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square/rack-servlet | core/src/main/java/com/squareup/rack/jruby/JRubyRackApplication.java | JRubyRackApplication.call | @Override public RackResponse call(RackEnvironment environment) {
RubyHash environmentHash = convertToRubyHash(environment.entrySet());
RubyArray response = callRackApplication(environmentHash);
return convertToJavaRackResponse(response);
} | java | @Override public RackResponse call(RackEnvironment environment) {
RubyHash environmentHash = convertToRubyHash(environment.entrySet());
RubyArray response = callRackApplication(environmentHash);
return convertToJavaRackResponse(response);
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/request/impl/DefaultVOMSACService.java | DefaultVOMSACService.getACFromResponse | protected AttributeCertificate getACFromResponse(VOMSACRequest request,
VOMSResponse response) {
byte[] acBytes = response.getAC();
if (acBytes == null)
return null;
ASN1InputStream asn1InputStream = new ASN1InputStream(acBytes);
AttributeCertificate attributeCertificate = null;
try {
attributeCertificate = AttributeCertificate.getInstance(asn1InputStream
.readObject());
asn1InputStream.close();
return attributeCertificate;
} catch (Throwable e) {
requestListener.notifyVOMSRequestFailure(request, null, new VOMSError(
"Error unmarshalling VOMS AC. Cause: " + e.getMessage(), e));
return null;
}
} | java | protected AttributeCertificate getACFromResponse(VOMSACRequest request,
VOMSResponse response) {
byte[] acBytes = response.getAC();
if (acBytes == null)
return null;
ASN1InputStream asn1InputStream = new ASN1InputStream(acBytes);
AttributeCertificate attributeCertificate = null;
try {
attributeCertificate = AttributeCertificate.getInstance(asn1InputStream
.readObject());
asn1InputStream.close();
return attributeCertificate;
} catch (Throwable e) {
requestListener.notifyVOMSRequestFailure(request, null, new VOMSError(
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return null;
}
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/request/impl/DefaultVOMSACService.java | DefaultVOMSACService.handleErrorsInResponse | protected void handleErrorsInResponse(VOMSACRequest request,
VOMSServerInfo si, VOMSResponse response) {
if (response.hasErrors())
requestListener.notifyErrorsInVOMSReponse(request, si,
response.errorMessages());
} | java | protected void handleErrorsInResponse(VOMSACRequest request,
VOMSServerInfo si, VOMSResponse response) {
if (response.hasErrors())
requestListener.notifyErrorsInVOMSReponse(request, si,
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/request/impl/DefaultVOMSACService.java | DefaultVOMSACService.handleWarningsInResponse | protected void handleWarningsInResponse(VOMSACRequest request,
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if (response.hasWarnings())
requestListener.notifyWarningsInVOMSResponse(request, si,
response.warningMessages());
} | java | protected void handleWarningsInResponse(VOMSACRequest request,
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if (response.hasWarnings())
requestListener.notifyWarningsInVOMSResponse(request, si,
response.warningMessages());
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hageldave/ImagingKit | ImagingKit_Core/src/main/java/hageldave/imagingkit/core/util/ImagePanel.java | ImagePanel.drawCheckerBoard | protected void drawCheckerBoard(Graphics2D g2d) {
g2d.setColor(getBackground());
g2d.fillRect(0, 0, getWidth(), getHeight());
g2d.setColor(getForeground());
final int checkSize = this.checkerSize;
final int halfCheckSize = checkSize/2;
final Stroke checker = this.checkerStroke;
final Stroke backup = g2d.getStroke();
g2d.setStroke(checker);
final int width = this.getWidth()+checkSize;
final int height = this.getHeight()+checkSize;
for(int i = halfCheckSize; i < height; i+=checkSize*2){
g2d.drawLine(halfCheckSize, i, width, i);
g2d.drawLine(checkSize+halfCheckSize, i+checkSize, width, i+checkSize);
}
g2d.setStroke(backup);
} | java | protected void drawCheckerBoard(Graphics2D g2d) {
g2d.setColor(getBackground());
g2d.fillRect(0, 0, getWidth(), getHeight());
g2d.setColor(getForeground());
final int checkSize = this.checkerSize;
final int halfCheckSize = checkSize/2;
final Stroke checker = this.checkerStroke;
final Stroke backup = g2d.getStroke();
g2d.setStroke(checker);
final int width = this.getWidth()+checkSize;
final int height = this.getHeight()+checkSize;
for(int i = halfCheckSize; i < height; i+=checkSize*2){
g2d.drawLine(halfCheckSize, i, width, i);
g2d.drawLine(checkSize+halfCheckSize, i+checkSize, width, i+checkSize);
}
g2d.setStroke(backup);
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/web/rest/RSEndpoint.java | RSEndpoint.getMessageToClient | @POST
@Produces(MediaType.APPLICATION_JSON)
@Consumes(MediaType.APPLICATION_FORM_URLENCODED)
@Override
public String getMessageToClient(@FormParam(Constants.Message.MFC) String json) {
HttpSession httpSession = getHttpSession();
setContext(httpSession);
MessageFromClient message = MessageFromClient.createFromJson(json);
MessageToClient mtc = getMessageToClientService().createMessageToClient(message, httpSession);
return mtc.toJson();
} | java | @POST
@Produces(MediaType.APPLICATION_JSON)
@Consumes(MediaType.APPLICATION_FORM_URLENCODED)
@Override
public String getMessageToClient(@FormParam(Constants.Message.MFC) String json) {
HttpSession httpSession = getHttpSession();
setContext(httpSession);
MessageFromClient message = MessageFromClient.createFromJson(json);
MessageToClient mtc = getMessageToClientService().createMessageToClient(message, httpSession);
return mtc.toJson();
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/OcelotServices.java | OcelotServices.setLocale | @JsCacheRemove(cls = OcelotServices.class, methodName = "getLocale", keys = {}, userScope = true)
public void setLocale(@JsonUnmarshaller(LocaleMarshaller.class) Locale locale) {
logger.debug("Receive setLocale call from client. {}", locale);
ocelotContext.setLocale(locale);
} | java | @JsCacheRemove(cls = OcelotServices.class, methodName = "getLocale", keys = {}, userScope = true)
public void setLocale(@JsonUnmarshaller(LocaleMarshaller.class) Locale locale) {
logger.debug("Receive setLocale call from client. {}", locale);
ocelotContext.setLocale(locale);
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/OcelotServices.java | OcelotServices.getLocale | @JsCacheResult(year = 1)
@JsonMarshaller(LocaleMarshaller.class)
public Locale getLocale() {
logger.debug("Receive getLocale call from client.");
return ocelotContext.getLocale();
} | java | @JsCacheResult(year = 1)
@JsonMarshaller(LocaleMarshaller.class)
public Locale getLocale() {
logger.debug("Receive getLocale call from client.");
return ocelotContext.getLocale();
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/OcelotServices.java | OcelotServices.getOutDatedCache | public Collection<String> getOutDatedCache(Map<String, Long> states) {
return updatedCacheManager.getOutDatedCache(states);
} | java | public Collection<String> getOutDatedCache(Map<String, Long> states) {
return updatedCacheManager.getOutDatedCache(states);
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/OcelotServices.java | OcelotServices.subscribe | @JsTopic
@WsDataService
public Integer subscribe(@JsTopicName(prefix = Constants.Topic.SUBSCRIBERS) String topic, Session session) throws IllegalAccessException {
return topicManager.registerTopicSession(topic, session);
} | java | @JsTopic
@WsDataService
public Integer subscribe(@JsTopicName(prefix = Constants.Topic.SUBSCRIBERS) String topic, Session session) throws IllegalAccessException {
return topicManager.registerTopicSession(topic, session);
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/OcelotServices.java | OcelotServices.unsubscribe | @JsTopic
@WsDataService
public Integer unsubscribe(@JsTopicName(prefix = Constants.Topic.SUBSCRIBERS) String topic, Session session) {
return topicManager.unregisterTopicSession(topic, session);
} | java | @JsTopic
@WsDataService
public Integer unsubscribe(@JsTopicName(prefix = Constants.Topic.SUBSCRIBERS) String topic, Session session) {
return topicManager.unregisterTopicSession(topic, session);
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/messageControl/MessageControllerManager.java | MessageControllerManager.getJsTopicMessageController | public JsTopicMessageController getJsTopicMessageController(String topic) {
logger.debug("Looking for messageController for topic '{}'", topic);
JsTopicMessageController messageController = messageControllerCache.loadFromCache(topic);
if(null == messageController) { // not in cache
messageController = getJsTopicMessageControllerFromJsTopicControl(topic); // get from JsTopicControl
if(null == messageController) {
messageController = getJsTopicMessageControllerFromJsTopicControls(topic); // get from JsTopicControls
if(null == messageController) {
messageController = new DefaultJsTopicMessageController();
}
}
messageControllerCache.saveToCache(topic, messageController.getClass()); // save in cache
}
return messageController;
} | java | public JsTopicMessageController getJsTopicMessageController(String topic) {
logger.debug("Looking for messageController for topic '{}'", topic);
JsTopicMessageController messageController = messageControllerCache.loadFromCache(topic);
if(null == messageController) { // not in cache
messageController = getJsTopicMessageControllerFromJsTopicControl(topic); // get from JsTopicControl
if(null == messageController) {
messageController = getJsTopicMessageControllerFromJsTopicControls(topic); // get from JsTopicControls
if(null == messageController) {
messageController = new DefaultJsTopicMessageController();
}
}
messageControllerCache.saveToCache(topic, messageController.getClass()); // save in cache
}
return messageController;
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/messageControl/MessageControllerManager.java | MessageControllerManager.getJsTopicMessageControllerFromJsTopicControl | JsTopicMessageController getJsTopicMessageControllerFromJsTopicControl(String topic) {
logger.debug("Looking for messageController for topic '{}' from JsTopicControl annotation", topic);
Instance<JsTopicMessageController<?>> select = topicMessageController.select(new JsTopicCtrlAnnotationLiteral(topic));
if(!select.isUnsatisfied()) {
logger.debug("Found messageController for topic '{}' from JsTopicControl annotation", topic);
return select.get();
}
return null;
} | java | JsTopicMessageController getJsTopicMessageControllerFromJsTopicControl(String topic) {
logger.debug("Looking for messageController for topic '{}' from JsTopicControl annotation", topic);
Instance<JsTopicMessageController<?>> select = topicMessageController.select(new JsTopicCtrlAnnotationLiteral(topic));
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return select.get();
