
"repo_name": "danhey/maelstrom",
"repo_path": "maelstrom_extracted/maelstrom-master/paper/notebooks/(5.1) delta Scuti SNR.ipynb",
"type": "Jupyter Notebook"
} | ```python
%run setup.py
```
```python
df = pd.read_csv('../../../../Dropbox (Sydney Uni)/Shared/pulsator_fraction/all_stars_with_gaia_mathur_green.csv')
puls = df[df['pulsating']==1]
```
Let's count the number of TESS CVZ stars with 2 min data
```python
files = []
import glob
for sector in list(range(1,14)):
... | danheyREPO_NAMEmaelstromPATH_START.@maelstrom_extracted@maelstrom-master@paper@notebooks@(5.1) delta Scuti SNR.ipynb@.PATH_END.py |
{
"filename": "TestNLFitters.py",
"repo_name": "dokester/BayesicFitting",
"repo_path": "BayesicFitting_extracted/BayesicFitting-master/BayesicFitting/test/TestNLFitters.py",
"type": "Python"
} | # run with : python3 -m unittest TestNLFitters
import unittest
import os
import numpy as numpy
from numpy.testing import assert_array_almost_equal as assertAAE
from astropy import units
import math
import matplotlib.pyplot as plt
from BayesicFitting import *
from StdTests import stdFittertest
__author__ = "Do Kest... | dokesterREPO_NAMEBayesicFittingPATH_START.@BayesicFitting_extracted@BayesicFitting-master@BayesicFitting@test@TestNLFitters.py@.PATH_END.py |
{
"filename": "pipes.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/tools/python3/Lib/pipes.py",
"type": "Python"
} | """Conversion pipeline templates.
The problem:
------------
Suppose you have some data that you want to convert to another format,
such as from GIF image format to PPM image format. Maybe the
conversion involves several steps (e.g. piping it through compress or
uuencode). Some of the conversion steps may require th... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@tools@python3@Lib@pipes.py@.PATH_END.py |
{
"filename": "results.py",
"repo_name": "sdss/marvin",
"repo_path": "marvin_extracted/marvin-main/python/marvin/tools/results.py",
"type": "Python"
} | #!/usr/bin/env python
# encoding: utf-8
# Licensed under a 3-clause BSD license.
#
from __future__ import print_function
import copy
import datetime
import json
import os
import warnings
from collections import namedtuple
from functools import wraps
from operator import add
import numpy as np
import six
from astrop... | sdssREPO_NAMEmarvinPATH_START.@marvin_extracted@marvin-main@python@marvin@tools@results.py@.PATH_END.py |
{
"filename": "_size.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/histogram2dcontour/colorbar/title/font/_size.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class SizeValidator(_plotly_utils.basevalidators.NumberValidator):
def __init__(
self,
plotly_name="size",
parent_name="histogram2dcontour.colorbar.title.font",
**kwargs,
):
super(SizeValidator, self).__init__(
plotly_name... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@histogram2dcontour@colorbar@title@font@_size.py@.PATH_END.py |
{
"filename": "_include.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/layout/xaxis/autorangeoptions/_include.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class IncludeValidator(_plotly_utils.basevalidators.AnyValidator):
def __init__(
self,
plotly_name="include",
parent_name="layout.xaxis.autorangeoptions",
**kwargs,
):
super(IncludeValidator, self).__init__(
plotly_name=pl... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@layout@xaxis@autorangeoptions@_include.py@.PATH_END.py |
{
"filename": "design_description.md",
"repo_name": "MazinLab/MKIDGen3",
"repo_path": "MKIDGen3_extracted/MKIDGen3-main/docs/design_description.md",
"type": "Markdown"
} | # MKIDGEN3 Software Design Description
## Overview
The MKIDGEN3 software facilitates using multiple hardware subsystems (RFSoC board, IF board) to set up and read out an MKID array.
The core functionality revolves around capturing data at various points in the FPGA DSP pipeline.
Captures are facilitated by `capture r... | MazinLabREPO_NAMEMKIDGen3PATH_START.@MKIDGen3_extracted@MKIDGen3-main@docs@design_description.md@.PATH_END.py |
{
"filename": "_fgopacity.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/icicle/marker/pattern/_fgopacity.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class FgopacityValidator(_plotly_utils.basevalidators.NumberValidator):
def __init__(
self, plotly_name="fgopacity", parent_name="icicle.marker.pattern", **kwargs
):
super(FgopacityValidator, self).__init__(
plotly_name=plotly_name,
p... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@icicle@marker@pattern@_fgopacity.py@.PATH_END.py |
{
"filename": "stage_2.py",
"repo_name": "jdhenshaw/scousepy",
"repo_path": "scousepy_extracted/scousepy-master/scousepy/stage_2.py",
"type": "Python"
} | # Licensed under an MIT open source license - see LICENSE
import numpy as np
def generate_saa_list(scouseobject):
"""
Returns a list constaining all spectral averaging areas.
