| model,latent,dw,ckpt,is_fm,metric,mean,std,n_seeds |
| AE,10,0.0,best,False,$R^2$,0.5353656699473229,0.016584586604053066,5 |
| AE,10,0.0,best,False,MSE,0.04687128285199295,0.003264235965769981,5 |
| AE,10,0.0,best,False,Energy distance,14.366395123103434,0.7943115199090115,5 |
| AE,10,0.0,best,False,MMD-RBF,0.5111103085784426,0.008376079204897146,5 |
| AE,10,0.0,best,False,Pearson delta,0.10522716584935636,0.02038200064958018,5 |
| AE,10,0.0,best,False,KNN purity (k=10),0.48432474509024165,0.013559410978303212,5 |
| AE,10,0.0,best,False,KNN purity (normalized),0.3442522434584697,0.10021570216774284,5 |
| AE,10,0.0,best,False,Pathway Spearman,0.5246820771463209,0.030818770820596506,5 |
| AE,10,0.0,best,False,Coexpression Spearman,0.7755949686385026,0.0035658579214490685,5 |
| AE,10,0.0,best,False,Cell-cycle (same phase),0.33285844120996844,0.007295661350748421,5 |
| AE,10,0.0,best,False,DEG dice@100 (pred),0.015484458010423096,0.0030001603720263225,5 |
| AE,10,0.0,best,False,Mean gene-diff Spearman,-0.00714117457154845,0.008800719614586056,5 |
| AE,10,0.0,best,False,Cytokine Spearman,0.6681852381700389,0.02016322216514975,5 |
| AE,32,0.0,best,False,$R^2$,0.7216597584905317,0.0059619430304771815,5 |
| AE,32,0.0,best,False,MSE,0.02605777476251911,0.001008552439062114,5 |
| AE,32,0.0,best,False,Energy distance,7.094074465180199,0.3444026148702169,5 |
| AE,32,0.0,best,False,MMD-RBF,0.2804478283845844,0.009815324369711541,5 |
| AE,32,0.0,best,False,Pearson delta,0.156112176726994,0.014562539407704972,5 |
| AE,32,0.0,best,False,KNN purity (k=10),0.4813123965424646,0.011383436074433196,5 |
| AE,32,0.0,best,False,KNN purity (normalized),0.3499303973218185,0.06804747676650563,5 |
| AE,32,0.0,best,False,Pathway Spearman,0.7102689364856694,0.027289371723829208,5 |
| AE,32,0.0,best,False,Coexpression Spearman,0.8326413368797032,0.006001768144042856,5 |
| AE,32,0.0,best,False,Cell-cycle (same phase),0.34181646848511604,0.006090912332682822,5 |
| AE,32,0.0,best,False,DEG dice@100 (pred),0.020550356443290042,0.003756392254740831,5 |
| AE,32,0.0,best,False,Mean gene-diff Spearman,0.014486069800024159,0.0016221509021572785,5 |
| AE,32,0.0,best,False,Cytokine Spearman,0.778003862824154,0.013328473471266925,5 |
| AE,128,0.0,best,False,$R^2$,0.23796279987917762,0.04610316475483632,5 |
| AE,128,0.0,best,False,MSE,0.059092432818842175,0.0023860557339527608,5 |
| AE,128,0.0,best,False,Energy distance,5.319067310493804,0.11930278774132802,5 |
| AE,128,0.0,best,False,MMD-RBF,0.19574669656164442,0.0036358668973757655,5 |
| AE,128,0.0,best,False,Pearson delta,0.12561612222006613,0.005218836060667264,5 |
| AE,128,0.0,best,False,KNN purity (k=10),0.5042581993618802,0.010534399213162224,5 |
| AE,128,0.0,best,False,KNN purity (normalized),0.4266161676091792,0.052454449640001975,5 |
| AE,128,0.0,best,False,Pathway Spearman,0.8090047011866517,0.014841754052641381,5 |
| AE,128,0.0,best,False,Coexpression Spearman,0.8793284412103622,0.0030578303932960378,5 |
| AE,128,0.0,best,False,Cell-cycle (same phase),0.3448119767372134,0.00249264674825878,5 |
| AE,128,0.0,best,False,DEG dice@100 (pred),0.05388635355170698,0.007539554114235383,5 |
| AE,128,0.0,best,False,Mean gene-diff Spearman,0.07233460919918835,0.016189209803910237,5 |
| AE,128,0.0,best,False,Cytokine Spearman,0.8319650334859338,0.011374356747487649,5 |
| AE,512,0.0,best,False,$R^2$,0.5005798721105237,0.03569556400923619,5 |
| AE,512,0.0,best,False,MSE,0.04079561454742916,0.0015311893325504653,5 |
| AE,512,0.0,best,False,Energy distance,3.0815827355891536,0.11603372776972655,5 |
| AE,512,0.0,best,False,MMD-RBF,0.14575042235230423,0.00455854713688397,5 |
| AE,512,0.0,best,False,Pearson delta,0.17345712241388989,0.008706015266607815,5 |
| AE,512,0.0,best,False,KNN purity (k=10),0.5263112097593237,0.005381337703685839,5 |
| AE,512,0.0,best,False,KNN purity (normalized),0.4982723192494373,0.037161670048595795,5 |
| AE,512,0.0,best,False,Pathway Spearman,0.7658481484041488,0.019568875572921824,5 |
| AE,512,0.0,best,False,Coexpression Spearman,0.9166573461053593,0.0027277442504588397,5 |
| AE,512,0.0,best,False,Cell-cycle (same phase),0.3424488642711162,0.0015854760901864646,5 |
| AE,512,0.0,best,False,DEG dice@100 (pred),0.06610456432681781,0.005867201336651509,5 |
| AE,512,0.0,best,False,Mean gene-diff Spearman,0.11705701222149256,0.016762353877180128,5 |
| AE,512,0.0,best,False,Cytokine Spearman,0.803426728618702,0.018247726889253392,5 |
| AE,2048,0.0,best,False,$R^2$,0.8868640611339098,0.007439146576888497,5 |
| AE,2048,0.0,best,False,MSE,0.009617644109021875,0.00034450600124140304,5 |
| AE,2048,0.0,best,False,Energy distance,2.200263720458886,0.056891429660743044,5 |
| AE,2048,0.0,best,False,MMD-RBF,0.13796844115811613,0.0038800570590745067,5 |
| AE,2048,0.0,best,False,Pearson delta,0.3472358313886677,0.020876839621202282,5 |
| AE,2048,0.0,best,False,KNN purity (k=10),0.5374106672882304,0.006899260593063725,5 |
| AE,2048,0.0,best,False,KNN purity (normalized),0.5406760952316076,0.025649471732722032,5 |
| AE,2048,0.0,best,False,Pathway Spearman,0.8978083226094513,0.015850260476167843,5 |
| AE,2048,0.0,best,False,Coexpression Spearman,0.9448573807474997,0.0017716940113000547,5 |
| AE,2048,0.0,best,False,Cell-cycle (same phase),0.34000099686898,0.0034248977188157574,5 |
| AE,2048,0.0,best,False,DEG dice@100 (pred),0.07093693692445438,0.007534887248623188,5 |
| AE,2048,0.0,best,False,Mean gene-diff Spearman,0.16027369575042702,0.02148004494490737,5 |
| AE,2048,0.0,best,False,Cytokine Spearman,0.896709043582638,0.00482470257683982,5 |
| nlscVI,10,0.0,best,False,$R^2$,0.4786945482777244,0.03212785399102144,5 |
| nlscVI,10,0.0,best,False,MSE,0.0490552938584197,0.0022553796111982956,5 |
| nlscVI,10,0.0,best,False,Energy distance,14.147348903377846,0.5244823480662504,5 |
| nlscVI,10,0.0,best,False,MMD-RBF,0.564703671443484,0.016411733003302873,5 |
| nlscVI,10,0.0,best,False,Pearson delta,0.12800457452718447,0.016947152565765806,5 |
| nlscVI,10,0.0,best,False,KNN purity (k=10),0.5160544416807096,0.014359642887009513,5 |
| nlscVI,10,0.0,best,False,KNN purity (normalized),0.5212053495681701,0.0903256422091143,5 |
| nlscVI,10,0.0,best,False,Pathway Spearman,0.5926851071717514,0.028320296688951186,5 |
| nlscVI,10,0.0,best,False,Coexpression Spearman,0.7528770012081571,0.0023503067894657765,5 |
| nlscVI,10,0.0,best,False,Cell-cycle (same phase),0.3371403078516732,0.008379022302254211,5 |
| nlscVI,10,0.0,best,False,DEG dice@100 (pred),0.01649919485232403,0.001969328871885997,5 |
| nlscVI,10,0.0,best,False,Mean gene-diff Spearman,0.009874378911903837,0.014123505918316636,5 |
| nlscVI,10,0.0,best,False,Cytokine Spearman,0.6907909807765351,0.014423438587599929,5 |
| nlscVI,32,0.0,best,False,$R^2$,0.7374619889342584,0.011893674749617982,5 |
| nlscVI,32,0.0,best,False,MSE,0.024138182253713426,0.0011915834980929338,5 |
| nlscVI,32,0.0,best,False,Energy distance,6.768540198150232,0.3252115784600086,5 |
| nlscVI,32,0.0,best,False,MMD-RBF,0.2519339964079176,0.009023860252722839,5 |
| nlscVI,32,0.0,best,False,Pearson delta,0.1907061380769349,0.017728238617788383,5 |
| nlscVI,32,0.0,best,False,KNN purity (k=10),0.5103142790897441,0.012289973976321119,5 |
| nlscVI,32,0.0,best,False,KNN purity (normalized),0.4610371097672668,0.07162529006216832,5 |
| nlscVI,32,0.0,best,False,Pathway Spearman,0.7093356587581205,0.035884721183705316,5 |
| nlscVI,32,0.0,best,False,Coexpression Spearman,0.8195036261086008,0.0006781431374841755,5 |
| nlscVI,32,0.0,best,False,Cell-cycle (same phase),0.34966568034727663,0.005930280920480499,5 |
| nlscVI,32,0.0,best,False,DEG dice@100 (pred),0.035420356321501055,0.004888171520817625,5 |
| nlscVI,32,0.0,best,False,Mean gene-diff Spearman,0.04316805363931626,0.004208394121437137,5 |
| nlscVI,32,0.0,best,False,Cytokine Spearman,0.7863441942345879,0.013788872923569714,5 |
| nlscVI,128,0.0,best,False,$R^2$,0.9155448654020331,0.003946980425118402,5 |
| nlscVI,128,0.0,best,False,MSE,0.007773653524102775,0.0005449621176335145,5 |
| nlscVI,128,0.0,best,False,Energy distance,1.7874637885842872,0.13635732987882979,5 |
| nlscVI,128,0.0,best,False,MMD-RBF,0.09361500528071579,0.00616296555298415,5 |
| nlscVI,128,0.0,best,False,Pearson delta,0.293403132003485,0.023937578337044033,5 |
| nlscVI,128,0.0,best,False,KNN purity (k=10),0.4928660070016351,0.008819389779784501,5 |
| nlscVI,128,0.0,best,False,KNN purity (normalized),0.41368885240809067,0.05063083716350619,5 |
| nlscVI,128,0.0,best,False,Pathway Spearman,0.8578239690881571,0.029914378678322865,5 |
| nlscVI,128,0.0,best,False,Coexpression Spearman,0.8492964550300091,0.0018340393314040982,5 |
| nlscVI,128,0.0,best,False,Cell-cycle (same phase),0.3489529171778899,0.006647935391040602,5 |
| nlscVI,128,0.0,best,False,DEG dice@100 (pred),0.04937005085454819,0.007567979058451172,5 |
| nlscVI,128,0.0,best,False,Mean gene-diff Spearman,0.10358213581428614,0.021474321155785327,5 |
| nlscVI,128,0.0,best,False,Cytokine Spearman,0.8896521046502434,0.009008446725889763,5 |
| nlscVI,512,0.0,best,False,$R^2$,0.9205514328614053,0.004969266142816994,5 |
| nlscVI,512,0.0,best,False,MSE,0.007312450957045888,0.00034907667015310307,5 |
| nlscVI,512,0.0,best,False,Energy distance,1.7306401868540817,0.08720933433837041,5 |
| nlscVI,512,0.0,best,False,MMD-RBF,0.10004051049431725,0.0052545359436340635,5 |
| nlscVI,512,0.0,best,False,Pearson delta,0.2704971375637009,0.004379836111793402,5 |
