Datasets:
songlab
/
ukb_finemapped_coding

Dataset card Data Studio Files
xet
Community
chrom
stringclasses
22 values
pos
int64
111k
248M
ref
stringclasses
4 values
alt
stringclasses
4 values
pip
float64
0
1
trait
stringclasses
121 values
label
bool
2 classes
maf
float64
0
0.48
ld_score
float64
1.91
3.2k
consequence
stringclasses
1 value
tss_dist
int64
0
1.09M
gene
stringlengths
15
15
maf_bin
int64
0
96
7
99,760,901
A
G
0.00211
false
0.007478
11.675
missense_variant
23,282
ENSG00000160868
1
7
99,876,235
G
C
0
false
0.056746
159.74
missense_variant
797
ENSG00000244623
11
7
99,892,245
G
C
0
false
0.067199
240.52
missense_variant
15,211
ENSG00000244623
13
7
100,493,694
C
T
0
false
0.011985
27.664
missense_variant
6,769
ENSG00000166924
2
7
100,562,641
T
C
0.004063
false
0.17919
116.76
missense_variant
6,973
ENSG00000106351
35
7
100,608,083
G
C
0
false
0.014305
48.541
missense_variant
4,018
ENSG00000106330
2
7
100,621,008
C
T
1
HbA1c,MCH,MCHC,MCV
true
0.030556
40.142
missense_variant
8,451
ENSG00000106330
6
7
100,722,010
G
A
0.999977
Hb,Ht,RBC
true
0.005447
16.123
missense_variant
1,541
ENSG00000130427
1
7
100,753,140
T
G
0
false
0.24534
221.39
missense_variant
19,118
ENSG00000146839
49
7
100,773,794
G
A
0
false
0.037743
40.344
missense_variant
39,772
ENSG00000146839
7
7
100,991,683
C
A
0.005724
false
0.47254
167.25
missense_variant
22,059
ENSG00000205277
94
7
100,995,866
A
G
0.003268
false
0.48383
161.24
missense_variant
24,214
ENSG00000169876
96
7
100,995,896
C
T
0.003322
false
0.48383
161.24
missense_variant
24,184
ENSG00000169876
96
7
101,035,126
G
A
0
false
0.091234
151.56
missense_variant
15,044
ENSG00000169876
18
7
102,913,156
C
G
0.000572
false
0.036964
92.417
missense_variant
150
ENSG00000128606
7
7
102,934,268
A
G
0.00189
false
0.061455
207.22
missense_variant
1,037
ENSG00000128606
12
7
103,593,755
C
T
0
false
0.018549
33.114
missense_variant
147,547
ENSG00000170615
3
7
105,107,452
G
T
0.003723
false
0.045064
38.666
missense_variant
25,615
ENSG00000135250
9
7
105,508,146
G
A
0
false
0.01677
8.7609
missense_variant
10
ENSG00000091127
3
7
111,728,425
G
A
0
false
0.007023
45.865
missense_variant
56,000
ENSG00000128512
1
7
121,873,507
T
G
0
false
0.14331
134.68
missense_variant
25
ENSG00000106278
28
7
122,304,185
T
C
0
false
0.008438
18
missense_variant
313
ENSG00000128610
1
7
123,874,842
G
T
0
false
0.17501
192.13
missense_variant
26,771
ENSG00000106302
35
7
127,375,029
G
A
1
ALP,Lym,eBMD
true
0.020422
30.666
missense_variant
17,088
ENSG00000048405
4
7
128,339,318
T
G
0
false
0.009703
67.007
missense_variant
4,551
ENSG00000106344
1
7
128,845,186
C
T
0
false
0.010179
14.941
missense_variant
14,759
ENSG00000128591
2
7
128,886,734
C
G
0
false
0.007029
16.211
missense_variant
20,403
ENSG00000272899
1
7
129,470,657
T
A
0
false
0.033224
21.486
missense_variant
31,873
ENSG00000240204
6
7
130,023,656
C
T
0.97404
DBP,SHBG
true
0.38958
70.946
missense_variant
27,717
ENSG00000091732
77
7
135,557,955
C
T
0
false
0.006665
18.526
missense_variant
37
