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github
SMASHtoolbox/release-master
digread.m
.m
release-master/programs/THRIVE/private/digread.m
1,579
utf_8
6db078678ff1d5af5b616c2cc402f678
% digread : Read DIG binary files % % Usage: % [signal,time,info]=digread(filename); % % If the no input is specified, the user will be prompted for a file name % by a dialog box. The signal and its time base are stored as 1D arrays in % the first two outputs (respectively). Additional information is returned % as ...
github
SMASHtoolbox/release-master
softpad.m
.m
release-master/programs/THRIVE/private/softpad.m
1,479
utf_8
97f2b2ecc2bcc307888a5cc3f2835fd7
% softpad : signal padding with soft transitions to zero % % Given a 1D array, this function returns a zero padded array with a soft % boundary transitions. The transition extends over a specified fraction (5% by % default) of the input array size. The output array size is smallest power of % two sufficient to contai...
github
SMASHtoolbox/release-master
ReadEditBox.m
.m
release-master/programs/THRIVE/private/ReadEditBox.m
379
utf_8
cfe111f3c6188d2aeb9abe1a6471c456
% read edit box callback function data=ReadEditBox(src,varargin) entry=get(src,'String'); [data,count,err,next]=sscanf(entry,'%g',1); if isempty(data) % use stored value for failed read data=get(src,'UserData'); set(src,'String',num2str(data)); else % store new value for successful read entry=entry(1:(nex...
github
SMASHtoolbox/release-master
EllipseScreen.m
.m
release-master/programs/THRIVE/private/EllipseScreen.m
20,724
utf_8
6d124d890eec127d74329160a530e76b
function fig=EllipseScreen(oldfig) % allocate mising input if nargin<1 oldfig=''; end % create figure (if necessary) tag='THRIVE_EllipseScreen'; fig=findall(0,'Type','figure','Tag',tag); if isempty(fig) fig=createGUI('Tag',tag); end % determine how figure was called if isempty(oldfig) return end switch g...
github
SMASHtoolbox/release-master
QuadratureScreen.m
.m
release-master/programs/THRIVE/private/QuadratureScreen.m
15,069
utf_8
284adc49615a713496c62cd22d24901a
% this function needs to be significantly revised. Entry into the figure % should calculated Dx and Dy for both the characterization and experient % time ranges, as well as the fringe shift and intensity variation for the % experiment time range. The function currently known as % GenerateQuadrature should really just ...
github
SMASHtoolbox/release-master
busyfig.m
.m
release-master/programs/THRIVE/private/busyfig.m
929
utf_8
a75e427968dee33a2006443a0a5fc746
% busyfig : control a figure's busy state % % This function provides a "busy" state for use within a callback in situations % where a waitbar may not be appropriate. For example, a figure could be made % busy while data is loaded from a file to prevent further actions. When the % process is complete, the busy stat...
github
SMASHtoolbox/release-master
clean_legend.m
.m
release-master/programs/THRIVE/private/clean_legend.m
439
utf_8
d4cb242e585823acec8a495f27bb520f
% clean_legend : eliminates duplicate tag information in legend function varargout=clean_legend(varargin) [legend_h,object_h,plot_h,text_strings]=legend(varargin{:}); set(object_h,'Tag',''); % remove legend tags (avoids multiple tag issues) % handle output if nargout>0 varargout{1}=legend_h; end if nargout>1 ...
github
SMASHtoolbox/release-master
ColumnReader.m
.m
release-master/programs/THRIVE/private/ColumnReader.m
2,719
utf_8
69d30f890b11b414cd1dd8d0f44b305d
% ColumnReader : extract column data from a file % % This function extracts numerical data columns from a text file. Columns % are denoted by white space and/or delimeter characters (',', ';', and '&' % by default). A header containing any valid ASCII character may be % placed at the beginning of the file. The progr...
github
SMASHtoolbox/release-master
IterativeEllipseFit.m
.m
release-master/programs/THRIVE/private/IterativeEllipseFit.m
1,607
utf_8
68c7811104148203b54054d04077aa87
% IterativeEllipseFit : iterative ellipse fit with fixed parameter options % created 12/06/07 by Daniel Dolan function params=IterativeEllipseFit(D1,D2,D3,guess,fixed,options) % input check if nargin<4 error('At least four inputs are required'); end if nargin<5 fixed=[]; end if nargin<6 options=''; end ...
github
SMASHtoolbox/release-master
yokowfmread.m
.m
release-master/programs/THRIVE/private/yokowfmread.m
2,190
utf_8
2c6c8af0e08f191383bc39f2b33b246b
% yokowfmread : read binary data from a Yokogawa WFM file % % Usage: % [signal,time,info,header]=yokowfmread(filename); % % Most users will only care about the first two output arguments: the % signal waveform and time base. The third ouput contains an information % structure about the file, and the fourth output is ...
github
SMASHtoolbox/release-master
ResultsScreen.m
.m
release-master/programs/THRIVE/private/ResultsScreen.m
15,805
utf_8
901eeef41ceeb0cca7dde63ba32bf6e7
% ResultsScreen: % function fig=ResultsScreen(oldfig) % allocate mising input if nargin<1 oldfig=''; end % create figure (if necessary) tag='THRIVE_ResultsScreen'; fig=findall(0,'Type','figure','Tag',tag); if isempty(fig) fig=createGUI('Tag',tag); end % determine how figure was called if isempty(...
github
SMASHtoolbox/release-master
wfmread.m
.m
release-master/programs/THRIVE/private/wfmread.m
15,509
utf_8
f85b15b89fd918d02dc1aeed6f8642cd
% wfmread : Read Tektronix binary data files % % This function is an updated version of wfmread. The original version % (written by Daniel Dolan) supported the TDS XXX family of digitizers % (e.g., TDS 694). Tektronix has since released various TDS XXXX models % (e.g., TDS 5000), which use a different binary fil...
