| |
|
|
| file_arg <- grep("^--file=", commandArgs(FALSE), value = TRUE) |
| script_path <- sub("^--file=", "", file_arg[[1]]) |
| source(file.path(dirname(normalizePath(script_path, mustWork = FALSE)), "common.R")) |
|
|
| root <- set_replication_root() |
| args <- commandArgs(trailingOnly = TRUE) |
| if (length(args) == 0) { |
| stop("Pass one or more outer-sequence row indices. Example: Rscript code/02_run_main_ate_optional.R 1") |
| } |
|
|
| resave_tfrecords <- parse_env_flag("IMAGEDECONFOUND_RESAVE_TFRECORDS", default = FALSE) |
| tfrecord_home <- resolve_external_path("IMAGEDECONFOUND_TFRECORD_HOME", "external_artifacts/tfrecords") |
| image_root <- resolve_external_path("IMAGEDECONFOUND_IMAGE_ROOT", "external_artifacts/images/dhs_tifs_5k_3yr") |
|
|
| ensure_dir(tfrecord_home) |
|
|
| if (!resave_tfrecords) { |
| tfrecord_n <- length(list.files(tfrecord_home, pattern = "\\.tfrecord$", full.names = TRUE)) |
| if (tfrecord_n == 0) { |
| stop( |
| "No TFRecord files were found in ", tfrecord_home, ". ", |
| "Either place the required TFRecords there or rerun with IMAGEDECONFOUND_RESAVE_TFRECORDS=true ", |
| "after downloading the excluded image files locally." |
| ) |
| } |
| } else if (!dir.exists(image_root)) { |
| stop( |
| "IMAGEDECONFOUND_RESAVE_TFRECORDS=true but the image directory does not exist: ", |
| image_root |
| ) |
| } |
|
|
| run_replication_script( |
| "code/lib/call_CI_Conf_5k_3yr.R", |
| overrides = list( |
| SAVE_RESULTS_FOLDER_OVERRIDE = "per_run_csv/Epoch5EarlyStopNewTreatDefLabelS_Run2", |
| X_APPROACH_OPTIONS_OVERRIDE = c( |
| "noX", "onlyX", "onlyFE", "onlyXandFE", |
| "withX", "withFE", "withXandFE" |
| ), |
| REQUIRE_EXPLICIT_OUTER_SEQ = TRUE, |
| TFRECORD_HOME_OVERRIDE = tfrecord_home, |
| IMAGE_ROOT_OVERRIDE = image_root, |
| RESAVE_TFRECORDS_OVERRIDE = resave_tfrecords |
| ) |
| ) |
|
|