}
return null;
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicsMessagesBroadcaster.java | TopicsMessagesBroadcaster.sendMessageToTopicForSessions | int sendMessageToTopicForSessions(Collection<Session> sessions, MessageToClient mtc, Object payload) {
int sended = 0;
JsTopicMessageController msgControl = messageControllerManager.getJsTopicMessageController(mtc.getId());
Collection<Session> sessionsClosed = new ArrayList<>();
for (Session session : sessions) {
try {
sended += checkAndSendMtcToSession(session, msgControl, mtc, payload);
} catch (SessionException se) {
sessionsClosed.add(se.getSession());
}
}
if (logger.isDebugEnabled()) {
logger.debug("Send message to '{}' topic {} client(s) : {}", new Object[]{mtc.getId(), sessions.size() - sessionsClosed.size(), mtc});
}
topicManager.removeSessionsToTopic(sessionsClosed);
return sended;
} | java | int sendMessageToTopicForSessions(Collection<Session> sessions, MessageToClient mtc, Object payload) {
int sended = 0;
JsTopicMessageController msgControl = messageControllerManager.getJsTopicMessageController(mtc.getId());
Collection<Session> sessionsClosed = new ArrayList<>();
for (Session session : sessions) {
try {
sended += checkAndSendMtcToSession(session, msgControl, mtc, payload);
} catch (SessionException se) {
sessionsClosed.add(se.getSession());
}
}
if (logger.isDebugEnabled()) {
logger.debug("Send message to '{}' topic {} client(s) : {}", new Object[]{mtc.getId(), sessions.size() - sessionsClosed.size(), mtc});
}
topicManager.removeSessionsToTopic(sessionsClosed);
return sended;
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicsMessagesBroadcaster.java | TopicsMessagesBroadcaster.checkAndSendMtcToSession | int checkAndSendMtcToSession(Session session, JsTopicMessageController msgControl, MessageToClient mtc, Object payload) throws SessionException {
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return 0;
} | java | int checkAndSendMtcToSession(Session session, JsTopicMessageController msgControl, MessageToClient mtc, Object payload) throws SessionException {
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if (session.isOpen()) {
try {
if (null != msgControl) {
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} catch (NotRecipientException ex) {
logger.debug("{} is exclude to receive a message in {}", ex.getMessage(), mtc.getId());
}
} else {
throw new SessionException("CLOSED", null, session);
}
}
return 0;
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicsMessagesBroadcaster.java | TopicsMessagesBroadcaster.checkMessageTopic | void checkMessageTopic(UserContext ctx, String topic, Object payload, JsTopicMessageController msgControl) throws NotRecipientException {
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msgControl.checkRight(ctx, topic, payload);
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} | java | void checkMessageTopic(UserContext ctx, String topic, Object payload, JsTopicMessageController msgControl) throws NotRecipientException {
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osiam/connector4java | src/main/java/org/osiam/client/OsiamConnector.java | OsiamConnector.getMe | public User getMe(AccessToken accessToken, String... attributes) {
return getUserService().getMe(accessToken, attributes);
} | java | public User getMe(AccessToken accessToken, String... attributes) {
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osiam/connector4java | src/main/java/org/osiam/client/OsiamConnector.java | OsiamConnector.refreshAccessToken | public AccessToken refreshAccessToken(AccessToken accessToken, Scope... scopes) {
return getAuthService().refreshAccessToken(accessToken, scopes);
} | java | public AccessToken refreshAccessToken(AccessToken accessToken, Scope... scopes) {
return getAuthService().refreshAccessToken(accessToken, scopes);
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osiam/connector4java | src/main/java/org/osiam/client/OsiamConnector.java | OsiamConnector.updateUser | @Deprecated
public User updateUser(String id, UpdateUser updateUser, AccessToken accessToken) {
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} | java | @Deprecated
public User updateUser(String id, UpdateUser updateUser, AccessToken accessToken) {
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osiam/connector4java | src/main/java/org/osiam/client/OsiamConnector.java | OsiamConnector.updateGroup | @Deprecated
public Group updateGroup(String id, UpdateGroup updateGroup, AccessToken accessToken) {
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} | java | @Deprecated
public Group updateGroup(String id, UpdateGroup updateGroup, AccessToken accessToken) {
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osiam/connector4java | src/main/java/org/osiam/client/OsiamConnector.java | OsiamConnector.getClient | public Client getClient(String clientId, AccessToken accessToken) {
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} | java | public Client getClient(String clientId, AccessToken accessToken) {
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osiam/connector4java | src/main/java/org/osiam/client/OsiamConnector.java | OsiamConnector.createClient | public Client createClient(Client client, AccessToken accessToken) {
return getAuthService().createClient(client, accessToken);
} | java | public Client createClient(Client client, AccessToken accessToken) {
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osiam/connector4java | src/main/java/org/osiam/client/OsiamConnector.java | OsiamConnector.updateClient | public Client updateClient(String clientId, Client client, AccessToken accessToken) {
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} | java | public Client updateClient(String clientId, Client client, AccessToken accessToken) {
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dkpro/dkpro-statistics | dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/visualization/ContingencyMatrixPrinter.java | ContingencyMatrixPrinter.print | public void print(final PrintStream out, final ICodingAnnotationStudy study) {
if (study.getRaterCount() > 2)
throw new IllegalArgumentException("Contingency tables are only applicable for two rater studies.");
//TODO: measure length of cats. maybe cut them.
Map<Object, Integer> categories = new LinkedHashMap<Object, Integer>();
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int cat2 = categories.get(item.getUnit(1).getCategory());
frequencies[cat1][cat2]++;
}
final String DIVIDER = "\t";
for (Object category : categories.keySet())
out.print(DIVIDER + category);
out.print(DIVIDER + "Σ");
out.println();
int i = 0;
int[] colSum = new int[study.getCategoryCount()];
for (Object category1 : categories.keySet()) {
out.print(category1);
int rowSum = 0;
for (int j = 0; j < categories.size(); j++) {
out.printf(DIVIDER + "%3d", frequencies[i][j]);
rowSum += frequencies[i][j];
colSum[j] += frequencies[i][j];
}
out.printf(DIVIDER + "%3d", rowSum);
out.println();
i++;
}
out.print("Σ");
int rowSum = 0;
for (int j = 0; j < categories.size(); j++) {
out.printf(DIVIDER + "%3d", colSum[j]);
rowSum += colSum[j];
}
out.printf(DIVIDER + "%3d", rowSum);
out.println();
} | java | public void print(final PrintStream out, final ICodingAnnotationStudy study) {
if (study.getRaterCount() > 2)
throw new IllegalArgumentException("Contingency tables are only applicable for two rater studies.");
//TODO: measure length of cats. maybe cut them.
Map<Object, Integer> categories = new LinkedHashMap<Object, Integer>();
for (Object cat : study.getCategories())
categories.put(cat, categories.size());
int[][] frequencies = new int[study.getCategoryCount()][study.getCategoryCount()];
for (ICodingAnnotationItem item : study.getItems()) {
int cat1 = categories.get(item.getUnit(0).getCategory());
int cat2 = categories.get(item.getUnit(1).getCategory());
frequencies[cat1][cat2]++;
}
final String DIVIDER = "\t";
for (Object category : categories.keySet())
out.print(DIVIDER + category);
out.print(DIVIDER + "Σ");
out.println();
int i = 0;
int[] colSum = new int[study.getCategoryCount()];
for (Object category1 : categories.keySet()) {
out.print(category1);
int rowSum = 0;
for (int j = 0; j < categories.size(); j++) {
out.printf(DIVIDER + "%3d", frequencies[i][j]);
rowSum += frequencies[i][j];
colSum[j] += frequencies[i][j];
}
out.printf(DIVIDER + "%3d", rowSum);
out.println();
i++;
}
out.print("Σ");
int rowSum = 0;
for (int j = 0; j < categories.size(); j++) {
out.printf(DIVIDER + "%3d", colSum[j]);
rowSum += colSum[j];
}
out.printf(DIVIDER + "%3d", rowSum);
out.println();
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/util/VOMSFQANNamingScheme.java | VOMSFQANNamingScheme.checkSyntax | public static void checkSyntax(String fqan) {
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} | java | public static void checkSyntax(String fqan) {
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throw new VOMSError("fqan.length() > 255");
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/util/VOMSFQANNamingScheme.java | VOMSFQANNamingScheme.checkRole | public static void checkRole(String roleName) {
if (roleName.length() > 255)
throw new VOMSError("roleName.length()>255");
if (!rolePattern.matcher(roleName).matches())
throw new VOMSError("Syntax error in role name: " + roleName);
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if (roleName.length() > 255)
throw new VOMSError("roleName.length()>255");
if (!rolePattern.matcher(roleName).matches())
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@param roleName
the name of the role
@throws VOMSError
If the string passed as argument doens not comply with the voms
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/util/VOMSFQANNamingScheme.java | VOMSFQANNamingScheme.getRoleName | public static String getRoleName(String containerName) {
if (!isRole(containerName) && !isQualifiedRole(containerName))
throw new VOMSError("No role specified in \"" + containerName
+ "\" voms syntax.");
Matcher m = fqanPattern.matcher(containerName);
if (m.matches()) {
String roleGroup = m.group(4);
return roleGroup
.substring(roleGroup.indexOf('=') + 1, roleGroup.length());
}
return null;
} | java | public static String getRoleName(String containerName) {
if (!isRole(containerName) && !isQualifiedRole(containerName))
throw new VOMSError("No role specified in \"" + containerName
+ "\" voms syntax.");
Matcher m = fqanPattern.matcher(containerName);
if (m.matches()) {
String roleGroup = m.group(4);
return roleGroup
.substring(roleGroup.indexOf('=') + 1, roleGroup.length());
}
return null;
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/util/VOMSFQANNamingScheme.java | VOMSFQANNamingScheme.getGroupName | public static String getGroupName(String containerName) {
checkSyntax(containerName);
// If it's a container and it's not a role or a qualified role, then
// it's a group!