| nlscVI,512,0.0,best,False,KNN purity (k=10),0.4643379232150712,0.006334895584217079,5 |
| nlscVI,512,0.0,best,False,KNN purity (normalized),0.3596545807061373,0.025594377271606353,5 |
| nlscVI,512,0.0,best,False,Pathway Spearman,0.8807334457071286,0.026332108327338063,5 |
| nlscVI,512,0.0,best,False,Coexpression Spearman,0.875967449757281,0.0021964518469220636,5 |
| nlscVI,512,0.0,best,False,Cell-cycle (same phase),0.3415448624079791,0.004664827737987481,5 |
| nlscVI,512,0.0,best,False,DEG dice@100 (pred),0.06350864887699428,0.010055846117757216,5 |
| nlscVI,512,0.0,best,False,Mean gene-diff Spearman,0.049267509275592675,0.014158235381324012,5 |
| nlscVI,512,0.0,best,False,Cytokine Spearman,0.8756075550479911,0.0038830405527753766,5 |
| nlscVI,2048,0.0,best,False,$R^2$,0.9359314678018421,0.004645074912377673,5 |
| nlscVI,2048,0.0,best,False,MSE,0.005539750906364366,0.00017031219238923997,5 |
| nlscVI,2048,0.0,best,False,Energy distance,2.808934747049925,0.08556276667680014,5 |
| nlscVI,2048,0.0,best,False,MMD-RBF,0.1667150778386321,0.005004454665375641,5 |
| nlscVI,2048,0.0,best,False,Pearson delta,0.39345600450448465,0.015206906674203352,5 |
| nlscVI,2048,0.0,best,False,KNN purity (k=10),0.511517328104155,0.005252888896051159,5 |
| nlscVI,2048,0.0,best,False,KNN purity (normalized),0.4527882083190543,0.04042775973115302,5 |
| nlscVI,2048,0.0,best,False,Pathway Spearman,0.9075444265981556,0.010015822083965151,5 |
| nlscVI,2048,0.0,best,False,Coexpression Spearman,0.9114148705946746,0.00166467049726672,5 |
| nlscVI,2048,0.0,best,False,Cell-cycle (same phase),0.33773506471693965,0.005914608229503317,5 |
| nlscVI,2048,0.0,best,False,DEG dice@100 (pred),0.0749548196437512,0.01061279045728308,5 |
| nlscVI,2048,0.0,best,False,Mean gene-diff Spearman,0.14796568490765033,0.019946631195651175,5 |
| nlscVI,2048,0.0,best,False,Cytokine Spearman,0.9024692680590893,0.005089593078877723,5 |
| PCA,10,0.0,best,False,$R^2$,0.671119404289011,0.015512775322365682,5 |
| PCA,10,0.0,best,False,MSE,0.03159500210035586,0.0012525639086996515,5 |
| PCA,10,0.0,best,False,Energy distance,14.852256447597682,0.37132270967321984,5 |
| PCA,10,0.0,best,False,MMD-RBF,0.8532907063960987,0.014281697828962756,5 |
| PCA,10,0.0,best,False,Pearson delta,0.13711746151827411,0.020000175448830013,5 |
| PCA,10,0.0,best,False,KNN purity (k=10),0.4922268436430096,0.032018754488628384,5 |
| PCA,10,0.0,best,False,KNN purity (normalized),0.3601841638958728,0.17782627372972695,5 |
| PCA,10,0.0,best,False,Pathway Spearman,0.6456327318555518,0.04175679516338217,5 |
| PCA,10,0.0,best,False,Coexpression Spearman,0.5027494375333272,0.0017556180662863235,5 |
| PCA,10,0.0,best,False,Cell-cycle (same phase),0.37766965514849193,0.008682356207282273,5 |
| PCA,10,0.0,best,False,DEG dice@100 (pred),0.018186418612593753,0.001775855688207936,5 |
| PCA,10,0.0,best,False,Mean gene-diff Spearman,0.02845433643062568,0.003899123322851771,5 |
| PCA,10,0.0,best,False,Cytokine Spearman,0.7336632062315557,0.01744576061203133,5 |
| PCA,32,0.0,best,False,$R^2$,0.8301617956980649,0.006641664158287063,5 |
| PCA,32,0.0,best,False,MSE,0.01720606743043377,0.0011191520064314094,5 |
| PCA,32,0.0,best,False,Energy distance,7.424553461846523,0.3060464395581609,5 |
| PCA,32,0.0,best,False,MMD-RBF,0.4915597419645893,0.011409098727194547,5 |
| PCA,32,0.0,best,False,Pearson delta,0.2148705748322146,0.021504139189965882,5 |
| PCA,32,0.0,best,False,KNN purity (k=10),0.512535908916631,0.007246321266712613,5 |
| PCA,32,0.0,best,False,KNN purity (normalized),0.4274781984927986,0.04577876623289757,5 |
| PCA,32,0.0,best,False,Pathway Spearman,0.7827607460792654,0.025381447102710963,5 |
| PCA,32,0.0,best,False,Coexpression Spearman,0.7490984282146551,0.0031652744081249896,5 |
| PCA,32,0.0,best,False,Cell-cycle (same phase),0.34566236217629553,0.004601064270040738,5 |
| PCA,32,0.0,best,False,DEG dice@100 (pred),0.026509770235928286,0.0055313139863376656,5 |
| PCA,32,0.0,best,False,Mean gene-diff Spearman,0.06979206838613772,0.014985891803203467,5 |
| PCA,32,0.0,best,False,Cytokine Spearman,0.8441341101464701,0.0068842479778736245,5 |
| PCA,128,0.0,best,False,$R^2$,0.9262549940967556,0.006372016569481926,5 |
| PCA,128,0.0,best,False,MSE,0.006821001723322448,0.0005628574527836873,5 |
| PCA,128,0.0,best,False,Energy distance,1.763205174434982,0.08477505727179888,5 |
| PCA,128,0.0,best,False,MMD-RBF,0.12966297903465027,0.005237434457186857,5 |
| PCA,128,0.0,best,False,Pearson delta,0.35901133946310065,0.016299445822534175,5 |
| PCA,128,0.0,best,False,KNN purity (k=10),0.5350865162336208,0.00995612926124398,5 |
| PCA,128,0.0,best,False,KNN purity (normalized),0.5468316325463938,0.03523345871056765,5 |
| PCA,128,0.0,best,False,Pathway Spearman,0.8977780578792176,0.014517194545814112,5 |
| PCA,128,0.0,best,False,Coexpression Spearman,0.8361840156338516,0.0044379699310827265,5 |
| PCA,128,0.0,best,False,Cell-cycle (same phase),0.34854568002522224,0.0068568091383121145,5 |
| PCA,128,0.0,best,False,DEG dice@100 (pred),0.06001467072644673,0.009886711771855192,5 |
| PCA,128,0.0,best,False,Mean gene-diff Spearman,0.14817847825153566,0.022586579866450154,5 |
| PCA,128,0.0,best,False,Cytokine Spearman,0.9011856444325893,0.005127301799116078,5 |
| PCA,512,0.0,best,False,$R^2$,0.9261522631461547,0.0057009938662750045,5 |
| PCA,512,0.0,best,False,MSE,0.006647320600732016,0.0004087719386919172,5 |
| PCA,512,0.0,best,False,Energy distance,1.6510950162699323,0.03240013134358909,5 |
| PCA,512,0.0,best,False,MMD-RBF,0.11320398009963244,0.0030454593431040664,5 |
| PCA,512,0.0,best,False,Pearson delta,0.3970863884363502,0.01993069463919355,5 |
| PCA,512,0.0,best,False,KNN purity (k=10),0.5432478283802302,0.007137567681477765,5 |
| PCA,512,0.0,best,False,KNN purity (normalized),0.5490891074955858,0.02204410017381949,5 |
| PCA,512,0.0,best,False,Pathway Spearman,0.9087362179824664,0.015720801731046573,5 |
| PCA,512,0.0,best,False,Coexpression Spearman,0.9037442961224567,0.0024729842442811146,5 |
| PCA,512,0.0,best,False,Cell-cycle (same phase),0.33928832030391615,0.004947257077355108,5 |
| PCA,512,0.0,best,False,DEG dice@100 (pred),0.06862482043362253,0.006431491022662269,5 |
| PCA,512,0.0,best,False,Mean gene-diff Spearman,0.1250522658269109,0.024316209446878304,5 |
| PCA,512,0.0,best,False,Cytokine Spearman,0.8949271242783535,0.0026172868447133417,5 |
| PCA,2048,0.0,best,False,$R^2$,0.9534043691489259,0.0031091588033522765,5 |
| PCA,2048,0.0,best,False,MSE,0.004228011589839959,0.00024297314241527324,5 |
| PCA,2048,0.0,best,False,Energy distance,1.2161087882232369,0.01664032116416771,5 |
| PCA,2048,0.0,best,False,MMD-RBF,0.10445802583097386,0.003372953698196498,5 |
| PCA,2048,0.0,best,False,Pearson delta,0.4752039297733176,0.018318272177146613,5 |
| PCA,2048,0.0,best,False,KNN purity (k=10),0.5356064988143029,0.00454195933052309,5 |
| PCA,2048,0.0,best,False,KNN purity (normalized),0.5286853153048734,0.005185031836241164,5 |
| PCA,2048,0.0,best,False,Pathway Spearman,0.9328371444193839,0.01160095592289536,5 |
| PCA,2048,0.0,best,False,Coexpression Spearman,0.9467044219180119,0.0025917720155316016,5 |
| PCA,2048,0.0,best,False,Cell-cycle (same phase),0.3377070585643735,0.0019509898010037848,5 |
| PCA,2048,0.0,best,False,DEG dice@100 (pred),0.0704209508418395,0.009481927155683485,5 |
| PCA,2048,0.0,best,False,Mean gene-diff Spearman,0.15590393205926173,0.02153480152509522,5 |
| PCA,2048,0.0,best,False,Cytokine Spearman,0.910580299647242,0.005933103845430454,5 |
| SE,2058,0.0,best,True,$R^2$,0.9618142669418089,0.0034934442860683657,5 |
| SE,2058,0.0,best,True,MSE,0.0033893369704151,0.000254474304241523,5 |
| SE,2058,0.0,best,True,Energy distance,0.5383200507291275,0.054117174867532515,5 |
| SE,2058,0.0,best,True,MMD-RBF,0.03628651878260393,0.003284565527832803,5 |
| SE,2058,0.0,best,True,Pearson delta,0.5248468985673932,0.013922675029202561,5 |
| SE,2058,0.0,best,True,KNN purity (k=10),0.5559644599225808,0.0078730425419429,5 |
| SE,2058,0.0,best,True,KNN purity (normalized),0.6024982970544714,0.025902876462077878,5 |
| SE,2058,0.0,best,True,Pathway Spearman,0.9461933544269963,0.009725698378656908,5 |
| SE,2058,0.0,best,True,Coexpression Spearman,0.9427524128837721,0.0020893434919982993,5 |
| SE,2058,0.0,best,True,Cell-cycle (same phase),0.3372554567011856,0.005348909814250639,5 |
| SE,2058,0.0,best,True,DEG dice@100 (pred),0.09813127640608318,0.007561273631103856,5 |
| SE,2058,0.0,best,True,Mean gene-diff Spearman,0.2514584824657428,0.027267417782213487,5 |
| SE,2058,0.0,best,True,Cytokine Spearman,0.9265385085552833,0.004413376428883046,5 |
| scGPT,512,0.0,best,True,$R^2$,0.9457919276996151,0.004807777551547401,5 |
| scGPT,512,0.0,best,True,MSE,0.004773886534277778,0.00034083194432034153,5 |
| scGPT,512,0.0,best,True,Energy distance,1.739100553134032,0.06701624273090624,5 |
| scGPT,512,0.0,best,True,MMD-RBF,0.15005734308690657,0.004854429860658193,5 |
| scGPT,512,0.0,best,True,Pearson delta,0.45325729060955056,0.016111493458592547,5 |
| scGPT,512,0.0,best,True,KNN purity (k=10),0.5705590323460973,0.010066352779043525,5 |
| scGPT,512,0.0,best,True,KNN purity (normalized),0.6625059211857923,0.03292989028502918,5 |
| scGPT,512,0.0,best,True,Pathway Spearman,0.9329833788444132,0.010290346779372772,5 |
| scGPT,512,0.0,best,True,Coexpression Spearman,0.8712313933680436,0.003593037491316708,5 |