github
SMASHtoolbox/release-master
LoadScreen.m
.m
release-master/programs/THRIVE/private/LoadScreen.m
22,342
utf_8
645c99345029e67ad6446860b0d8e677
% LoadScreen: % function fig=LoadScreen(oldfig) % allocate mising input if nargin<1 oldfig=''; end % create figure (if necessary) tag='THRIVE_LoadScreen'; fig=findall(0,'Type','figure','Tag',tag); if isempty(fig) fig=createGUI('Tag',tag); end % call specific operations if isempty(oldfig) return end swit...
github
SMASHtoolbox/release-master
SelectFile.m
.m
release-master/programs/THRIVE/private/SelectFile.m
1,141
utf_8
ee363400cceb1ed7c91716451e66aff9
% select file callback (read from and write to target edit box) function SelectFile(src,eventdata,target,RWoption,FilterSpec,DialogTitle) % input check if (nargin<4) || isempty(RWoption) RWoption='read'; end if (nargin<5) || isempty(FilterSpec) FilterSpec={'*.*','All files'}; end if (nargin<6) || isempty(Dialo...
github
SMASHtoolbox/release-master
SmoothDerivative.m
.m
release-master/programs/THRIVE/private/SmoothDerivative.m
3,665
utf_8
943c7ef18e80bf8990f4e11a2d797f27
% SmoothDerivative : calculate a smooth derivative using the Savitzky-Golay % method. The derivative level may be specified by an array of positive % integers (including zero); the result for each array entry is returned as % a separate function output. The order and number of points used in the % calculation are spec...
github
SMASHtoolbox/release-master
MatchFigures.m
.m
release-master/programs/THRIVE/private/MatchFigures.m
296
utf_8
5a05ca596bb926944794bb97d70aaed2
% match the position of two figures function MatchFigures(old,new) % probe old figure size (pixels) units=get(old,'Units'); set(old,'Units','pixels'); pos=get(old,'Position'); set(old,'Units',units); % set new figure size (pixels) units=get(new,'Units'); set(new,'Position',pos,'Units',units);
github
SMASHtoolbox/release-master
local_graphic.m
.m
release-master/programs/THRIVE/private/local_graphic.m
47,988
utf_8
6057317245c67185aa419e3493142a84
% local_graphic : local graphics for MinimalFigure function cdata=local_graphic(name) switch name case 'AutoScaleIcon' cdata(:,:,1) = [ ... NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN ; ... NaN 255 255 255 255 255 255 255 255 255 255 255 255 255 255 NaN ; ... ...
github
SMASHtoolbox/release-master
MinimalFigure.m
.m
release-master/programs/THRIVE/private/MinimalFigure.m
39,719
utf_8
dc544409e3f6d4139086822d9b6e9ffe
% MinimalFigure: create a minimalistic figure useful for GUIs % % This function creates a MATLAB non-dockable, menu-less figure with a % custom toolbar. Aside from these customizations, all standard figure % features can be specified as inputs: % MinimalFigure('Units','pixels','Position',[0 0 600 480]); % example % o...
github
SMASHtoolbox/release-master
QuadratureScreen.m
.m
release-master/programs/THRIVE/private/old/QuadratureScreen.m
13,753
utf_8
89ffb5bc68b41f4d5bba8d1d2bc8c94f
% QuadratureScreen: % function fig=QuadratureScreen(oldfig) % allocate mising input if nargin<1 oldfig=''; end % create figure (if necessary) tag='THRIVE_QuadratureScreen'; fig=findall(0,'Type','figure','Tag',tag); if isempty(fig) fig=createGUI('Tag',tag); end % determine how figure was called if isempty(o...
github
SMASHtoolbox/release-master
FTderiv.m
.m
release-master/programs/THRIVE/private/old/FTderiv.m
772
utf_8
34ba0e4a8b5ecd2d595c7557cc7c1a87
function [dxdt,x]=FTderiv(x,tau,T) % soft padding N=numel(x); x=softpad(x); N2=numel(x); % perform FFT xt=fft(x); mpos=0:(N2/2); mneg=(N2/2-1):-1:1; m=[mpos -mneg]; omega=2*pi*m/(N2*T); % apply derivative transfer [H,Z]=DerivativeTransfer(omega,tau); x=ifft(xt.*Z,N2); dxdt=ifft(xt.*H,N2); % elimate padded points x=...
github
SMASHtoolbox/release-master
wfmread.m
.m
release-master/programs/THRIVE/private/old/wfmread.m
15,207
utf_8
c399b4817fd3900428ba2c9c8529eb44
% wfmread : Read Tektronix binary data files % % This function is an updated version of wfmread. The original version % (written by Daniel Dolan) supported the TDS XXX family of digitizers % (e.g., TDS 694). Tektronix has since released various TDS XXXX models % (e.g., TDS 5000), which use a different binary fil...
github
SMASHtoolbox/release-master
extractFile.m
.m
release-master/+SMASH/+FileAccess/extractFile.m
138
utf_8
b46966deb634bb1f5fec608459b58bc9
% UNDER CONSTRUCTION % function extractFile(archive,varargin) object=SMASH.FileAccess.SDAfile(archive); export(object,varargin{:}); end
github
SMASHtoolbox/release-master
probeFile.m
.m
release-master/+SMASH/+FileAccess/probeFile.m
2,308
utf_8
ce7fec809b968a48ee267cd4514ef4ca
% PROBEFILE Reveal contents of a multi-record file % % This function reveals the contents of multi-record files. % >> probefile(filename,format); % The following formats can be used specified when a file is probed. % -'agilent' and 'keysight' % -'zdas' and 'saturn' % -'pff' and 'sda' % -'column' %...
github
SMASHtoolbox/release-master
ZDAS.m
.m
release-master/+SMASH/+FileAccess/ZDAS.m
2,549
utf_8
6a1d85c30cf11a2f9284c92ae34f6eee
% %% function varargout=ZDAS(varargin) %% handle input assert((nargin>0),'ERROR: invalid number of inputs'); if ischar(varargin{1}) local=varargin{1}; assert(exist(local,'dir'),'ERROR: invalid local directory'); network=''; if (nargin==2) && ischar(varargin{2}) network=varargin{2}; ...