if (!isRole(containerName) && !isQualifiedRole(containerName))
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String groupName = m.group(2);
if (groupName.endsWith("/"))
return groupName.substring(0, groupName.length() - 1);
else
return groupName;
}
return null;
} | java | public static String getGroupName(String containerName) {
checkSyntax(containerName);
// If it's a container and it's not a role or a qualified role, then
// it's a group!
if (!isRole(containerName) && !isQualifiedRole(containerName))
return containerName;
Matcher m = fqanPattern.matcher(containerName);
if (m.matches()) {
String groupName = m.group(2);
if (groupName.endsWith("/"))
return groupName.substring(0, groupName.length() - 1);
else
return groupName;
}
return null;
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xqbase/tuna | core/src/main/java/com/xqbase/tuna/ConnectionFilter.java | ConnectionFilter.send | @Override
public void send(byte[] b, int off, int len) {
handler.send(b, off, len);
} | java | @Override
public void send(byte[] b, int off, int len) {
handler.send(b, off, len);
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jenkinsci/gmaven | gmaven-plugin/src/main/java/org/codehaus/gmaven/plugin/MojoSupport.java | MojoSupport.createArtifact | protected Artifact createArtifact(final ArtifactItem item) throws MojoExecutionException {
assert item != null;
if (item.getVersion() == null) {
fillMissingArtifactVersion(item);
if (item.getVersion() == null) {
throw new MojoExecutionException("Unable to find artifact version of " + item.getGroupId()
+ ":" + item.getArtifactId() + " in either dependency list or in project's dependency management.");
}
}
// Convert the string version to a range
VersionRange range;
try {
range = VersionRange.createFromVersionSpec(item.getVersion());
log.trace("Using version range: {}", range);
}
catch (InvalidVersionSpecificationException e) {
throw new MojoExecutionException("Could not create range for version: " + item.getVersion(), e);
}
return artifactFactory.createDependencyArtifact(
item.getGroupId(),
item.getArtifactId(),
range,
item.getType(),
item.getClassifier(),
Artifact.SCOPE_PROVIDED);
} | java | protected Artifact createArtifact(final ArtifactItem item) throws MojoExecutionException {
assert item != null;
if (item.getVersion() == null) {
fillMissingArtifactVersion(item);
if (item.getVersion() == null) {
throw new MojoExecutionException("Unable to find artifact version of " + item.getGroupId()
+ ":" + item.getArtifactId() + " in either dependency list or in project's dependency management.");
}
}
// Convert the string version to a range
VersionRange range;
try {
range = VersionRange.createFromVersionSpec(item.getVersion());
log.trace("Using version range: {}", range);
}
catch (InvalidVersionSpecificationException e) {
throw new MojoExecutionException("Could not create range for version: " + item.getVersion(), e);
}
return artifactFactory.createDependencyArtifact(
item.getGroupId(),
item.getArtifactId(),
range,
item.getType(),
item.getClassifier(),
Artifact.SCOPE_PROVIDED);
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jenkinsci/gmaven | gmaven-plugin/src/main/java/org/codehaus/gmaven/plugin/MojoSupport.java | MojoSupport.fillMissingArtifactVersion | private void fillMissingArtifactVersion(final ArtifactItem item) {
log.trace("Attempting to find missing version in {}:{}", item.getGroupId() , item.getArtifactId());
List list = project.getDependencies();
for (int i = 0; i < list.size(); ++i) {
Dependency dependency = (Dependency) list.get(i);
if (dependency.getGroupId().equals(item.getGroupId())
&& dependency.getArtifactId().equals(item.getArtifactId())
&& dependency.getType().equals(item.getType()))
{
log.trace("Found missing version: {} in dependency list", dependency.getVersion());
item.setVersion(dependency.getVersion());
return;
}
}
list = project.getDependencyManagement().getDependencies();
for (int i = 0; i < list.size(); i++) {
Dependency dependency = (Dependency) list.get(i);
if (dependency.getGroupId().equals(item.getGroupId())
&& dependency.getArtifactId().equals(item.getArtifactId())
&& dependency.getType().equals(item.getType()))
{
log.trace("Found missing version: {} in dependency management list", dependency.getVersion());
item.setVersion(dependency.getVersion());
}
}
} | java | private void fillMissingArtifactVersion(final ArtifactItem item) {
log.trace("Attempting to find missing version in {}:{}", item.getGroupId() , item.getArtifactId());
List list = project.getDependencies();
for (int i = 0; i < list.size(); ++i) {
Dependency dependency = (Dependency) list.get(i);
if (dependency.getGroupId().equals(item.getGroupId())
&& dependency.getArtifactId().equals(item.getArtifactId())
&& dependency.getType().equals(item.getType()))
{
log.trace("Found missing version: {} in dependency list", dependency.getVersion());
item.setVersion(dependency.getVersion());
return;
}
}
list = project.getDependencyManagement().getDependencies();
for (int i = 0; i < list.size(); i++) {
Dependency dependency = (Dependency) list.get(i);
if (dependency.getGroupId().equals(item.getGroupId())
&& dependency.getArtifactId().equals(item.getArtifactId())
&& dependency.getType().equals(item.getType()))
{
log.trace("Found missing version: {} in dependency management list", dependency.getVersion());
item.setVersion(dependency.getVersion());
}
}
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xqbase/tuna | core/src/main/java/com/xqbase/tuna/ConnectionWrapper.java | ConnectionWrapper.onRecv | @Override
public void onRecv(byte[] b, int off, int len) {
connection.onRecv(b, off, len);
} | java | @Override
public void onRecv(byte[] b, int off, int len) {
connection.onRecv(b, off, len);
} | [
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riversun/finbin | src/main/java/org/riversun/finbin/BigBinarySearcher.java | BigBinarySearcher.searchBigBytes | public List<Integer> searchBigBytes(byte[] srcBytes, byte[] searchBytes) {
int numOfThreadsOptimized = (srcBytes.length / analyzeByteArrayUnitSize);
if (numOfThreadsOptimized == 0) {
numOfThreadsOptimized = 1;
}
return searchBigBytes(srcBytes, searchBytes, numOfThreadsOptimized);
} | java | public List<Integer> searchBigBytes(byte[] srcBytes, byte[] searchBytes) {
int numOfThreadsOptimized = (srcBytes.length / analyzeByteArrayUnitSize);
if (numOfThreadsOptimized == 0) {
numOfThreadsOptimized = 1;
}
return searchBigBytes(srcBytes, searchBytes, numOfThreadsOptimized);
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/credential/impl/DefaultLoadCredentialsStrategy.java | DefaultLoadCredentialsStrategy.getFromEnvOrSystemProperty | public String getFromEnvOrSystemProperty(String propName) {
String val = System.getenv(propName);
if (val == null)
val = System.getProperty(propName);
return val;
} | java | public String getFromEnvOrSystemProperty(String propName) {
String val = System.getenv(propName);
if (val == null)
val = System.getProperty(propName);
return val;
} | [
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dkpro/dkpro-statistics | dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/visualization/ReliabilityMatrixPrinter.java | ReliabilityMatrixPrinter.print | public void print(final PrintStream out, final ICodingAnnotationStudy study) {
//TODO: measure length of cats. maybe cut them.
Map<Object, Integer> categories = new LinkedHashMap<Object, Integer>();
for (Object cat : study.getCategories())
categories.put(cat, categories.size());
final String DIVIDER = "\t";
for (int i = 0; i < study.getItemCount(); i++)
out.print(DIVIDER + (i + 1));
out.print(DIVIDER + "Σ");
out.println();
for (int r = 0; r < study.getRaterCount(); r++) {
out.print(r + 1);
for (ICodingAnnotationItem item : study.getItems())
out.print(DIVIDER + item.getUnit(r).getCategory());
out.println();
}
out.println();
for (Object category : study.getCategories()) {
out.print(category);
int catSum = 0;
for (ICodingAnnotationItem item : study.getItems()) {
int catCount = 0;
for (IAnnotationUnit unit : item.getUnits())
if (category.equals(unit.getCategory()))
catCount++;
out.print(DIVIDER + (catCount > 0 ? catCount : ""));
catSum += catCount;
}
out.println(DIVIDER + catSum);
}
/*
for (Object category : categories.keySet())
out.print(DIVIDER + category);
out.print(DIVIDER + "Σ");
out.println();
int i = 0;
int[] colSum = new int[study.getCategoryCount()];
for (Object category1 : categories.keySet()) {
out.print(category1);
int rowSum = 0;
for (int j = 0; j < categories.size(); j++) {
out.printf(DIVIDER + "%3d", frequencies[i][j]);
rowSum += frequencies[i][j];
colSum[j] += frequencies[i][j];
}
out.printf(DIVIDER + "%3d", rowSum);
out.println();
i++;
}
out.print("Σ");
int rowSum = 0;
for (int j = 0; j < categories.size(); j++) {
out.printf(DIVIDER + "%3d", colSum[j]);
rowSum += colSum[j];
}
out.printf(DIVIDER + "%3d", rowSum);
out.println();*/
} | java | public void print(final PrintStream out, final ICodingAnnotationStudy study) {
//TODO: measure length of cats. maybe cut them.