| scGPT,512,0.0,best,True,Cell-cycle (same phase),0.34664985031177414,0.006154921378287757,5 |
| scGPT,512,0.0,best,True,DEG dice@100 (pred),0.08509271181553316,0.008613349746441757,5 |
| scGPT,512,0.0,best,True,Mean gene-diff Spearman,0.18724502052221526,0.01917894411047054,5 |
| scGPT,512,0.0,best,True,Cytokine Spearman,0.9019637085344921,0.00820809883287652,5 |
| scConcept,512,0.0,best,True,$R^2$,0.876162438603723,0.009972876631528986,5 |
| scConcept,512,0.0,best,True,MSE,0.010794458649914934,0.0005225384781187557,5 |
| scConcept,512,0.0,best,True,Energy distance,1.723146489354903,0.08929440605665208,5 |
| scConcept,512,0.0,best,True,MMD-RBF,0.09324407585043,0.0037914040378698283,5 |
| scConcept,512,0.0,best,True,Pearson delta,0.24811367241965057,0.018186602661718072,5 |
| scConcept,512,0.0,best,True,KNN purity (k=10),0.500826354056843,0.010091950142782458,5 |
| scConcept,512,0.0,best,True,KNN purity (normalized),0.41399413823844045,0.020366705033523193,5 |
| scConcept,512,0.0,best,True,Pathway Spearman,0.8717939567894757,0.023495199654807262,5 |
| scConcept,512,0.0,best,True,Coexpression Spearman,0.8995689185491113,0.0032290045878949954,5 |
| scConcept,512,0.0,best,True,Cell-cycle (same phase),0.34265958810127134,0.006313262373268562,5 |
| scConcept,512,0.0,best,True,DEG dice@100 (pred),0.04917752687886055,0.005292381948632604,5 |
| scConcept,512,0.0,best,True,Mean gene-diff Spearman,0.08944145379249571,0.010950160043763053,5 |
| scConcept,512,0.0,best,True,Cytokine Spearman,0.8757161100564114,0.004150840561670105,5 |
| scimilarity,128,0.0,best,True,$R^2$,0.7388861544690695,0.022915416728441378,5 |
| scimilarity,128,0.0,best,True,MSE,0.021725246430060085,0.0016315161293598837,5 |
| scimilarity,128,0.0,best,True,Energy distance,4.418626201335071,0.3245889957642923,5 |
| scimilarity,128,0.0,best,True,MMD-RBF,0.23114982145032759,0.007563570685885747,5 |
| scimilarity,128,0.0,best,True,Pearson delta,0.23876170033649968,0.016957155801863015,5 |
| scimilarity,128,0.0,best,True,KNN purity (k=10),0.5340318331798855,0.014913397388115202,5 |
| scimilarity,128,0.0,best,True,KNN purity (normalized),0.5829541621734189,0.06281729831752239,5 |
| scimilarity,128,0.0,best,True,Pathway Spearman,0.8157423744437393,0.023788127276617162,5 |
| scimilarity,128,0.0,best,True,Coexpression Spearman,0.8460121210228373,0.0026494392032515245,5 |
| scimilarity,128,0.0,best,True,Cell-cycle (same phase),0.3346237598689669,0.005877920192771646,5 |
| scimilarity,128,0.0,best,True,DEG dice@100 (pred),0.04960634831789315,0.006490640353100444,5 |
| scimilarity,128,0.0,best,True,Mean gene-diff Spearman,0.08408700624236344,0.008450882863315527,5 |
| scimilarity,128,0.0,best,True,Cytokine Spearman,0.8527106391183263,0.009619229042837985,5 |
| AE,10,0.1,best,False,$R^2$,0.544379363675963,0.0214562557886637,5 |
| AE,10,0.1,best,False,MSE,0.04461273224942895,0.0026671231579298072,5 |
| AE,10,0.1,best,False,Energy distance,13.846927422697055,0.6710045848856455,5 |
| AE,10,0.1,best,False,MMD-RBF,0.5109926456907078,0.013031653679133596,5 |
| AE,10,0.1,best,False,Pearson delta,0.101530481132538,0.01840164684635375,5 |
| AE,10,0.1,best,False,KNN purity (k=10),0.4783214791036806,0.013435772492168352,5 |
| AE,10,0.1,best,False,KNN purity (normalized),0.3251653270078675,0.0993802031263862,5 |
| AE,10,0.1,best,False,Pathway Spearman,0.5558251310728128,0.02630959936256132,5 |
| AE,10,0.1,best,False,Coexpression Spearman,0.7767898997257294,0.0031559806101487107,5 |
| AE,10,0.1,best,False,Cell-cycle (same phase),0.33064834846477087,0.008606469170553837,5 |
| AE,10,0.1,best,False,DEG dice@100 (pred),0.012975988952069112,0.0005347710912864087,5 |
| AE,10,0.1,best,False,Mean gene-diff Spearman,0.008691158509765779,0.004891961733058975,5 |
| AE,10,0.1,best,False,Cytokine Spearman,0.6708688393296149,0.020643340906743815,5 |
| AE,32,0.1,best,False,$R^2$,0.741883177578198,0.006675343992311542,5 |
| AE,32,0.1,best,False,MSE,0.02500843960872316,0.0013677832886520855,5 |
| AE,32,0.1,best,False,Energy distance,7.148313604683781,0.49128486417258277,5 |
| AE,32,0.1,best,False,MMD-RBF,0.31314635854671397,0.014379456043653059,5 |
| AE,32,0.1,best,False,Pearson delta,0.15546466301653594,0.022413419074972084,5 |
| AE,32,0.1,best,False,KNN purity (k=10),0.4793102902492035,0.01622571511569289,5 |
| AE,32,0.1,best,False,KNN purity (normalized),0.32057979345853693,0.0767943585171203,5 |
| AE,32,0.1,best,False,Pathway Spearman,0.7015272553268048,0.02114223366282,5 |
| AE,32,0.1,best,False,Coexpression Spearman,0.816116813561781,0.006594133871458208,5 |
| AE,32,0.1,best,False,Cell-cycle (same phase),0.3461333472703162,0.0008227247744947019,5 |
| AE,32,0.1,best,False,DEG dice@100 (pred),0.018452406687373874,0.0021637428885911618,5 |
| AE,32,0.1,best,False,Mean gene-diff Spearman,0.007232173374155637,0.004950532785334691,5 |
| AE,32,0.1,best,False,Cytokine Spearman,0.7688616508004428,0.004534965591445642,5 |
| AE,128,0.1,best,False,$R^2$,0.8103926995883395,0.00993496321265966,5 |
| AE,128,0.1,best,False,MSE,0.016222885634466132,0.00033479991640414673,5 |
| AE,128,0.1,best,False,Energy distance,2.3405408295244663,0.0334407876387752,5 |
| AE,128,0.1,best,False,MMD-RBF,0.15270177225342804,0.002760160896475848,5 |
| AE,128,0.1,best,False,Pearson delta,0.21424670905917428,0.011263143964498432,5 |
| AE,128,0.1,best,False,KNN purity (k=10),0.5163100888985037,0.005698539676288261,5 |
| AE,128,0.1,best,False,KNN purity (normalized),0.46022560859530814,0.025729694241809535,5 |
| AE,128,0.1,best,False,Pathway Spearman,0.8319142986951367,0.013347650939880678,5 |
| AE,128,0.1,best,False,Coexpression Spearman,0.8404507536936923,0.004584339705825126,5 |
| AE,128,0.1,best,False,Cell-cycle (same phase),0.34176006233121065,0.007760043080130648,5 |
| AE,128,0.1,best,False,DEG dice@100 (pred),0.04641024538934065,0.004785980648148464,5 |
| AE,128,0.1,best,False,Mean gene-diff Spearman,0.11220398600115819,0.022367952307852813,5 |
| AE,128,0.1,best,False,Cytokine Spearman,0.8611029821572229,0.003429684443803762,5 |
| AE,512,0.1,best,False,$R^2$,0.8870731117501984,0.005556732742062834,5 |
| AE,512,0.1,best,False,MSE,0.009937593090593642,0.00042051264265117734,5 |
| AE,512,0.1,best,False,Energy distance,1.8228731444081867,0.08521332858606981,5 |
| AE,512,0.1,best,False,MMD-RBF,0.12579675326763645,0.004630903109197834,5 |
| AE,512,0.1,best,False,Pearson delta,0.246368948986141,0.016513023259294806,5 |
| AE,512,0.1,best,False,KNN purity (k=10),0.4881745340932887,0.00903558806365899,5 |
| AE,512,0.1,best,False,KNN purity (normalized),0.3982241396899947,0.045418458053977095,5 |
| AE,512,0.1,best,False,Pathway Spearman,0.8605287141789588,0.020787531687492453,5 |
| AE,512,0.1,best,False,Coexpression Spearman,0.9185692511037076,0.0017619964455809266,5 |
| AE,512,0.1,best,False,Cell-cycle (same phase),0.33412249721836423,0.003422500932810657,5 |
| AE,512,0.1,best,False,DEG dice@100 (pred),0.02952998692948843,0.002868530249347301,5 |
| AE,512,0.1,best,False,Mean gene-diff Spearman,0.08263334391572641,0.017123175310767316,5 |
| AE,512,0.1,best,False,Cytokine Spearman,0.873354068148139,0.005031048633927848,5 |
| AE,2048,0.1,best,False,$R^2$,0.9186497473072907,0.005731076847835633,5 |
| AE,2048,0.1,best,False,MSE,0.007172123839128524,0.00030720722788793735,5 |
| AE,2048,0.1,best,False,Energy distance,1.847907057301759,0.038603848494461364,5 |
| AE,2048,0.1,best,False,MMD-RBF,0.12796785372142197,0.004327600377011678,5 |
| AE,2048,0.1,best,False,Pearson delta,0.38218719772922505,0.01886999155050919,5 |
| AE,2048,0.1,best,False,KNN purity (k=10),0.533569845691902,0.00560347938016595,5 |
| AE,2048,0.1,best,False,KNN purity (normalized),0.5306958345200646,0.023994129272114303,5 |
| AE,2048,0.1,best,False,Pathway Spearman,0.9108662154329616,0.015042685203283343,5 |
| AE,2048,0.1,best,False,Coexpression Spearman,0.9443663688995935,0.0008436517497226085,5 |
| AE,2048,0.1,best,False,Cell-cycle (same phase),0.3416824599943504,0.0025584806907958625,5 |
| AE,2048,0.1,best,False,DEG dice@100 (pred),0.059476196707877425,0.00767303007808695,5 |
| AE,2048,0.1,best,False,Mean gene-diff Spearman,0.14323550284023756,0.018098220616798805,5 |
| AE,2048,0.1,best,False,Cytokine Spearman,0.9036073623603247,0.006126122956490805,5 |
| nlscVI,10,0.1,best,False,$R^2$,0.5524081372964427,0.026657211440092282,5 |
| nlscVI,10,0.1,best,False,MSE,0.042170284825050273,0.0018775497096458738,5 |
| nlscVI,10,0.1,best,False,Energy distance,13.048005040463039,0.4257035614490277,5 |
| nlscVI,10,0.1,best,False,MMD-RBF,0.5766890561368019,0.01912875004342163,5 |
| nlscVI,10,0.1,best,False,Pearson delta,0.13749454100295394,0.016004992465223234,5 |
| nlscVI,10,0.1,best,False,KNN purity (k=10),0.5007041720572502,0.01792475509962595,5 |
| nlscVI,10,0.1,best,False,KNN purity (normalized),0.4693176568368794,0.10586134418318623,5 |
| nlscVI,10,0.1,best,False,Pathway Spearman,0.6147574894963267,0.031272022904669225,5 |
| nlscVI,10,0.1,best,False,Coexpression Spearman,0.7438407000799259,0.005393176978829879,5 |
| nlscVI,10,0.1,best,False,Cell-cycle (same phase),0.33988782994378114,0.006414111996799064,5 |
| nlscVI,10,0.1,best,False,DEG dice@100 (pred),0.02128845669986787,0.002349422673411877,5 |
| nlscVI,10,0.1,best,False,Mean gene-diff Spearman,0.002476215619051315,0.013838055986381142,5 |
