plateform stringclasses 1
value | repo_name stringlengths 13 113 | name stringlengths 3 74 | ext stringclasses 1
value | path stringlengths 12 229 | size int64 23 843k | source_encoding stringclasses 9
values | md5 stringlengths 32 32 | text stringlengths 23 843k |
|---|---|---|---|---|---|---|---|---|
github | McStasMcXtrace/iFit-master | figure2xhtml.m | .m | iFit-master/Applications/x3d_version3g/figure2xhtml.m | 9,018 | utf_8 | 52df17e040100b318c594b410c3516ac | function figure2xhtml(varargin)
% This function FIGURE2XHTML converts the 3D objects of a Matlab figure
% to an in XHTML embedded X3D file. In a modern browser, you can now view
% your figure interactively because of the great X3DOM Library
% (Instant 3D the HTML way! http://www.x3dom.org/).
%
% Currently the fun... |
github | McStasMcXtrace/iFit-master | XMLaddString.m | .m | iFit-master/Applications/x3d_version3g/functions_xml/XMLaddString.m | 3,379 | utf_8 | f89c58b2f30e4c697cabddb1701decee | function data=XMLaddString(str,data)
n1=length(data.node);
if(isfieldempty(data.node(n1),'node'))
n2=length(data.node(n1).node);
if(isfieldempty(data.node(n1).node(n2),'node'))
n3=length(data.node(n1).node(n2).node);
if(isfieldempty(data.node(n1).node(n2).node(n3),'node'))
n4=... |
github | McStasMcXtrace/iFit-master | XMLtostring.m | .m | iFit-master/Applications/x3d_version3g/functions_xml/XMLtostring.m | 2,261 | utf_8 | 02d1765ef0ce50e9004fe2c2e944fe5d | function [strcell,nc,str]=XMLtostring(data,strcell,nc)
if(nargin<2), strcell=cell(1,100000); nc=[0 0]; end
nt=nc(2); nc=nc(1);
nl=length(data);
for i=1:nl
if(isfieldempty(data(i),'name'))
nc=nc+1; strcell{nc}=repmat('\t',1,nt);
if(isfieldempty(data(i),'property'))
nc=nc+1; strce... |
github | McStasMcXtrace/iFit-master | XMLaddProperty.m | .m | iFit-master/Applications/x3d_version3g/functions_xml/XMLaddProperty.m | 6,318 | utf_8 | c03a0b1d140a2335e7d6df5131a3ec68 | function data=XMLaddProperty(name,value,data)
n1=length(data.node);
if(isfieldempty(data.node(n1),'node'))
n2=length(data.node(n1).node);
if(isfieldempty(data.node(n1).node(n2),'node'))
n3=length(data.node(n1).node(n2).node);
if(isfieldempty(data.node(n1).node(n2).node(n3),'node'))
... |
github | McStasMcXtrace/iFit-master | XMLaddNode.m | .m | iFit-master/Applications/x3d_version3g/functions_xml/XMLaddNode.m | 3,685 | utf_8 | da99cc002ac945f0523ec9d0ea8f3a08 | function [data,loc]=XMLaddNode(name,data,loc)
if(nargin<2)
data=struct(); n1=0;
else
if(isfieldempty(data,'node')), n1=length(data.node); else n1=0; end
end
if(nargin<3)
loc=0;
end
if(loc==0);
data.node(n1+1).name=name;
else
if(isfieldempty(data.node(n1),'node')), n2=length(data.node(n1)... |
github | McStasMcXtrace/iFit-master | addlinemarker.m | .m | iFit-master/Applications/x3d_version3g/functions/addlinemarker.m | 4,159 | utf_8 | 5ec26dd985a0eb6bf0c9cda43b8c8542 | function data=addlinemarker(data,loc_scene,Obj)
a=data.tags.maxsize*Obj.MarkerSize*0.001;
V=Obj.V;
x=V(:,1);
y=V(:,2);
z=V(:,3);
x1=x-a;
x2=x+a;
x3=x-a*0.5;
x4=x+a*0.5;
y1=y-a;
y2=y+a;
y3=y-a*0.5;
y4=y+a*0.5;
z1=z-a;
z2=z+a;
switch(Obj.Marker(1))
case '*'
[E,V]=addlinepiece(x,x,y... |
github | McStasMcXtrace/iFit-master | sliceomatic.m | .m | iFit-master/Applications/sliceomatic/sliceomatic.m | 46,275 | utf_8 | a9367310e4b0ef4a5195ba82ae5a0464 | function sliceomatic(p1,p2,xmesh,ymesh,zmesh)
% SLICEOMATIC - Slice and isosurface volume exploration GUI
%
% SLICEOMATIC(DATA) - Use 3D double matrix DATA as a volume data
%
% Example:
%
% [x,y,z] = meshgrid(-2:.2:2, -2:.25:2, -2:.16:2);
% v = x .* exp(-x.^2 - y.^2 - z.^2);
% sliceomatic(v)
%
% Using... |
github | McStasMcXtrace/iFit-master | blinnblob.m | .m | iFit-master/Applications/sliceomatic/blinnblob.m | 1,004 | utf_8 | 239fa67f6c48a03641f3f1a6df023f87 | function v=blinnblob(centers,nx,ny,nz)
% Blinn's blobs
%
% Make something vaguely benzene like as follows:
%
% centers=[20+8*cos(theta);20+8*sin(theta);20+zeros(1,6)]'
% v=blob(centers,40,40,40)
% isosurface(v,.125)
% Written by Mike Garrity
% Copyright 2000, 2001, 2002, 2003, 2004, 2005 The MathWorks Inc
%
% From ACM... |
github | McStasMcXtrace/iFit-master | activelabel.m | .m | iFit-master/Applications/sliceomatic/private/activelabel.m | 531 | utf_8 | a7db5ca0c16cf6bd4123d6d2d5b25a19 | function activelabel(label, string)
% ACTIVELABEL(LABEL, STRING) - Create a label on GCA which is
% active. LABEL is the property of GCA whose label you are
% setting. STRING is the initial text string for the label.
% Copyright 2000, 2001, 2002, 2003, 2004, 2005 The MathWorks Inc
l = get(gca,label);
... |
github | McStasMcXtrace/iFit-master | slowset.m | .m | iFit-master/Applications/sliceomatic/private/slowset.m | 1,890 | utf_8 | 25154d50f242b5f4fc08f7c08502b2f8 | function slowset(handle, prop, value, increment)
% SLOWSET(H, 'PROPERTY', VALUE)
%
% Like SET, except that the property is set against the original
% value over several steps such that the value morphs from the
% starting value to the end value.
%
% H can be a vector of handles, but they must all accept PROPERTY.
%
% O... |
github | McStasMcXtrace/iFit-master | figmenus.m | .m | iFit-master/Applications/sliceomatic/private/figmenus.m | 20,406 | utf_8 | 035af2a0e7c396f2d9ee4571c5d5d792 | function outd = figmenus(d)
% Set up sliceomatic's gui menus within structure D
% Copyright 2000, 2001, 2002, 2003, 2004, 2005 The MathWorks Inc
%%% 2/18/05 RAB part in 3 parts %%%
% Main Figure Menu
set(gcf,'menubar','none');
% File menu
d.filemenu = uimenu(gcf,'label','File');
d.fcopy = uimenu(d.fileme... |
github | McStasMcXtrace/iFit-master | sw_drawpoly.m | .m | iFit-master/Applications/SpinW/m_files/sw_drawpoly.m | 6,444 | utf_8 | eb4d8442bcc6e6d64b5f2d29ad88ed78 | function polyDat = sw_drawpoly(varargin)
% draws polyhedra around atoms on the structure plot
%
% polyDat = SW_DRAWPOLY(Option1, Value1, ...)