github
SMASHtoolbox/release-master
sda2workspace.m
.m
release-master/+SMASH/+FileAccess/sda2workspace.m
3,031
utf_8
1ad166d10cf29210ff5995b01a555590
% sda2workspace Load archive into the current workspace % % This function loads records from an archive file (*.sda) into the current % workspace. The archive can be specified manually: % sda2workspace(file); % or selected interactively. % sda2workspace(); % Each variable is named after the record it's create fr...
github
SMASHtoolbox/release-master
SupportedFormats.m
.m
release-master/+SMASH/+FileAccess/SupportedFormats.m
4,206
utf_8
c47500476f8da853cb4e8d660a9c81f2
% SMASH supports many file formats. Some of these formats are associated % with a specific file type and extension, while others cover mutiple file % types and/or extensions. Specific associations, where they exist, are % noted below. % % Text formats: % 'block' : Numeric data blocks stored in columns, sep...
github
SMASHtoolbox/release-master
verifyFormat.m
.m
release-master/+SMASH/+FileAccess/verifyFormat.m
986
utf_8
9961c75d32df7726586b746d2e225ae0
% verifyFormat Verify file format % % This function determines if a requested format name is supported by the % FileAccess package. % verifyFormat(name); % result printed in the command window % valid=verifyFormat(name); % logical result returned % The input "name" must be a character array. % % See also SMASH.Fi...
github
SMASHtoolbox/release-master
renameFiles.m
.m
release-master/+SMASH/+FileAccess/renameFiles.m
1,893
utf_8
ab5817ecbf10ce08ff6ed9f3d66bb122
% renameFiles Mapped file renaming % % This function renames a group of files using a map file. % renameFiles(location,map); % The input "location" indicates the directory where the files are located. % The default location is the current directory. % % The input "map" is the name of a text file containing "old >>...
github
SMASHtoolbox/release-master
readFile.m
.m
release-master/+SMASH/+FileAccess/readFile.m
4,634
utf_8
f51c95e50ae06515722c651e00ad60d3
% READFILE Read from a text or binary file % % This function reads various text and binary file formats. To read from a % specific file, use the command: % >> data=readFile(filename,[format],[record]); % The second and third inputs are optional in many situations. % -"format" should be specified if the file's ext...
github
SMASHtoolbox/release-master
mergeSplits.m
.m
release-master/+SMASH/+FileAccess/mergeSplits.m
2,244
utf_8
0589f85afaeaf4a8ae3b02743cdf5118
% mergeSplits Restore complete file from a set of split SDA files % % This function merges a set of split SDA files into a complete file. All % split files must be available, but only one name needs to be passed to % this function. For example, suppose the original file "mydata" was split % into "mydata_file1.sda" a...
github
SMASHtoolbox/release-master
sda2mat.m
.m
release-master/+SMASH/+FileAccess/sda2mat.m
1,517
utf_8
9ddbadd0450b79ba2630e170d5f720ae
% sda2mat Convert archive to a MAT file % % This function converts an archive (*.sda file) to a *.mat file, % which is compatible with MATLAB's load command. % sda2mat(archive,matfile) % The user is prompted to select omitted and/or empty file names % % See also SMASH.FileAccess, mat2sda % % % created November 20,...
github
SMASHtoolbox/release-master
mat2sda.m
.m
release-master/+SMASH/+FileAccess/mat2sda.m
1,548
utf_8
4cf0b39086976ba55aa36a0eda711d76
% mat2sda Convert MAT file to an archive % % This function converts a MAT file (created with MATLAB's save command) to % a *.sda archive. % mat2sda(matfile,archive) % The user is prompted to select ommitted and/or empty file names. % % See also SMASH.FileAccess, sda2mat % % % created November 20, 2016 by Daniel Do...
github
SMASHtoolbox/release-master
archiveFile.m
.m
release-master/+SMASH/+FileAccess/archiveFile.m
185
utf_8
93f4503a667301e4d89fae56f045290f
% archiveFile Import data file into an archive % % UNDER CONSTRUCTION function archiveFile(archive,varargin) object=SMASH.FileAccess.SDAfile(archive); import(object,varargin{:}); end
github
SMASHtoolbox/release-master
splitFile.m
.m
release-master/+SMASH/+FileAccess/splitFile.m
3,191
utf_8
213a24a2e1705438597927fb328b7383
% splitFile Split a file into a set of SDA files % % This function divides a file into set of SDA files. It is intended for % data transmission with maximum file size limits (such as email). To % split a file, type the following command. % >> splitFile(original,bytes); % The first input specifies the original file...
github
SMASHtoolbox/release-master
writeFile.m
.m
release-master/+SMASH/+FileAccess/writeFile.m
3,142
utf_8
a62a3a8fa92b5b41558be5f7ed15e05f
% WRITEFILE Write data to a file % % This method writes data from MATLAB to a file in 'column', 'dig', or % 'sda' format based on the specified file extension. Any extension other % than *.dig or *.sda uses the 'column' or 'block format based on the % input "table" (numeric matrix or cell array of numeric matrices, % ...
github
SMASHtoolbox/release-master
workspace2sda.m
.m
release-master/+SMASH/+FileAccess/workspace2sda.m
2,511
utf_8
bca04cc93b975fc1a8eceb1e04bddcab
% workspace2sda Save the current workspace to an archive % % This function saves all variables in the current workspace to an archive % file (*.sda). The archive can be specified manually: % workspace2sda(file); % or selected interactively. % workspace2sda(); % Each variable is stored as a record with the same n...
github
SMASHtoolbox/release-master
determineFormat.m
.m
release-master/+SMASH/+FileAccess/determineFormat.m
1,394
utf_8
faee551e2e61fa8b5f18e63d0d24a1f5
% determineFormat Determine file format % % This function determines the format of a file as automatically as % possible. The file's extension is used if there is an clear match % to a supported format. Format matching can be restricted to a subset of % supported formats to minimize ambiguity. If a clear match is no...