Map<Object, Integer> categories = new LinkedHashMap<Object, Integer>();
for (Object cat : study.getCategories())
categories.put(cat, categories.size());
final String DIVIDER = "\t";
for (int i = 0; i < study.getItemCount(); i++)
out.print(DIVIDER + (i + 1));
out.print(DIVIDER + "Σ");
out.println();
for (int r = 0; r < study.getRaterCount(); r++) {
out.print(r + 1);
for (ICodingAnnotationItem item : study.getItems())
out.print(DIVIDER + item.getUnit(r).getCategory());
out.println();
}
out.println();
for (Object category : study.getCategories()) {
out.print(category);
int catSum = 0;
for (ICodingAnnotationItem item : study.getItems()) {
int catCount = 0;
for (IAnnotationUnit unit : item.getUnits())
if (category.equals(unit.getCategory()))
catCount++;
out.print(DIVIDER + (catCount > 0 ? catCount : ""));
catSum += catCount;
}
out.println(DIVIDER + catSum);
}
/*
for (Object category : categories.keySet())
out.print(DIVIDER + category);
out.print(DIVIDER + "Σ");
out.println();
int i = 0;
int[] colSum = new int[study.getCategoryCount()];
for (Object category1 : categories.keySet()) {
out.print(category1);
int rowSum = 0;
for (int j = 0; j < categories.size(); j++) {
out.printf(DIVIDER + "%3d", frequencies[i][j]);
rowSum += frequencies[i][j];
colSum[j] += frequencies[i][j];
}
out.printf(DIVIDER + "%3d", rowSum);
out.println();
i++;
}
out.print("Σ");
int rowSum = 0;
for (int j = 0; j < categories.size(); j++) {
out.printf(DIVIDER + "%3d", colSum[j]);
rowSum += colSum[j];
}
out.printf(DIVIDER + "%3d", rowSum);
out.println();*/
} | [
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] | 0b0e93dc49223984964411cbc6df420ba796a8cb | https://github.com/dkpro/dkpro-statistics/blob/0b0e93dc49223984964411cbc6df420ba796a8cb/dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/visualization/ReliabilityMatrixPrinter.java#L53-L116 | train |
ocelotds/ocelot | ocelot-processor/src/main/java/org/ocelotds/processors/OcelotProcessor.java | OcelotProcessor.getPackagePath | String getPackagePath(TypeElement te) {
return te.getQualifiedName().toString().replaceAll("." + te.getSimpleName(), "");
} | java | String getPackagePath(TypeElement te) {
return te.getQualifiedName().toString().replaceAll("." + te.getSimpleName(), "");
} | [
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@param te
@return | [
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ocelotds/ocelot | ocelot-processor/src/main/java/org/ocelotds/processors/OcelotProcessor.java | OcelotProcessor.getFilename | String getFilename(TypeElement te, String fwk) {
return getFilename(te.getSimpleName().toString(), fwk);
} | java | String getFilename(TypeElement te, String fwk) {
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ocelotds/ocelot | ocelot-processor/src/main/java/org/ocelotds/processors/OcelotProcessor.java | OcelotProcessor.writeCoreInClassesOutput | void writeCoreInClassesOutput() {
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fws.copyResourceToClassesOutput(resPath, "core.ng.js");
fws.copyResourceToClassesOutput(resPath, "core.min.js");
fws.copyResourceToClassesOutput(resPath, "core.js");
} | java | void writeCoreInClassesOutput() {
String resPath = ProcessorConstants.SEPARATORCHAR + "js";
fws.copyResourceToClassesOutput(resPath, "core.ng.min.js");
fws.copyResourceToClassesOutput(resPath, "core.ng.js");
fws.copyResourceToClassesOutput(resPath, "core.min.js");
fws.copyResourceToClassesOutput(resPath, "core.js");
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/credential/impl/AbstractLoadCredentialsStrategy.java | AbstractLoadCredentialsStrategy.fileExistsAndIsReadable | protected boolean fileExistsAndIsReadable(String filename) {
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/web/ws/WSEndpoint.java | WSEndpoint.getWSController | WSController getWSController() {
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// controller = getCdiBeanResolver().getBean(WSController.class);
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if (null == controller) {
controller = CDI.current().select(WSController.class).get();
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dkpro/dkpro-statistics | dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/coding/CohenKappaAgreement.java | CohenKappaAgreement.calculateExpectedAgreement | @Override
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result = result.add(prod);
}
}
result = result.divide(new BigDecimal(study.getItemCount()).pow(2), MathContext.DECIMAL128);
return result.doubleValue();
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BigDecimal result = BigDecimal.ZERO;
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dkpro/dkpro-statistics | dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/coding/CohenKappaAgreement.java | CohenKappaAgreement.calculateCategoryAgreement | @Override
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double kappaj = (Pj - pj) / (double) (1 - pj);
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/marshalling/ArgumentServices.java | ArgumentServices.getIJsonMarshallerInstance | public IJsonMarshaller getIJsonMarshallerInstance(Class<? extends IJsonMarshaller> cls) throws JsonMarshallerException {
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dkpro/dkpro-statistics | dkpro-statistics-significance/src/main/java/org/dkpro/statistics/significance/Significance.java | Significance.getSignificance | public static double getSignificance(double[] sample1, double[] sample2) throws IllegalArgumentException, MathException {
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boolean significance = TestUtils.pairedTTest(sample1, sample2, .30);
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dkpro/dkpro-statistics | dkpro-statistics-significance/src/main/java/org/dkpro/statistics/significance/Significance.java | Significance.getSignificance | public static double getSignificance(double correlation1, double correlation2, int n1, int n2) throws MathException {
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double zv2 = FisherZTransformation.transform(correlation2);
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// transform to Fisher Z-values
double zv1 = FisherZTransformation.transform(correlation1);
double zv2 = FisherZTransformation.transform(correlation2);
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jenkinsci/gmaven | gmaven-mojo/src/main/java/org/codehaus/gmaven/mojo/GroovyMojo.java | GroovyMojo.getAnt | private AntBuilder getAnt() {
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/core/services/MethodServices.java | MethodServices.getMethodFromDataService | public Method getMethodFromDataService(final Class dsClass, final MessageFromClient message, List<Object> arguments) throws NoSuchMethodException {
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arguments.clear();
}
}
nbparam++;
}
}
throw new NoSuchMethodException(dsClass.getName() + "." + message.getOperation());
} | java | public Method getMethodFromDataService(final Class dsClass, final MessageFromClient message, List<Object> arguments) throws NoSuchMethodException {
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return method;
} catch (JsonMarshallerException | JsonUnmarshallingException | IllegalArgumentException iae) {
logger.debug("Method {}.{} not found. Some arguments didn't match. {}.", new Object[]{dsClass, message.getOperation(), iae.getMessage()});
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/core/services/MethodServices.java | MethodServices.getNonProxiedMethod | public Method getNonProxiedMethod(Class cls, String methodName, Class<?>... parameterTypes) throws NoSuchMethodException {
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/core/services/MethodServices.java | MethodServices.getNumberOfNullEnderParameter | int getNumberOfNullEnderParameter(List<String> parameters) {
int nbnull = 0;
for (int i = parameters.size() - 1; i >= 0; i--) {
String parameter = parameters.get(i);
if (parameter.equals("null")) {
nbnull++;
} else {
break;
}
}
return nbnull;
} | java | int getNumberOfNullEnderParameter(List<String> parameters) {
int nbnull = 0;
for (int i = parameters.size() - 1; i >= 0; i--) {
String parameter = parameters.get(i);
if (parameter.equals("null")) {
nbnull++;
} else {
break;
}
}
return nbnull;
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/core/services/MethodServices.java | MethodServices.checkMethod | void checkMethod(Method method, List<Object> arguments, List<String> parameters, int nbparam) throws IllegalArgumentException, JsonUnmarshallingException, JsonMarshallerException {
Type[] paramTypes = method.getGenericParameterTypes();
Annotation[][] parametersAnnotations = method.getParameterAnnotations();
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} | java | void checkMethod(Method method, List<Object> arguments, List<String> parameters, int nbparam) throws IllegalArgumentException, JsonUnmarshallingException, JsonMarshallerException {
Type[] paramTypes = method.getGenericParameterTypes();
Annotation[][] parametersAnnotations = method.getParameterAnnotations();
int idx = 0;
for (Type paramType : paramTypes) {
logger.debug("Try to convert argument ({}) {} : {}.", new Object[]{idx, paramType, parameters.get(idx)});
arguments.add(argumentConvertor.convertJsonToJava(parameters.get(idx), paramType, parametersAnnotations[idx]));
idx++;
if (idx > nbparam) {
throw new IllegalArgumentException();
}
}
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hageldave/ImagingKit | ImagingKit_Core/src/main/java/hageldave/imagingkit/core/Pixel.java | Pixel.setARGB | public void setARGB(int a, int r, int g, int b){
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hageldave/ImagingKit | ImagingKit_Core/src/main/java/hageldave/imagingkit/core/Pixel.java | Pixel.setRGB | public void setRGB(int r, int g, int b){
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hageldave/ImagingKit | ImagingKit_Core/src/main/java/hageldave/imagingkit/core/Pixel.java | Pixel.setRGB_preserveAlpha | public void setRGB_preserveAlpha(int r, int g, int b){
setValue((getValue() & 0xff000000 ) | Pixel.argb(0, r, g, b));
} | java | public void setRGB_preserveAlpha(int r, int g, int b){
setValue((getValue() & 0xff000000 ) | Pixel.argb(0, r, g, b));
