Datasets:
songlab
/
ukb_finemapped_coding

Dataset card Data Studio Files
xet
Community
chrom
stringclasses
22 values
pos
int64
111k
248M
ref
stringclasses
4 values
alt
stringclasses
4 values
pip
float64
0
1
trait
stringclasses
121 values
label
bool
2 classes
maf
float64
0
0.48
ld_score
float64
1.91
3.2k
consequence
stringclasses
1 value
tss_dist
int64
0
1.09M
gene
stringlengths
15
15
maf_bin
int64
0
96
1
205,915,146
T
C
0
false
0.09149
40.857
missense_variant
20,675
ENSG00000174502
18
1
206,479,061
G
A
0.000801
false
0.020337
30.741
missense_variant
6,206
ENSG00000263528
4
1
207,126,725
G
A
0
false
0.012239
24.755
missense_variant
22,418
ENSG00000123838
2
1
207,580,276
A
G
0
false
0.16425
134.86
missense_variant
64,856
ENSG00000197721
32
1
207,683,877
G
A
0
false
0.025
40.117
missense_variant
38,743
ENSG00000197721
4
1
207,899,860
C
A
0
false
0.019695
190.84
missense_variant
9,367
ENSG00000174059
3
1
209,623,908
T
C
0
false
0.02543
52.869
missense_variant
5,109
ENSG00000196878
5
1
211,982,699
A
G
0
false
0.0044
18.517
missense_variant
16,231
ENSG00000143493
0
1
212,699,732
C
T
0.00087
false
0.14649
128.45
missense_variant
107
ENSG00000123685
29
1
212,791,753
G
A
0
false
0.1487
248.15
missense_variant
22
ENSG00000117697
29
1
212,858,606
G
C
0
false
0.44606
336.96
missense_variant
309
ENSG00000162769
89
1
213,176,404
C
T
0
false
0.011458
8.0573
missense_variant
125,148
ENSG00000136643
2
1
214,640,782
G
A
0
false
0.051061
153.05
missense_variant
37,586
ENSG00000117724
10
1
214,642,954
A
G
0
false
0.035012
138.84
missense_variant
39,758
ENSG00000117724
7
1
215,817,137
C
T
0
false
0.030737
87.126
missense_variant
214,966
ENSG00000136636
6
1
219,610,858
C
T
0
false
0.078306
144.77
missense_variant
2,246
ENSG00000215817
15
1
220,796,686
A
G
0.999999
ALP,ALT,ApoA,HDLC,SHBG,TG
true
0.29705
71.444
missense_variant
68
ENSG00000186205
59
1
222,629,862
A
G
0
false
0.17114
122.47
missense_variant
1,387
ENSG00000154305
34
1
223,004,632
G
A
0.000714
false
0.016099
36.724
missense_variant
76,207
ENSG00000154309
3
1
223,110,495
T
C
0
false
0.009781
143.48
missense_variant
26,791
ENSG00000187554
1
1
223,543,146
C
T
0
false
0.11852
53.319
missense_variant
7,870
ENSG00000203697
23
1
224,681,022
A
G
0
false
0.000585
4.9067
missense_variant
64,704
ENSG00000143786
0
1
225,050,248
A
G
0
false
0.018802
166.44
missense_variant
67,435
ENSG00000185842
3
1
225,307,466
G
A
0
false
0.050232
249.04
missense_variant
56,802
ENSG00000185842
10
1
225,351,661
G
A
0
false
0.046389
89.595
missense_variant
38,078
ENSG00000185842
9
1
225,866,633
G
A
0
false
0.17439
94.066
missense_variant
114
ENSG00000196187
34
1
226,736,941
C
T
0.000724
false
0.17648
125.61
missense_variant
887
ENSG00000143772
35
1
226,994,332
G
A
0
false
0.10248
141.37
missense_variant
40,384
ENSG00000143776
20
1
228,214,420
A
G
0
false
0.39692
325.6
missense_variant
794
ENSG00000154358
79
1
231,272,345
A
G
0
false
0.22673
81.228
missense_variant
31,128
ENSG00000116906
45
1
233,328,039