github
SMASHtoolbox/release-master
probeDAS.m
.m
release-master/+SMASH/+FileAccess/DAS/probeDAS.m
418
utf_8
9749f5fb3fe5c42dcdec37eea2dd7f71
% probeDAS % % >> names=probeDAS(shot,style); % % See also readDAS % function data=probeDAS(shot,style) % handle input assert(nargin==2,'ERROR: invalid number of inputs') target=DASfile(shot,style); switch lower(style) case {'s','saturn'} object=SMASH.FileAccess.DigitizerFile(target,'saturn'); ot...
github
SMASHtoolbox/release-master
readDAS.m
.m
release-master/+SMASH/+FileAccess/DAS/readDAS.m
2,347
utf_8
0c7077468e4bed053111a545978a49d5
% readDAS Read from a local/network DAS archive % % This function reads data acquisition system (DAS) archives stored locally % or on a network drive. These archives are collection of *.hdf files, % each labeled by experiment number. Four archive styles are currently % supported: % -'c' or 'cmdas' : standard Z a...
github
SMASHtoolbox/release-master
read.m
.m
release-master/+SMASH/+FileAccess/@ColumnFile/read.m
814
utf_8
922c0cfadc607cbf343507fba56cbaec
% READ Read from a ColumnFile object % % >> output=read(object,[delim],[mincol]); % The output is a structure with the following fields. % -FileName % -FileType % -Header % -Data % % see also ColumnFile, probe % function output=read(object,delim,mincol) % handle input if nargin<2 delim=[]; end if ...
github
SMASHtoolbox/release-master
probe.m
.m
release-master/+SMASH/+FileAccess/@ColumnFile/probe.m
1,736
utf_8
3f9508e6cf4f13eb209f9b5ea642a85c
% PROBE Probe the file associated with a ColumnFile object % % Syntax: % >> output=probe(object,[delim],[mincol]); % The output is a structure with the following fields. % -HeaderLines % -NumberColumns % -Format % % See also ColumnFile, read, write % function varargout=probe(object,delim,mincol) if isemp...
github
SMASHtoolbox/release-master
write.m
.m
release-master/+SMASH/+FileAccess/@ColumnFile/write.m
1,116
utf_8
d94a13cf4c98b1e281b93a1027cfd34f
% WRITE Write to a ColumnText object % % Syntax: % >> success=write(object,data,[format],[header]); % The output is a logical flag indicating if the write was successful % (true). % % see also ColumnFile % % function success=write(object,data,format,header) if exist(object.FullName,'file') message{1}='Target f...
github
SMASHtoolbox/release-master
select.m
.m
release-master/+SMASH/+FileAccess/@ColumnFile/old/select.m
581
utf_8
10db5f36c79ab6daed6513e51acbf6b4
% SELECT Select file for ColumnFile object % % This methods selects the file accessed by a ColumnFile object. The file % name can be specified directly: % >> object=select(object,filename); % or interactively. % >> object=select(object); % user will be prompted to select a file % % See also ColumnFile, probe, re...
github
SMASHtoolbox/release-master
append.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/append.m
216
utf_8
a743337396c72988c0cb4470fcee9438
% UNDER CONSTRUCTION % % created November 23, 2016 by Daniel Dolan (Sandia National Laboratories) % function append(object,label,dimension,data) try info=h5info(object.ArchiveFile,dataset); catch end end
github
SMASHtoolbox/release-master
select.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/select.m
2,566
utf_8
e9a0a8236fd6de8e22fb00a076d8d520
% select Select record from an archive % % This method allows users to browse and select a record from an archive % file. % >> choice=select(archive,[pattern],[reference]); % A dialog box lists the label, type, and description for % records found in the archive. Record choice can be restricted with an % optional t...
github
SMASHtoolbox/release-master
import.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/import.m
1,267
utf_8
82987e1fec29000b0a584db787a83896
% import Import file into archive % % This method imports an external file into an archive file. The imported % file is automatically labelled by name. An optional description and % deflate level can be specified. % >> import(object,filename,[description],[deflate]); % % See also SDAfile, export, insert, probe, sel...
github
SMASHtoolbox/release-master
probe.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/probe.m
2,541
utf_8
920a01e5fd6201d2e5816022f775fa6f
% probe Probe archive file % % This method probes the state and contents of an archive file. When % called without outputs: % >> probe(archive); % the function prints the state and contents to the command window. % Specific values are returned as outputs. % >> [label,type,description,status]=probe(object); % % T...
github
SMASHtoolbox/release-master
remove.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/remove.m
1,964
utf_8
8b9349b34d8073ea8ec7846707f08d62
% remove Remove record from an archive % % This method removes one or more records from an archive file. % >> remove(archive,label1,label2,...); % CAUTION: record removal can be slow (depending on the remaining archive % contents) and is irreversible! % % See also SDAfile, probe % % % created October 9, 2014 by Dan...
github
SMASHtoolbox/release-master
describe.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/describe.m
1,041
utf_8
85324f91d1647274b39327aa1ceccc6d
% desribe Revise record description % % This method changes the description associated with an archive record. % >> describe(archive,label,description); % Descriptions are helpful for clarifying the contents of tersely labelled % records. % % See also SDAfile, probe, select % % % created October 9, 2014 by Daniel Do...
github
SMASHtoolbox/release-master
replace.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/replace.m
1,370
utf_8
21c89e8283506bb7f7f6381ba36ec3ed
% replace Replace record data % % This method replaces data in an existing record with a new dataset of the % same type and size. % replace(archive,label,new); % NOTE: only numeric, logical, and character records can be replaced! % % See also SDAfile, append, insert % % % created November 23, 2016 by Daniel Dolan ...
github
SMASHtoolbox/release-master
copy.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/copy.m
1,431
utf_8
a047285d50ebf6f9d57e509cb80a463a
% copy Copy records between archives % % This method copies records from the current archive to another archive. % copy(object,destination,label); % The input "destination" must be a valid SDA file; that file will be % created if it does not already exist. % % See also SDAfile % % % created May 6, 2019 by Daniel Do...