%
% Options:
%
% cAtom Indices of atom types for the center atom
% Default is 1. Can be also a string or strings in a cell that
% identify atoms ... |
github | McStasMcXtrace/iFit-master | sw_neutron.m | .m | iFit-master/Applications/SpinW/m_files/sw_neutron.m | 9,585 | utf_8 | fa25af1de670c279a9853ed868cf32c4 | function spectra = sw_neutron(spectra, varargin)
% calculates neutron scattering intensity for spin wave spectrum
%
% spectra = SW_NEUTRON(spectra, 'Option1', Value1' ...)
%
% It calculates neutron scattering intensity for polarised and unpolarised
% neutron scattering on spin waves.
%
% Input:
%
% spectra Input stru... |
github | McStasMcXtrace/iFit-master | sw_basismat.m | .m | iFit-master/Applications/SpinW/m_files/sw_basismat.m | 6,867 | utf_8 | 9d6ea1a05b63dd15ca0f6d1b92b3cfda | function [M, asym] = sw_basismat(symOp, r, tol)
% determines allowed tensor components in a given point group symmetry
%
% [M, asym] = SW_BASISMAT(symOp, r, tol)
%
% It determines the allowed matrix elements compatible with a given point
% group symmetry. The matrix can describe exchange interaction or single
% ion an... |
github | McStasMcXtrace/iFit-master | sw_filelist.m | .m | iFit-master/Applications/SpinW/m_files/sw_filelist.m | 5,101 | utf_8 | e603107de5e61990a11def265ac0d33f | function varargout = sw_filelist(varargin)
% lists spinw data in the Matlab workspace or in a .mat file
%
% list = SW_FILELIST({'Option1',Value1,...)
%
%
% Options:
%
% fName To check data stored in a .mat file, fName contains the path as
% a string.
% sort To sort according to which column (positive... |
github | McStasMcXtrace/iFit-master | sw_update.m | .m | iFit-master/Applications/SpinW/m_files/sw_update.m | 5,102 | utf_8 | 67bd498eb5172dd01f1540997f99ddf8 | function onlineRev = sw_update(installDir)
% updates the SpinW installation from the internet
%
% SW_UPDATE()
%
% {onlineRev} = SW_UPDATE(installDir)
%
% sw_update creates a new folder with the latest release beside the current
% SpinW installation and add the new version to the working path (and
% removing the old one... |
github | McStasMcXtrace/iFit-master | sw_structfigure.m | .m | iFit-master/Applications/SpinW/m_files/sw_structfigure.m | 17,516 | utf_8 | d3fb0a25fc0168539ddba11b4a6041e9 | function hFigure = sw_structfigure
% creates figure for crystal structure plot
%
% hFigure = SW_STRUCTFIGURE()
%
% See also SW.PLOT.
%
% $Name: SpinW$ ($Version: 2.1$)
% $Author: S. Toth$ ($Contact: sandor.toth@psi.ch$)
% $Revision: 238 $ ($Date: 07-Feb-2015 $)
% $License: GNU GENERAL PUBLIC LICENSE$
% Positi... |
github | McStasMcXtrace/iFit-master | sw_gensymcoupling.m | .m | iFit-master/Applications/SpinW/m_files/sw_gensymcoupling.m | 3,701 | utf_8 | 001b461df064011d8d14e765241e0a91 | function [genCp, ugenCp] = sw_gensymcoupling(obj, coupling, sym, tol, fitmode)
% generates all equivalent couplings, using space group symmetry
%
% [genCp ugenCp] = SW_GENSYMCOUPLING(obj, coupling, sym, {tol})
%
% Input:
%
% obj sw class object.
% coupling Vector, contains the original coupling. Dimensions are [... |
github | McStasMcXtrace/iFit-master | sw_plotspec.m | .m | iFit-master/Applications/SpinW/m_files/sw_plotspec.m | 24,621 | utf_8 | 65cbcb77168645a2f43552e85a59ff35 | function [fHandle0, pHandle0] = sw_plotspec(spectra, varargin)
% plots spin wave spectrum
%
% [fHandle, pHandle] = SW_PLOTSPEC(spectra, 'option1', value1 ...)
%
% Options:
%
% mode Choose the type of plot, either a string (or number):
% 'disp' dispersion (1),
% 'int' intensi... |
github | McStasMcXtrace/iFit-master | sw_multicolor.m | .m | iFit-master/Applications/SpinW/m_files/sw_multicolor.m | 3,114 | utf_8 | 62ef46b2e1c5d8bb0e6d1e92be0ce386 | function cMat = sw_multicolor(vMat, cMap, cLim, nCol, pflipud)
% creates RGB color data for multiple 2D overlapping plots
%
% cMat = sw_multicolor(vMat, cMap, cLim, {nCol}, {flipud})
%
% Input:
%
% vMat Matrix that contains the input 2D data, dimensions are
% [d1 d2 nPlot]. Where each plot has a dimensio... |
github | McStasMcXtrace/iFit-master | sw_draw.m | .m | iFit-master/Applications/SpinW/m_files/sw_draw.m | 8,971 | utf_8 | 4943ef1c0568ea42d1b04840148a1b97 | function polyDat = sw_draw(varargin)
% plots additional object onto the crystal structure
%
% polyDat = SW_DRAW(Option1, Value1, ...)
%
% It plots extra objects (bonds, polyhedra) onto the crystal structure
% plot produced previously by sw.plot() function.
%
% Options:
%
% mode Selects what to plot:
% ... |
github | McStasMcXtrace/iFit-master | importcif.m | .m | iFit-master/Applications/SpinW/m_files/@cif/importcif.m | 9,357 | utf_8 | 15d617b7243213475295036a2e9632dc | function [cifdat] = importcif(~, dataStr)
% imports .cif data from file, web or string
% if exist(dataStr,'file') == 2
% % get the name of the file
% fid = fopen(dataStr);
% source = fopen(fid);
% fclose(fid);
%
% cifStr = regexp(fileread(dataStr), ['(?:' sprintf('\n') ')+'], 'split');
% i... |
github | McStasMcXtrace/iFit-master | gencoupling.m | .m | iFit-master/Applications/SpinW/m_files/@sw/gencoupling.m | 8,370 | utf_8 | 61e101edff0de1c18e9cbe545c4638aa | function gencoupling(obj, varargin)
% generates the COUPLING property of sw object
%
% GENCOUPLING(obj, 'option1', value, ...)
%
% The function calculates equivalent bonds between magnetic atoms. These
% are determined either based on crystal symmetry or bond length (with
% tolDist tolerance). If the space group... |
github | McStasMcXtrace/iFit-master | plot.m | .m | iFit-master/Applications/SpinW/m_files/@sw/plot.m | 53,448 | utf_8 | 5a0b1090126323ab8e079940a3cca9f4 | function varargout = plot(obj, varargin)
% plots crystal structure, magnetic structure, anisotropy and couplings
%
% [hFigure, handle] = PLOT(obj, 'option1', value1, ...)