| nlscVI,10,0.1,best,False,Cytokine Spearman,0.7405213044707827,0.015447688635331766,5 |
| nlscVI,32,0.1,best,False,$R^2$,0.8231507010838633,0.006407593061443092,5 |
| nlscVI,32,0.1,best,False,MSE,0.016332312898585246,0.0005258921118190741,5 |
| nlscVI,32,0.1,best,False,Energy distance,4.759896541993919,0.1055559392325529,5 |
| nlscVI,32,0.1,best,False,MMD-RBF,0.2244485998036562,0.006634301983027717,5 |
| nlscVI,32,0.1,best,False,Pearson delta,0.2230190362273993,0.020741354148822083,5 |
| nlscVI,32,0.1,best,False,KNN purity (k=10),0.4987277258128106,0.010555505435739082,5 |
| nlscVI,32,0.1,best,False,KNN purity (normalized),0.4383771809330012,0.06775030597941119,5 |
| nlscVI,32,0.1,best,False,Pathway Spearman,0.7646233709171101,0.026806122068253013,5 |
| nlscVI,32,0.1,best,False,Coexpression Spearman,0.812823966890633,0.00320121866423477,5 |
| nlscVI,32,0.1,best,False,Cell-cycle (same phase),0.3491677709365776,0.00877106756080993,5 |
| nlscVI,32,0.1,best,False,DEG dice@100 (pred),0.033419030023066246,0.006680534018718226,5 |
| nlscVI,32,0.1,best,False,Mean gene-diff Spearman,0.05395626528401128,0.014307255761978518,5 |
| nlscVI,32,0.1,best,False,Cytokine Spearman,0.8316465309093152,0.009357722957576928,5 |
| nlscVI,128,0.1,best,False,$R^2$,0.9217350878503991,0.004299239745710346,5 |
| nlscVI,128,0.1,best,False,MSE,0.0069456649636140426,0.00032166899156019647,5 |
| nlscVI,128,0.1,best,False,Energy distance,1.7538886524640436,0.05216837600378307,5 |
| nlscVI,128,0.1,best,False,MMD-RBF,0.11104432594347229,0.004007767406070985,5 |
| nlscVI,128,0.1,best,False,Pearson delta,0.3427079681137329,0.018981599016326685,5 |
| nlscVI,128,0.1,best,False,KNN purity (k=10),0.513585181708392,0.0071798228224244035,5 |
| nlscVI,128,0.1,best,False,KNN purity (normalized),0.4840870240408881,0.024515933488018473,5 |
| nlscVI,128,0.1,best,False,Pathway Spearman,0.9012119809053576,0.021369755978719814,5 |
| nlscVI,128,0.1,best,False,Coexpression Spearman,0.8443457367005646,0.0024015856931508327,5 |
| nlscVI,128,0.1,best,False,Cell-cycle (same phase),0.34294292983748226,0.0035677052253512663,5 |
| nlscVI,128,0.1,best,False,DEG dice@100 (pred),0.06780454774390392,0.009130293225868764,5 |
| nlscVI,128,0.1,best,False,Mean gene-diff Spearman,0.1589880115549948,0.02807180644667458,5 |
| nlscVI,128,0.1,best,False,Cytokine Spearman,0.9005368043075925,0.0038405697383259076,5 |
| nlscVI,512,0.1,best,False,$R^2$,0.9298335272648399,0.0033153968849218,5 |
| nlscVI,512,0.1,best,False,MSE,0.006336449002028609,0.0003089860356746872,5 |
| nlscVI,512,0.1,best,False,Energy distance,2.022993477116446,0.09226020780272258,5 |
| nlscVI,512,0.1,best,False,MMD-RBF,0.11529520661708112,0.0045680377483869146,5 |
| nlscVI,512,0.1,best,False,Pearson delta,0.36160853571587354,0.010494236307997649,5 |
| nlscVI,512,0.1,best,False,KNN purity (k=10),0.5041923675299389,0.0034107915859478886,5 |
| nlscVI,512,0.1,best,False,KNN purity (normalized),0.4577492015688779,0.024017896194983304,5 |
| nlscVI,512,0.1,best,False,Pathway Spearman,0.9119736378582927,0.015830580594520853,5 |
| nlscVI,512,0.1,best,False,Coexpression Spearman,0.8720749094986557,0.002474082726283803,5 |
| nlscVI,512,0.1,best,False,Cell-cycle (same phase),0.3416743912271884,0.00672456124813988,5 |
| nlscVI,512,0.1,best,False,DEG dice@100 (pred),0.07269108550186751,0.008021365829182461,5 |
| nlscVI,512,0.1,best,False,Mean gene-diff Spearman,0.15225072775265341,0.027421196157352272,5 |
| nlscVI,512,0.1,best,False,Cytokine Spearman,0.9013876750382371,0.002528310735104681,5 |
| nlscVI,2048,0.1,best,False,$R^2$,0.9419694436152921,0.004575878373186888,5 |
| nlscVI,2048,0.1,best,False,MSE,0.0051996803709340915,0.0003129848332989982,5 |
| nlscVI,2048,0.1,best,False,Energy distance,3.096826003612521,0.049501034650493526,5 |
| nlscVI,2048,0.1,best,False,MMD-RBF,0.18759718672365808,0.005940425290982548,5 |
| nlscVI,2048,0.1,best,False,Pearson delta,0.3927656431780505,0.012962804300028651,5 |
| nlscVI,2048,0.1,best,False,KNN purity (k=10),0.5042946909673096,0.004759551887312186,5 |
| nlscVI,2048,0.1,best,False,KNN purity (normalized),0.4358020983452519,0.03347454830225903,5 |
| nlscVI,2048,0.1,best,False,Pathway Spearman,0.9130564419190108,0.0189190136018876,5 |
| nlscVI,2048,0.1,best,False,Coexpression Spearman,0.920393411725352,0.0020466537462382793,5 |
| nlscVI,2048,0.1,best,False,Cell-cycle (same phase),0.3356604169122829,0.00430961935049381,5 |
| nlscVI,2048,0.1,best,False,DEG dice@100 (pred),0.0628785438791268,0.008040277468921019,5 |
| nlscVI,2048,0.1,best,False,Mean gene-diff Spearman,0.12880509381439048,0.023410050188132282,5 |
| nlscVI,2048,0.1,best,False,Cytokine Spearman,0.9029838968725455,0.004773514852304581,5 |
| PCA,10,0.1,best,False,$R^2$,0.6649148989445753,0.016400738698218145,5 |
| PCA,10,0.1,best,False,MSE,0.03162976450447379,0.0010911168108433656,5 |
| PCA,10,0.1,best,False,Energy distance,15.3812777047244,0.3741007692129233,5 |
| PCA,10,0.1,best,False,MMD-RBF,0.9017638176580359,0.0165515652723255,5 |
| PCA,10,0.1,best,False,Pearson delta,0.14283577475129886,0.01614130562674075,5 |
| PCA,10,0.1,best,False,KNN purity (k=10),0.5004172456962859,0.027976417261343433,5 |
| PCA,10,0.1,best,False,KNN purity (normalized),0.38697619784100407,0.16535489107155932,5 |
| PCA,10,0.1,best,False,Pathway Spearman,0.6695817970519313,0.03791428134878073,5 |
| PCA,10,0.1,best,False,Coexpression Spearman,0.5027486802305947,0.001757373763681759,5 |
| PCA,10,0.1,best,False,Cell-cycle (same phase),0.3646422274702715,0.00733479283601859,5 |
| PCA,10,0.1,best,False,DEG dice@100 (pred),0.01853146207554795,0.0011066781514893636,5 |
| PCA,10,0.1,best,False,Mean gene-diff Spearman,0.016440005068016027,0.0043556945968367886,5 |
| PCA,10,0.1,best,False,Cytokine Spearman,0.7434717378297836,0.011756505164140738,5 |
| PCA,32,0.1,best,False,$R^2$,0.8286165548444474,0.006998065624745065,5 |
| PCA,32,0.1,best,False,MSE,0.017458213198278207,0.0012176029947757996,5 |
| PCA,32,0.1,best,False,Energy distance,5.960514423517039,0.24885314232233904,5 |
| PCA,32,0.1,best,False,MMD-RBF,0.32672132300418266,0.014408970296978093,5 |
| PCA,32,0.1,best,False,Pearson delta,0.2009153135866418,0.017058767822330727,5 |
| PCA,32,0.1,best,False,KNN purity (k=10),0.4937729711848265,0.0066161937218712445,5 |
| PCA,32,0.1,best,False,KNN purity (normalized),0.36120131671196376,0.04415348305954396,5 |
| PCA,32,0.1,best,False,Pathway Spearman,0.7945527104172695,0.03150605554195396,5 |
| PCA,32,0.1,best,False,Coexpression Spearman,0.781333237623519,0.002209890531359772,5 |
| PCA,32,0.1,best,False,Cell-cycle (same phase),0.34731238008132403,0.006351146959023495,5 |
| PCA,32,0.1,best,False,DEG dice@100 (pred),0.03779955983406269,0.0022522052554497128,5 |
| PCA,32,0.1,best,False,Mean gene-diff Spearman,0.05405878834321763,0.01274943242452013,5 |
| PCA,32,0.1,best,False,Cytokine Spearman,0.8449593747568696,0.0053608893581845365,5 |
| PCA,128,0.1,best,False,$R^2$,0.9261296930844909,0.006223074384520309,5 |
| PCA,128,0.1,best,False,MSE,0.006851623106042018,0.0005265998071818676,5 |
| PCA,128,0.1,best,False,Energy distance,1.6634755947956321,0.041642825854130226,5 |
| PCA,128,0.1,best,False,MMD-RBF,0.11508803731687926,0.00278834036544651,5 |
| PCA,128,0.1,best,False,Pearson delta,0.3477925304182746,0.013341354800213357,5 |
| PCA,128,0.1,best,False,KNN purity (k=10),0.5288766236592186,0.006635257223345545,5 |
| PCA,128,0.1,best,False,KNN purity (normalized),0.5278421153159258,0.024935994527506587,5 |
| PCA,128,0.1,best,False,Pathway Spearman,0.8841116083236201,0.016353954982908824,5 |
| PCA,128,0.1,best,False,Coexpression Spearman,0.8419757089359396,0.0036421715398087307,5 |
| PCA,128,0.1,best,False,Cell-cycle (same phase),0.3441206248366289,0.00570475560484448,5 |
| PCA,128,0.1,best,False,DEG dice@100 (pred),0.06420019982764331,0.00968743503930663,5 |
| PCA,128,0.1,best,False,Mean gene-diff Spearman,0.13508461066524705,0.01522519165403735,5 |
| PCA,128,0.1,best,False,Cytokine Spearman,0.895547509436175,0.009921261697035152,5 |
| PCA,512,0.1,best,False,$R^2$,0.9473104066874134,0.004773773893210482,5 |
| PCA,512,0.1,best,False,MSE,0.004917109030452789,0.00030551056901686254,5 |
| PCA,512,0.1,best,False,Energy distance,1.2525808246810979,0.03990428706271599,5 |
| PCA,512,0.1,best,False,MMD-RBF,0.0947823657319434,0.0018870840327484867,5 |
| PCA,512,0.1,best,False,Pearson delta,0.4706543623020682,0.017364073685578157,5 |
| PCA,512,0.1,best,False,KNN purity (k=10),0.5477204188088741,0.006315137344354593,5 |
| PCA,512,0.1,best,False,KNN purity (normalized),0.5774409383323593,0.02079171357568881,5 |
| PCA,512,0.1,best,False,Pathway Spearman,0.9141620770898233,0.015187645006409527,5 |
| PCA,512,0.1,best,False,Coexpression Spearman,0.9080732544655501,0.003448523998638154,5 |
| PCA,512,0.1,best,False,Cell-cycle (same phase),0.34446733212279934,0.005874521676322261,5 |
| PCA,512,0.1,best,False,DEG dice@100 (pred),0.07426532431645046,0.008769397147790268,5 |
| PCA,512,0.1,best,False,Mean gene-diff Spearman,0.16236100311885537,0.020959767027953262,5 |
| PCA,512,0.1,best,False,Cytokine Spearman,0.8981514591089649,0.004365107623548165,5 |
| PCA,2048,0.1,best,False,$R^2$,0.958701412115022,0.0042995445618855405,5 |
| PCA,2048,0.1,best,False,MSE,0.0038087420796525705,0.00031249607235912146,5 |
| PCA,2048,0.1,best,False,Energy distance,1.0089047910925895,0.035802315849404104,5 |