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hageldave/ImagingKit | ImagingKit_Core/src/main/java/hageldave/imagingkit/core/util/BufferedImageFactory.java | BufferedImageFactory.get | public static BufferedImage get(Image img, int imgType){
Function<Integer, ImageObserver> obs = flags->{
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BufferedImage bimg = new BufferedImage(
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Graphics2D gr2D = bimg.createGraphics();
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gr2D.dispose();
return bimg;
} | java | public static BufferedImage get(Image img, int imgType){
Function<Integer, ImageObserver> obs = flags->{
return (image, infoflags, x, y, width, height)->(infoflags & flags)!=flags;
};
BufferedImage bimg = new BufferedImage(
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicManagerImpl.java | TopicManagerImpl.registerTopicSession | @Override
public int registerTopicSession(String topic, Session session) throws IllegalAccessException {
if (isInconsistenceContext(topic, session)) {
return 0;
}
Collection<Session> sessions;
if (map.containsKey(topic)) {
sessions = map.get(topic);
} else {
sessions = Collections.synchronizedCollection(new ArrayList<Session>());
map.put(topic, sessions);
}
topicAccessManager.checkAccessTopic(userContextFactory.getUserContext(session.getId()), topic);
logger.debug("'{}' subscribe to '{}'", session.getId(), topic);
if (session.isOpen()) {
sessions.add(session);
}
return getNumberSubscribers(topic);
} | java | @Override
public int registerTopicSession(String topic, Session session) throws IllegalAccessException {
if (isInconsistenceContext(topic, session)) {
return 0;
}
Collection<Session> sessions;
if (map.containsKey(topic)) {
sessions = map.get(topic);
} else {
sessions = Collections.synchronizedCollection(new ArrayList<Session>());
map.put(topic, sessions);
}
topicAccessManager.checkAccessTopic(userContextFactory.getUserContext(session.getId()), topic);
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sessions.add(session);
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicManagerImpl.java | TopicManagerImpl.unregisterTopicSession | @Override
public int unregisterTopicSession(String topic, Session session) {
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removeSessionToSessions(session, sessions);
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public int unregisterTopicSession(String topic, Session session) {
if (isInconsistenceContext(topic, session)) {
return 0;
}
logger.debug("'{}' unsubscribe to '{}'", session.getId(), topic);
if (Constants.Topic.ALL.equals(topic)) {
for (Map.Entry<String, Collection<Session>> entry : map.entrySet()) {
Collection<Session> sessions = entry.getValue();
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}
}
} else {
Collection<Session> sessions = map.get(topic);
removeSessionToSessions(session, sessions);
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map.remove(topic);
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicManagerImpl.java | TopicManagerImpl.removeSessionToSessions | int removeSessionToSessions(Session session, Collection<Session> sessions) {
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return 0;
} | java | int removeSessionToSessions(Session session, Collection<Session> sessions) {
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicManagerImpl.java | TopicManagerImpl.unregisterTopicSessions | boolean unregisterTopicSessions(String topic, Collection<Session> sessions) {
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boolean unregister = false;
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicManagerImpl.java | TopicManagerImpl.removeSessionsToTopic | @Override
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicManagerImpl.java | TopicManagerImpl.removeSessionToTopics | @Override
public Collection<String> removeSessionToTopics(Session session) {
if (session != null) {
return removeSessionsToTopic(Arrays.asList(session));
// for (String topic : map.keySet()) {
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// }
}
return Collections.EMPTY_LIST;
} | java | @Override
public Collection<String> removeSessionToTopics(Session session) {
if (session != null) {
return removeSessionsToTopic(Arrays.asList(session));
// for (String topic : map.keySet()) {
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}
return Collections.EMPTY_LIST;
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicManagerImpl.java | TopicManagerImpl.sendSubscriptionEvent | void sendSubscriptionEvent(String topic, int nb) {
Collection<Session> sessions = getSessionsForTopic(topic);
if (!sessions.isEmpty()) {
MessageToClient messageToClient = new MessageToClient();
messageToClient.setId(topic);
messageToClient.setType(MessageType.MESSAGE);
messageToClient.setResponse(nb);
// Collection<Session> sessionsClosed = new ArrayList<>(); // throws java.lang.StackOverflowError
for (Session session : sessions) {
if (session.isOpen()) {
session.getAsyncRemote().sendObject(messageToClient);
// } else {
// sessionsClosed.add(session);
}
}
// removeSessionsToTopic(sessionsClosed);
}
} | java | void sendSubscriptionEvent(String topic, int nb) {
Collection<Session> sessions = getSessionsForTopic(topic);
if (!sessions.isEmpty()) {
MessageToClient messageToClient = new MessageToClient();
messageToClient.setId(topic);
messageToClient.setType(MessageType.MESSAGE);
messageToClient.setResponse(nb);
// Collection<Session> sessionsClosed = new ArrayList<>(); // throws java.lang.StackOverflowError
for (Session session : sessions) {
if (session.isOpen()) {
session.getAsyncRemote().sendObject(messageToClient);
// } else {
// sessionsClosed.add(session);
}
}
// removeSessionsToTopic(sessionsClosed);
}
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicManagerImpl.java | TopicManagerImpl.getSessionsForTopic | @Override
public Collection<Session> getSessionsForTopic(String topic) {
Collection<Session> result;
if (map.containsKey(topic)) {
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} else {
result = Collections.EMPTY_LIST;
}
return result;
} | java | @Override
public Collection<Session> getSessionsForTopic(String topic) {
Collection<Session> result;
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} else {
result = Collections.EMPTY_LIST;
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/TopicManagerImpl.java | TopicManagerImpl.getNumberSubscribers | @Override
public int getNumberSubscribers(String topic) {
if (map.containsKey(topic)) {
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}
return 0;
} | java | @Override
public int getNumberSubscribers(String topic) {
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/request/SSLSocketFactoryProvider.java | SSLSocketFactoryProvider.getSSLSockectFactory | public SSLSocketFactory getSSLSockectFactory() {
SSLContext context = null;
try {
context = SSLContext.getInstance("TLS");
} catch (NoSuchAlgorithmException e) {
throw new VOMSError(e.getMessage(), e);
}
KeyManager[] keyManagers = new KeyManager[] { credential.getKeyManager() };
X509TrustManager trustManager = SocketFactoryCreator
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TrustManager[] trustManagers = new TrustManager[] { trustManager };
SecureRandom secureRandom = null;
/* http://bugs.sun.com/view_bug.do?bug_id=6202721 */
/*
* Use new SecureRandom instead of SecureRandom.getInstance("SHA1PRNG") to
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*/
secureRandom = new SecureRandom();
try {
context.init(keyManagers, trustManagers, secureRandom);
} catch (KeyManagementException e) {
throw new VOMSError(e.getMessage(), e);
}
return context.getSocketFactory();
} | java | public SSLSocketFactory getSSLSockectFactory() {
SSLContext context = null;
try {
context = SSLContext.getInstance("TLS");
} catch (NoSuchAlgorithmException e) {
throw new VOMSError(e.getMessage(), e);
}
KeyManager[] keyManagers = new KeyManager[] { credential.getKeyManager() };
X509TrustManager trustManager = SocketFactoryCreator
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TrustManager[] trustManagers = new TrustManager[] { trustManager };
SecureRandom secureRandom = null;
/* http://bugs.sun.com/view_bug.do?bug_id=6202721 */
/*
* Use new SecureRandom instead of SecureRandom.getInstance("SHA1PRNG") to
* avoid unnecessary blocking
*/
secureRandom = new SecureRandom();
try {
context.init(keyManagers, trustManagers, secureRandom);
} catch (KeyManagementException e) {
throw new VOMSError(e.getMessage(), e);
}
return context.getSocketFactory();
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hageldave/ImagingKit | ImagingKit_Fourier/src/main/java/hageldave/imagingkit/fourier/ArrayUtils.java | ArrayUtils.scaleArray | public static void scaleArray(final double[] array, final double factor){
for(int i = 0; i < array.length; i++){
array[i] *= factor;
}
} | java | public static void scaleArray(final double[] array, final double factor){
for(int i = 0; i < array.length; i++){
array[i] *= factor;
}
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dkpro/dkpro-statistics | dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/coding/WeightedKappaAgreement.java | WeightedKappaAgreement.calculateObservedDisagreement | @Override
public double calculateObservedDisagreement() {
ensureDistanceFunction();
double result = 0.0;
double maxDistance = 1.0;
for (ICodingAnnotationItem item : study.getItems()) {
Map<Object, Integer> annotationsPerCategory
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for (Entry<Object, Integer> category1 : annotationsPerCategory.entrySet())
for (Entry<Object, Integer> category2 : annotationsPerCategory.entrySet()) {
if (category1.getValue() == null)
continue;
if (category2.getValue() == null)
continue;
double distance = distanceFunction.measureDistance(study,
category1.getKey(), category2.getKey());
result += category1.getValue() * category2.getValue()
* distance;
if (distance > maxDistance)
maxDistance = distance;
}
}
result /= (double) (maxDistance * study.getItemCount() * study.getRaterCount()
* (study.getRaterCount() - 1));
return result;
} | java | @Override
public double calculateObservedDisagreement() {