%
% The function plots the atoms and couplings stored in obj onto a Matlab
% figure. Optionally a script output can be produced that creates a ... |
github | McStasMcXtrace/iFit-master | fitspec.m | .m | iFit-master/Applications/SpinW/m_files/@sw/fitspec.m | 11,527 | utf_8 | 0cb0e6de78d1102b7e13ddcdc018880e | function fitsp = fitspec(obj, varargin)
% fits spin wave spectra to experimental spectral data
%
% fitsp = FITSPEC(obj, 'Option1', Value1, ...)
%
% Options:
%
% epsilon Small number that controls wether the magnetic structure is
% incommensurate or commensurate, default value is 1e-5.
%
% func Function... |
github | McStasMcXtrace/iFit-master | anneal.m | .m | iFit-master/Applications/SpinW/m_files/@sw/anneal.m | 34,865 | utf_8 | 1d7569227111be46edc51718bea2b5ab | function stat = anneal(obj, varargin)
% performs simulated annealing on the magnetic structure
%
% stat = ANNEAL(obj, 'option1', value1 ...)
%
% The function can deal only with single ion anisotropy and isotropic
% exchange interactions in 1, 2 or 3 spin dimensions.
% General and antisymmetric exchage interactio... |
github | McStasMcXtrace/iFit-master | optmagstr.m | .m | iFit-master/Applications/SpinW/m_files/@sw/optmagstr.m | 9,335 | utf_8 | 9a1a4a81a1cb1250606ab91c8463fce8 | function optm = optmagstr(obj, varargin)
% optimises magnetic structure by minimizing the energy using non-linear optimization algorithms
%
% optm = OPTMAGSTR(obj, Option1, Value1, ...)
%
% Input:
%
% obj sw class object.
%
% Options:
%
% func Function that produce the magnetic moments, ordering wave
% ... |
github | McStasMcXtrace/iFit-master | export.m | .m | iFit-master/Applications/SpinW/m_files/@sw/export.m | 8,473 | utf_8 | 2a423e7febd1321432fded8d8e536d02 | function out = export(obj, varargin)
% export data from sw object into different file formats
%
% out = EXPORT(obj, 'Option1', Value1, ...)
%
% Different part of the sw object data can be exported selected by the
% 'format' option. Right now the following formats are supported:
%
% 'pcr' Creates part of a .pcr file... |
github | McStasMcXtrace/iFit-master | strword.m | .m | iFit-master/Applications/SpinW/external/strword.m | 1,042 | utf_8 | 2c8bb3788de9c1504e458b70626bf04a | function out = strword(str, idx, last)
% extract words separated by whitespace from string
%
% out = strword(str, idx, {last})
%
% Input:
%
% str String input.
% idx indexes of the words to be extracted.
% last If true, the last word is given if idx contains an element
% larger than the word ... |
github | McStasMcXtrace/iFit-master | makecolormap.m | .m | iFit-master/Applications/SpinW/external/makecolormap.m | 1,834 | utf_8 | 41c24320a20acbe3f970daab69f2b8e9 | function cMap = makecolormap(varargin)
%% MAKECOLORMAP makes smoothly varying colormaps
% a = makeColorMap(beginColor, middleColor, endColor, numSteps);
% a = makeColorMap(beginColor, endColor, numSteps);
% a = makeColorMap(beginColor, middleColor, endColor);
% a = makeColorMap(beginColor, endColor);
%
% all col... |
github | McStasMcXtrace/iFit-master | eigenshuffle.m | .m | iFit-master/Applications/SpinW/external/eigenshuffle.m | 13,119 | utf_8 | 01dda69fa53a8b400b706d30d8db6bac | function [Vseq,Dseq] = eigenshuffle(Asequence)
% eigenshuffle: Consistent sorting for an eigenvalue/vector sequence
% [Vseq,Dseq] = eigenshuffle(Asequence)
%
% Includes munkres.m (by gracious permission from Yi Cao)
% to choose the appropriate permutation. This greatly
% enhances the speed of eigenshuffle over my previ... |
github | McStasMcXtrace/iFit-master | sw_fminsearchbnd.m | .m | iFit-master/Applications/SpinW/external/fminsearchbnd/sw_fminsearchbnd.m | 8,128 | utf_8 | 5cb74f77e923e7bf4f0c0823f80cab7b | function [x,fval,exitflag,output] = sw_fminsearchbnd(fun,x0,LB,UB,options,varargin)
% FMINSEARCHBND: FMINSEARCH, but with bound constraints by transformation
% usage: x=FMINSEARCHBND(fun,x0)
% usage: x=FMINSEARCHBND(fun,x0,LB)
% usage: x=FMINSEARCHBND(fun,x0,LB,UB)
% usage: x=FMINSEARCHBND(fun,x0,LB,UB,options)
% usage... |
github | McStasMcXtrace/iFit-master | uiinspect.m | .m | iFit-master/Applications/uiinspect/uiinspect.m | 133,041 | utf_8 | 8997c5bb18a7c0b7f987f6d2dbe203d4 | function hFig = uiinspect(obj, fig)
% uiinspect Inspect an object handle (Java/COM/HG) and display its methods/props/callbacks in a unified window
%
% Syntax:
% hFig = uiinspect(obj, hFig) % hFig input argument is optional
%
% Description:
% UIINSPECT(OBJ) inspects an object handle (e.g., Java, COM, Han... |
github | McStasMcXtrace/iFit-master | paste.m | .m | iFit-master/Applications/CopyPaste/paste.m | 9,652 | utf_8 | bf7f5acc28513bb7fad714c663a5f5da | % PASTE copies the content of the clipboard to a variable; creates a
% string, a cell array, or a numerical array, depending on content.
%
% Usage:
% x = paste;
% x = paste(dec,sep,lf);
%
% The program will try to create an array. For this to succeed, the
% material that is passed from the clipboard must be... |
github | McStasMcXtrace/iFit-master | copy.m | .m | iFit-master/Applications/CopyPaste/copy.m | 6,238 | utf_8 | 06fe29236a1db0782c1d2bc8a53db0ac | % COPY puts a string, cell array, or numerical array into the clipboard,
% from where it can easily be imported by other programs.
%
% Usage:
% copy(x)
% copy(...,dec,sep,lf)
%
% x can be a numerical array (one or two dimensional), a cell array, a
% string, or a handle to a figure. The program does not hand... |
github | McStasMcXtrace/iFit-master | mdot.m | .m | iFit-master/Applications/m2html/mdot.m | 2,506 | utf_8 | b3e4416e18ee58ac9ab4cc621d7bbd6e | function mdot(mmat, dotfile,f)
%MDOT - Export a dependency graph into DOT language
% MDOT(MMAT, DOTFILE) loads a .mat file generated by M2HTML using option
% ('save','on') and writes an ascii file using the DOT language that can
% be drawn using <dot> or <neato> .