Parameters
----------
scouseobject : Instance of the scousepy class
"""
saa_list=[]
for i in range(len(scouseob... | jdhenshawREPO_NAMEscousepyPATH_START.@scousepy_extracted@scousepy-master@scousepy@stage_2.py@.PATH_END.py |
{
"filename": "_shadow.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/bar/outsidetextfont/_shadow.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class ShadowValidator(_plotly_utils.basevalidators.StringValidator):
def __init__(
self, plotly_name="shadow", parent_name="bar.outsidetextfont", **kwargs
):
super(ShadowValidator, self).__init__(
plotly_name=plotly_name,
parent_name=... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@bar@outsidetextfont@_shadow.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "sibirrer/lenstronomy",
"repo_path": "lenstronomy_extracted/lenstronomy-main/lenstronomy/LensModel/__init__.py",
"type": "Python"
} | sibirrerREPO_NAMElenstronomyPATH_START.@lenstronomy_extracted@lenstronomy-main@lenstronomy@LensModel@__init__.py@.PATH_END.py | |
{
"filename": "batlib.py",
"repo_name": "parsotat/batanalysis",
"repo_path": "batanalysis_extracted/batanalysis-main/batanalysis/batlib.py",
"type": "Python"
} | """
This file holds various functions that users can call to interface with bat observation objects
"""
import astropy as ap
from astropy.io import fits
from astropy.time import Time
import numpy as np
import shutil
import matplotlib.pyplot as plt
import os
import warnings
from pathlib import Path
import requests
from ... | parsotatREPO_NAMEbatanalysisPATH_START.@batanalysis_extracted@batanalysis-main@batanalysis@batlib.py@.PATH_END.py |
{
"filename": "publish.py",
"repo_name": "dfm/exopop",
"repo_path": "exopop_extracted/exopop-main/document/publish.py",
"type": "Python"
} | #!/usr/bin/env python
# -*- coding: utf-8 -*-
from __future__ import division, print_function
import os
import glob
import shutil
from datetime import date
from itertools import imap
from subprocess import check_call
datestamp = date.today().strftime("%m%d")
TMPDIR = "fore" + datestamp
outfn = TMPDIR+".tar"
tex = ope... | dfmREPO_NAMEexopopPATH_START.@exopop_extracted@exopop-main@document@publish.py@.PATH_END.py |
{
"filename": "check.py",
"repo_name": "ajeldorado/falco-python",
"repo_path": "falco-python_extracted/falco-python-master/falco/check.py",
"type": "Python"
} | """
Module to hold input-checking functions to minimize repetition
"""
import numbers
import numpy as np
class CheckException(Exception):
pass
# String check support
string_types = (str, bytes)
# Int check support
int_types = (int, np.integer)
def _checkname(vname):
"""
Internal check that we can use ... | ajeldoradoREPO_NAMEfalco-pythonPATH_START.@falco-python_extracted@falco-python-master@falco@check.py@.PATH_END.py |
{
"filename": "test_ogle_remote.py",
"repo_name": "astropy/astroquery",
"repo_path": "astroquery_extracted/astroquery-main/astroquery/ogle/tests/test_ogle_remote.py",
"type": "Python"
} |
import pytest
import astropy.units as u
from astropy.coordinates import SkyCoord
from astropy.utils.exceptions import AstropyDeprecationWarning
from .. import Ogle
@pytest.mark.remote_data
def test_ogle_single():
co = SkyCoord(0, 3, unit=(u.degree, u.degree), frame='galactic')
response = Ogle.query_region(c... | astropyREPO_NAMEastroqueryPATH_START.@astroquery_extracted@astroquery-main@astroquery@ogle@tests@test_ogle_remote.py@.PATH_END.py |
{
"filename": "_size.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/cone/colorbar/tickfont/_size.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class SizeValidator(_plotly_utils.basevalidators.NumberValidator):
def __init__(
self, plotly_name="size", parent_name="cone.colorbar.tickfont", **kwargs
):
super(SizeValidator, self).__init__(
plotly_name=plotly_name,
parent_name=par... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@cone@colorbar@tickfont@_size.py@.PATH_END.py |
{
"filename": "_weight.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/layout/smith/realaxis/tickfont/_weight.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class WeightValidator(_plotly_utils.basevalidators.IntegerValidator):
def __init__(
self,
plotly_name="weight",
parent_name="layout.smith.realaxis.tickfont",
**kwargs,
):
super(WeightValidator, self).__init__(
plotly_name=... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@layout@smith@realaxis@tickfont@_weight.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "PrefectHQ/prefect",
"repo_path": "prefect_extracted/prefect-main/src/integrations/prefect-gcp/prefect_gcp/models/__init__.py",
"type": "Python"
} | PrefectHQREPO_NAMEprefectPATH_START.@prefect_extracted@prefect-main@src@integrations@prefect-gcp@prefect_gcp@models@__init__.py@.PATH_END.py | |
{
"filename": "lbfgsb.py",
"repo_name": "waynebhayes/SpArcFiRe",
"repo_path": "SpArcFiRe_extracted/SpArcFiRe-master/scripts/SpArcFiRe-pyvenv/lib/python2.7/site-packages/scipy/optimize/lbfgsb.py",
"type": "Python"
} | """
Functions
---------
.. autosummary::
:toctree: generated/
fmin_l_bfgs_b
"""
## License for the Python wrapper
## ==============================
## Copyright (c) 2004 David M. Cooke <cookedm@physics.mcmaster.ca>
## Permission is hereby granted, free of charge, to any person obtaining a
## copy of this so... | waynebhayesREPO_NAMESpArcFiRePATH_START.@SpArcFiRe_extracted@SpArcFiRe-master@scripts@SpArcFiRe-pyvenv@lib@python2.7@site-packages@scipy@optimize@lbfgsb.py@.PATH_END.py |
{
"filename": "basic_plot.py",
"repo_name": "pyspeckit/pyspeckit",
"repo_path": "pyspeckit_extracted/pyspeckit-master/docs/basic_plot.py",
"type": "Python"
} | import numpy as np
from astropy import units as u
import pyspeckit
xaxis = np.linspace(-50,150,100.) * u.km/u.s
sigma = 10. * u.km/u.s
center = 50. * u.km/u.s
synth_data = np.exp(-(xaxis-center)**2/(sigma**2 * 2.))