G
C
0
false
0.10167
95.901
missense_variant
270
ENSG00000143674
20
1
236,013,545
C
T
0
false
0.013848
24.945
missense_variant
51,544
ENSG00000116962
2
1
241,635,141
G
A
0
false
0.019292
10.06
missense_variant
5,112
ENSG00000203668
3
1
241,788,027
C
T
0
false
0.16946
164.56
missense_variant
59,939
ENSG00000174371
33
1
246,565,949
C
T
0
false
0.00624
12.076
missense_variant
311
ENSG00000162851
1
1
246,767,262
G
C
0
false
0.072914
71.613
missense_variant
42,852
ENSG00000143653
14
1
246,860,986
T
C
0
false
0.012102
35.541
missense_variant
70,376
ENSG00000153207
2
1
247,451,084
T
C
0
false
0.14158
55.852
missense_variant
7,019
ENSG00000177535
28
1
247,531,647
G
C
0
false
0.16706
67.074
missense_variant
4,792
ENSG00000196242
33
1
247,588,579
C
G
0
false
0.01914
31.706
missense_variant
218
ENSG00000177489
3
1
247,605,760
A
G
0
false
0.11903
59.64
missense_variant
173
ENSG00000177476
23
1
247,605,780
C
A
0.000764
false
0.005099
11.503
missense_variant
193
ENSG00000177476
1
1
247,712,673
A
G
0.003742
false
0.089218
212.6
missense_variant
3,972
ENSG00000169214
17
1
247,857,254
G
C
0.943541
HbA1c
true
0.23985
126.19
missense_variant
66
ENSG00000162722
47
1
247,876,149
C
T
1
Hb,LOY,MCHC,MCV,Plt,RBC,WBC
true
0.33375
55.658
missense_variant
18,961
ENSG00000162722
66
1
247,921,132
G
A
0
false
0.24622
145.46
missense_variant
879
ENSG00000177462
49
1
247,921,325
C
T
0
false
0.24671
134.52
missense_variant
1,072
ENSG00000177462
49
1
247,949,534
A
G
0
false
0.04825
209.17
missense_variant
675
ENSG00000279263
9
1
248,145,857
C
A
0
false
0.031007
139.08
missense_variant
708
ENSG00000162727
6
1
248,294,677
C
A
0
false
0.26518
526.18
missense_variant
8,746
ENSG00000177201
53
1
248,295,133
A
G
0
false
0.006771
127.64
missense_variant
8,290
ENSG00000177201
1
1
248,295,416
T
C
0
false
0.0198
74.346
missense_variant
8,007
ENSG00000177201
3
1
248,324,036
C
A
0
false
0.26694
530.63
missense_variant
531
ENSG00000177186
53
10
815,030
A
G
0
false
0.0072
20.504
missense_variant
2,815
ENSG00000107929
1
10
3,138,035
T
C
0
false
0.27462
126.84
missense_variant
4,799
ENSG00000067057
54
10
3,155,664
C
G
0
false
0.05878
41.225
missense_variant
5,953
ENSG00000107959
11
10
3,159,873
T
C
0
false
0.29597
130.8
missense_variant
10,162
ENSG00000107959
59
10
5,731,071
A
G
0
false
0.032834
70.892
missense_variant
31,577
ENSG00000108021
6
10
5,761,405
A
G
0
false
0.010157
62.125
missense_variant
24,516
ENSG00000057608
2
10
7,965,596
G
C
0
false
0.39515
163.02
missense_variant
79,781
ENSG00000107485
79
10
11,463,744
G
A
0
false
0.025955
12.152
missense_variant
68,530
ENSG00000148429
5
10
11,869,765
G
A
0
false
0.13305
121.51
missense_variant
120
ENSG00000148426
26
10
13,110,400
T
A
0
false
0.027909
17.948
missense_variant
2,086
ENSG00000123240
5
10
14,966,494
A
C
0
false
0.31246
155.39
missense_variant
54
ENSG00000197889
62
10
15,607,711
G
A
0.000758
false
0.014499
49.157
missense_variant
112,210
ENSG00000077943
2
10
16,890,385
G
A
0.928392
UA
true