ensureDistanceFunction();
double result = 0.0;
double maxDistance = 1.0;
for (ICodingAnnotationItem item : study.getItems()) {
Map<Object, Integer> annotationsPerCategory
= CodingAnnotationStudy.countTotalAnnotationsPerCategory(item);
for (Entry<Object, Integer> category1 : annotationsPerCategory.entrySet())
for (Entry<Object, Integer> category2 : annotationsPerCategory.entrySet()) {
if (category1.getValue() == null)
continue;
if (category2.getValue() == null)
continue;
double distance = distanceFunction.measureDistance(study,
category1.getKey(), category2.getKey());
result += category1.getValue() * category2.getValue()
* distance;
if (distance > maxDistance)
maxDistance = distance;
}
}
result /= (double) (maxDistance * study.getItemCount() * study.getRaterCount()
* (study.getRaterCount() - 1));
return result;
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ocelotds/ocelot | ocelot-processor/src/main/java/org/ocelotds/processors/visitors/AbstractDataServiceVisitor.java | AbstractDataServiceVisitor.getJsInstancename | String getJsInstancename(String classname) {
char chars[] = classname.toCharArray();
chars[0] = Character.toLowerCase(chars[0]);
return new String(chars);
//return Introspector.decapitalize(classname);
} | java | String getJsInstancename(String classname) {
char chars[] = classname.toCharArray();
chars[0] = Character.toLowerCase(chars[0]);
return new String(chars);
//return Introspector.decapitalize(classname);
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ocelotds/ocelot | ocelot-processor/src/main/java/org/ocelotds/processors/visitors/AbstractDataServiceVisitor.java | AbstractDataServiceVisitor.getJsClassname | String getJsClassname(TypeElement typeElement) {
DataService dsAnno = typeElement.getAnnotation(DataService.class);
String name = dsAnno.name();
if (name.isEmpty()) {
name = typeElement.getSimpleName().toString();
}
return name;
} | java | String getJsClassname(TypeElement typeElement) {
DataService dsAnno = typeElement.getAnnotation(DataService.class);
String name = dsAnno.name();
if (name.isEmpty()) {
name = typeElement.getSimpleName().toString();
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ocelotds/ocelot | ocelot-processor/src/main/java/org/ocelotds/processors/visitors/AbstractDataServiceVisitor.java | AbstractDataServiceVisitor.browseAndWriteMethods | void browseAndWriteMethods(List<ExecutableElement> methodElements, String classname, Writer writer) throws IOException {
Collection<String> methodProceeds = new ArrayList<>();
boolean first = true;
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writer.append(COMMA).append(CR);
}
visitMethodElement(classname, methodElement, writer);
first = false;
}
}
} | java | void browseAndWriteMethods(List<ExecutableElement> methodElements, String classname, Writer writer) throws IOException {
Collection<String> methodProceeds = new ArrayList<>();
boolean first = true;
for (ExecutableElement methodElement : methodElements) {
if (isConsiderateMethod(methodProceeds, methodElement)) {
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writer.append(COMMA).append(CR);
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visitMethodElement(classname, methodElement, writer);
first = false;
}
}
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ocelotds/ocelot | ocelot-processor/src/main/java/org/ocelotds/processors/visitors/AbstractDataServiceVisitor.java | AbstractDataServiceVisitor.getOrderedMethods | protected List<ExecutableElement> getOrderedMethods(TypeElement typeElement, Comparator<ExecutableElement> comparator) {
List<ExecutableElement> methods = ElementFilter.methodsIn(typeElement.getEnclosedElements());
Collections.sort(methods, comparator);
return methods;
} | java | protected List<ExecutableElement> getOrderedMethods(TypeElement typeElement, Comparator<ExecutableElement> comparator) {
List<ExecutableElement> methods = ElementFilter.methodsIn(typeElement.getEnclosedElements());
Collections.sort(methods, comparator);
return methods;
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ocelotds/ocelot | ocelot-processor/src/main/java/org/ocelotds/processors/visitors/AbstractDataServiceVisitor.java | AbstractDataServiceVisitor.getArgumentsType | List<String> getArgumentsType(ExecutableElement methodElement) {
ExecutableType methodType = (ExecutableType) methodElement.asType();
List<String> res = new ArrayList<>();
for (TypeMirror argumentType : methodType.getParameterTypes()) {
res.add(argumentType.toString());
}
return res;
} | java | List<String> getArgumentsType(ExecutableElement methodElement) {
ExecutableType methodType = (ExecutableType) methodElement.asType();
List<String> res = new ArrayList<>();
for (TypeMirror argumentType : methodType.getParameterTypes()) {
res.add(argumentType.toString());
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ocelotds/ocelot | ocelot-processor/src/main/java/org/ocelotds/processors/visitors/AbstractDataServiceVisitor.java | AbstractDataServiceVisitor.getArguments | List<String> getArguments(ExecutableElement methodElement) {
List<String> res = new ArrayList<>();
for (VariableElement variableElement : methodElement.getParameters()) {
res.add(variableElement.toString());
}
return res;
} | java | List<String> getArguments(ExecutableElement methodElement) {
List<String> res = new ArrayList<>();
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dkpro/dkpro-statistics | dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/coding/CodingAnnotationStudy.java | CodingAnnotationStudy.stripCategories | public CodingAnnotationStudy stripCategories(final Object keepCategory,
final Object nullCategory) {
CodingAnnotationStudy result = new CodingAnnotationStudy(getRaterCount());
for (ICodingAnnotationItem item : getItems()) {
CodingAnnotationItem newItem = new CodingAnnotationItem(raters.size());
for (IAnnotationUnit unit : item.getUnits()) {
Object newCategory;
if (!keepCategory.equals(unit.getCategory())) {
newCategory = nullCategory;
}
else {
newCategory = keepCategory;
}
newItem.addUnit(result.createUnit(result.items.size(),
unit.getRaterIdx(), newCategory));
}
result.items.add(newItem);
}
return result;
} | java | public CodingAnnotationStudy stripCategories(final Object keepCategory,
final Object nullCategory) {
CodingAnnotationStudy result = new CodingAnnotationStudy(getRaterCount());
for (ICodingAnnotationItem item : getItems()) {
CodingAnnotationItem newItem = new CodingAnnotationItem(raters.size());
for (IAnnotationUnit unit : item.getUnits()) {
Object newCategory;
if (!keepCategory.equals(unit.getCategory())) {
newCategory = nullCategory;
}
else {
newCategory = keepCategory;
}
newItem.addUnit(result.createUnit(result.items.size(),
unit.getRaterIdx(), newCategory));
}
result.items.add(newItem);
}
return result;
} | [
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hageldave/ImagingKit | ImagingKit_Fourier/src/main/java/hageldave/imagingkit/fourier/ComplexImg.java | ComplexImg.computePhase | public double computePhase(int idx){
double r = real[idx];
double i = imag[idx];
return atan2(r, i);
} | java | public double computePhase(int idx){
double r = real[idx];
double i = imag[idx];
return atan2(r, i);
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jenkinsci/gmaven | gmaven-runtime/gmaven-runtime-loader/src/main/java/org/codehaus/gmaven/runtime/loader/DefaultProviderSelector.java | DefaultProviderSelector.findLoaders | private Map findLoaders() {
Map loaders = getContainer().getComponentDescriptorMap(ProviderLoader.class.getName());
if (loaders == null) {
throw new Error("No provider loaders found");
}
Set keys = loaders.keySet();
Map found = null;
ProviderLoader defaultLoader = null;
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String key = (String)iter.next();
ProviderLoader loader;
try {
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}
catch (Exception e) {
log.warn("Failed to lookup provider loader for key: {}", key, e);
continue;
}
if (loader != null) {
if (found == null) {
// we need an ordered map
found = new LinkedHashMap();
}
if (key.equals(SELECT_DEFAULT)) {
defaultLoader = loader;
}
else {
found.put(key, loader);
}
}
}
// the default should be added at the end (as fallback)
assert defaultLoader != null;
found.put(SELECT_DEFAULT, defaultLoader);
return found;
} | java | private Map findLoaders() {
Map loaders = getContainer().getComponentDescriptorMap(ProviderLoader.class.getName());
if (loaders == null) {
throw new Error("No provider loaders found");
}
Set keys = loaders.keySet();
Map found = null;
ProviderLoader defaultLoader = null;
for (Iterator iter = keys.iterator(); iter.hasNext();) {
String key = (String)iter.next();
ProviderLoader loader;
try {
loader = (ProviderLoader) getContainer().lookup(ProviderLoader.class.getName(), key);
}
catch (Exception e) {
log.warn("Failed to lookup provider loader for key: {}", key, e);
continue;
}
if (loader != null) {
if (found == null) {
// we need an ordered map
found = new LinkedHashMap();
}
if (key.equals(SELECT_DEFAULT)) {
defaultLoader = loader;
}
else {
found.put(key, loader);
}
}
}
// the default should be added at the end (as fallback)
assert defaultLoader != null;
found.put(SELECT_DEFAULT, defaultLoader);
return found;
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riversun/finbin | src/main/java/org/riversun/finbin/BinaryUtil.java | BinaryUtil.getBytes | public static byte[] getBytes(String text) {
byte[] bytes = new byte[] {};
try {
bytes = text.getBytes("utf-8");
} catch (UnsupportedEncodingException e) {
}
return bytes;
} | java | public static byte[] getBytes(String text) {
byte[] bytes = new byte[] {};
try {
bytes = text.getBytes("utf-8");
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return bytes;
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riversun/finbin | src/main/java/org/riversun/finbin/BinaryUtil.java | BinaryUtil.loadBytesFromFile | public static byte[] loadBytesFromFile(File file) {
byte[] bytes = null;
try {
bytes = Files.readAllBytes(Paths.get(file.getAbsolutePath()));
} catch (IOException e) {
e.printStackTrace();
}
return bytes;
} | java | public static byte[] loadBytesFromFile(File file) {
byte[] bytes = null;
try {
bytes = Files.readAllBytes(Paths.get(file.getAbsolutePath()));