# Add noise
stddev = 0.1
noise = np.random.randn(xaxis.size)*stddev
error = stddev*np.ones_like(synth_d... | pyspeckitREPO_NAMEpyspeckitPATH_START.@pyspeckit_extracted@pyspeckit-master@docs@basic_plot.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "djones1040/PythonPhot",
"repo_path": "PythonPhot_extracted/PythonPhot-master/PythonPhot/tests/__init__.py",
"type": "Python"
} | # Licensed under a 3-clause BSD style license - see LICENSE.rst
"""
This packages contains affiliated package tests.
"""
| djones1040REPO_NAMEPythonPhotPATH_START.@PythonPhot_extracted@PythonPhot-master@PythonPhot@tests@__init__.py@.PATH_END.py |
{
"filename": "README.md",
"repo_name": "zivmaaya/NeuralCMS",
"repo_path": "NeuralCMS_extracted/NeuralCMS-main/README.md",
"type": "Markdown"
} | # NeuralCMS
NeuralCMS is a machine-learning model to compute the gravitational moments and mass of Jupiter given seven chosen parameters setting its interior model. The model is trained on over a million interior model solutions computed with the accurate but computationally demanding concentric Maclaurin spheroid met... | zivmaayaREPO_NAMENeuralCMSPATH_START.@NeuralCMS_extracted@NeuralCMS-main@README.md@.PATH_END.py |
{
"filename": "fused_attention_stablehlo.py",
"repo_name": "google/jax",
"repo_path": "jax_extracted/jax-main/jax/_src/cudnn/fused_attention_stablehlo.py",
"type": "Python"
} | # Copyright 2024 The JAX Authors.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# https://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in wri... | googleREPO_NAMEjaxPATH_START.@jax_extracted@jax-main@jax@_src@cudnn@fused_attention_stablehlo.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "guillochon/MOSFiT",
"repo_path": "MOSFiT_extracted/MOSFiT-master/mosfit/modules/seds/__init__.py",
"type": "Python"
} | """Initilization procedure for `SED` modules."""
import inspect
import os
import sys
path = os.path.dirname(os.path.abspath(__file__))
__all__ = []
for py in [
f[:-3] for f in os.listdir(path)
if f.endswith('.py') and f != '__init__.py'
]:
mod = __import__('.'.join([__name__, py]), fromlist=[py])
... | guillochonREPO_NAMEMOSFiTPATH_START.@MOSFiT_extracted@MOSFiT-master@mosfit@modules@seds@__init__.py@.PATH_END.py |
{
"filename": "huber.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/scikit-learn/py2/sklearn/linear_model/huber.py",
"type": "Python"
} | # Authors: Manoj Kumar mks542@nyu.edu
# License: BSD 3 clause
import numpy as np
from scipy import optimize, sparse
from ..base import BaseEstimator, RegressorMixin
from .base import LinearModel
from ..utils import check_X_y
from ..utils import check_consistent_length
from ..utils import axis0_safe_slice
from ..util... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@scikit-learn@py2@sklearn@linear_model@huber.py@.PATH_END.py |
{
"filename": "test_centroidOtsu.py",
"repo_name": "lsst-ts/ts_wep",
"repo_path": "ts_wep_extracted/ts_wep-main/tests/centroid/test_centroidOtsu.py",
"type": "Python"
} | # This file is part of ts_wep.