ENSG00000155561
1
7
138,749,314
G
T
0
false
0.009382
8.3416
missense_variant
6,586
ENSG00000105929
1
7
138,903,664
T
C
0
false
0.019794
16.722
missense_variant
77,653
ENSG00000122778
3
7
139,055,291
G
C
0.002853
false
0.44755
114.29
missense_variant
19,248
ENSG00000146858
89
7
142,063,511
C
A
0
false
0.010444
7.6765
missense_variant
48,206
ENSG00000257743
2
7
142,670,801
G
A
0
false
0.42127
229.57
missense_variant
78,666
ENSG00000204983
84
7
143,395,176
G
A
0.999992
Ca,GGT,SHBG
true
0.051026
19.928
missense_variant
12,175
ENSG00000159840
10
7
143,398,060
C
T
0.999603
GGT
true
0.02043
32.416
missense_variant
10,795
ENSG00000146904
4
7
144,399,065
C
T
0.999769
Age_at_Menopause
true
0.011294
7.9262
missense_variant
4,627
ENSG00000106410
2
7
149,224,048
G
A
0.003947
false
0.025246
40.406
missense_variant
15,602
ENSG00000170260
5
7
149,733,278
C
T
0.000701
false
0.05096
43.27
missense_variant
12,327
ENSG00000133619
10
7
150,572,454
G
T
0
false
0.15791
227.28
missense_variant
5,017
ENSG00000133574
31
7
150,804,367
G
T
0.000808
false
0.17927
90.384
missense_variant
2,608
ENSG00000002933
35
7
150,999,023
T
G
0.001109
false
0.3435
64.013
missense_variant
5,218
ENSG00000164867
68
7
151,050,809
C
T
0
false
0.012558
10.187
missense_variant
110
ENSG00000213199
2
7
151,176,577
G
T
0.000773
false
0.022863
33.483
missense_variant
8,882
ENSG00000164900
4
7
151,204,826
G
T
0.001553
false
0.017154
18.221
missense_variant
669
ENSG00000278685
3
7
152,251,983
C
G
0
false
0.016233
336.08
missense_variant
731
ENSG00000055609
3
7
155,741,993
C
T
0
false
0.004305
6.866
missense_variant
4,425
ENSG00000184863
0
7
156,762,136
T
C
0
false
0.056908
161.54
missense_variant
118,345
ENSG00000105982
11
7
156,949,807
C
G
0
false
0.14934
269.08
missense_variant
94
ENSG00000146909
29
8
6,480,785
C
A
0
false
0.14977
215.06
missense_variant
3,518
ENSG00000147316
29
8
10,498,662
G
T
0
false
0.23792
622.64
missense_variant
19,291
ENSG00000253649
47
8
10,607,553
G
T
0
false
0.009072
24.406
missense_variant
47,589
ENSG00000183638
1
8
11,779,767
G
A
0
false
0.0132
75.74
missense_variant
10,056
ENSG00000154328
2
8
13,499,351
G
C
0
false
0.007204
23.312
missense_variant
109
ENSG00000164741
1
8
17,655,975
T
C
0
false
0.006926
19.638
missense_variant
20,517
ENSG00000129422
1
8
17,755,366
A
G
0
false
0.19931
101.12
missense_variant
614
ENSG00000129422
39
8
18,871,818
C
A
0
false
0.014038
11.888
missense_variant
15,215
ENSG00000156011
2
8
18,872,308
T
G
0.000936
false
0.30146
82.87
missense_variant
14,725
ENSG00000156011
60
8
19,956,018
A
G
1
ApoA,HDLC
true
0.018533
19.636
missense_variant
16,764
ENSG00000175445
3
8
22,098,597
A
G
0.001111
false
0.42219
64.908
missense_variant
9,446
ENSG00000158863
84
8
22,107,602
T
C
0.007332
false
0.46682
68.045
missense_variant
1,816
ENSG00000275074
93
8
22,125,484
A
G
0.001477
false
0.10222
34.657
missense_variant
5,525
ENSG00000168453
20
8
22,727,205
T
C
0
false
0.47326
34.274
missense_variant
33,724
ENSG00000179388
94
8
23,043,188
G
A
0.004571
false
0.069575