| PCA,2048,0.1,best,False,MMD-RBF,0.08886557685661264,0.0026039969816335578,5 |
| PCA,2048,0.1,best,False,Pearson delta,0.5469958097604918,0.01694539252330482,5 |
| PCA,2048,0.1,best,False,KNN purity (k=10),0.5550634339842244,0.008349857358411934,5 |
| PCA,2048,0.1,best,False,KNN purity (normalized),0.6056463873824119,0.008225873289338713,5 |
| PCA,2048,0.1,best,False,Pathway Spearman,0.9443307125614192,0.00854413341074179,5 |
| PCA,2048,0.1,best,False,Coexpression Spearman,0.94561474725501,0.0011682249828595223,5 |
| PCA,2048,0.1,best,False,Cell-cycle (same phase),0.3370520886277869,0.005546615339748315,5 |
| PCA,2048,0.1,best,False,DEG dice@100 (pred),0.07961456033589423,0.008195514720632064,5 |
| PCA,2048,0.1,best,False,Mean gene-diff Spearman,0.19161656763575022,0.02192560224099494,5 |
| PCA,2048,0.1,best,False,Cytokine Spearman,0.9187420195558659,0.0037835063194660797,5 |
| SE,2058,0.1,best,True,$R^2$,0.9298666060297464,0.004839380309430657,5 |
| SE,2058,0.1,best,True,MSE,0.0060823674335579465,0.0002611453261604913,5 |
| SE,2058,0.1,best,True,Energy distance,0.8898774364167764,0.0537816865482438,5 |
| SE,2058,0.1,best,True,MMD-RBF,0.04878278057122877,0.0026460378767020854,5 |
| SE,2058,0.1,best,True,Pearson delta,0.436926355945507,0.014324330181897795,5 |
| SE,2058,0.1,best,True,KNN purity (k=10),0.5747329005692512,0.009147598796288502,5 |
| SE,2058,0.1,best,True,KNN purity (normalized),0.6978962201838398,0.03019263384503256,5 |
| SE,2058,0.1,best,True,Pathway Spearman,0.9430115168045601,0.009445717825004047,5 |
| SE,2058,0.1,best,True,Coexpression Spearman,0.9336352329282516,0.0015188758353840985,5 |
| SE,2058,0.1,best,True,Cell-cycle (same phase),0.336973352132175,0.0029691871094418335,5 |
| SE,2058,0.1,best,True,DEG dice@100 (pred),0.0927303386335839,0.004376729478842824,5 |
| SE,2058,0.1,best,True,Mean gene-diff Spearman,0.23269871888688698,0.023213811681690316,5 |
| SE,2058,0.1,best,True,Cytokine Spearman,0.9151436481531352,0.006600693967523888,5 |
| scGPT,512,0.1,best,True,$R^2$,0.8680851196049624,0.006898458676199083,5 |
| scGPT,512,0.1,best,True,MSE,0.011051872610011683,0.0002856415812924411,5 |
| scGPT,512,0.1,best,True,Energy distance,2.3702381913649297,0.10205677005614158,5 |
| scGPT,512,0.1,best,True,MMD-RBF,0.1553582454795708,0.006286265843402183,5 |
| scGPT,512,0.1,best,True,Pearson delta,0.3491893410955159,0.01076818801699159,5 |
| scGPT,512,0.1,best,True,KNN purity (k=10),0.5779288813553771,0.006531343150001375,5 |
| scGPT,512,0.1,best,True,KNN purity (normalized),0.7220561698476571,0.04274386780442004,5 |
| scGPT,512,0.1,best,True,Pathway Spearman,0.8991525782034682,0.0200158359966157,5 |
| scGPT,512,0.1,best,True,Coexpression Spearman,0.8370710336187752,0.0022269561202156937,5 |
| scGPT,512,0.1,best,True,Cell-cycle (same phase),0.3393658643536841,0.005854364857445025,5 |
| scGPT,512,0.1,best,True,DEG dice@100 (pred),0.0862379419593462,0.006821422801837309,5 |
| scGPT,512,0.1,best,True,Mean gene-diff Spearman,0.20085344412256972,0.022914210115036315,5 |
| scGPT,512,0.1,best,True,Cytokine Spearman,0.8854757017719745,0.006032019343867466,5 |
| scConcept,512,0.1,best,True,$R^2$,0.844970570545659,0.012242653507408689,5 |
| scConcept,512,0.1,best,True,MSE,0.01338827072220775,0.0005629617300316627,5 |
| scConcept,512,0.1,best,True,Energy distance,2.408957517420563,0.08778768215960635,5 |
| scConcept,512,0.1,best,True,MMD-RBF,0.12337811633181431,0.003920935066285042,5 |
| scConcept,512,0.1,best,True,Pearson delta,0.2817603645469702,0.014589412554894403,5 |
| scConcept,512,0.1,best,True,KNN purity (k=10),0.5450300873516819,0.00916221986508996,5 |
| scConcept,512,0.1,best,True,KNN purity (normalized),0.5705034278375853,0.019880957468924505,5 |
| scConcept,512,0.1,best,True,Pathway Spearman,0.8857199316548364,0.01947613336617187,5 |
| scConcept,512,0.1,best,True,Coexpression Spearman,0.8750810082326472,0.003932895890752967,5 |
| scConcept,512,0.1,best,True,Cell-cycle (same phase),0.34344491581367265,0.008982305216480347,5 |
| scConcept,512,0.1,best,True,DEG dice@100 (pred),0.06300007695229758,0.004940516466597033,5 |
| scConcept,512,0.1,best,True,Mean gene-diff Spearman,0.10096895746611474,0.01029983636937918,5 |
| scConcept,512,0.1,best,True,Cytokine Spearman,0.8647847213050515,0.006057160269347155,5 |
| scimilarity,128,0.1,best,True,$R^2$,0.748937223902392,0.016102159936789037,5 |
| scimilarity,128,0.1,best,True,MSE,0.02258096054474943,0.0007063585215310641,5 |
| scimilarity,128,0.1,best,True,Energy distance,5.403875813221229,0.26538074917179366,5 |
| scimilarity,128,0.1,best,True,MMD-RBF,0.2953502269139332,0.021241772990686164,5 |
| scimilarity,128,0.1,best,True,Pearson delta,0.22092100622158597,0.013626717725009473,5 |
| scimilarity,128,0.1,best,True,KNN purity (k=10),0.5321111776034183,0.0102513949941356,5 |
| scimilarity,128,0.1,best,True,KNN purity (normalized),0.5016601936581072,0.04982858176212959,5 |
| scimilarity,128,0.1,best,True,Pathway Spearman,0.8410687762089664,0.008970064455988176,5 |
| scimilarity,128,0.1,best,True,Coexpression Spearman,0.8289955486158893,0.004330913177942475,5 |
| scimilarity,128,0.1,best,True,Cell-cycle (same phase),0.33101740983352146,0.004584366158636754,5 |
| scimilarity,128,0.1,best,True,DEG dice@100 (pred),0.060642783813438794,0.005739898384294841,5 |
| scimilarity,128,0.1,best,True,Mean gene-diff Spearman,0.08996317723788488,0.016579106857972266,5 |
| scimilarity,128,0.1,best,True,Cytokine Spearman,0.8592348578963385,0.005487407384287828,5 |
| AE,10,0.0,last,False,$R^2$,0.5353656699473229,0.016584586604053066,5 |
| AE,10,0.0,last,False,MSE,0.04687128285199295,0.003264235965769981,5 |
| AE,10,0.0,last,False,Energy distance,14.366395123103434,0.7943115199090115,5 |
| AE,10,0.0,last,False,MMD-RBF,0.5111103085784426,0.008376079204897146,5 |
| AE,10,0.0,last,False,Pearson delta,0.10522716584935636,0.02038200064958018,5 |
| AE,10,0.0,last,False,KNN purity (k=10),0.48432474509024165,0.013559410978303212,5 |
| AE,10,0.0,last,False,KNN purity (normalized),0.3442522434584697,0.10021570216774284,5 |
| AE,10,0.0,last,False,Pathway Spearman,0.5246820771463209,0.030818770820596506,5 |
| AE,10,0.0,last,False,Coexpression Spearman,0.7755949686385026,0.0035658579214490685,5 |
| AE,10,0.0,last,False,Cell-cycle (same phase),0.33285844120996844,0.007295661350748421,5 |
| AE,10,0.0,last,False,DEG dice@100 (pred),0.015484458010423096,0.0030001603720263225,5 |
| AE,10,0.0,last,False,Mean gene-diff Spearman,-0.00714117457154845,0.008800719614586056,5 |
| AE,10,0.0,last,False,Cytokine Spearman,0.6681852381700389,0.02016322216514975,5 |
| AE,32,0.0,last,False,$R^2$,0.7216597584905317,0.0059619430304771815,5 |
| AE,32,0.0,last,False,MSE,0.02605777476251911,0.001008552439062114,5 |
| AE,32,0.0,last,False,Energy distance,7.094074465180199,0.3444026148702169,5 |
| AE,32,0.0,last,False,MMD-RBF,0.2804478283845844,0.009815324369711541,5 |
| AE,32,0.0,last,False,Pearson delta,0.156112176726994,0.014562539407704972,5 |
| AE,32,0.0,last,False,KNN purity (k=10),0.4813123965424646,0.011383436074433196,5 |
| AE,32,0.0,last,False,KNN purity (normalized),0.3499303973218185,0.06804747676650563,5 |
| AE,32,0.0,last,False,Pathway Spearman,0.7102689364856694,0.027289371723829208,5 |
| AE,32,0.0,last,False,Coexpression Spearman,0.8326413368797032,0.006001768144042856,5 |
| AE,32,0.0,last,False,Cell-cycle (same phase),0.34181646848511604,0.006090912332682822,5 |
| AE,32,0.0,last,False,DEG dice@100 (pred),0.020550356443290042,0.003756392254740831,5 |
| AE,32,0.0,last,False,Mean gene-diff Spearman,0.014486069800024159,0.0016221509021572785,5 |
| AE,32,0.0,last,False,Cytokine Spearman,0.778003862824154,0.013328473471266925,5 |
| AE,128,0.0,last,False,$R^2$,0.2444241100509957,0.05539921828049701,5 |
| AE,128,0.0,last,False,MSE,0.0585654653566392,0.0031492684873524863,5 |
| AE,128,0.0,last,False,Energy distance,5.045677053653292,0.13280559609899711,5 |
| AE,128,0.0,last,False,MMD-RBF,0.2005585638335167,0.00390059303273361,5 |
| AE,128,0.0,last,False,Pearson delta,0.12713412769217716,0.003441284471345641,5 |
| AE,128,0.0,last,False,KNN purity (k=10),0.5039649603313896,0.006934900414646001,5 |
| AE,128,0.0,last,False,KNN purity (normalized),0.4261692177764112,0.04390419696558667,5 |
| AE,128,0.0,last,False,Pathway Spearman,0.8070219974144808,0.01589193479265668,5 |
| AE,128,0.0,last,False,Coexpression Spearman,0.8791864098682604,0.002193154829184236,5 |
| AE,128,0.0,last,False,Cell-cycle (same phase),0.34708441317194166,0.0025353347763741947,5 |
| AE,128,0.0,last,False,DEG dice@100 (pred),0.04944409697713751,0.005034660237626513,5 |
| AE,128,0.0,last,False,Mean gene-diff Spearman,0.07535637752849814,0.014337472509884307,5 |
| AE,128,0.0,last,False,Cytokine Spearman,0.8277746141290289,0.008071616619741026,5 |
| AE,512,0.0,last,False,$R^2$,0.5005798721105237,0.03569556400923619,5 |
| AE,512,0.0,last,False,MSE,0.04079561454742916,0.0015311893325504653,5 |
| AE,512,0.0,last,False,Energy distance,3.0815827355891536,0.11603372776972655,5 |
| AE,512,0.0,last,False,MMD-RBF,0.14575042235230423,0.00455854713688397,5 |
| AE,512,0.0,last,False,Pearson delta,0.17345712241388989,0.008706015266607815,5 |
| AE,512,0.0,last,False,KNN purity (k=10),0.5263112097593237,0.005381337703685839,5 |
| AE,512,0.0,last,False,KNN purity (normalized),0.4982723192494373,0.037161670048595795,5 |