#
# Developed for the LSST Telescope and Site Systems.
# This product includes software developed by the LSST Project
# (https://www.lsst.org).
# See the COPYRIGHT file at the top-level directory of this distribution
# for details of code ownership.
#
# This program is free software: you ... | lsst-tsREPO_NAMEts_wepPATH_START.@ts_wep_extracted@ts_wep-main@tests@centroid@test_centroidOtsu.py@.PATH_END.py |
{
"filename": "_font.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/graph_objs/layout/slider/_font.py",
"type": "Python"
} | from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
# class properties
# --------------------
_parent_path_str = "layout.slider"
_path_str = "layout.slider.font"
_valid_props = {
"color",
"... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@graph_objs@layout@slider@_font.py@.PATH_END.py |
{
"filename": "_coloraxis.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py2/plotly/validators/scatterternary/marker/_coloraxis.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class ColoraxisValidator(_plotly_utils.basevalidators.SubplotidValidator):
def __init__(
self, plotly_name="coloraxis", parent_name="scatterternary.marker", **kwargs
):
super(ColoraxisValidator, self).__init__(
plotly_name=plotly_name,
... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py2@plotly@validators@scatterternary@marker@_coloraxis.py@.PATH_END.py |
{
"filename": "read_gnu.py",
"repo_name": "AMReX-Astro/Castro",
"repo_path": "Castro_extracted/Castro-main/Exec/radiation_tests/RadSuOlsonMG/python/read_gnu.py",
"type": "Python"
} | #!/usr/bin/python
from numpy import *
def read_gnu_file(filenm):
x = []
y = []
f = open(filenm, 'r')
line = f.readline()
t = float(line.split('"')[1].split('=')[2])
for line in f.readlines():
if not line[0] == ";":
words = line.split()
x.append(float(words[0]))
... | AMReX-AstroREPO_NAMECastroPATH_START.@Castro_extracted@Castro-main@Exec@radiation_tests@RadSuOlsonMG@python@read_gnu.py@.PATH_END.py |
{
"filename": "retrieve_fake_fsps_data.py",
"repo_name": "ArgonneCPAC/dsps",
"repo_path": "dsps_extracted/dsps-main/dsps/data_loaders/retrieve_fake_fsps_data.py",
"type": "Python"
} | """
"""
import numpy as np
from jax.scipy.stats import norm
import os
from .defaults import SSPData
_THIS_DRNAME = os.path.dirname(os.path.abspath(__file__))
def load_fake_ssp_data():
ssp_lgmet = _get_lgzlegend()
ssp_lg_age_gyr = _get_log_age_gyr()
ssp_wave = _get_ssp_wave()
ssp_flux = _get_spec_ssp... | ArgonneCPACREPO_NAMEdspsPATH_START.@dsps_extracted@dsps-main@dsps@data_loaders@retrieve_fake_fsps_data.py@.PATH_END.py |
{
"filename": "logical_operations.py",
"repo_name": "cds-astro/mocpy",
"repo_path": "mocpy_extracted/mocpy-master/docs/examples/logical_operations.py",
"type": "Python"
} | import matplotlib.pyplot as plt
from astropy.visualization.wcsaxes.frame import EllipticalFrame
from astropy.wcs import WCS
from mocpy import MOC
# Load Galex and SDSS
sdss = MOC.from_fits("./../../resources/P-SDSS9-r.fits")
galex = MOC.from_fits("./../../resources/P-GALEXGR6-AIS-FUV.fits")
# Compute their intersectio... | cds-astroREPO_NAMEmocpyPATH_START.@mocpy_extracted@mocpy-master@docs@examples@logical_operations.py@.PATH_END.py |
{
"filename": "config.py",
"repo_name": "SatoshiHamano/WARP",
"repo_path": "WARP_extracted/WARP-main/warp/config.py",
"type": "Python"
} | #!/usr/bin/env python
# -*- coding:utf-8 -*-
import os.path
from astropy.io import fits
import sys
import numpy as np
from warp.Spec2Dtools import header_key_read
import traceback
def alternativequestion(question, anss, defans):
flagans = False
while not flagans:
ansinput = input(question)
if ... | SatoshiHamanoREPO_NAMEWARPPATH_START.@WARP_extracted@WARP-main@warp@config.py@.PATH_END.py |
{
"filename": "msk.py",
"repo_name": "cvxopt/cvxopt",
"repo_path": "cvxopt_extracted/cvxopt-master/src/python/msk.py",
"type": "Python"
} | """
CVXOPT interface for MOSEK 8
"""
# Copyright 2012-2023 M. Andersen and L. Vandenberghe.
# Copyright 2010-2011 L. Vandenberghe.
# Copyright 2004-2009 J. Dahl and L. Vandenberghe.
#
# This file is part of CVXOPT.
#
# CVXOPT is free software; you can redistribute it and/or modify
# it under the terms of the GNU Gener... | cvxoptREPO_NAMEcvxoptPATH_START.@cvxopt_extracted@cvxopt-master@src@python@msk.py@.PATH_END.py |
{
"filename": "export.py",
"repo_name": "vterron/lemon",
"repo_path": "lemon_extracted/lemon-master/export.py",
"type": "Python"
} | #! /usr/bin/env python2
# encoding: UTF-8
# Author: Victor Terron (c) 2020
# Email: `echo vt2rron1iaa32s | tr 132 @.e`
# License: GNU GPLv3
from __future__ import division
from __future__ import print_function
from __future__ import absolute_import
from __future__ import unicode_literals
_DESCRIPTION = """
Print the... | vterronREPO_NAMElemonPATH_START.@lemon_extracted@lemon-master@export.py@.PATH_END.py |
{
"filename": "ah_bootstrap.py",
"repo_name": "astropy/astroquery",
"repo_path": "astroquery_extracted/astroquery-main/ah_bootstrap.py",
"type": "Python"
} | """
This bootstrap module contains code for ensuring that the astropy_helpers
package will be importable by the time the setup.py script runs. It also
includes some workarounds to ensure that a recent-enough version of setuptools
is being used for the installation.