25.462
missense_variant
25,832
ENSG00000120889
13
8
23,682,736
G
A
0.001739
false
0.047741
32.275
missense_variant
152
ENSG00000167034
9
8
24,341,705
C
A
0
false
0.030776
195.08
missense_variant
52
ENSG00000042980
6
8
26,508,200
C
T
0.001125
false
0.10388
75.944
missense_variant
5,671
ENSG00000240694
20
8
27,500,978
C
T
0
false
0.017575
32.395
missense_variant
9,767
ENSG00000120915
3
8
28,447,250
G
T
0
false
0.039314
25.86
missense_variant
9,555
ENSG00000214050
7
8
28,447,252
C
T
0
false
0.36107
34.862
missense_variant
9,553
ENSG00000214050
72
8
29,167,426
G
A
1
ApoB,LDLC,TC
true
0.017343
10.794
missense_variant
59,233
ENSG00000197892
3
8
30,844,479
A
C
0
false
0.091906
209.22
missense_variant
4,537
ENSG00000133863
18
8
31,640,156
G
A
0
false
0.11597
132.96
missense_variant
170
ENSG00000157168
23
8
36,930,961
A
G
0.005803
false
0.13218
99.691
missense_variant
146,586
ENSG00000215262
26
8
37,835,186
G
A
0
false
0.02374
7.4474
missense_variant
14,651
ENSG00000104221
4
8
42,048,577
A
G
0
false
0.070534
156.16
missense_variant
3,409
ENSG00000083168
14
8
47,972,876
T
A
0.999688
MCV
true
0.14591
185.65
missense_variant
8,283
ENSG00000104738
29
8
49,075,242
A
G
0
false
0.027522
41.802
missense_variant
2,887
ENSG00000168333
5
8
54,626,497
G
A
0
false
0.27262
188.81
missense_variant
10,400
ENSG00000104237
54
8
60,741,739
T
A
0
false
0.022964
61.796
missense_variant
305
ENSG00000171316
4
8
65,779,776
C
T
0.999696
eGFR,eGFRcys
true
0.067005
56.34
missense_variant
9,307
ENSG00000205268
13
8
72,063,566
T
G
0
false
0.40506
102.16
missense_variant
1,991
ENSG00000104321
81
8
78,717,351
C
T
0
false
0.021926
29.084
missense_variant
19,944
ENSG00000104427
4
8
81,694,792
A
G
0
false
0.023031
55.097
missense_variant
265
ENSG00000253598
4
8
85,332,503
G
A
0
false
0.006822
69.873
missense_variant
5,791
ENSG00000133742
1
8
86,507,086
T
G
0
false
0.27324
288.86
missense_variant
8
ENSG00000176623
54
8
86,647,872
T
C
0
false
0.065452
108.92
missense_variant
68,665
ENSG00000170289
13
8
91,334,295
A
G
0
false
0.03021
125.72
missense_variant
38,670
ENSG00000147606
6
8
93,733,821
T
G
0
false
0.049617
59.93
missense_variant
6,896
ENSG00000183808
9
8
93,780,659
G
A
0
false
0.01156
16.933
missense_variant
14,156
ENSG00000164953
2
8
97,029,409
G
A
0
false
0.00926
21.376
missense_variant
59
ENSG00000104324
1
8
97,691,089
A
G
0
false
0.058234
108.19
missense_variant
41
ENSG00000147649
11
8
100,240,452
T
C
0.000729
false
0.39168
239.34
missense_variant
62,777
ENSG00000034677
78
8
102,560,798
C
A
0
false
0.013295
20.36
missense_variant
335
ENSG00000155087
2
8
105,802,747
C
G
0
false
0.000068
3.405
missense_variant
273,862
ENSG00000169946
0
8
109,385,551
A
G
0
false
0.055458
128.08
missense_variant
23,089
ENSG00000205038
11
8
119,583,783
A
G
0.993664
IGF1
true
0.0556
43.442
missense_variant
9,224
ENSG00000136960
11
8
119,832,542
G
A
0
false
0.15594
182.49
missense_variant
225
ENSG00000064313
31
8
119,834,948
T
C
0.003219
false
0.31019
182.44
missense_variant
2,092
ENSG00000064313
62