0.014385
16.13
missense_variant
72,930
ENSG00000148484
2
10
17,454,165
C
T
0
false
0.031177
110.66
missense_variant
429
ENSG00000148488
6
10
18,539,706
T
G
0
false
0.17913
161.82
missense_variant
111,880
ENSG00000241058
35
10
27,017,563
A
G
0
false
0.006713
23.417
missense_variant
2,883
ENSG00000107890
1
10
29,532,829
C
T
0
false
0.007871
23.565
missense_variant
10,301
ENSG00000197321
1
10
31,839,683
A
G
0
false
0.21432
289.57
missense_variant
14,496
ENSG00000165322
42
10
32,583,192
C
T
0
false
0.0956
403.85
missense_variant
39,891
ENSG00000216937
19
10
37,832,703
T
C
0
false
0.01793
62.942
missense_variant
24,493
ENSG00000198105
3
10
38,055,772
C
G
0
false
0.48479
1,636.4
missense_variant
38,561
ENSG00000075407
96
10
42,802,191
G
A
0
false
0.015644
111.74
missense_variant
19,395
ENSG00000165733
3
10
43,124,887
C
T
0
false
0.013291
22.634
missense_variant
13,557
ENSG00000169826
2
10
48,790,735
G
A
0
false
0.047364
74.354
missense_variant
105,858
ENSG00000128815
9
10
48,901,850
A
C
0
false
0.12607
144.96
missense_variant
37,989
ENSG00000165383
25
10
49,167,959
A
G
0
false
0.037178
127.25
missense_variant
20,352
ENSG00000204161
7
10
49,614,330
C
G
0
false
0.000501
6.8042
missense_variant
292
ENSG00000070748
0
10
50,814,012
C
T
0.999899
ApoB,Ca,GGT,LDLC,TG
true
0.010095
20.498
missense_variant
45,972
ENSG00000148584
2
10
53,822,367
G
A
0
false
0.015416
67.672
missense_variant
11,702
ENSG00000150275
3
10
54,132,882
T
C
0
false
0.024347
115.19
missense_variant
62,963
ENSG00000150275
4
10
62,399,574
G
T
0
false
0.38638
194.81
missense_variant
24,029
ENSG00000138311
77
10
69,097,207
C
G
0
false
0.009739
35.416
missense_variant
9,103
ENSG00000122862
1
10
69,227,268
G
A
0
false
0.028737
47.689
missense_variant
6,935
ENSG00000156510
5
10
69,232,878
C
T
0
false
0.007591
9.0036
missense_variant
12,545
ENSG00000156510
1
10
70,124,080
C
A
0.990405
WHRadjBMI
true
0.007363
8.0286
missense_variant
21
ENSG00000042286
1
10
71,760,875
A
C
0.994415
Neutro,WBC
true
0.09967
51.966
missense_variant
12,644
ENSG00000107738
19
10
73,763,876
A
G
0
false
0.021093
16.509
missense_variant
3,765
ENSG00000176986
4
10
75,108,141
T
C
0
false
0.268
185.15
missense_variant
957
ENSG00000079393
53
10
84,232,634
G
T
0
false
0.036201
52.536
missense_variant
1,967
ENSG00000148604
7
10
84,371,143
C
T
0
false
0.012157
86.908
missense_variant
42,479
ENSG00000107771
2
10
86,657,206
G
A
0
false
0.017722
51.518
missense_variant
2,588
ENSG00000289258
3
10
89,306,689
G
C
0
false
0.006701
74.602
missense_variant
726
ENSG00000119922
1
10
92,954,670
C
G
0.007506
false
0.10458
147.7
missense_variant
42,803
ENSG00000138190
20
10
93,325,837
T
C
0
false
0.014625
31.275
missense_variant
156,356
ENSG00000138119
2
10
93,401,511
C
T
0
false
0.020493
15.967
missense_variant
80,682
ENSG00000138119
4
10
93,500,222
C
G
0.000567
false
0.21729
63.113
missense_variant
3,609
ENSG00000138180
43
10
93,587,284
G
A
1
IGF1
true
0.015878
13.248
missense_variant
13,950
ENSG00000138207
3