This module should be the first thing imported in th... | astropyREPO_NAMEastroqueryPATH_START.@astroquery_extracted@astroquery-main@ah_bootstrap.py@.PATH_END.py |
{
"filename": "README.md",
"repo_name": "rodluger/planetplanet",
"repo_path": "planetplanet_extracted/planetplanet-master/README.md",
"type": "Markdown"
} | <div align="center">
<img src="https://rodluger.github.io/planetplanet/_images/title.gif" width="400px">
</img>
<br/><br/>
<p><a href="https://travis-ci.org/rodluger/planetplanet"><img src="https://travis-ci.org/rodluger/planetplanet.svg?branch=master"/></a>
<a href="http://dx.doi.org/10.5281/zenodo.997391"><img src="h... | rodlugerREPO_NAMEplanetplanetPATH_START.@planetplanet_extracted@planetplanet-master@README.md@.PATH_END.py |
{
"filename": "test_corrs.py",
"repo_name": "astropy/astropy",
"repo_path": "astropy_extracted/astropy-main/astropy/time/tests/test_corrs.py",
"type": "Python"
} | # Licensed under a 3-clause BSD style license - see LICENSE.rst
import pytest
from astropy import units as u
from astropy.coordinates import EarthLocation, SkyCoord, solar_system_ephemeris
from astropy.time import Time, TimeDelta
from astropy.utils import iers
from astropy.utils.compat.optional_deps import HAS_JPLEPHE... | astropyREPO_NAMEastropyPATH_START.@astropy_extracted@astropy-main@astropy@time@tests@test_corrs.py@.PATH_END.py |
{
"filename": "README.md",
"repo_name": "dnarayanan/powderday",
"repo_path": "powderday_extracted/powderday-master/README.md",
"type": "Markdown"
} | Welcome to Powderday!
Powderday is a dust radiative transfer package designed to interface
with galaxy formation simulations in order to produce spectral energy
distributions, as well as realistic images.
For documentation, please see the docs at:
[http://powderday.readthedocs.org](http://powderday.readthedocs.org... | dnarayananREPO_NAMEpowderdayPATH_START.@powderday_extracted@powderday-master@README.md@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/sunburst/marker/__init__.py",
"type": "Python"
} | import sys
from typing import TYPE_CHECKING
if sys.version_info < (3, 7) or TYPE_CHECKING:
from ._showscale import ShowscaleValidator
from ._reversescale import ReversescaleValidator
from ._pattern import PatternValidator
from ._line import LineValidator
from ._colorssrc import ColorssrcValidator
... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@sunburst@marker@__init__.py@.PATH_END.py |
{
"filename": "actor.py",
"repo_name": "enthought/mayavi",
"repo_path": "mayavi_extracted/mayavi-master/mayavi/components/actor.py",
"type": "Python"
} | """A simple actor component.
"""
# Author: Prabhu Ramachandran <prabhu_r@users.sf.net>
# Copyright (c) 2005-2020, Enthought, Inc.
# License: BSD Style.
import vtk
# Enthought library imports.
from traits.api import Instance, Bool, Enum
from tvtk.api import tvtk
from traits.api import DelegatesTo
# Local imports.
fr... | enthoughtREPO_NAMEmayaviPATH_START.@mayavi_extracted@mayavi-master@mayavi@components@actor.py@.PATH_END.py |
{
"filename": "Space.py",
"repo_name": "ledatelescope/bifrost",
"repo_path": "bifrost_extracted/bifrost-master/python/bifrost/Space.py",
"type": "Python"
} |
# Copyright (c) 2016-2023, The Bifrost Authors. All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions
# are met:
# * Redistributions of source code must retain the above copyright
# notice, this list of conditi... | ledatelescopeREPO_NAMEbifrostPATH_START.@bifrost_extracted@bifrost-master@python@bifrost@Space.py@.PATH_END.py |
{
"filename": "mrsa.py",
"repo_name": "HajimeKawahara/sot",
"repo_path": "sot_extracted/sot-master/src/sot/nmfmap/mrsa.py",
"type": "Python"
} | import numpy as np
def mrsa(vec1,vec2):
v1=(vec1-np.mean(vec1))
v2=(vec2-np.mean(vec2))
v1norm=np.sqrt(np.dot(v1,v1))
v2norm=np.sqrt(np.dot(v2,v2))
naib=np.dot(v1,v2)/v1norm/v2norm
if naib>1.0:
naib=1.0
return 1.0/np.pi*np.arccos(naib)
def mrsa_meanX(X):
Xini=np.load("Xinit.np... | HajimeKawaharaREPO_NAMEsotPATH_START.@sot_extracted@sot-master@src@sot@nmfmap@mrsa.py@.PATH_END.py |
{
"filename": "_ticklen.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/scattermap/marker/colorbar/_ticklen.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class TicklenValidator(_plotly_utils.basevalidators.NumberValidator):
def __init__(
self, plotly_name="ticklen", parent_name="scattermap.marker.colorbar", **kwargs
):
super(TicklenValidator, self).__init__(
plotly_name=plotly_name,
pa... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@scattermap@marker@colorbar@_ticklen.py@.PATH_END.py |
{
"filename": "_volume.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/graph_objs/layout/template/data/_volume.py",
"type": "Python"
} | from plotly.graph_objs import Volume
| plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@graph_objs@layout@template@data@_volume.py@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "spacetelescope/jwst",
"repo_path": "jwst_extracted/jwst-main/jwst/assign_mtwcs/tests/data/__init__.py",
"type": "Python"
} | spacetelescopeREPO_NAMEjwstPATH_START.@jwst_extracted@jwst-main@jwst@assign_mtwcs@tests@data@__init__.py@.PATH_END.py | |
{
"filename": "schema.py",
"repo_name": "langchain-ai/langchain",
"repo_path": "langchain_extracted/langchain-master/libs/langchain/langchain/agents/schema.py",
"type": "Python"
} | from typing import Any, Dict, List, Tuple
from langchain_core.agents import AgentAction
from langchain_core.prompts.chat import ChatPromptTemplate
class AgentScratchPadChatPromptTemplate(ChatPromptTemplate):
"""Chat prompt template for the agent scratchpad."""