| AE,512,0.0,last,False,Pathway Spearman,0.7658481484041488,0.019568875572921824,5 |
| AE,512,0.0,last,False,Coexpression Spearman,0.9166573461053593,0.0027277442504588397,5 |
| AE,512,0.0,last,False,Cell-cycle (same phase),0.3424488642711162,0.0015854760901864646,5 |
| AE,512,0.0,last,False,DEG dice@100 (pred),0.06610456432681781,0.005867201336651509,5 |
| AE,512,0.0,last,False,Mean gene-diff Spearman,0.11705701222149256,0.016762353877180128,5 |
| AE,512,0.0,last,False,Cytokine Spearman,0.803426728618702,0.018247726889253392,5 |
| AE,2048,0.0,last,False,$R^2$,0.8862063986408666,0.007370243009434312,5 |
| AE,2048,0.0,last,False,MSE,0.009598932260238243,0.0003524601935277508,5 |
| AE,2048,0.0,last,False,Energy distance,2.2028558352743484,0.058950825519450765,5 |
| AE,2048,0.0,last,False,MMD-RBF,0.13684083892265914,0.0041680494883294325,5 |
| AE,2048,0.0,last,False,Pearson delta,0.35788775430169456,0.023885955811779044,5 |
| AE,2048,0.0,last,False,KNN purity (k=10),0.5416635180238841,0.007738847344078032,5 |
| AE,2048,0.0,last,False,KNN purity (normalized),0.5592164465306563,0.020550009768638428,5 |
| AE,2048,0.0,last,False,Pathway Spearman,0.9061837453166058,0.014777088939379304,5 |
| AE,2048,0.0,last,False,Coexpression Spearman,0.9453467846449382,0.0016063989037240723,5 |
| AE,2048,0.0,last,False,Cell-cycle (same phase),0.33967507998232277,0.0019520292699731845,5 |
| AE,2048,0.0,last,False,DEG dice@100 (pred),0.07320566676411458,0.006098347199037708,5 |
| AE,2048,0.0,last,False,Mean gene-diff Spearman,0.16558027474440468,0.02100414115100841,5 |
| AE,2048,0.0,last,False,Cytokine Spearman,0.8990815899900898,0.004473795977852653,5 |
| nlscVI,10,0.0,last,False,$R^2$,0.4786945482777244,0.03212785399102144,5 |
| nlscVI,10,0.0,last,False,MSE,0.0490552938584197,0.0022553796111982956,5 |
| nlscVI,10,0.0,last,False,Energy distance,14.147348903377846,0.5244823480662504,5 |
| nlscVI,10,0.0,last,False,MMD-RBF,0.564703671443484,0.016411733003302873,5 |
| nlscVI,10,0.0,last,False,Pearson delta,0.12800457452718447,0.016947152565765806,5 |
| nlscVI,10,0.0,last,False,KNN purity (k=10),0.5160544416807096,0.014359642887009513,5 |
| nlscVI,10,0.0,last,False,KNN purity (normalized),0.5212053495681701,0.0903256422091143,5 |
| nlscVI,10,0.0,last,False,Pathway Spearman,0.5926851071717514,0.028320296688951186,5 |
| nlscVI,10,0.0,last,False,Coexpression Spearman,0.7528770012081571,0.0023503067894657765,5 |
| nlscVI,10,0.0,last,False,Cell-cycle (same phase),0.3371403078516732,0.008379022302254211,5 |
| nlscVI,10,0.0,last,False,DEG dice@100 (pred),0.01649919485232403,0.001969328871885997,5 |
| nlscVI,10,0.0,last,False,Mean gene-diff Spearman,0.009874378911903837,0.014123505918316636,5 |
| nlscVI,10,0.0,last,False,Cytokine Spearman,0.6907909807765351,0.014423438587599929,5 |
| nlscVI,32,0.0,last,False,$R^2$,0.7378850041272997,0.01419448272666264,5 |
| nlscVI,32,0.0,last,False,MSE,0.024059253180791065,0.0014049862255049654,5 |
| nlscVI,32,0.0,last,False,Energy distance,6.7873655306917415,0.3710606517616197,5 |
| nlscVI,32,0.0,last,False,MMD-RBF,0.254938916131392,0.010332591949627433,5 |
| nlscVI,32,0.0,last,False,Pearson delta,0.19211232845773943,0.014256013075714571,5 |
| nlscVI,32,0.0,last,False,KNN purity (k=10),0.5090453475756712,0.011918824113970782,5 |
| nlscVI,32,0.0,last,False,KNN purity (normalized),0.4745778616134775,0.0760312520355724,5 |
| nlscVI,32,0.0,last,False,Pathway Spearman,0.7087964449572096,0.03645564699069254,5 |
| nlscVI,32,0.0,last,False,Coexpression Spearman,0.8224077252338315,0.0015887770754239889,5 |
| nlscVI,32,0.0,last,False,Cell-cycle (same phase),0.35892770615695335,0.008137030283953958,5 |
| nlscVI,32,0.0,last,False,DEG dice@100 (pred),0.031069146567493284,0.005432471189213912,5 |
| nlscVI,32,0.0,last,False,Mean gene-diff Spearman,0.03995319145580825,0.0036142900946903142,5 |
| nlscVI,32,0.0,last,False,Cytokine Spearman,0.7866977385142787,0.008663405052979405,5 |
| nlscVI,128,0.0,last,False,$R^2$,0.9155448654020331,0.003946980425118402,5 |
| nlscVI,128,0.0,last,False,MSE,0.007773653524102775,0.0005449621176335145,5 |
| nlscVI,128,0.0,last,False,Energy distance,1.7874637885842872,0.13635732987882979,5 |
| nlscVI,128,0.0,last,False,MMD-RBF,0.09361500528071579,0.00616296555298415,5 |
| nlscVI,128,0.0,last,False,Pearson delta,0.293403132003485,0.023937578337044033,5 |
| nlscVI,128,0.0,last,False,KNN purity (k=10),0.4928660070016351,0.008819389779784501,5 |
| nlscVI,128,0.0,last,False,KNN purity (normalized),0.41368885240809067,0.05063083716350619,5 |
| nlscVI,128,0.0,last,False,Pathway Spearman,0.8578239690881571,0.029914378678322865,5 |
| nlscVI,128,0.0,last,False,Coexpression Spearman,0.8492964550300091,0.0018340393314040982,5 |
| nlscVI,128,0.0,last,False,Cell-cycle (same phase),0.3489529171778899,0.006647935391040602,5 |
| nlscVI,128,0.0,last,False,DEG dice@100 (pred),0.04937005085454819,0.007567979058451172,5 |
| nlscVI,128,0.0,last,False,Mean gene-diff Spearman,0.10358213581428614,0.021474321155785327,5 |
| nlscVI,128,0.0,last,False,Cytokine Spearman,0.8896521046502434,0.009008446725889763,5 |
| nlscVI,512,0.0,last,False,$R^2$,0.9205514328614053,0.004969266142816994,5 |
| nlscVI,512,0.0,last,False,MSE,0.007312450957045888,0.00034907667015310307,5 |
| nlscVI,512,0.0,last,False,Energy distance,1.7306401868540817,0.08720933433837041,5 |
| nlscVI,512,0.0,last,False,MMD-RBF,0.10004051049431725,0.0052545359436340635,5 |
| nlscVI,512,0.0,last,False,Pearson delta,0.2704971375637009,0.004379836111793402,5 |
| nlscVI,512,0.0,last,False,KNN purity (k=10),0.4643379232150712,0.006334895584217079,5 |
| nlscVI,512,0.0,last,False,KNN purity (normalized),0.3596545807061373,0.025594377271606353,5 |
| nlscVI,512,0.0,last,False,Pathway Spearman,0.8807334457071286,0.026332108327338063,5 |
| nlscVI,512,0.0,last,False,Coexpression Spearman,0.875967449757281,0.0021964518469220636,5 |
| nlscVI,512,0.0,last,False,Cell-cycle (same phase),0.3415448624079791,0.004664827737987481,5 |
| nlscVI,512,0.0,last,False,DEG dice@100 (pred),0.06350864887699428,0.010055846117757216,5 |
| nlscVI,512,0.0,last,False,Mean gene-diff Spearman,0.049267509275592675,0.014158235381324012,5 |
| nlscVI,512,0.0,last,False,Cytokine Spearman,0.8756075550479911,0.0038830405527753766,5 |
| nlscVI,2048,0.0,last,False,$R^2$,0.9359314678018421,0.004645074912377673,5 |
| nlscVI,2048,0.0,last,False,MSE,0.005539750906364366,0.00017031219238923997,5 |
| nlscVI,2048,0.0,last,False,Energy distance,2.808934747049925,0.08556276667680014,5 |
| nlscVI,2048,0.0,last,False,MMD-RBF,0.1667150778386321,0.005004454665375641,5 |
| nlscVI,2048,0.0,last,False,Pearson delta,0.39345600450448465,0.015206906674203352,5 |
| nlscVI,2048,0.0,last,False,KNN purity (k=10),0.511517328104155,0.005252888896051159,5 |
| nlscVI,2048,0.0,last,False,KNN purity (normalized),0.4527882083190543,0.04042775973115302,5 |
| nlscVI,2048,0.0,last,False,Pathway Spearman,0.9075444265981556,0.010015822083965151,5 |
| nlscVI,2048,0.0,last,False,Coexpression Spearman,0.9114148705946746,0.00166467049726672,5 |
| nlscVI,2048,0.0,last,False,Cell-cycle (same phase),0.33773506471693965,0.005914608229503317,5 |
| nlscVI,2048,0.0,last,False,DEG dice@100 (pred),0.0749548196437512,0.01061279045728308,5 |
| nlscVI,2048,0.0,last,False,Mean gene-diff Spearman,0.14796568490765033,0.019946631195651175,5 |
| nlscVI,2048,0.0,last,False,Cytokine Spearman,0.9024692680590893,0.005089593078877723,5 |
| PCA,10,0.0,last,False,$R^2$,0.671119404289011,0.015512775322365682,5 |
| PCA,10,0.0,last,False,MSE,0.03159500210035586,0.0012525639086996515,5 |
| PCA,10,0.0,last,False,Energy distance,14.852256447597682,0.37132270967321984,5 |
| PCA,10,0.0,last,False,MMD-RBF,0.8532907063960987,0.014281697828962756,5 |
| PCA,10,0.0,last,False,Pearson delta,0.13711746151827411,0.020000175448830013,5 |
| PCA,10,0.0,last,False,KNN purity (k=10),0.4922268436430096,0.032018754488628384,5 |
| PCA,10,0.0,last,False,KNN purity (normalized),0.3601841638958728,0.17782627372972695,5 |
| PCA,10,0.0,last,False,Pathway Spearman,0.6456327318555518,0.04175679516338217,5 |
| PCA,10,0.0,last,False,Coexpression Spearman,0.5027494375333272,0.0017556180662863235,5 |
| PCA,10,0.0,last,False,Cell-cycle (same phase),0.37766965514849193,0.008682356207282273,5 |
| PCA,10,0.0,last,False,DEG dice@100 (pred),0.018186418612593753,0.001775855688207936,5 |
| PCA,10,0.0,last,False,Mean gene-diff Spearman,0.02845433643062568,0.003899123322851771,5 |
| PCA,10,0.0,last,False,Cytokine Spearman,0.7336632062315557,0.01744576061203133,5 |
| PCA,32,0.0,last,False,$R^2$,0.8301617956980649,0.006641664158287063,5 |
| PCA,32,0.0,last,False,MSE,0.01720606743043377,0.0011191520064314094,5 |
| PCA,32,0.0,last,False,Energy distance,7.424553461846523,0.3060464395581609,5 |
| PCA,32,0.0,last,False,MMD-RBF,0.4915597419645893,0.011409098727194547,5 |
| PCA,32,0.0,last,False,Pearson delta,0.2148705748322146,0.021504139189965882,5 |
| PCA,32,0.0,last,False,KNN purity (k=10),0.512535908916631,0.007246321266712613,5 |
| PCA,32,0.0,last,False,KNN purity (normalized),0.4274781984927986,0.04577876623289757,5 |
| PCA,32,0.0,last,False,Pathway Spearman,0.7827607460792654,0.025381447102710963,5 |
| PCA,32,0.0,last,False,Coexpression Spearman,0.7490984282146551,0.0031652744081249896,5 |
| PCA,32,0.0,last,False,Cell-cycle (same phase),0.34566236217629553,0.004601064270040738,5 |