} catch (IOException e) {
e.printStackTrace();
}
return bytes;
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riversun/finbin | src/main/java/org/riversun/finbin/BinaryUtil.java | BinaryUtil.saveBytesToFile | public static void saveBytesToFile(byte[] data, File file) {
if (data == null) {
return;
}
FileOutputStream fos = null;
BufferedOutputStream bos = null;
try {
fos = new FileOutputStream(file);
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}
if (fos != null) {
try {
fos.close();
} catch (IOException e) {
e.printStackTrace();
}
}
}
} | java | public static void saveBytesToFile(byte[] data, File file) {
if (data == null) {
return;
}
FileOutputStream fos = null;
BufferedOutputStream bos = null;
try {
fos = new FileOutputStream(file);
bos = new BufferedOutputStream(fos);
bos.write(data);
bos.flush();
} catch (FileNotFoundException e) {
e.printStackTrace();
} catch (IOException e) {
e.printStackTrace();
} finally {
if (bos != null) {
try {
bos.close();
} catch (IOException e) {
e.printStackTrace();
}
}
if (fos != null) {
try {
fos.close();
} catch (IOException e) {
e.printStackTrace();
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}
}
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hageldave/ImagingKit | ImagingKit_Core/src/main/java/hageldave/imagingkit/core/io/ImageLoader.java | ImageLoader.loadImage | public static BufferedImage loadImage(String fileName){
File f = new File(fileName);
if(f.exists()){
return loadImage(f);
}
throw new ImageLoaderException(new FileNotFoundException(fileName));
} | java | public static BufferedImage loadImage(String fileName){
File f = new File(fileName);
if(f.exists()){
return loadImage(f);
}
throw new ImageLoaderException(new FileNotFoundException(fileName));
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hageldave/ImagingKit | ImagingKit_Core/src/main/java/hageldave/imagingkit/core/io/ImageLoader.java | ImageLoader.loadImage | public static BufferedImage loadImage(File file){
try {
BufferedImage bimg = ImageIO.read(file);
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throw new ImageLoaderException("Could not load Image! ImageIO.read() returned null.");
}
return bimg;
} catch (IOException e) {
throw new ImageLoaderException(e);
}
} | java | public static BufferedImage loadImage(File file){
try {
BufferedImage bimg = ImageIO.read(file);
if(bimg == null){
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}
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/core/mtc/MessageToClientManager.java | MessageToClientManager._createMessageToClient | MessageToClient _createMessageToClient(MessageFromClient message, T session) {
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try {
Class cls = Class.forName(message.getDataService());
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injectSession(method.getParameterTypes(), arguments, session);
messageToClient.setResult(method.invoke(dataService, arguments.toArray()));
if (method.isAnnotationPresent(JsonMarshaller.class)) {
messageToClient.setJson(argumentServices.getJsonResultFromSpecificMarshaller(method.getAnnotation(JsonMarshaller.class), messageToClient.getResponse()));
}
try {
Method nonProxiedMethod = methodServices.getNonProxiedMethod(cls, method.getName(), method.getParameterTypes());
messageToClient.setDeadline(cacheManager.processCacheAnnotations(nonProxiedMethod, message.getParameters()));
} catch (NoSuchMethodException ex) {
logger.error("Fail to process extra annotations (JsCacheResult, JsCacheRemove) for method : " + method.getName(), ex);
}
logger.debug("Method {} proceed messageToClient : {}.", method.getName(), messageToClient);
} catch (InvocationTargetException ex) {
Throwable cause = ex.getCause();
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} else {
messageToClient.setFault(faultServices.buildFault(cause));
}
} catch (Throwable ex) {
messageToClient.setFault(faultServices.buildFault(ex));
}
return messageToClient;
} | java | MessageToClient _createMessageToClient(MessageFromClient message, T session) {
MessageToClient messageToClient = new MessageToClient();
messageToClient.setId(message.getId());
try {
Class cls = Class.forName(message.getDataService());
Object dataService = this.getDataService(session, cls);
logger.debug("Process message {}", message);
List<Object> arguments = getArrayList();
Method method = methodServices.getMethodFromDataService(cls, message, arguments);
injectSession(method.getParameterTypes(), arguments, session);
messageToClient.setResult(method.invoke(dataService, arguments.toArray()));
if (method.isAnnotationPresent(JsonMarshaller.class)) {
messageToClient.setJson(argumentServices.getJsonResultFromSpecificMarshaller(method.getAnnotation(JsonMarshaller.class), messageToClient.getResponse()));
}
try {
Method nonProxiedMethod = methodServices.getNonProxiedMethod(cls, method.getName(), method.getParameterTypes());
messageToClient.setDeadline(cacheManager.processCacheAnnotations(nonProxiedMethod, message.getParameters()));
} catch (NoSuchMethodException ex) {
logger.error("Fail to process extra annotations (JsCacheResult, JsCacheRemove) for method : " + method.getName(), ex);
}
logger.debug("Method {} proceed messageToClient : {}.", method.getName(), messageToClient);
} catch (InvocationTargetException ex) {
Throwable cause = ex.getCause();
if (ConstraintViolationException.class.isInstance(cause)) {
messageToClient.setConstraints(constraintServices.extractViolations((ConstraintViolationException) cause));
} else {
messageToClient.setFault(faultServices.buildFault(cause));
}
} catch (Throwable ex) {
messageToClient.setFault(faultServices.buildFault(ex));
}
return messageToClient;
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/core/mtc/MessageToClientManager.java | MessageToClientManager.injectSession | void injectSession(Class<?>[] parameterTypes, List<Object> arguments, T session) {
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/store/impl/DefaultVOMSTrustStore.java | DefaultVOMSTrustStore.loadCertificateFromFile | private void loadCertificateFromFile(File file) {
certificateFileSanityChecks(file);
try {
X509Certificate aaCert = CertificateUtils.loadCertificate(
new FileInputStream(file), Encoding.PEM);
// Get certificate subject hash, using the CANL implementation for CA
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String aaCertHash = getOpensslCAHash(aaCert.getSubjectX500Principal());
// Store certificate in the local map
localAACertificatesByHash.put(aaCertHash, aaCert);
synchronized (listenerLock) {
listener.notifyCertificateLoadEvent(aaCert, file);
}
} catch (IOException e) {
String errorMessage = String.format(
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throw new VOMSError(errorMessage, e);
}
} | java | private void loadCertificateFromFile(File file) {
certificateFileSanityChecks(file);
try {
X509Certificate aaCert = CertificateUtils.loadCertificate(
new FileInputStream(file), Encoding.PEM);
// Get certificate subject hash, using the CANL implementation for CA
// files
String aaCertHash = getOpensslCAHash(aaCert.getSubjectX500Principal());
// Store certificate in the local map
localAACertificatesByHash.put(aaCertHash, aaCert);
synchronized (listenerLock) {
listener.notifyCertificateLoadEvent(aaCert, file);
}
} catch (IOException e) {
String errorMessage = String.format(
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throw new VOMSError(errorMessage, e);
}
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/store/impl/DefaultVOMSTrustStore.java | DefaultVOMSTrustStore.certificateFileSanityChecks | private void certificateFileSanityChecks(File certFile) {
if (!certFile.exists())
throw new VOMSError("Local VOMS trusted certificate does not exist:"
+ certFile.getAbsolutePath());
if (!certFile.canRead())
throw new VOMSError("Local VOMS trusted certificate is not readable:"
+ certFile.getAbsolutePath());
} | java | private void certificateFileSanityChecks(File certFile) {
if (!certFile.exists())
throw new VOMSError("Local VOMS trusted certificate does not exist:"
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if (!certFile.canRead())
throw new VOMSError("Local VOMS trusted certificate is not readable:"
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/store/impl/DefaultVOMSTrustStore.java | DefaultVOMSTrustStore.directorySanityChecks | private void directorySanityChecks(File directory) {
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if (!directory.isDirectory())
throw new VOMSError("Local trust directory is not a directory:"
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if (!directory.canRead())
throw new VOMSError("Local trust directory is not readable:"
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if (!directory.canExecute())
throw new VOMSError("Local trust directory is not traversable:"
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} | java | private void directorySanityChecks(File directory) {
if (!directory.exists())
throw new VOMSError("Local trust directory does not exists:"
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if (!directory.isDirectory())
throw new VOMSError("Local trust directory is not a directory:"
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if (!directory.canRead())
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if (!directory.canExecute())
throw new VOMSError("Local trust directory is not traversable:"
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darcy-framework/darcy-ui | src/main/java/com/redhat/darcy/ui/matchers/LoadConditionMatcher.java | LoadConditionMatcher.doesItemMatchAppropriateCondition | private boolean doesItemMatchAppropriateCondition(Object item) {
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/web/rest/RsJsServices.java | RsJsServices.getClassnameFromProxy | String getClassnameFromProxy(Object dataservice) {
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/web/rest/RsJsServices.java | RsJsServices.getClassnameFromProxyname | String getClassnameFromProxyname(String proxyname) {
Pattern pattern = Pattern.compile("[@$]");
Matcher matcher = pattern.matcher(proxyname);
matcher.find();
matcher.start();
return proxyname.substring(0, matcher.start());