% MDOT(MMAT, DOTFILE,F) builds the graph containing... |
github | McStasMcXtrace/iFit-master | m2html.m | .m | iFit-master/Applications/m2html/m2html.m | 49,712 | utf_8 | f7f6f79fdfa3ab76415f0a775479f6aa | function m2html(varargin)
%M2HTML - Documentation Generator for Matlab M-files and Toolboxes in HTML
% M2HTML by itself generates an HTML documentation of the Matlab M-files found
% in the direct subdirectories of the current directory. HTML files are
% written in a 'doc' directory (created if necessary). All the o... |
github | McStasMcXtrace/iFit-master | doxysearch.m | .m | iFit-master/Applications/m2html/private/doxysearch.m | 7,714 | utf_8 | ebb1fad211432afc84e829c8563633c3 | function result = doxysearch(query,filename)
%DOXYSEARCH Search a query in a 'search.idx' file
% RESULT = DOXYSEARCH(QUERY,FILENAME) looks for request QUERY
% in FILENAME (Doxygen search.idx format) and returns a list of
% files responding to the request in RESULT.
%
% See also DOXYREAD, DOXYWRITE
% Copyright (C)... |
github | McStasMcXtrace/iFit-master | doxywrite.m | .m | iFit-master/Applications/m2html/private/doxywrite.m | 3,574 | utf_8 | 311087393513c11cc74ba8ccbd0804f6 | function doxywrite(filename, kw, statinfo, docinfo)
%DOXYWRITE Write a 'search.idx' file compatible with DOXYGEN
% DOXYWRITE(FILENAME, KW, STATINFO, DOCINFO) writes file FILENAME
% (Doxygen search.idx. format) using the cell array KW containing the
% word list, the sparse matrix (nbword x nbfile) with non-null value... |
github | McStasMcXtrace/iFit-master | doxyread.m | .m | iFit-master/Applications/m2html/private/doxyread.m | 3,083 | utf_8 | 5c7eb15b77ff6a556d409ac86bfc7c80 | function [statlist, docinfo] = doxyread(filename)
%DOXYREAD Read a 'search.idx' file generated by DOXYGEN
% STATLIST = DOXYREAD(FILENAME) reads FILENAME (Doxygen search.idx
% format) and returns the list of keywords STATLIST as a cell array.
% [STATLIST, DOCINFO] = DOXYREAD(FILENAME) also returns a cell array
% con... |
github | McStasMcXtrace/iFit-master | mifit.m | .m | iFit-master/Applications/miFit/mifit.m | 19,246 | utf_8 | 5ad7c866bd75c1e55a911d7d1b953fba | function varargout = mifit(varargin)
% miFit: a user interface to iFit
%
% The miFit application is a simple user interface to iFit.
% It consists in a main panel with menus.
%
% Data Sets:
% ----------
% The Data Sets files can be drag-n-dropped to be appended to the list. You
% may as well use the File/Open... |
github | McStasMcXtrace/iFit-master | mifit_Models_View_Parameters.m | .m | iFit-master/Applications/miFit/private/mifit_Models_View_Parameters.m | 13,064 | utf_8 | 9278195e4faa6fdee7140396c6639f41 | function stop=mifit_Models_View_Parameters(varargin)
% [internal] mifit_Models_View_Parameters: the window showing Model parameters
% get 1st selected Model from Data set or Models menu current choice
% Display a uitable with columns:
% [ Parameters | ParameterValues | ParameterUncertainty | constraints.fix... |
github | McStasMcXtrace/iFit-master | mcdisplay.m | .m | iFit-master/Applications/McStas/mcdisplay.m | 6,373 | UNKNOWN | 6fae728be94ec619fd58bb8c188d38bd | function mcdisplay(varargin)
%
% mcdisplay.m:
%
% Implementation of matlab functions for mcdisplay online plotting.
%
% Copyright 2003 Peter Willendrup, RIS�national laboratory
%
% Covers also the scripts
% PlotInstrument.m
% wait.m
% CheckNeutNumber.m
% ReshapeTransform.m
% CheckTimeout.m
% resume.m
%
% Written by: P.... |
github | McStasMcXtrace/iFit-master | ifitdeploy.m | .m | iFit-master/Applications/standalone/ifitdeploy.m | 6,221 | utf_8 | d43955bb4ecdc975ed652c121c64c92e | function ifitdeploy(target)
% ifitdeploy: standalone creation
%
% This function creates a standalone version of the iFit distribution.
% It requires the Matlab Compiler. Shortcuts/launchers are also created for Linux/Windows.
if ~exist('mcc'), return; end
% location of the iFit directory
cd(ifitpath); p=pwd; % get ... |
github | McStasMcXtrace/iFit-master | ifit.m | .m | iFit-master/Applications/standalone/ifit.m | 21,203 | utf_8 | 65ea17678eda7629a8fd7a472844217e | function ifit(varargin)
% Usage: ifit [options] arguments commands
%
% iFit executable from command line.
% Project page at <http://ifit.mccode.org>
%
% arguments:
% Any file name, including directories (imports all recursively).
% Files can also be given as distant URLs (via http and ftp), and as compress... |
github | McStasMcXtrace/iFit-master | launcher_read.m | .m | iFit-master/Applications/standalone/private/launcher_read.m | 2,050 | utf_8 | e0aecee7d49dfd8b448d50c9a55b3f78 | function [operator, comment] = launcher_read(filename)
% launcher_read: reads a .desktop (OpenDesktop/Linux) or .bat (Windows) launcher
%
% [operator, comment] = launcher_read(filename)
% reads a filename launcher, and retrieve the operator/command stored
% first test if this is a launcher
if nargin == 0, filena... |
github | McStasMcXtrace/iFit-master | launcher_write.m | .m | iFit-master/Applications/standalone/private/launcher_write.m | 4,884 | utf_8 | f6ec48b127ac1e5226f8068be7d9f1e7 | function [operator, comment] = launcher_write(filename, operator)
% launcher_write: writes a .desktop (OpenDesktop/Linux) or .bat (Windows) launcher
%
% [operator, comment] = launcher_write(filename, operator)
% writes a filename launcher, and feed-in the operator/command
% filename: char
% operator: char
% ... |
github | McStasMcXtrace/iFit-master | cif2hkl.m | .m | iFit-master/Scripts/Signal/cif2hkl.m | 12,332 | utf_8 | 1ee5024a6fa97d71b31d6b0b23e76519 | function [file_out, result] = cif2hkl(varargin)
% file_out = cif2hkl(file_in, file_out, lambda, mode, verbose)
%
% Read a CIF/CFL/SHX/PCR crystallographic description
% and generates a HKL F^2 reflection list.
%
% When the argument is a chemical formula (elements separated with spaces), or
% a COD ID, a search i... |
github | McStasMcXtrace/iFit-master | fconv.m | .m | iFit-master/Scripts/Signal/fconv.m | 6,871 | utf_8 | e3342bc86e0fad2e906ec0a51ec2fd12 | function y=fconv(x, h, shape)
%FCONV Fast Convolution/Correlation
% y = FCONV(x, h, shape) convolves x and h. A deconvolution mode is also possible.
% The correlation, instead of the convolution, can also be computed.
% This FFT based convolution should provide the same results as conv2 and convn.