github
SMASHtoolbox/release-master
extract.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/extract.m
2,267
utf_8
3c903ef96a625c3c4bbaf14f572ac696
% extract Extract data from an archive % % This method extracts data from an archive file to a MATLAB variable. The % variable is selected by text label. % >> data=extract(archive,label); % % See also SDAfile, export, import, probe, select % % created October 9, 2014 by Daniel Dolan (Sandia National Labs) % -re...
github
SMASHtoolbox/release-master
insert.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/insert.m
3,863
utf_8
393f15f77cbf8b1e0304d3e6f1a1371e
% insert Insert data into an archive % % This method inserts a data contained in a MATLAB variable into an archive % file. The variable is stored with a unique text label for identification % and access. The following variable types are supported. % -numeric arrays (double, single, uint8, ...) % -logical arrays...
github
SMASHtoolbox/release-master
export.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/export.m
811
utf_8
7740f397f81ff4bff55488644853dc30
% export Export data from archive to file % % This method exports files stored in archive file to an external file. % >> export(object,filename,[new]); % The optional third input "new" exports the stored file to a new name in % the same directory as the archive file. If omited, exported files use % the same name as ...
github
SMASHtoolbox/release-master
readAttribute.m
.m
release-master/+SMASH/+FileAccess/@SDAfile/private/readAttribute.m
791
utf_8
e637416ce74a878ed058fc77ad4dae6b
% readAttribute Read HDF5 attribute % % This function reads attributes from a HDF5 file. Most of the work is % handled by MATLAB's h5readatt function, with additional handling of % string attributes that may be returned as cell arrays. % % % created March 2, 2017 by Daniel Dolan (Sandia National Laboratories) % funct...
github
SMASHtoolbox/release-master
read.m
.m
release-master/+SMASH/+FileAccess/@BlockFile/read.m
937
utf_8
73b7a33a10b03a14d0cf4277d4d79106
% READ Read from a column block file % % >> output=read(object,[delim],[mincol]); % The output is a structure with the following fields. % -FileName % -FileType % -Header % -Data % % see also BlockFile, probe % function output=read(object,delim,mincol) % handle input if nargin<2 delim=[]; end if n...
github
SMASHtoolbox/release-master
probe.m
.m
release-master/+SMASH/+FileAccess/@BlockFile/probe.m
1,983
utf_8
5c5c406210475a4475a6ea42eb128d80
% PROBE Probe the column block file % % Syntax: % >> output=probe(object,[delim],[mincol]); % The output is a structure with the following fields. % -HeaderLines % -NumberColumns % -Format % % See also BlockFile, read, write % function varargout=probe(object,delim,mincol) if isempty(object.FileName) ...
github
SMASHtoolbox/release-master
write.m
.m
release-master/+SMASH/+FileAccess/@BlockFile/write.m
2,137
utf_8
cdcf91df7f67fac8bf493a7cbec07c91
% WRITE Write to a BlockFile object % % Syntax: % >> success=write(object,data,[format],[header]); % The output is a logical flag indicating if the write was successful % (true). % % see also BlockFile % % function success=write(object,data,format,header) if exist(object.FullName,'file') message{1}='Target fil...
github
SMASHtoolbox/release-master
select.m
.m
release-master/+SMASH/+FileAccess/@BlockFile/old/select.m
581
utf_8
10db5f36c79ab6daed6513e51acbf6b4
% SELECT Select file for ColumnFile object % % This methods selects the file accessed by a ColumnFile object. The file % name can be specified directly: % >> object=select(object,filename); % or interactively. % >> object=select(object); % user will be prompted to select a file % % See also ColumnFile, probe, re...
github
SMASHtoolbox/release-master
read.m
.m
release-master/+SMASH/+FileAccess/@PFFfile/read.m
2,124
utf_8
bfaed16eb0beddf74eee75c0596a2021
% read Read PFF dataset % % This method reads a dataset from a PFF file. % >> output=read(object,[dataset]); % The optional input "dataset" is an integer specifying which dataset will % read (default is 1). The output is a structure that depends on the % dataset type. % % See also PFFfile, probe, select, write % % ...
github
SMASHtoolbox/release-master
probe.m
.m
release-master/+SMASH/+FileAccess/@PFFfile/probe.m
3,173
utf_8
2450d80f02430acf3675f1f6e6306c76
% probe Reveal PFF datasets % % This method determines the datasets inside a PFF file. The results can % be returned at the command line: % >> probe(object) % or in a graphical window. % >> probe(object,'gui'); % Calling the function with an output returns the contents as a structure. % >> dataset=probe(obje...
github
SMASHtoolbox/release-master
write.m
.m
release-master/+SMASH/+FileAccess/@PFFfile/write.m
6,248
utf_8
ff81edfcb315c9fcab30c9cdf67b5705
% write Write PFF data % % This method writes data to a PFF file as a PFTNGD dataset. % >> write(object,data); % The input "data" must be a MATLAB structure with the following fields. % "Grid" : cell array of M 1-D arrays (required) % "Vector" : cell array of N M-D arrays (required) % "GridL...
github
SMASHtoolbox/release-master
write.m
.m
release-master/+SMASH/+FileAccess/@PFFfile/old/write.m
3,280
utf_8
9df5f958033515b76535723d5cedbd04
% write Write data to a PFF object % % >> write(object,data); % UNDER CONSTRUCTION! % % See also PFFfile % % % % function write(object,data,mode) % manage input assert(nargin>=2,'ERROR: insufficient input'); assert(isstruct(data) && (numel(data)==1),... 'ERROR: data must be passed in an individual structure'...
github
SMASHtoolbox/release-master
read.m
.m
release-master/+SMASH/+FileAccess/@ImageFile/read.m
2,405
utf_8
b9f61b3fec4a6977385c4cb26f2f7ed5
% READ Read file associated with a ImageFile object % % Syntax: % >> output=read(object,[option]); % The option input is used for formats files containing more than one % image. The output is a structure with the following fields. % -FileName % -FileType % -FileOption % -Grid1 % -Grid2 % -Data % %...