| PCA,32,0.0,last,False,DEG dice@100 (pred),0.026509770235928286,0.0055313139863376656,5 |
| PCA,32,0.0,last,False,Mean gene-diff Spearman,0.06979206838613772,0.014985891803203467,5 |
| PCA,32,0.0,last,False,Cytokine Spearman,0.8441341101464701,0.0068842479778736245,5 |
| PCA,128,0.0,last,False,$R^2$,0.9262549940967556,0.006372016569481926,5 |
| PCA,128,0.0,last,False,MSE,0.006821001723322448,0.0005628574527836873,5 |
| PCA,128,0.0,last,False,Energy distance,1.763205174434982,0.08477505727179888,5 |
| PCA,128,0.0,last,False,MMD-RBF,0.12966297903465027,0.005237434457186857,5 |
| PCA,128,0.0,last,False,Pearson delta,0.35901133946310065,0.016299445822534175,5 |
| PCA,128,0.0,last,False,KNN purity (k=10),0.5350865162336208,0.00995612926124398,5 |
| PCA,128,0.0,last,False,KNN purity (normalized),0.5468316325463938,0.03523345871056765,5 |
| PCA,128,0.0,last,False,Pathway Spearman,0.8977780578792176,0.014517194545814112,5 |
| PCA,128,0.0,last,False,Coexpression Spearman,0.8361840156338516,0.0044379699310827265,5 |
| PCA,128,0.0,last,False,Cell-cycle (same phase),0.34854568002522224,0.0068568091383121145,5 |
| PCA,128,0.0,last,False,DEG dice@100 (pred),0.06001467072644673,0.009886711771855192,5 |
| PCA,128,0.0,last,False,Mean gene-diff Spearman,0.14817847825153566,0.022586579866450154,5 |
| PCA,128,0.0,last,False,Cytokine Spearman,0.9011856444325893,0.005127301799116078,5 |
| PCA,512,0.0,last,False,$R^2$,0.9261522631461547,0.0057009938662750045,5 |
| PCA,512,0.0,last,False,MSE,0.006647320600732016,0.0004087719386919172,5 |
| PCA,512,0.0,last,False,Energy distance,1.6510950162699323,0.03240013134358909,5 |
| PCA,512,0.0,last,False,MMD-RBF,0.11320398009963244,0.0030454593431040664,5 |
| PCA,512,0.0,last,False,Pearson delta,0.3970863884363502,0.01993069463919355,5 |
| PCA,512,0.0,last,False,KNN purity (k=10),0.5432478283802302,0.007137567681477765,5 |
| PCA,512,0.0,last,False,KNN purity (normalized),0.5490891074955858,0.02204410017381949,5 |
| PCA,512,0.0,last,False,Pathway Spearman,0.9087362179824664,0.015720801731046573,5 |
| PCA,512,0.0,last,False,Coexpression Spearman,0.9037442961224567,0.0024729842442811146,5 |
| PCA,512,0.0,last,False,Cell-cycle (same phase),0.33928832030391615,0.004947257077355108,5 |
| PCA,512,0.0,last,False,DEG dice@100 (pred),0.06862482043362253,0.006431491022662269,5 |
| PCA,512,0.0,last,False,Mean gene-diff Spearman,0.1250522658269109,0.024316209446878304,5 |
| PCA,512,0.0,last,False,Cytokine Spearman,0.8949271242783535,0.0026172868447133417,5 |
| PCA,2048,0.0,last,False,$R^2$,0.9524711844517819,0.003941761456076363,5 |
| PCA,2048,0.0,last,False,MSE,0.004301168082895573,0.0002799288271939384,5 |
| PCA,2048,0.0,last,False,Energy distance,1.2251880917895466,0.03503752373982367,5 |
| PCA,2048,0.0,last,False,MMD-RBF,0.10548169040162896,0.003718358057755043,5 |
| PCA,2048,0.0,last,False,Pearson delta,0.49685926382856965,0.02217041147162624,5 |
| PCA,2048,0.0,last,False,KNN purity (k=10),0.5464005150892774,0.006060525491290343,5 |
| PCA,2048,0.0,last,False,KNN purity (normalized),0.567252163766659,0.007466971961766996,5 |
| PCA,2048,0.0,last,False,Pathway Spearman,0.9360122600708332,0.013437113632462793,5 |
| PCA,2048,0.0,last,False,Coexpression Spearman,0.9460607340410929,0.0023089939856120595,5 |
| PCA,2048,0.0,last,False,Cell-cycle (same phase),0.33775566894859155,0.00454032032670439,5 |
| PCA,2048,0.0,last,False,DEG dice@100 (pred),0.07387660221331918,0.007934636215577164,5 |
| PCA,2048,0.0,last,False,Mean gene-diff Spearman,0.16810435955978337,0.021563535819776655,5 |
| PCA,2048,0.0,last,False,Cytokine Spearman,0.9130380046575868,0.005064581547692702,5 |
| SE,2058,0.0,last,True,$R^2$,0.9618142669418089,0.0034934442860683657,5 |
| SE,2058,0.0,last,True,MSE,0.0033893369704151,0.000254474304241523,5 |
| SE,2058,0.0,last,True,Energy distance,0.5383200507291275,0.054117174867532515,5 |
| SE,2058,0.0,last,True,MMD-RBF,0.03628651878260393,0.003284565527832803,5 |
| SE,2058,0.0,last,True,Pearson delta,0.5248468985673932,0.013922675029202561,5 |
| SE,2058,0.0,last,True,KNN purity (k=10),0.5559644599225808,0.0078730425419429,5 |
| SE,2058,0.0,last,True,KNN purity (normalized),0.6024982970544714,0.025902876462077878,5 |
| SE,2058,0.0,last,True,Pathway Spearman,0.9461933544269963,0.009725698378656908,5 |
| SE,2058,0.0,last,True,Coexpression Spearman,0.9427524128837721,0.0020893434919982993,5 |
| SE,2058,0.0,last,True,Cell-cycle (same phase),0.3372554567011856,0.005348909814250639,5 |
| SE,2058,0.0,last,True,DEG dice@100 (pred),0.09813127640608318,0.007561273631103856,5 |
| SE,2058,0.0,last,True,Mean gene-diff Spearman,0.2514584824657428,0.027267417782213487,5 |
| SE,2058,0.0,last,True,Cytokine Spearman,0.9265385085552833,0.004413376428883046,5 |
| scGPT,512,0.0,last,True,$R^2$,0.9457919276996151,0.004807777551547401,5 |
| scGPT,512,0.0,last,True,MSE,0.004773886534277778,0.00034083194432034153,5 |
| scGPT,512,0.0,last,True,Energy distance,1.739100553134032,0.06701624273090624,5 |
| scGPT,512,0.0,last,True,MMD-RBF,0.15005734308690657,0.004854429860658193,5 |
| scGPT,512,0.0,last,True,Pearson delta,0.45325729060955056,0.016111493458592547,5 |
| scGPT,512,0.0,last,True,KNN purity (k=10),0.5705590323460973,0.010066352779043525,5 |
| scGPT,512,0.0,last,True,KNN purity (normalized),0.6625059211857923,0.03292989028502918,5 |
| scGPT,512,0.0,last,True,Pathway Spearman,0.9329833788444132,0.010290346779372772,5 |
| scGPT,512,0.0,last,True,Coexpression Spearman,0.8712313933680436,0.003593037491316708,5 |
| scGPT,512,0.0,last,True,Cell-cycle (same phase),0.34664985031177414,0.006154921378287757,5 |
| scGPT,512,0.0,last,True,DEG dice@100 (pred),0.08509271181553316,0.008613349746441757,5 |
| scGPT,512,0.0,last,True,Mean gene-diff Spearman,0.18724502052221526,0.01917894411047054,5 |
| scGPT,512,0.0,last,True,Cytokine Spearman,0.9019637085344921,0.00820809883287652,5 |
| scConcept,512,0.0,last,True,$R^2$,0.876162438603723,0.009972876631528986,5 |
| scConcept,512,0.0,last,True,MSE,0.010794458649914934,0.0005225384781187557,5 |
| scConcept,512,0.0,last,True,Energy distance,1.723146489354903,0.08929440605665208,5 |
| scConcept,512,0.0,last,True,MMD-RBF,0.09324407585043,0.0037914040378698283,5 |
| scConcept,512,0.0,last,True,Pearson delta,0.24811367241965057,0.018186602661718072,5 |
| scConcept,512,0.0,last,True,KNN purity (k=10),0.500826354056843,0.010091950142782458,5 |
| scConcept,512,0.0,last,True,KNN purity (normalized),0.41399413823844045,0.020366705033523193,5 |
| scConcept,512,0.0,last,True,Pathway Spearman,0.8717939567894757,0.023495199654807262,5 |
| scConcept,512,0.0,last,True,Coexpression Spearman,0.8995689185491113,0.0032290045878949954,5 |
| scConcept,512,0.0,last,True,Cell-cycle (same phase),0.34265958810127134,0.006313262373268562,5 |
| scConcept,512,0.0,last,True,DEG dice@100 (pred),0.04917752687886055,0.005292381948632604,5 |
| scConcept,512,0.0,last,True,Mean gene-diff Spearman,0.08944145379249571,0.010950160043763053,5 |
| scConcept,512,0.0,last,True,Cytokine Spearman,0.8757161100564114,0.004150840561670105,5 |
| scimilarity,128,0.0,last,True,$R^2$,0.7388861544690695,0.022915416728441378,5 |
| scimilarity,128,0.0,last,True,MSE,0.021725246430060085,0.0016315161293598837,5 |
| scimilarity,128,0.0,last,True,Energy distance,4.418626201335071,0.3245889957642923,5 |
| scimilarity,128,0.0,last,True,MMD-RBF,0.23114982145032759,0.007563570685885747,5 |
| scimilarity,128,0.0,last,True,Pearson delta,0.23876170033649968,0.016957155801863015,5 |
| scimilarity,128,0.0,last,True,KNN purity (k=10),0.5340318331798855,0.014913397388115202,5 |
| scimilarity,128,0.0,last,True,KNN purity (normalized),0.5829541621734189,0.06281729831752239,5 |
| scimilarity,128,0.0,last,True,Pathway Spearman,0.8157423744437393,0.023788127276617162,5 |
| scimilarity,128,0.0,last,True,Coexpression Spearman,0.8460121210228373,0.0026494392032515245,5 |
| scimilarity,128,0.0,last,True,Cell-cycle (same phase),0.3346237598689669,0.005877920192771646,5 |
| scimilarity,128,0.0,last,True,DEG dice@100 (pred),0.04960634831789315,0.006490640353100444,5 |
| scimilarity,128,0.0,last,True,Mean gene-diff Spearman,0.08408700624236344,0.008450882863315527,5 |
| scimilarity,128,0.0,last,True,Cytokine Spearman,0.8527106391183263,0.009619229042837985,5 |
| AE,10,0.1,last,False,$R^2$,0.544379363675963,0.0214562557886637,5 |
| AE,10,0.1,last,False,MSE,0.04461273224942895,0.0026671231579298072,5 |
| AE,10,0.1,last,False,Energy distance,13.846927422697055,0.6710045848856455,5 |
| AE,10,0.1,last,False,MMD-RBF,0.5109926456907078,0.013031653679133596,5 |
| AE,10,0.1,last,False,Pearson delta,0.101530481132538,0.01840164684635375,5 |
| AE,10,0.1,last,False,KNN purity (k=10),0.4783214791036806,0.013435772492168352,5 |
| AE,10,0.1,last,False,KNN purity (normalized),0.3251653270078675,0.0993802031263862,5 |
| AE,10,0.1,last,False,Pathway Spearman,0.5558251310728128,0.02630959936256132,5 |
| AE,10,0.1,last,False,Coexpression Spearman,0.7767898997257294,0.0031559806101487107,5 |
| AE,10,0.1,last,False,Cell-cycle (same phase),0.33064834846477087,0.008606469170553837,5 |
| AE,10,0.1,last,False,DEG dice@100 (pred),0.012975988952069112,0.0005347710912864087,5 |
| AE,10,0.1,last,False,Mean gene-diff Spearman,0.008691158509765779,0.004891961733058975,5 |
| AE,10,0.1,last,False,Cytokine Spearman,0.6708688393296149,0.020643340906743815,5 |
| AE,32,0.1,last,False,$R^2$,0.741883177578198,0.006675343992311542,5 |