% It works wi... |
github | McStasMcXtrace/iFit-master | gaussnd.m | .m | iFit-master/Scripts/Models/Factory/gaussnd.m | 6,511 | utf_8 | 2b93c0a5c70328e7fc46d88b4a36ff1d | function y=gaussnd(varargin)
% y = gaussnd(p, x, y, ..., signal) : nD Gaussian
%
% iFunc/gaussnd nD Gaussian fitting function
%
% y = R0 * exp(-[x,y,...]' * G * [x,y,...])
%
% a multi-dimensional Gaussian profile
% <http://en.wikipedia.org/wiki/Gaussian_function#Multi-dimensional_Gaussian_function>
%
% This mode... |
github | McStasMcXtrace/iFit-master | sqw_spinw.m | .m | iFit-master/Scripts/Models/Factory/sqw_spinw.m | 9,035 | utf_8 | 1c054f6b0b926d1773ccf4530d22a80c | function signal=sqw_spinw(varargin)
% model = sqw_spinw(sw, options) : S(q,w) dispersion(HKL) spin-wave Sqw4D
%
% iFunc/sqw_spinw: a 4D S(q,w) dispersion obtained from the
% spinw package from S. Toth. A SpinW object must first be created, and is then
% converted into an iFunc model for HKL evaluation. The intens... |
github | McStasMcXtrace/iFit-master | sqw_spinwave.m | .m | iFit-master/Scripts/Models/Factory/sqw_spinwave.m | 25,719 | utf_8 | 12ced9fd1e22f7772c3febd77f1f2377 | function s = sqw_spinwave(file, action)
% sqw_spinwave: build a SpinWave model (S. Petit/LLB) Sqw4D
%
% MODEL CREATION
%
% Performs a SPINWAVE calculation using S. Petit/LLB code. The input file can be:
%
% * a spinwave input file, such as MnFe4Si3.txt (in Data)
% * 'defaults' will use an example.
% * a CIF/CFL/S... |
github | McStasMcXtrace/iFit-master | mccode.m | .m | iFit-master/Scripts/Models/Factory/mccode.m | 35,861 | utf_8 | 786a602670d26183fe9f0bbc0299eab4 | function y = mccode(instr, options, parameters)
% y = mccode(instr, options, parameters) : McCode (McStas/McXtrace) instrument
%
% iFunc/mccode a McCode instrument
% y=model instrument
%
% MODEL CREATION:
% ------------------------------------------------------------------------------
% mccode(description)
% ... |
github | McStasMcXtrace/iFit-master | rietveld.m | .m | iFit-master/Scripts/Models/Factory/rietveld.m | 16,381 | utf_8 | 3715f1a177c496ab76f89d46c0c1e3e0 | function y = rietveld(sample, instr, varargin)
% model=rietveld(sample, instrument, ....) Rietveld refinement of powder/single crystal
%
% This function builds a fit model from:
% * a sample structure
% * a McCode instrument model (usually a diffractometer)
% The model can then be used for refinement as a usual fi... |
github | McStasMcXtrace/iFit-master | sqw_phonons.m | .m | iFit-master/Scripts/Models/Factory/sqw_phonons.m | 37,209 | utf_8 | 7e48ba074dfc5c729dbe486aae2d2ba2 | function signal=sqw_phonons(configuration, varargin)
% model=sqw_phonons(configuration, calculator, ..., options) Sqw4D
%
% iFunc/sqw_phonons: computes phonon 4D S(q,w) dispersions using the ASE.
% A model which computes phonon dispersions from the Hellmann-Feynman forces acting
% between atoms. The input argu... |
github | McStasMcXtrace/iFit-master | sqw_phonons_htmlreport.m | .m | iFit-master/Scripts/Models/Factory/private/sqw_phonons_htmlreport.m | 35,332 | utf_8 | b81daff31c3991be5178f7d24e0d46ce | function filename = sqw_phonons_htmlreport(filename, step, options, data)
% write an HTML report on a sqw_phonons computation
%
% sections:
% * calculator and system informations (from configuration, exported files, options)
% * optimisation status
% * on-going calculation status (when possible will write ETA)
% * stat... |
github | McStasMcXtrace/iFit-master | sqw_phonons_calc.m | .m | iFit-master/Scripts/Models/Factory/private/sqw_phonons_calc.m | 28,888 | utf_8 | d98c6cd2600acb02031b5e659e1f7604 | function [decl,calc,signal,options] = sqw_phonons_calc(options, status, calc_choice, read)
% sqw_phonons_calc: set python code to initiate the calculator
% requires: nothing except options, status(requirements), choice and
% output: python snippets to setup ASE Calculator, or signal=iFunc (QE case)
calc = ''; d... |
github | McStasMcXtrace/iFit-master | sqw_phonons_check.m | .m | iFit-master/Scripts/Models/Factory/private/sqw_phonons_check.m | 12,283 | utf_8 | 8bad075671248a3a4a1a408dbb028341 | function [options, result, read] = sqw_phonons_check(configuration, options, status)
% sqw_phonons_check: read the initial material structure
% requires: nothing except file/directory with material 'POSCAR' or other
% output: generates a script 'sqw_phonons_check.py' to generate ASE atoms.pkl
target = options.ta... |
github | McStasMcXtrace/iFit-master | inputdlg.m | .m | iFit-master/Scripts/Models/Factory/private/inputdlg.m | 18,263 | utf_8 | a36ad9271808c3bc1bceba50b9abfaf5 | function Answer =inputdlg(Prompt, Title, NumLines, DefAns, Resize)
%INPUTDLG Input dialog box (with non-modal support).
% ANSWER = INPUTDLG(PROMPT) creates a modal dialog box that returns user
% input for multiple prompts in the cell array ANSWER. PROMPT is a cell
% array containing the PROMPT strings.
%
% INPUTDLG... |
github | McStasMcXtrace/iFit-master | sqw_phonons_b_coh.m | .m | iFit-master/Scripts/Models/Factory/private/sqw_phonons_b_coh.m | 10,492 | utf_8 | 55a673842c8f1ac889d8a2ab4581cf85 | function [b_coh, b_inc,sigma_abs,element] = sqw_phonons_b_coh(chemical_elements)
% sqw_phonons_b_coh: return cross sections per elements
% input: cellstr or single char
% output:
% b_coh, b_inc: scattering length [fm]
% sigma_abs: absorption cross section [barn]
% element: atom symbols
persistent ele... |
github | McStasMcXtrace/iFit-master | sqw_phonons_requirements.m | .m | iFit-master/Scripts/Models/Factory/private/sqw_phonons_requirements.m | 8,671 | utf_8 | 9b04a636da991d6f0773531ba35da23e | function [status, link] = sqw_phonons_requirements(options)
% sqw_phonons_requirements: check for availability of ASE and MD codes
%
% MPI, EMT, GPAW, Abinit, Elk, QE, VASP
%
% returns a structure with a field for each MD software being 1 when available.
status = [];
% set-up a temporary directory for the tests
d = te... |
github | McStasMcXtrace/iFit-master | missing.m | .m | iFit-master/Scripts/Utility/missing.m | 1,006 | utf_8 | 30741c4b33d8f162b09c34590a79fc5b | function s = missing(obj1, obj2)
% MISSING Compare class methods.