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Pattern pattern = Pattern.compile("[@$]");
Matcher matcher = pattern.matcher(proxyname);
matcher.find();
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return proxyname.substring(0, matcher.start());
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italiangrid/voms-api-java | src/main/java/org/italiangrid/voms/util/CertificateValidatorBuilder.java | CertificateValidatorBuilder.buildCertificateValidator | public static X509CertChainValidatorExt buildCertificateValidator() {
return buildCertificateValidator(
DefaultVOMSValidator.DEFAULT_TRUST_ANCHORS_DIR, null, null, 0L,
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return buildCertificateValidator(
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hageldave/ImagingKit | ImagingKit_Core/src/main/java/hageldave/imagingkit/core/scientific/ColorImg.java | ColorImg.getIndexOfMaxValue | public int getIndexOfMaxValue(int channel){
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hageldave/ImagingKit | ImagingKit_Core/src/main/java/hageldave/imagingkit/core/scientific/ColorImg.java | ColorImg.getIndexOfMinValue | public int getIndexOfMinValue(int channel){
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double[] values = getData()[channel];
int index = 0;
double val = values[index];
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hageldave/ImagingKit | ImagingKit_Core/src/main/java/hageldave/imagingkit/core/scientific/ColorImg.java | ColorImg.setValue | public void setValue(final int channel, final int x, final int y, final double value){
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/core/mtc/RSMonitorDecorator.java | RSMonitorDecorator.isMonitored | boolean isMonitored(HttpSession session) {
boolean monitor = false;
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monitor = ((Options) session.getAttribute(Constants.Options.OPTIONS)).isMonitor();
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return monitor;
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boolean monitor = false;
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/messageControl/MessageControllerCache.java | MessageControllerCache.saveToCache | public void saveToCache(String topic, Class<? extends JsTopicMessageController> cls) {
if(null != topic && null != cls) {
messageControllers.put(topic, cls);
}
} | java | public void saveToCache(String topic, Class<? extends JsTopicMessageController> cls) {
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ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/messageControl/MessageControllerCache.java | MessageControllerCache.loadFromCache | public JsTopicMessageController loadFromCache(String topic) {
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return null;
} | java | public JsTopicMessageController loadFromCache(String topic) {
if(null == topic) {
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}
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dkpro/dkpro-statistics | dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/unitizing/UnitizingAnnotationStudy.java | UnitizingAnnotationStudy.findNextUnit | public static IUnitizingAnnotationUnit findNextUnit(
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dkpro/dkpro-statistics | dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/unitizing/UnitizingAnnotationStudy.java | UnitizingAnnotationStudy.findNextUnit | public static IUnitizingAnnotationUnit findNextUnit(
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] | 0b0e93dc49223984964411cbc6df420ba796a8cb | https://github.com/dkpro/dkpro-statistics/blob/0b0e93dc49223984964411cbc6df420ba796a8cb/dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/unitizing/UnitizingAnnotationStudy.java#L127-L130 | train |
dkpro/dkpro-statistics | dkpro-statistics-agreement/src/main/java/org/dkpro/statistics/agreement/unitizing/UnitizingAnnotationStudy.java | UnitizingAnnotationStudy.findNextUnit | public static IUnitizingAnnotationUnit findNextUnit(
final Iterator<IUnitizingAnnotationUnit> units, int raterIdx,
final Object category) {
while (units.hasNext()) {
IUnitizingAnnotationUnit result = units.next();
if (category != null && !category.equals(result.getCategory())) {
continue;
}
if (raterIdx < 0 || result.getRaterIdx() == raterIdx) {
return result;
}
}
return null;
} | java | public static IUnitizingAnnotationUnit findNextUnit(
final Iterator<IUnitizingAnnotationUnit> units, int raterIdx,
final Object category) {
while (units.hasNext()) {
IUnitizingAnnotationUnit result = units.next();
if (category != null && !category.equals(result.getCategory())) {
continue;
}
if (raterIdx < 0 || result.getRaterIdx() == raterIdx) {
return result;
}
}
return null;
} | [
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cortical-io/java-client-sdk | retina-service-java-api-client/src/main/java/io/cortical/services/api/client/ApiInvoker.java | ApiInvoker.deserialize | public static Object deserialize(String json, String containerType, Class cls, NestedContent nestedContent) throws ApiException {
try{
if(("List".equals(containerType) || "Array".equals(containerType)) && nestedContent != null){
if(NestedContent.CONTEXT.equals(nestedContent)){
JavaType typeInfo = JsonUtil.getJsonMapper().getTypeFactory().constructFromCanonical("java.util.List<java.util.List<io.cortical.rest.model.Context>>");
Object response = (java.lang.Object) JsonUtil.getJsonMapper().readValue(json, typeInfo);
return response;
}else if(NestedContent.TERM.equals(nestedContent)){
JavaType typeInfo = JsonUtil.getJsonMapper().getTypeFactory().constructFromCanonical("java.util.List<java.util.List<io.cortical.rest.model.Term>>");
Object response = (java.lang.Object) JsonUtil.getJsonMapper().readValue(json, typeInfo);
return response;
}else{
return null;
}
}
else if("List".equals(containerType) || "Array".equals(containerType)) {
JavaType typeInfo = JsonUtil.getJsonMapper().getTypeFactory().constructCollectionType(List.class, cls);
List response = (List<?>) JsonUtil.getJsonMapper().readValue(json, typeInfo);
return response;
}
else if(String.class.equals(cls)) {
if(json != null && json.startsWith("\"") && json.endsWith("\"") && json.length() > 1)
return json.substring(1, json.length() - 2);
else
return json;
}
else {
return JsonUtil.getJsonMapper().readValue(json, cls);
}
}
catch (IOException e) {
throw new ApiException(500, e.getMessage());
}
} | java | public static Object deserialize(String json, String containerType, Class cls, NestedContent nestedContent) throws ApiException {
try{
if(("List".equals(containerType) || "Array".equals(containerType)) && nestedContent != null){
if(NestedContent.CONTEXT.equals(nestedContent)){
JavaType typeInfo = JsonUtil.getJsonMapper().getTypeFactory().constructFromCanonical("java.util.List<java.util.List<io.cortical.rest.model.Context>>");
Object response = (java.lang.Object) JsonUtil.getJsonMapper().readValue(json, typeInfo);
return response;
}else if(NestedContent.TERM.equals(nestedContent)){
JavaType typeInfo = JsonUtil.getJsonMapper().getTypeFactory().constructFromCanonical("java.util.List<java.util.List<io.cortical.rest.model.Term>>");
Object response = (java.lang.Object) JsonUtil.getJsonMapper().readValue(json, typeInfo);
return response;
}else{
return null;
}
}
else if("List".equals(containerType) || "Array".equals(containerType)) {
JavaType typeInfo = JsonUtil.getJsonMapper().getTypeFactory().constructCollectionType(List.class, cls);
List response = (List<?>) JsonUtil.getJsonMapper().readValue(json, typeInfo);
return response;
}
else if(String.class.equals(cls)) {
if(json != null && json.startsWith("\"") && json.endsWith("\"") && json.length() > 1)
return json.substring(1, json.length() - 2);
else
return json;
}
else {
return JsonUtil.getJsonMapper().readValue(json, cls);
}
}
catch (IOException e) {
throw new ApiException(500, e.getMessage());
}
} | [
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@param cls the class of the object
@param nestedContent contains the name of the Pojo, contained in a List of Lists. <code>null</code> if no nested content is present.
@throws APIException if an exception occurs during deserialization | [
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"."
] | 7a1ee811cd7c221690dc0a7e643c286c56cab921 | https://github.com/cortical-io/java-client-sdk/blob/7a1ee811cd7c221690dc0a7e643c286c56cab921/retina-service-java-api-client/src/main/java/io/cortical/services/api/client/ApiInvoker.java#L66-L101 | train |
ocelotds/ocelot | ocelot-web/src/main/java/org/ocelotds/topic/topicAccess/TopicAccessManager.java | TopicAccessManager.checkAccessTopic | public void checkAccessTopic(UserContext ctx, String topic) throws IllegalAccessException {
boolean tacPresent0 = checkAccessTopicGlobalAC(ctx, topic);
boolean tacPresent1 = checkAccessTopicFromJsTopicControl(ctx, topic);
boolean tacPresent2 = checkAccessTopicFromJsTopicControls(ctx, topic);
if (logger.isDebugEnabled() && !(tacPresent0 | tacPresent1 | tacPresent2)) {
logger.debug("No '{}' access control found in project, add {} implementation annotated with {}({}) in your project for add subscription security.", topic, JsTopicAccessController.class, JsTopicControl.class, topic);
}
} | java | public void checkAccessTopic(UserContext ctx, String topic) throws IllegalAccessException {
boolean tacPresent0 = checkAccessTopicGlobalAC(ctx, topic);
boolean tacPresent1 = checkAccessTopicFromJsTopicControl(ctx, topic);
boolean tacPresent2 = checkAccessTopicFromJsTopicControls(ctx, topic);
if (logger.isDebugEnabled() && !(tacPresent0 | tacPresent1 | tacPresent2)) {
logger.debug("No '{}' access control found in project, add {} implementation annotated with {}({}) in your project for add subscription security.", topic, JsTopicAccessController.class, JsTopicControl.class, topic);
}
} | [
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@param ctx
@param topic
@throws IllegalAccessException | [
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] | 5f0ac37afd8fa4dc9f7234a2aac8abbb522128e7 | https://github.com/ocelotds/ocelot/blob/5f0ac37afd8fa4dc9f7234a2aac8abbb522128e7/ocelot-web/src/main/java/org/ocelotds/topic/topicAccess/TopicAccessManager.java#L51-L58 | train |
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