@classmethod
def is_lc_serializable(cls) ->... | langchain-aiREPO_NAMElangchainPATH_START.@langchain_extracted@langchain-master@libs@langchain@langchain@agents@schema.py@.PATH_END.py |
{
"filename": "README.md",
"repo_name": "tensorflow/tensorflow",
"repo_path": "tensorflow_extracted/tensorflow-master/tensorflow/distribute/experimental/rpc/README.md",
"type": "Markdown"
} | ## Experimental TensorFlow RPC Ops.
This directory contains kernels for RPC Ops in TensorFlow distribute package.
Note*: These ops may move to a separate repository in the future.
| tensorflowREPO_NAMEtensorflowPATH_START.@tensorflow_extracted@tensorflow-master@tensorflow@distribute@experimental@rpc@README.md@.PATH_END.py |
{
"filename": "__init__.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py2/plotly/validators/scattergl/marker/colorbar/tickformatstop/__init__.py",
"type": "Python"
} | import sys
if sys.version_info < (3, 7):
from ._value import ValueValidator
from ._templateitemname import TemplateitemnameValidator
from ._name import NameValidator
from ._enabled import EnabledValidator
from ._dtickrange import DtickrangeValidator
else:
from _plotly_utils.importers import rel... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py2@plotly@validators@scattergl@marker@colorbar@tickformatstop@__init__.py@.PATH_END.py |
{
"filename": "scanner_gui_run.ipynb",
"repo_name": "Skuggsja-Lab/skuggsja-scan",
"repo_path": "skuggsja-scan_extracted/skuggsja-scan-main/scanner_gui_run.ipynb",
"type": "Jupyter Notebook"
} | # Monitoring while scanning
## Imports
```python
from robodk.robolink import * # API to communicate with RoboDK
from robodk.robomath import * # basic matrix operations
import numpy as np
from datetime import datetime
import os
```
## Raster
```python
runfile("scan_control_gui.py")
```
An exception has occ... | Skuggsja-LabREPO_NAMEskuggsja-scanPATH_START.@skuggsja-scan_extracted@skuggsja-scan-main@scanner_gui_run.ipynb@.PATH_END.py |
{
"filename": "README.md",
"repo_name": "mslonina/Mechanic",
"repo_path": "Mechanic_extracted/Mechanic-master/README.md",
"type": "Markdown"
} | Mechanic
--------
### Overview
We develop the Mechanic package, which is a flexible numerical framework to
handle and automate massive numerical simulations. We assume that these computations rely
on testing a huge range of initial conditions, while each test (single simulation run) may
be computed as a standalone ta... | msloninaREPO_NAMEMechanicPATH_START.@Mechanic_extracted@Mechanic-master@README.md@.PATH_END.py |
{
"filename": "diagnostics.py",
"repo_name": "danielrd6/ifscube",
"repo_path": "ifscube_extracted/ifscube-master/ifscube/diagnostics.py",
"type": "Python"
} | import numpy as np
from numpy import ma
import matplotlib.pyplot as plt
from matplotlib import transforms
class bpt:
"""
See Baldwin, Philips & Terlevich 198?,
Kauffmann et al. 2003
"""
def __init__(self, ha, n2, hb, o3):
for line in ('ha', 'n2', 'hb', 'o3'):
if not isins... | danielrd6REPO_NAMEifscubePATH_START.@ifscube_extracted@ifscube-master@ifscube@diagnostics.py@.PATH_END.py |
{
"filename": "attention.py",
"repo_name": "jax-ml/jax",
"repo_path": "jax_extracted/jax-main/jax/experimental/pallas/ops/gpu/attention.py",
"type": "Python"
} | # Copyright 2023 The JAX Authors.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# https://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in wri... | jax-mlREPO_NAMEjaxPATH_START.@jax_extracted@jax-main@jax@experimental@pallas@ops@gpu@attention.py@.PATH_END.py |
{
"filename": "hub_callback_container.py",
"repo_name": "glue-viz/glue",
"repo_path": "glue_extracted/glue-main/glue/core/hub_callback_container.py",
"type": "Python"
} | import weakref
from functools import partial
__all__ = ['HubCallbackContainer']
class HubCallbackContainer(object):
"""
A list-like container for callback functions. We need to be careful with
storing references to methods, because if a callback method is on a class
which contains both the callback a... | glue-vizREPO_NAMEgluePATH_START.@glue_extracted@glue-main@glue@core@hub_callback_container.py@.PATH_END.py |
{
"filename": "v1_schema.py",
"repo_name": "PrefectHQ/prefect",
"repo_path": "prefect_extracted/prefect-main/src/prefect/_internal/pydantic/v1_schema.py",
"type": "Python"
} | import inspect
import typing
import warnings
import pydantic
from pydantic.v1 import BaseModel as V1BaseModel
def is_v1_model(v: typing.Any) -> bool:
with warnings.catch_warnings():
warnings.filterwarnings(
"ignore", category=pydantic.warnings.PydanticDeprecatedSince20
)
if i... | PrefectHQREPO_NAMEprefectPATH_START.@prefect_extracted@prefect-main@src@prefect@_internal@pydantic@v1_schema.py@.PATH_END.py |
{
"filename": "_color.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/layout/scene/xaxis/tickfont/_color.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class ColorValidator(_plotly_utils.basevalidators.ColorValidator):
def __init__(
self, plotly_name="color", parent_name="layout.scene.xaxis.tickfont", **kwargs
):
super(ColorValidator, self).__init__(
plotly_name=plotly_name,
parent_n... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@layout@scene@xaxis@tickfont@_color.py@.PATH_END.py |
{
"filename": "_visible.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/layout/updatemenu/_visible.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class VisibleValidator(_plotly_utils.basevalidators.BooleanValidator):
def __init__(
self, plotly_name="visible", parent_name="layout.updatemenu", **kwargs
):
super(VisibleValidator, self).__init__(
plotly_name=plotly_name,
parent_nam... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@layout@updatemenu@_visible.py@.PATH_END.py |
{
"filename": "SConscript.py",
"repo_name": "rat-pac/rat-pac",
"repo_path": "rat-pac_extracted/rat-pac-master/python/SCons/Script/SConscript.py",
"type": "Python"
} | """SCons.Script.SConscript
This module defines the Python API provided to SConscript and SConstruct
files.