github
SMASHtoolbox/release-master
select.m
.m
release-master/+SMASH/+FileAccess/@ImageFile/select.m
3,210
utf_8
1209a8cd820038c43ff5603ad54f54ab
% SELECT Select file associated with an ImageFile object % % Syntax: % >> object=select(object,[filename],[format]); % % See also ImageFile, read % function object=select(object,filename,format) if nargin<2 filename=''; end if nargin<3 format=''; end object=select@SMASH.FileAccess.File(object,filename); ...
github
SMASHtoolbox/release-master
read_film.m
.m
release-master/+SMASH/+FileAccess/@ImageFile/private/read_film.m
6,613
utf_8
85f584c0b34d5dff9658c54f69455138
function [data,grid1,grid2,record,info]=read_film(name,record) if nargin<2 record=[]; end [pathname,filename,ext]=fileparts(name); switch lower(ext) case '.img' if strcmp(ext,'.img') headerfile=fullfile(pathname,[filename '.hdr']); else headerfile=fullfile...
github
SMASHtoolbox/release-master
read_winspec.m
.m
release-master/+SMASH/+FileAccess/@ImageFile/private/read_winspec.m
1,164
utf_8
7d29855e0067ea31473c941d3232b9fb
function [func,info]=read_winspec(filename) if (nargin<1) || isempty(filename) choices{1,1}='*.spe;*.SPE'; choices{1,2}='WinSpec files (*.spe)'; choices{2,1}='*.*'; choices{2,2}='All files (*.*)'; [filename,pathname]=uigetfile(choices,'Select data file'); filename=fullfile(pathname,fi...
github
SMASHtoolbox/release-master
read_optronis.m
.m
release-master/+SMASH/+FileAccess/@ImageFile/private/read_optronis.m
1,724
utf_8
505f683ab078484850a98316c12d0141
% revised May 28, 2014 by Daniel Dolan % -Automatically remove periods from field names % function [data,config,header]=read_optronis(filename) if (nargin<1) || isempty(filename) [fname,pname]=uigetfile('*.imd;*.IMD','Select Optronis IMD file'); filename=[pname fname]; end % open and read IMD file fid=fope...
github
SMASHtoolbox/release-master
read_sbfp.m
.m
release-master/+SMASH/+FileAccess/@ImageFile/private/read_sbfp.m
9,398
utf_8
73f028d3faf3b07ed358d4dc7246504c
function varargout=read_sbfp(filename) varargout=cell(nargout,1); if (nargin<1) || isempty(filename) [fname,pname]=uigetfile({'*.img';'*.IMG'},'Select image file'); if isnumeric(fname) % user pressed cancel return end filename=fullfile(pname,fname); end [array,header]=read_SBF_img(filename); ...
github
SMASHtoolbox/release-master
read_fujiIMG.m
.m
release-master/+SMASH/+FileAccess/@ImageFile/private/read_fujiIMG.m
2,671
utf_8
6db42de737039dbda4114c5c39564369
% imgread : read IMG file created by a Fuji image plate scanner % % Usage: % >> [data,info]=imgfujiread(file); % This procedure reads a FUJI format file for the image plate (IP) data and % outputs a PSL (Photo-Stimulable Luminenscence) dose equivelent file. % The data for the conversion and the image paramet...
github
SMASHtoolbox/release-master
read.m
.m
release-master/+SMASH/+FileAccess/@ParameterFile/read.m
2,318
utf_8
78ee0ce925b0a451691f5a5e9a6e2701
% read Read parameter file % % This method reads a parameter file into a structure. % data=read(object); % The output "data" has structure fields for each parameter set defined in % the file; repeated set names are stored as structure arrays. % % See also ParameterFile, write % % % created May 10, 2018 by Daniel Do...
github
SMASHtoolbox/release-master
show.m
.m
release-master/+SMASH/+FileAccess/@ParameterFile/show.m
332
utf_8
c79ee9e465838c880dd522e2f060162f
% show Show parameter file % % This method shows a parameter file in the command window. % show(object); % % See also ParameterFile, edit % % % created May 10, 2018 by Daniel Dolan (Sandia National Laboratory) % function show(object) current=pwd; CU=onCleanup(@() cd(current)); cd(object.PathName); type(object.Fil...
github
SMASHtoolbox/release-master
edit.m
.m
release-master/+SMASH/+FileAccess/@ParameterFile/edit.m
330
utf_8
b12a0be47d5c0f955e2542f699898be3
% edit Edit parameter file % % This method opens a parameter file in the MATLAB editor % edit(object); % % See also ParameterFile, show % % % created May 10, 2018 by Daniel Dolan (Sandia National Laboratory) % function edit(object) current=pwd; CU=onCleanup(@() cd(current)); cd(object.PathName); edit(object.FileN...
github
SMASHtoolbox/release-master
write.m
.m
release-master/+SMASH/+FileAccess/@ParameterFile/write.m
53
utf_8
42f80ab4dc16e4060a152834b2df2f2b
% UNDER CONSTRUCTION function write(object,data) end
github
SMASHtoolbox/release-master
read.m
.m
release-master/+SMASH/+FileAccess/@DIGfile/read.m
524
utf_8
931d7d06678eb690ce0a17ed0715a677
% READ Read file associated with a DIGfile object % % Syntax: % >> output=read(object); % The output is a structure with the following fields. % -FileName % -Time % -Signal % % See also DIGfile, write % function output=read(object) % error checking assert(exist(object.FullName,'file')==2,... 'ERROR: c...
github
SMASHtoolbox/release-master
write.m
.m
release-master/+SMASH/+FileAccess/@DIGfile/write.m
630
utf_8
c25bb05e5f8dc0b162533ab7a2a5425a
% WRITE Write file associated with a DIGfile object % % Syntax: % >> success=write(object,time,signal); % % % This method writes information to the file associated with a Digitizer % object. % % % see also Digitizer, probe, read function write(object,time,signal) if exist(object.FullName,'file') message{1}='...
