AutoMat / README.md
sheepy928's picture
Super-squash branch 'main' using huggingface_hub
e7d5e8f
metadata
license: cc-by-4.0
language:
  - en
tags:
  - benchmark
  - reproducibility
  - computational-materials-science
  - agents
pretty_name: AutoMat
size_categories:
  - n<1K
extra_gated_prompt: >-
  AutoMat is a benchmark of reproducibility claims from computational
  materials-science papers. Access is gated to keep the leaderboard meaningful
  and to respect upstream paper licensing. Please briefly describe how you
  intend to use the dataset.
extra_gated_fields:
  Name: text
  Affiliation: text
  Intended use: text
  I agree to use this dataset solely for non-commercial research: checkbox
extra_gated_button_content: Request access
configs:
  - config_name: default
    data_files:
      - split: claims
        path: manifest.parquet

AutoMat

AutoMat is a benchmark of reproducibility claims drawn from the computational materials-science literature. Each claim packages a published scientific statement together with the inputs, papers, and reference outputs an autonomous agent (or human) would need to attempt a faithful reproduction.

Layout

Each claim lives under claims/AUTOMAT-XXXX_<author>/ with three subtrees:

Path Contents
meta/provenance.json Authoritative metadata (claim ID, paper, DOI, author).
meta/claim.md Human-readable claim statement and reproduction instructions.
agent_view/ What an agent is allowed to see: claim.txt, the paper PDF, input data, custom code.
reference/ Ground-truth reproduction: expected outputs and a reference implementation.

Coverage

A small number of claims are withheld from the current release at their authors' request, because the underlying paper is still pending official publication. These will be added in a later revision once the corresponding papers are public. The published manifest.parquet lists exactly the claims included in this release, so any consumer that drives off the manifest stays in sync automatically.

Using the dataset

This is a gated dataset, so you must be logged into your Hugging Face account (and have been granted access) before downloading. Verify with:

hf auth whoami

If that reports you are not logged in, run:

hf auth login

Once you are logged in, you can download the dataset:

from huggingface_hub import snapshot_download
import pandas as pd

local = snapshot_download(repo_id="jhu-clsp/AutoMat", repo_type="dataset")
manifest = pd.read_parquet(f"{local}/manifest.parquet")
print(manifest.head())

To fetch a single claim only:

from huggingface_hub import snapshot_download
snapshot_download(
    repo_id="jhu-clsp/AutoMat",
    repo_type="dataset",
    allow_patterns=["manifest.parquet", "claims/AUTOMAT-0003*"],
)

The companion harness at https://github.com/JHU-CLSP/AutoMat consumes this layout directly.

Evaluation protocol

For each claim, an agent receives the contents of agent_view/ and the free-form claim text. A successful reproduction is one whose outputs match the artifacts in reference/expected/ (per the comparison rules described in the harness harness/evaluators/). Reference implementations under reference/impl/ are provided for context and to debug failed runs — they are not intended as the canonical reproduction path.

Licensing notes

  • The metadata, claim statements, and reference outputs in this dataset are released under CC-BY-4.0.
  • The paper PDFs included under agent_view/paper/ remain the property of their original publishers. Their inclusion here is for reproducibility research under the gated-access terms above; consult each paper's publisher for redistribution rights.

Citation

@article{huang2026automat,
  title     = {Can Coding Agents Reproduce Findings in
                Computational Materials Science?},
  author    = {Huang, Ziyang and Cao, Yi and
                Shargh, Ali K. and Luo, Jing and
                Mei, Ruidong and Zaki, Mohd and
                Liu, Zhan and Bunstine, Wyatt and
                Jurayj, William and Goswami, Somdatta and
                McQueen, Tyrel and Shields, Michael and
                El-Awady, Jaafar and Clancy, Paulette and
                Van Durme, Benjamin and Andrews, Nicholas and 
                Walden, William and Khashabi, Daniel},
  journal = {arXiv preprint arXiv:2605.00803},
  year    = {2026},
}

Changelog

  • v1.0.0 — initial release.