"""
#
# Copyright (c) 2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009 The SCons Foundation
#
# Permission is hereby granted, free of charge, to any person obtaining
# a copy of this software and associated... | rat-pacREPO_NAMErat-pacPATH_START.@rat-pac_extracted@rat-pac-master@python@SCons@Script@SConscript.py@.PATH_END.py |
{
"filename": "p_tuning.md",
"repo_name": "huggingface/peft",
"repo_path": "peft_extracted/peft-main/docs/source/package_reference/p_tuning.md",
"type": "Markdown"
} | <!--Copyright 2023 The HuggingFace Team. All rights reserved.
Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with
the License. You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or agreed... | huggingfaceREPO_NAMEpeftPATH_START.@peft_extracted@peft-main@docs@source@package_reference@p_tuning.md@.PATH_END.py |
{
"filename": "_lightposition.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/isosurface/_lightposition.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class LightpositionValidator(_plotly_utils.basevalidators.CompoundValidator):
def __init__(self, plotly_name="lightposition", parent_name="isosurface", **kwargs):
super(LightpositionValidator, self).__init__(
plotly_name=plotly_name,
parent_name=... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@isosurface@_lightposition.py@.PATH_END.py |
{
"filename": "README.md",
"repo_name": "PrincetonUniversity/athena",
"repo_path": "athena_extracted/athena-master/README.md",
"type": "Markdown"
} | athena
======
<!-- Jenkins Status Badge in Markdown (with view), unprotected, flat style -->
<!-- In general, need to be on Princeton VPN, logged into Princeton CAS, with ViewStatus access to Jenkins instance to click on unprotected Build Status Badge, but server is configured to whitelist GitHub -->
<!-- [![Jenkins Bu... | PrincetonUniversityREPO_NAMEathenaPATH_START.@athena_extracted@athena-master@README.md@.PATH_END.py |
{
"filename": "test_coordinate_helpers.py",
"repo_name": "astropy/astropy",
"repo_path": "astropy_extracted/astropy-main/astropy/visualization/wcsaxes/tests/test_coordinate_helpers.py",
"type": "Python"
} | # Licensed under a 3-clause BSD style license - see LICENSE.rst
from unittest.mock import patch
import matplotlib.pyplot as plt
import matplotlib.transforms as transforms
import pytest
from astropy import units as u
from astropy.io import fits
from astropy.utils.data import get_pkg_data_filename
from astropy.utils.e... | astropyREPO_NAMEastropyPATH_START.@astropy_extracted@astropy-main@astropy@visualization@wcsaxes@tests@test_coordinate_helpers.py@.PATH_END.py |
{
"filename": "conftest.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/parso/py3/tests/conftest.py",
"type": "Python"
} | import re
import tempfile
import shutil
import logging
import os
from pathlib import Path
import pytest
import yatest.common
import parso
from parso import cache
from parso.utils import parse_version_string
collect_ignore = ["setup.py"]
_SUPPORTED_VERSIONS = '3.6', '3.7', '3.8', '3.9', '3.10'
@pytest.fixture(scop... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@parso@py3@tests@conftest.py@.PATH_END.py |
{
"filename": "_bordercolor.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py2/plotly/validators/cone/colorbar/_bordercolor.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class BordercolorValidator(_plotly_utils.basevalidators.ColorValidator):
def __init__(
self, plotly_name="bordercolor", parent_name="cone.colorbar", **kwargs
):
super(BordercolorValidator, self).__init__(
plotly_name=plotly_name,
pare... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py2@plotly@validators@cone@colorbar@_bordercolor.py@.PATH_END.py |
{
"filename": "plot_plummer.py",
"repo_name": "amusecode/amuse",
"repo_path": "amuse_extracted/amuse-main/examples/textbook/plot_plummer.py",
"type": "Python"
} | """
Example AMUSE script to generate a Plummer sphere and plot the results.
"""
###BOOKLISTSTART###
from matplotlib.pyplot import show, xlim, ylim, figure
from amuse.plot import scatter, xlabel, ylabel
from amuse.lab import new_plummer_model
def main(N=10):
figure(figsize=(5,5))
bodies = new_plummer_mode... | amusecodeREPO_NAMEamusePATH_START.@amuse_extracted@amuse-main@examples@textbook@plot_plummer.py@.PATH_END.py |
{
"filename": "lexer.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/Jinja2/py2/jinja2/lexer.py",
"type": "Python"
} | # -*- coding: utf-8 -*-
"""Implements a Jinja / Python combination lexer. The ``Lexer`` class
is used to do some preprocessing. It filters out invalid operators like
the bitshift operators we don't allow in templates. It separates
template code and python code in expressions.