% MISSING(obj1, obj2) compare methods from two classes and show differences.
s = [];
if ~nargin, return; end
if ischar(obj1), obj1 = feval(obj1); end
if nargin == 1
s=methods(obj1);
end
if ischar(obj2), obj2 = feval(obj2); end
... |
github | McStasMcXtrace/iFit-master | load_nmoldyn.m | .m | iFit-master/Scripts/Load/load_nmoldyn.m | 4,306 | utf_8 | 33c4a20a00ca35e7fb577ebc9fc794e2 | function a = load_nmoldyn(filename)
% function a=load_nmoldyn(filename)
%
% Returns an iData style dataset from an nMoldyn file
%
% Version: $Date$ $Version$ $Author$
% See also: iData/load, iLoad, save, iData/saveas
%
if ~isa(filename,'iData')
a = iData(iLoad(filename)); % no post-processing
else
a = filename;
... |
github | McStasMcXtrace/iFit-master | openendf.m | .m | iFit-master/Scripts/Load/openendf.m | 7,915 | utf_8 | 42f0c0912c61fcea70b69699e36e4185 | function out = openendf(filename)
%OPENENDF Open an Evaluated Nuclear Data File, display it
% and set the 'ans' variable to an iData object with its content
%
if ~isa(filename,'iData')
out = iData(iLoad(filename,'ENDF')); % no post-processing
else
out = filename;
end
clear filename;
if numel(out) > 1
%... |
github | McStasMcXtrace/iFit-master | opensim.m | .m | iFit-master/Scripts/Load/opensim.m | 12,683 | utf_8 | 34623a74bbc2fd6fcc5d1cadf7faf101 | function out = opensim(filename)
%OPENSIM Open a McStas SIM file, display it
% and set the 'ans' variable to an iData object with its content
%
if ~isa(filename,'iData')
out = iData(iLoad(filename,mfilename)); % no post-processing
else
out = filename;
end
clear filename;
if numel(out) > 1
% handle input... |
github | McStasMcXtrace/iFit-master | opencdf.m | .m | iFit-master/Scripts/Load/opencdf.m | 3,023 | utf_8 | 4f611992e7c0063af4bcc495d22588f1 | function out = opencdf(filename)
%OPENCDF Open a NetCDF file, display it
% and set the 'ans' variable to an iData object with its content
%
if ~isa(filename,'iData')
out = iData(filename,'NetCDF'); % with post-processing
return
else
out = filename;
end
clear filename;
if numel(out) > 1
% handle input... |
github | McStasMcXtrace/iFit-master | load_NeXus.m | .m | iFit-master/Scripts/Load/private/load_NeXus.m | 13,040 | utf_8 | d8e57f0a3b574f617f7d7bc7db0d953e | function out = load_NeXus(in)
% LOAD_NEXUS format an HDF file with NeXus structure (signal, axes, ...)
% See https://www.nexusformat.org/
%
% input:
% in: initial single HDF/NeXus data set loaded as a raw iData
% returns:
% out: NXdata and NXdetector blocks
%
% called by: openhdf
% The elemnets we wish to ident... |
github | McStasMcXtrace/iFit-master | read_analyze.m | .m | iFit-master/Libraries/Loaders/read_analyze.m | 15,893 | utf_8 | 7c1ba188a758f5164be07ad039890860 | function Analyze = read_analyze(filename)
% read_analyze Load Analyze hdr/img dataset from Mayo Clinic.
% Analyze = read_analyze(filename)
%
% Analyze is a struct with members:
% hdr - header information
% img - volume information
%
% Format definition from: https://en.wikipedia.org/wiki/Analyze_(imaging_so... |
github | McStasMcXtrace/iFit-master | read_compressed.m | .m | iFit-master/Libraries/Loaders/read_compressed.m | 8,266 | utf_8 | 3c01e74156a4029dc0f68329d693d2b5 | function s = read_compressed(filename, option, getpath)
% READ_COMPRESSED Read a compressed file (archive).
% Read a ZIP, TAR, GZIP, LZ4, ZSTD, BZIP2, XZ, LZO, ... file.
% You should install the extractors individually.
% Recommended:
% * LZ4 <https://lz4.github.io/lz4/> (2011). Extremely fast.
% * ZSTD <htt... |
github | McStasMcXtrace/iFit-master | read_mrc.m | .m | iFit-master/Libraries/Loaders/read_mrc.m | 19,211 | utf_8 | 3c7ff6018c18e9c076c9b6d2b06279af | function [Data] = read_mrc(file)
% read_mrc read a MRC/CCP4/MAP electronic density map file
% [Data] = read_mrc(file)
%
% Format definition:
% <http://en.wikipedia.org/wiki/MRC_%28file_format%29>
%
% Get EM data files at EMDB Data base <https://www.emdataresource.org/index.html>
%
% References:
% tom_mrcread... |
github | McStasMcXtrace/iFit-master | read_edf.m | .m | iFit-master/Libraries/Loaders/read_edf.m | 12,089 | utf_8 | 0f3c9edbe1c22f1c764f4d6cf229452b | function s = read_edf(filename)
% read_edf Read an ESRF Data Fornmat file (EDF)
% s = read_edf(filename)
%
% Only reads the first block/image
%
% Using: pmedf_read and pmedfwrite by Petr Mikulik, Masaryk University, Brno, 11.8.2010
% used in iLoad and iData/saveas, GPL
% <http://www.sci.muni.cz/~mikulik/Soft4Synchro... |
github | McStasMcXtrace/iFit-master | str2struct.m | .m | iFit-master/Libraries/Loaders/str2struct.m | 4,694 | utf_8 | bd04b93ce6f54245a22a15499bd5affc | function s=str2struct(string)
% s=str2struct(string) Create a structure from string lines
% This function creates a structure from string containing <name> <value> pairs
% Structure member must be separated by ';' or end-of-lines.
% The member assignation can be specified with spaces, '=' and ':'
% Values of ty... |
github | McStasMcXtrace/iFit-master | read_obj.m | .m | iFit-master/Libraries/Loaders/read_obj.m | 15,537 | utf_8 | ff383365bf24431803a39dd5610da7c3 | function data = read_obj(filename)
% read_obj Wrapper to read ascii OBJ
% data = read_obj(filename)
%
% References:
% read_wobj from D.Kroon University of Twente (June 2010)
% <http://www.mathworks.com/matlabcentral/fileexchange/27982-wavefront-obj-toolbox>
% BSD license
%
% See also: read_stl
data =... |
github | McStasMcXtrace/iFit-master | read_cdf.m | .m | iFit-master/Libraries/Loaders/read_cdf.m | 2,954 | utf_8 | b69c2facc511e4e00e4c475fa955ca72 | function s = read_cdf(filename)
% read_cdf Read a CDF file
% s = read_cdf(filename)
%
% http://en.wikipedia.org/wiki/Common_Data_Format
%
% See also: read_nc, read_hdf4, read_hdf5
s=[];
if nargin == 0 || any(strcmp(filename, {'identify','query','defaults'}))
CDF.name ='Common Data Format CDF (.cdf)';
... |
github | McStasMcXtrace/iFit-master | read_nc.m | .m | iFit-master/Libraries/Loaders/read_nc.m | 10,966 | utf_8 | 654d63eded2a3ce6c2cf5b344214f9b4 | function S = read_nc(File,varargin)
% read a NetCDF file, version 1 and 2
% S = read_nc(File)
%
% Fornat definition <https://en.wikipedia.org/wiki/NetCDF>
%
% references:
% tom_mrcread from Wolfgang Baumeister (TOM Matlab toolbox), 2008
% used to read MRC electron density map files
% <http://www.biochem.mpg.de/en/r... |
github | McStasMcXtrace/iFit-master | read_json.m | .m | iFit-master/Libraries/Loaders/read_json.m | 6,925 | utf_8 | 1edf98f2751d9a0c3ef899f59a4b65cf | function M=read_json(J)
% read_json Read a JSON file
% s = read_json(filename)
%
% Input: filename: JSON file (string)
% output: structure
% Example: y=read_json(fullfile(ifitpath, 'Data','iFit_iD115470.json')); isstruct(y)
%
% References:
% json4mat by Jonas Almeida, April 2010
% used for I/O with JSON f... |
github | McStasMcXtrace/iFit-master | read_endf.m | .m | iFit-master/Libraries/Loaders/read_endf.m | 31,469 | utf_8 | 24a654faf7097963b215c9fa4f928157 | function endf = read_endf(filename)
% data = read_endf(filename) import ENDF files
%
% import ENDF files, either using PyNE or slower/partial Matlab reader.