github
SMASHtoolbox/release-master
determineFormat.m
.m
release-master/+SMASH/+FileAccess/private/determineFormat.m
8,002
utf_8
985c80ab74dccde7b8a59b7b43dcd496
% determineFormat Determine file format % % This function determines the format of a file as automatically as % possible. The file's extension is used if there is an clear match % to a supported format. Format matching can be restricted to a subset of % supported formats to minimize ambiguity. If a clear match is no...
github
SMASHtoolbox/release-master
probe.m
.m
release-master/+SMASH/+FileAccess/@PDFfile/probe.m
1,083
utf_8
a78508fcf0474f682f0d91fad15a5458
% probe Probe file % % This method probes the PDF file's metadata. % report=probe(object); % The output "report" is a structure describing the number of pages, % encryption status, format version, and so forth. Empty report fields % indicate information not defined in the file. % % See also PDFfile % function repor...
github
SMASHtoolbox/release-master
readPage.m
.m
release-master/+SMASH/+FileAccess/@PDFfile/readPage.m
1,575
utf_8
2bf2ab5aac6095df5575e3abe8ba2eaa
% readPage Read page image % % This method reads a page image from a PDF file. % readPage(object); % The first page is read by default at a resolution of 300 dots per inch. % Other pages and resolutions can also be specified. % readPage(object,page,DPI); % The input "page" is an integer matching any valid page ...
github
SMASHtoolbox/release-master
generate.m
.m
release-master/+SMASH/+FileAccess/@PDFfile/generate.m
4,824
utf_8
f2073bce9b8ceb4538033ec69faaddd8
% generate Generate PDF file % % This *static* method generates a PDF file from an existing figure. % PDFfile.generate(file,name,value,...); % The mandatory input "file" indicates the PDF file name. Optional % name/value pairs define file settings. % -'Figure' controls which figure is used (default is current fi...
github
SMASHtoolbox/release-master
readText.m
.m
release-master/+SMASH/+FileAccess/@PDFfile/readText.m
621
utf_8
cb6c14905e9b46bfd71a11001ebb8249
% readText Read text data % % This method reads all text data from a PDF file. % data=readText(object); % The output "data" is a character array. % % NOTE: text layout strongly depends on file construction! Extracted text % may have different white spacing and line structure than the file shows in % a PDF viewer...
github
SMASHtoolbox/release-master
read.m
.m
release-master/+SMASH/+FileAccess/@LUNA/read.m
1,624
utf_8
33ef0f5df2b6bc76440e7dfb32b53fe8
% read Read LUNA scan from a file % % This file reads LUNA scans from a file. % >> object=read(object,filename,[record]); % A read operation is performed automatically at object creation. % function object=read(object,filename,record) % manage input if (nargin<2) || isempty(filename) [filename,pathname]=uiget...
github
SMASHtoolbox/release-master
modify.m
.m
release-master/+SMASH/+FileAccess/@LUNA/modify.m
2,437
utf_8
8a2448c62b24c5344cf266c78a91aa95
% modify Modify time axes of scan % % This method modifies the time axes of a LUNA scan. The time step between % points and the total time range are specified as follows. % >> object=modify(object,step,[tmin max]); % Empty and omitted inputs allow particular settings to remain fixed. % >> object=modify(object,...
github
SMASHtoolbox/release-master
explore.m
.m
release-master/+SMASH/+FileAccess/@LUNA/explore.m
14,502
utf_8
8c85a9a6479b8420efb4e3f26dd94b01
% explore Explore scan % % This method provides interactive exploration of a LUNA scan % explore(object); % % See also LUNA % % % created March 9, 2020 by Daniel Dolan (Sandia National Laboratories) % function varargout=explore(object) assert(exist('xline','file') == 2,... 'ERROR: this method requires MATLAB 2...
github
SMASHtoolbox/release-master
locate.m
.m
release-master/+SMASH/+FileAccess/@LUNA/locate.m
1,976
utf_8
03d53f312f416983f6413fafc72bc426
% locate Locate scan peak % % This method locates peaks in a LUNA scan using a finite time width. % [time,RL]=locate(object,width); % The "time" output is the integration center of maximum area for the % specified width. The "RL" output is the estimated return loss (in dB) of % this integration. % % By default, pe...
github
SMASHtoolbox/release-master
store.m
.m
release-master/+SMASH/+FileAccess/@LUNA/store.m
945
utf_8
736a9f1da7c8aa57df8e7f993cfde973
% store Store scan in an archive file % % This method stores LUNA scans in a Sandia Data Archive (*.sda) file. In % addition to a file name, the scan must be given a text label that is % unique within the file. % >> store(object,filename,label); % Multiple scans, as well as other records, may be located in a singl...
github
SMASHtoolbox/release-master
view.m
.m
release-master/+SMASH/+FileAccess/@LUNA/view.m
1,326
utf_8
16f027925881badbfd89fc32a3d96050
% view Display scan % % This method displays a LUNA scan as a line plot in a new figure % view(object); % h=view(object); % return graphic handle % % % See also LUNA % % % created April 29, 2015 by Daniel Dolan (Sandia National Laboratories) % function varargout=view(object,units) % manage input if (nargin < 2)...
github
SMASHtoolbox/release-master
read.m
.m
release-master/+SMASH/+FileAccess/@DigitizerFile/read.m
3,224
utf_8
446f940c4b17fbf51c6e3e1edc348011
% READ Read file associated with a DigitizerFile object % % Syntax: % >> output=read(object,[option]); % The option input is only used for 'agilent' format files containing more % than one signal. The output is a structure with the following fields. % -FileName % -FileType % -FileOption % -Header % -...
github
SMASHtoolbox/release-master
select.m
.m
release-master/+SMASH/+FileAccess/@DigitizerFile/select.m
3,600
utf_8
362878d8e3ea20935eebe66f621a5542
% SELECT Select file/format for a DigitizerFile object % % Syntax: % >> object=select(object,[filename],[format]); % % see also FileAccess, probe, read % % function object=select(object,filename,format) if nargin<2 filename=''; end if nargin<3 format=''; end object=select@SMASH.FileAccess.File(object,fil...