"""
import re
from ast import literal_eval
... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@Jinja2@py2@jinja2@lexer.py@.PATH_END.py |
{
"filename": "test_ontotext_graphdb_graph.py",
"repo_name": "langchain-ai/langchain",
"repo_path": "langchain_extracted/langchain-master/libs/community/tests/integration_tests/graphs/test_ontotext_graphdb_graph.py",
"type": "Python"
} | from pathlib import Path
import pytest
from langchain_community.graphs import OntotextGraphDBGraph
"""
cd libs/community/tests/integration_tests/graphs/docker-compose-ontotext-graphdb
./start.sh
"""
def test_query_method_with_valid_query() -> None:
graph = OntotextGraphDBGraph(
query_endpoint="http://l... | langchain-aiREPO_NAMElangchainPATH_START.@langchain_extracted@langchain-master@libs@community@tests@integration_tests@graphs@test_ontotext_graphdb_graph.py@.PATH_END.py |
{
"filename": "_showticksuffix.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/densitymapbox/colorbar/_showticksuffix.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class ShowticksuffixValidator(_plotly_utils.basevalidators.EnumeratedValidator):
def __init__(
self,
plotly_name="showticksuffix",
parent_name="densitymapbox.colorbar",
**kwargs,
):
super(ShowticksuffixValidator, self).__init__(
... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@densitymapbox@colorbar@_showticksuffix.py@.PATH_END.py |
{
"filename": "make_auto_diff_type.py",
"repo_name": "adamjermyn/Skye",
"repo_path": "Skye_extracted/Skye-main/auto_diff/python/make_auto_diff_type.py",
"type": "Python"
} | version https://git-lfs.github.com/spec/v1
oid sha256:0f0334fdaee7bd5a79e4a835c33ec43fdbbe46010c4eab785e151bfbdad1473d
size 6354
| adamjermynREPO_NAMESkyePATH_START.@Skye_extracted@Skye-main@auto_diff@python@make_auto_diff_type.py@.PATH_END.py |
{
"filename": "_lineposition.py",
"repo_name": "plotly/plotly.py",
"repo_path": "plotly.py_extracted/plotly.py-master/packages/python/plotly/plotly/validators/indicator/number/font/_lineposition.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class LinepositionValidator(_plotly_utils.basevalidators.FlaglistValidator):
def __init__(
self, plotly_name="lineposition", parent_name="indicator.number.font", **kwargs
):
super(LinepositionValidator, self).__init__(
plotly_name=plotly_name,
... | plotlyREPO_NAMEplotly.pyPATH_START.@plotly.py_extracted@plotly.py-master@packages@python@plotly@plotly@validators@indicator@number@font@_lineposition.py@.PATH_END.py |
{
"filename": "_shadow.py",
"repo_name": "catboost/catboost",
"repo_path": "catboost_extracted/catboost-master/contrib/python/plotly/py3/plotly/validators/contour/colorbar/title/font/_shadow.py",
"type": "Python"
} | import _plotly_utils.basevalidators
class ShadowValidator(_plotly_utils.basevalidators.StringValidator):
def __init__(
self, plotly_name="shadow", parent_name="contour.colorbar.title.font", **kwargs
):
super(ShadowValidator, self).__init__(
plotly_name=plotly_name,
pare... | catboostREPO_NAMEcatboostPATH_START.@catboost_extracted@catboost-master@contrib@python@plotly@py3@plotly@validators@contour@colorbar@title@font@_shadow.py@.PATH_END.py |
{
"filename": "_structures.py",
"repo_name": "davidharvey1986/pyRRG",
"repo_path": "pyRRG_extracted/pyRRG-master/unittests/bugFixPyRRG/lib/python3.7/site-packages/pip/_vendor/packaging/_structures.py",
"type": "Python"
} | # This file is dual licensed under the terms of the Apache License, Version
# 2.0, and the BSD License. See the LICENSE file in the root of this repository
# for complete details.
from __future__ import absolute_import, division, print_function
class InfinityType(object):
def __repr__(self):
# type: () ->... | davidharvey1986REPO_NAMEpyRRGPATH_START.@pyRRG_extracted@pyRRG-master@unittests@bugFixPyRRG@lib@python3.7@site-packages@pip@_vendor@packaging@_structures.py@.PATH_END.py |
{
"filename": "palette_choices.py",
"repo_name": "mwaskom/seaborn",
"repo_path": "seaborn_extracted/seaborn-master/examples/palette_choices.py",
"type": "Python"
} | """
Color palette choices
=====================
"""
import numpy as np
import seaborn as sns
import matplotlib.pyplot as plt
sns.set_theme(style="white", context="talk")
rs = np.random.RandomState(8)
# Set up the matplotlib figure
f, (ax1, ax2, ax3) = plt.subplots(3, 1, figsize=(7, 5), sharex=True)
# Generate some s... | mwaskomREPO_NAMEseabornPATH_START.@seaborn_extracted@seaborn-master@examples@palette_choices.py@.PATH_END.py |
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