%
% Useful tokens for neutron scattering
% MF1/MT451 as 'info':
% ZA Standard material charge
% AWR Standard material mass
% AWI Mass of the projec... |
github | McStasMcXtrace/iFit-master | read_ace.m | .m | iFit-master/Libraries/Loaders/read_ace.m | 3,635 | utf_8 | 86bcab99794f9816eaa3f512c2a7dbba | function ace = read_ace(filename)
% data = read_ace(filename) Read MCNP/ACE file
%
% import MCNP/ACE files using PyNE
%
% Get ACE files from: http://www.cab.cnea.gov.ar/nyr/tsl_eng.html
%
%
%
% for MF7 MT4 from ACE
% lib = pyne.ace.Library('/home/farhi/Programs/MCNP/CAB-Sab/hwtr-293/hwtr-293.ace' )
% lib.read()
% s... |
github | McStasMcXtrace/iFit-master | read_varian.m | .m | iFit-master/Libraries/Loaders/read_varian.m | 11,648 | utf_8 | afe8718fff9e42290b120b877b78a139 | function data = read_varian(file)
% READ_VARIAN read a Varian NMR directory
% data = read_varian(file)
%
% the argument can be any file from the NMR data set directory
% which should contain a 'fid' and a 'procpar' file.
%
% Credits: DOSYToolbox, Copyright 2007-2008 <Mathias Nilsson>
% <http://dosytoolbox.chemist... |
github | McStasMcXtrace/iFit-master | read_hspy.m | .m | iFit-master/Libraries/Loaders/read_hspy.m | 9,219 | utf_8 | 091b66c59f7d1d7095b0dc1e2556465e | function s = read_hspy(filename)
% READ_HSPY Read an HypersPy HDF5 data set.
% See https://hyperspy.org/
s = [];
if nargin == 0 || any(strcmp(filename, {'identify','query','defaults'}))
hspy.name = 'HypersPy HDF5 data format';
hspy.method = mfilename;
hspy.extension ={'hspy'};
s = ... |
github | McStasMcXtrace/iFit-master | read_nii.m | .m | iFit-master/Libraries/Loaders/read_nii.m | 56,381 | utf_8 | 017f67ea07234f69efcb300e49567634 | function data = read_nii(filename)
% read a NifTi Neuroimaging Informatics Technology Initiative volume
% data = read_nii(filename)
%
% Format definition and consortium <http://nifti.nimh.nih.gov/>
%
% NifTi example data NII files at <https://nifti.nimh.nih.gov/nifti-1/data>
%
% references:
% http://www.mathworks.co... |
github | McStasMcXtrace/iFit-master | read_ply.m | .m | iFit-master/Libraries/Loaders/read_ply.m | 16,956 | utf_8 | 1d3092820e9364a42384a7f6293b6eae | function data = read_ply(filename, varargin)
% data=read_ply(filename, options, ...) Read PLY 3D stereo-lithography CAD data
%
% read_ply Read PLY 3D stereo-lithography CAD data
%
% Reference: PLY format at https://en.wikipedia.org/wiki/PLY_%28file_format%29
%
% Input: filename: PLY Data text file (string)
% output:... |
github | McStasMcXtrace/iFit-master | read_hdf4.m | .m | iFit-master/Libraries/Loaders/read_hdf4.m | 6,174 | utf_8 | 9d2da5dfa467dfe15477f39f36fa3b7f | function data = read_hdf4(filename)
% read_hdf4 Wrapper to hdfinfo/hdfread which reconstructs the HDF4 structure
% data = read_hdf4(filename)
%
% The returned structure has:
% data.<path>... the main branch holding the HDF4 data sets
% data.Attributes.<path> the sub-structure holding all attributes with simi... |
github | McStasMcXtrace/iFit-master | read_mccode.m | .m | iFit-master/Libraries/Loaders/read_mccode.m | 27,649 | utf_8 | 1ca5c9d585c784a88793a420cd433eeb | function data = read_mccode(filename)
% read_mccode load a McCode (McStas/McXtrace) simulation result
% data = read_mccode(filename)
%
% McCode gathers McStas (neutron scattering ray-tracing) http://www.mcstas.org
% McXtrace (x-ray scattering ray-tracing) http://www.mcxtrace.org
%
% This function impor... |
github | McStasMcXtrace/iFit-master | read_spe.m | .m | iFit-master/Libraries/Loaders/read_spe.m | 7,282 | utf_8 | cb832147809602c4a44d99a4218d2de3 | function s = read_spe(filename, varargin)
% data=read_spe(filename, options, ...) read a SPE (Roper x-ray CCD image or ISIS)
%
% read_spe read a SPE either from
% Roper Scientific / PI Acton CCD data files written by WinView
% or
% ISIS/SPE tof data
%
% References:
% May 9th 2008, Oliver Bunk: 1st version
% <h... |
github | McStasMcXtrace/iFit-master | read_sif.m | .m | iFit-master/Libraries/Loaders/read_sif.m | 14,115 | utf_8 | f3ad002fb9e3878d9b23fc82acd62c04 | % data=read_sif(filename) read a SIF x-ray CCD image
%
% imports Andor CCD data (iXon kinetic, Shamrock spectrograph, Newton).
%
% References:
% Marcel Leutenegger © November 2006
% Updated by Uli Klessinger 18 Jun 2012
% Todd Karin 2012
% http://www.andor.com/scientific-cameras
%
% Input: filename: SIF file... |
github | McStasMcXtrace/iFit-master | read_xyz.m | .m | iFit-master/Libraries/Loaders/read_xyz.m | 1,520 | utf_8 | 52570329c81e8a08e7c36334c1e3eb31 | % READ_XYZ read a Molecule XYZ file
%
% Usage: s = read_xyz(filename)
%
% References:
% https://en.wikipedia.org/wiki/XYZ_file_format
% http://www.mathworks.com/matlabcentral/fileexchange/18233-nanovis--molecular-visualizer
%
% See also: read_poscar, read_pdb, read_mrc, read_cif
function s = ... |
github | McStasMcXtrace/iFit-master | uigetfiles.m | .m | iFit-master/Libraries/Loaders/uigetfiles.m | 30,573 | utf_8 | 13294fb99c7949046aa8d65b518ec651 | function [filename, pathname] = uigetfiles(filterspec, title, varargin)
% UIGETFILES Multiple open file dialog box
% [filename, pathname] = uigetfiles(filterspec, title, 'option',value, ...)