github
SMASHtoolbox/release-master
probe.m
.m
release-master/+SMASH/+FileAccess/@DigitizerFile/probe.m
1,995
utf_8
d2f3bca6628b4a2f77cc9265cd567f81
% PROBE Probe the file associated with a DigitizerFile object % % Syntax: % >> output=probe(object); % The output is a structure with the following fields. % -NumberSignals % -Name ('agilent' format only) % % See also DigitizerFile, read % % function varargout=probe(object) % error checking assert(exist(obje...
github
SMASHtoolbox/release-master
read_tektronixWFM.m
.m
release-master/+SMASH/+FileAccess/@DigitizerFile/private/read_tektronixWFM.m
14,270
utf_8
079b78cca8e1dd4c9a62d01ddd7055c0
function [y,t,info,iover,iunder]=read_tektronixWFM(filename) % input check if nargin<1 filename=''; end if isempty(filename) [fname,pname]=uigetfile('*.wfm;*.WFM','Choose Tektronix WFM file'); filename=[pname fname]; end if exist(filename,'file')~=2 id='wfmread:FileNotFound'; message='F...
github
SMASHtoolbox/release-master
probe_agilent.m
.m
release-master/+SMASH/+FileAccess/@DigitizerFile/private/probe_agilent.m
4,232
utf_8
66b591bc8f069d2d39b00b070547f9da
function report=probe_agilent(filename) [~,~,ext]=fileparts(filename); switch lower(ext) case '.h5' report=probe_agilentH5(filename); case '.bin' report=probe_agilentBIN(filename); otherwise error('ERROR: invalid file extension'); end end %% function report=probe_agilentH5(filena...
github
SMASHtoolbox/release-master
read_lecroy.m
.m
release-master/+SMASH/+FileAccess/@DigitizerFile/private/read_lecroy.m
6,699
utf_8
3c7623fd88d3ab042d6f3da3362183a5
function varargout=read_lecroy(filename) % handle input if (nargin<1) || isempty(filename) [fname,pname]=uigetfile('*.trc;*.TRC','Choose LeCroy TRC file'); if isnumeric(fname) % user pressed cancel varargout{1}=fname; return end filename=[pname fname]; end % read file machineformat...
github
SMASHtoolbox/release-master
read_zdas.m
.m
release-master/+SMASH/+FileAccess/@DigitizerFile/private/read_zdas.m
1,628
utf_8
af75f08f84d0fcb85f35243d32f8b679
% function [signal,time]=read_zdas(filename,signal_name) file_id = hdfh('open',filename,'read',0); status = hdfv('start',file_id); vgroup_ref = 4; vdata_ref = 9; vgroup_id = hdfv('attach',file_id,vgroup_ref,'r'); count = hdfv('ntagrefs',vgroup_id); ndatasets = count/8; for i=0:ndatasets-1 vdata_id = hdfvs('attac...
github
SMASHtoolbox/release-master
read_agilent.m
.m
release-master/+SMASH/+FileAccess/@DigitizerFile/private/read_agilent.m
2,675
utf_8
5d8e8fc7ef00cb58c33a455f4a6f1166
function [signal,time]=read_agilent(filename,index) % manage input if (nargin<1) || isempty(filename) types={}; types(end+1,:)={'*.h5;*.H5','Agilent/Keysight HDF5 files'}; types(end+1,:)={'*.*','All files'}; [filename,pathname]=uigetfile(types,'Select Agilent/Keysight data file'); if isnumeric(file...
github
SMASHtoolbox/release-master
read_saturn.m
.m
release-master/+SMASH/+FileAccess/@DigitizerFile/private/read_saturn.m
1,640
utf_8
086486254e1c9035efae470def6d007c
% function [signal,time]=read_saturn(filename,signal_name) file_id = hdfh('open',filename,'read',0); status = hdfv('start',file_id); vgroup_ref = 6; % testing vdata_ref = 7; vgroup_id = hdfv('attach',file_id,vgroup_ref,'r'); count = hdfv('ntagrefs',vgroup_id); ndatasets = count/8; for i=0:ndatasets-1 vdata_id = ...
github
SMASHtoolbox/release-master
read_agilent.m
.m
release-master/+SMASH/+FileAccess/@DigitizerFile/private/old/read_agilent.m
1,593
utf_8
98db0dfd747d3c43c68eee93524fa019
% revised November 18, 2014 by Daniel Dolan % -I discovered that some signals are stored as integers, while % others are stored as floating point. function [signal,time]=read_agilent(filename,index) % handle input if (nargin<1) || isempty(filename) types={}; types(end+1,:)={'*.h5;*.H5','Agilent HDF5 file...
github
SMASHtoolbox/release-master
read.m
.m
release-master/+SMASH/+FileAccess/@CustomFile/read.m
906
utf_8
6481b091e632b4f10c29a2003c7741c4
% READ Read from a CustomFile object % % >> output=read(object); % % See also FileAccess, select % % function output=read(object) if ~exist(object.FullName,'file') error('ERROR: file does not exist'); end output.FileName=object.FileName; output.Format=object.Format; switch lower(object.Format) case 'ocean...
github
SMASHtoolbox/release-master
select.m
.m
release-master/+SMASH/+FileAccess/@CustomFile/select.m
1,053
utf_8
cc24052c6dafbb7c71c4c088d551e062
% SELECT Select file/format for a CustomFile object % % Syntax: % >> object=select(object,[filename],[format]); % % see also FileAccess, read % % function object=select(object,filename,format) if nargin<2 filename=''; end if nargin<3 format=''; end object=select@SMASH.FileAccess.File(object,filename); i...
github
SMASHtoolbox/release-master
OptronicLab.m
.m
release-master/+SMASH/+FileAccess/@CustomFile/private/OptronicLab.m
1,204
utf_8
2cd1fb59a0bc7872057a134d61f36376
% Read data from Optronic Laboratory 750 Spectradiometer file % [lambda,measurement,fileinfo]=OptronicLab(filename) % Created 3/1/2004 by Daniel Dolan % function [lambda,measurement,fileinfo]=OptronicLab(filename) if nargin<1 filename=[]; end if isempty(filename) [fname,pname]=uigetfile({... '*.dat;...