% displays a dialog box for the user to fill in, and returns the
% filename and path strings. Multiple choices are possi... |
github | McStasMcXtrace/iFit-master | iLoad.m | .m | iFit-master/Libraries/Loaders/iLoad.m | 16,202 | utf_8 | faa99d41e55e2256550a076c7680763d | function [data, format] = iLoad(filename, loader, varargin)
% [data, loader] = iLoad(file, loader, ...) imports any data into Matlab.
%
% DESCRIPTION:
% ------------
% Imports any data into Matlab, returned as a structure or cell.
%
% Default supported formats include: any text based including CSV, Lotus1-2-3, SUN s... |
github | McStasMcXtrace/iFit-master | read_anytext.m | .m | iFit-master/Libraries/Loaders/read_anytext.m | 13,165 | utf_8 | ff7a624a9edcd39cae7499ea96ae29e9 | function s = read_anytext(varargin)
% read_anytext import any text using 'looktxt'.
% data = read_anytext(filename, options...)
%
% The possible options are:
%'--catenate' Catenates similar numerical fields (which have similar dimensions
% and names. Recommended.
%'--fast' When numerical data bl... |
github | McStasMcXtrace/iFit-master | read_igor.m | .m | iFit-master/Libraries/Loaders/read_igor.m | 25,932 | utf_8 | da100ffffdd075975f53922d88b264ad | function data = read_igor(filename)
% read_igor Load an Igor Wave dataset (IBW).
% data = read_igor(filename)
%
% References:
% Igor Pro file format (ibw) to matlab variable by Jakub Bialek (2013)
% used to read Igor pro Wave files, BSD license
% <http://www.mathworks.com/matlabcentral/fileexchange/42679-igor-pro-f... |
github | McStasMcXtrace/iFit-master | read_idl.m | .m | iFit-master/Libraries/Loaders/read_idl.m | 29,309 | utf_8 | 2164b25ffc7d9c4008645cbde5cf1d4f | function outargs=read_idl(varargin)
% READ_IDL restores variable from an IDL save file into Matlab
% variables.
%
% s=read_idl(filename)
%
% Input arguments (can appear in any order, and all are optional):
%
% - filename: complete path specification for the save file
% - 'lowercase': convert variable names from A... |
github | McStasMcXtrace/iFit-master | read_xml.m | .m | iFit-master/Libraries/Loaders/read_xml.m | 9,343 | utf_8 | 7e697572eddb92e5af5ac50003904312 | function s = read_xml( file )
% data=read_xml(filename) read XML file
%
% read_xml Wrapper to directly read XML files
%
% Input: filename: xml file (string)
% output: structure
% Example: y=read_xml(fullfile(ifitpath, 'Data','iFit_iD80908.xml')); isstruct(y)
%
%
% See also: read_json, read_yaml
if nargin == 0 ||... |
github | McStasMcXtrace/iFit-master | read_nrrd.m | .m | iFit-master/Libraries/Loaders/read_nrrd.m | 20,278 | utf_8 | 1fcaa003365b14f66b33804338082d00 | function frame = read_nrrd(filename)
% read_nrrd Read a NRRD Nearly Raw Raster Data file
%
% http://teem.sourceforge.net/nrrd/index.html
frame = [];
if nargin == 0 || any(strcmp(filename, {'identify','query','defaults'}))
nrrd.name ='NRRD Nearly Raw Raster Data';
nrrd.method =mfilename;
... |
github | McStasMcXtrace/iFit-master | read_tdms.m | .m | iFit-master/Libraries/Loaders/read_tdms.m | 75,526 | UNKNOWN | d0cab3d90ccb7e0c00f5a4fa5a4cb179 | function data=read_tdms(filename)
% read_tdms read a LabView TDMS file
% data=read_tdms(filename)
%
% References:
% http://www.mathworks.com/matlabcentral/fileexchange/30023-tdms-reader
% Jim Hokanson (2011) BSD
%
% Input: filename: LabView TDMS file (string)
% output: structure
% Example: y=read_tdms(... |
github | McStasMcXtrace/iFit-master | read_adsc.m | .m | iFit-master/Libraries/Loaders/read_adsc.m | 3,421 | utf_8 | 9b279b3651e2ee5221b5743f255f9700 | % data = read_adsc(filename) read an ADSC X-ray detector image
%
% Read an image file written by an ADSC detector.
% ADSC detectors write images in the "SMV" file format which consists of a text header and uncompressed image.
% ADSC_read takes the file 'fname' and returns the image information in 'imag' and text... |
github | McStasMcXtrace/iFit-master | read_inx.m | .m | iFit-master/Libraries/Loaders/read_inx.m | 3,582 | utf_8 | 6a477cdd825eddc482efb052570e4d47 | % READ_INX read the INX files -ILL standards
%
% Usage: s = read_inx(filename,{instrument})
%
%
% Option:
% instrument = 'in6', 'in5', 'in16', ..., default 'IN5'
% to make the difference between the 4-columns and 3-columns
% data ... |
github | McStasMcXtrace/iFit-master | read_fig.m | .m | iFit-master/Libraries/Loaders/read_fig.m | 4,468 | utf_8 | a00de02ec414feef38546baae99edda7 | function s = read_fig(filename)
% read_fig Wrapper to directly read Matlab Figures
% s = read_fig(filename)
%
% Input: filename: FIG filename or graphic handle
% output: structure
% Example: f=figure; h=surf(peaks); s=read_fig(h); close(f); isstruct(s)
%
%
% See also: read_idl, read_lvm, read_tdms, read_igor
s=[];
... |
github | McStasMcXtrace/iFit-master | read_bruker.m | .m | iFit-master/Libraries/Loaders/read_bruker.m | 33,560 | utf_8 | 62e51936601a36b53c70e9a2077eaaa6 | function data = read_bruker(file)
% read_bruker read a Bruker NMR data set
% the argument can be any file from the NMR data set directory
% which should contain
% a 'acqus', 'pdata/1' directory, 'fid' or 'ser'
%
% data = read_bruker(file)
% data = read_bruker(directory)
%
% Credits:
% DOSYToolbox, Copyrig... |
github | McStasMcXtrace/iFit-master | read_jeol.m | .m | iFit-master/Libraries/Loaders/read_jeol.m | 33,351 | utf_8 | 195617a8826199f9458082bed177c966 | function data = read_jeol(file)
% READ_JEOL read a Jeol NMR file
% the argument can be any file from the NMR data set directory
% which should contain
% a '.hdr' and '.bin' or '.asc' file.
% the '.hdr' file contains tokens 'x_sweep','x_freq','x_start','x_stop'
% OR a '.jdf' file
%
% Credits: DOSYToolb... |
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