| AE,32,0.1,last,False,MSE,0.02500843960872316,0.0013677832886520855,5 |
| AE,32,0.1,last,False,Energy distance,7.148313604683781,0.49128486417258277,5 |
| AE,32,0.1,last,False,MMD-RBF,0.31314635854671397,0.014379456043653059,5 |
| AE,32,0.1,last,False,Pearson delta,0.15546466301653594,0.022413419074972084,5 |
| AE,32,0.1,last,False,KNN purity (k=10),0.4793102902492035,0.01622571511569289,5 |
| AE,32,0.1,last,False,KNN purity (normalized),0.32057979345853693,0.0767943585171203,5 |
| AE,32,0.1,last,False,Pathway Spearman,0.7015272553268048,0.02114223366282,5 |
| AE,32,0.1,last,False,Coexpression Spearman,0.816116813561781,0.006594133871458208,5 |
| AE,32,0.1,last,False,Cell-cycle (same phase),0.3461333472703162,0.0008227247744947019,5 |
| AE,32,0.1,last,False,DEG dice@100 (pred),0.018452406687373874,0.0021637428885911618,5 |
| AE,32,0.1,last,False,Mean gene-diff Spearman,0.007232173374155637,0.004950532785334691,5 |
| AE,32,0.1,last,False,Cytokine Spearman,0.7688616508004428,0.004534965591445642,5 |
| AE,128,0.1,last,False,$R^2$,0.8050965892432952,0.010352883113809927,5 |
| AE,128,0.1,last,False,MSE,0.016671309576787613,0.0003414668085588967,5 |
| AE,128,0.1,last,False,Energy distance,2.4421040839010226,0.03369311905264708,5 |
| AE,128,0.1,last,False,MMD-RBF,0.16080029921887629,0.0030928576460223737,5 |
| AE,128,0.1,last,False,Pearson delta,0.2086987335868889,0.01172185012324533,5 |
| AE,128,0.1,last,False,KNN purity (k=10),0.5153184170555376,0.0032684738683511523,5 |
| AE,128,0.1,last,False,KNN purity (normalized),0.46379585822259717,0.018922369204598825,5 |
| AE,128,0.1,last,False,Pathway Spearman,0.826024710496059,0.015375316130638719,5 |
| AE,128,0.1,last,False,Coexpression Spearman,0.8412955494953233,0.004527753259408456,5 |
| AE,128,0.1,last,False,Cell-cycle (same phase),0.3481221464054711,0.005791602547106136,5 |
| AE,128,0.1,last,False,DEG dice@100 (pred),0.043046901131846706,0.0054960648761917235,5 |
| AE,128,0.1,last,False,Mean gene-diff Spearman,0.11589341538808715,0.0237764437863305,5 |
| AE,128,0.1,last,False,Cytokine Spearman,0.8603357285975246,0.003009511130842894,5 |
| AE,512,0.1,last,False,$R^2$,0.8870731117501984,0.005556732742062834,5 |
| AE,512,0.1,last,False,MSE,0.009937593090593642,0.00042051264265117734,5 |
| AE,512,0.1,last,False,Energy distance,1.8228731444081867,0.08521332858606981,5 |
| AE,512,0.1,last,False,MMD-RBF,0.12579675326763645,0.004630903109197834,5 |
| AE,512,0.1,last,False,Pearson delta,0.246368948986141,0.016513023259294806,5 |
| AE,512,0.1,last,False,KNN purity (k=10),0.4881745340932887,0.00903558806365899,5 |
| AE,512,0.1,last,False,KNN purity (normalized),0.3982241396899947,0.045418458053977095,5 |
| AE,512,0.1,last,False,Pathway Spearman,0.8605287141789588,0.020787531687492453,5 |
| AE,512,0.1,last,False,Coexpression Spearman,0.9185692511037076,0.0017619964455809266,5 |
| AE,512,0.1,last,False,Cell-cycle (same phase),0.33412249721836423,0.003422500932810657,5 |
| AE,512,0.1,last,False,DEG dice@100 (pred),0.02952998692948843,0.002868530249347301,5 |
| AE,512,0.1,last,False,Mean gene-diff Spearman,0.08263334391572641,0.017123175310767316,5 |
| AE,512,0.1,last,False,Cytokine Spearman,0.873354068148139,0.005031048633927848,5 |
| AE,2048,0.1,last,False,$R^2$,0.9186497473072907,0.005731076847835633,5 |
| AE,2048,0.1,last,False,MSE,0.007172123839128524,0.00030720722788793735,5 |
| AE,2048,0.1,last,False,Energy distance,1.847907057301759,0.038603848494461364,5 |
| AE,2048,0.1,last,False,MMD-RBF,0.12796785372142197,0.004327600377011678,5 |
| AE,2048,0.1,last,False,Pearson delta,0.38218719772922505,0.01886999155050919,5 |
| AE,2048,0.1,last,False,KNN purity (k=10),0.533569845691902,0.00560347938016595,5 |
| AE,2048,0.1,last,False,KNN purity (normalized),0.5306958345200646,0.023994129272114303,5 |
| AE,2048,0.1,last,False,Pathway Spearman,0.9108662154329616,0.015042685203283343,5 |
| AE,2048,0.1,last,False,Coexpression Spearman,0.9443663688995935,0.0008436517497226085,5 |
| AE,2048,0.1,last,False,Cell-cycle (same phase),0.3416824599943504,0.0025584806907958625,5 |
| AE,2048,0.1,last,False,DEG dice@100 (pred),0.059476196707877425,0.00767303007808695,5 |
| AE,2048,0.1,last,False,Mean gene-diff Spearman,0.14323550284023756,0.018098220616798805,5 |
| AE,2048,0.1,last,False,Cytokine Spearman,0.9036073623603247,0.006126122956490805,5 |
| nlscVI,10,0.1,last,False,$R^2$,0.5524081372964427,0.026657211440092282,5 |
| nlscVI,10,0.1,last,False,MSE,0.042170284825050273,0.0018775497096458738,5 |
| nlscVI,10,0.1,last,False,Energy distance,13.048005040463039,0.4257035614490277,5 |
| nlscVI,10,0.1,last,False,MMD-RBF,0.5766890561368019,0.01912875004342163,5 |
| nlscVI,10,0.1,last,False,Pearson delta,0.13749454100295394,0.016004992465223234,5 |
| nlscVI,10,0.1,last,False,KNN purity (k=10),0.5007041720572502,0.01792475509962595,5 |
| nlscVI,10,0.1,last,False,KNN purity (normalized),0.4693176568368794,0.10586134418318623,5 |
| nlscVI,10,0.1,last,False,Pathway Spearman,0.6147574894963267,0.031272022904669225,5 |
| nlscVI,10,0.1,last,False,Coexpression Spearman,0.7438407000799259,0.005393176978829879,5 |
| nlscVI,10,0.1,last,False,Cell-cycle (same phase),0.33988782994378114,0.006414111996799064,5 |
| nlscVI,10,0.1,last,False,DEG dice@100 (pred),0.02128845669986787,0.002349422673411877,5 |
| nlscVI,10,0.1,last,False,Mean gene-diff Spearman,0.002476215619051315,0.013838055986381142,5 |
| nlscVI,10,0.1,last,False,Cytokine Spearman,0.7405213044707827,0.015447688635331766,5 |
| nlscVI,32,0.1,last,False,$R^2$,0.8231507010838633,0.006407593061443092,5 |
| nlscVI,32,0.1,last,False,MSE,0.016332312898585246,0.0005258921118190741,5 |
| nlscVI,32,0.1,last,False,Energy distance,4.759896541993919,0.1055559392325529,5 |
| nlscVI,32,0.1,last,False,MMD-RBF,0.2244485998036562,0.006634301983027717,5 |
| nlscVI,32,0.1,last,False,Pearson delta,0.2230190362273993,0.020741354148822083,5 |
| nlscVI,32,0.1,last,False,KNN purity (k=10),0.4987277258128106,0.010555505435739082,5 |
| nlscVI,32,0.1,last,False,KNN purity (normalized),0.4383771809330012,0.06775030597941119,5 |
| nlscVI,32,0.1,last,False,Pathway Spearman,0.7646233709171101,0.026806122068253013,5 |
| nlscVI,32,0.1,last,False,Coexpression Spearman,0.812823966890633,0.00320121866423477,5 |
| nlscVI,32,0.1,last,False,Cell-cycle (same phase),0.3491677709365776,0.00877106756080993,5 |
| nlscVI,32,0.1,last,False,DEG dice@100 (pred),0.033419030023066246,0.006680534018718226,5 |
| nlscVI,32,0.1,last,False,Mean gene-diff Spearman,0.05395626528401128,0.014307255761978518,5 |
| nlscVI,32,0.1,last,False,Cytokine Spearman,0.8316465309093152,0.009357722957576928,5 |
| nlscVI,128,0.1,last,False,$R^2$,0.9217350878503991,0.004299239745710346,5 |
| nlscVI,128,0.1,last,False,MSE,0.0069456649636140426,0.00032166899156019647,5 |
| nlscVI,128,0.1,last,False,Energy distance,1.7538886524640436,0.05216837600378307,5 |
| nlscVI,128,0.1,last,False,MMD-RBF,0.11104432594347229,0.004007767406070985,5 |
| nlscVI,128,0.1,last,False,Pearson delta,0.3427079681137329,0.018981599016326685,5 |
| nlscVI,128,0.1,last,False,KNN purity (k=10),0.513585181708392,0.0071798228224244035,5 |
| nlscVI,128,0.1,last,False,KNN purity (normalized),0.4840870240408881,0.024515933488018473,5 |
| nlscVI,128,0.1,last,False,Pathway Spearman,0.9012119809053576,0.021369755978719814,5 |
| nlscVI,128,0.1,last,False,Coexpression Spearman,0.8443457367005646,0.0024015856931508327,5 |
| nlscVI,128,0.1,last,False,Cell-cycle (same phase),0.34294292983748226,0.0035677052253512663,5 |
| nlscVI,128,0.1,last,False,DEG dice@100 (pred),0.06780454774390392,0.009130293225868764,5 |
| nlscVI,128,0.1,last,False,Mean gene-diff Spearman,0.1589880115549948,0.02807180644667458,5 |
| nlscVI,128,0.1,last,False,Cytokine Spearman,0.9005368043075925,0.0038405697383259076,5 |
| nlscVI,512,0.1,last,False,$R^2$,0.8903747345434774,0.005683944491556517,5 |
| nlscVI,512,0.1,last,False,MSE,0.009413066760849234,0.00013815211050542315,5 |
| nlscVI,512,0.1,last,False,Energy distance,3.0191423351232283,0.05287417468841524,5 |
| nlscVI,512,0.1,last,False,MMD-RBF,0.14753513836916504,0.005017789805892133,5 |
| nlscVI,512,0.1,last,False,Pearson delta,0.32299944054653934,0.009787441509560965,5 |
| nlscVI,512,0.1,last,False,KNN purity (k=10),0.5043564631281632,0.005410599213220315,5 |
| nlscVI,512,0.1,last,False,KNN purity (normalized),0.47267724566212754,0.024892968011166135,5 |
| nlscVI,512,0.1,last,False,Pathway Spearman,0.8906557443651228,0.01973006377118166,5 |
| nlscVI,512,0.1,last,False,Coexpression Spearman,0.868869869150845,0.003100949259760719,5 |
| nlscVI,512,0.1,last,False,Cell-cycle (same phase),0.34383297725700757,0.006067561651198098,5 |
| nlscVI,512,0.1,last,False,DEG dice@100 (pred),0.07000270130576967,0.006531528513683134,5 |
| nlscVI,512,0.1,last,False,Mean gene-diff Spearman,0.15282741608891698,0.027014907509697945,5 |
| nlscVI,512,0.1,last,False,Cytokine Spearman,0.8830025053234705,0.004357717071281373,5 |
| nlscVI,2048,0.1,last,False,$R^2$,0.9449959791653477,0.0041295382145577,5 |
| nlscVI,2048,0.1,last,False,MSE,0.004921089521753099,0.00020103024634815294,5 |
| nlscVI,2048,0.1,last,False,Energy distance,2.9449196952752934,0.07151918984038755,5 |
| nlscVI,2048,0.1,last,False,MMD-RBF,0.18330620144934345,0.006360951520060664,5 |
| nlscVI,2048,0.1,last,False,Pearson delta,0.41284684303781843,0.010826806587843931,5 |
| nlscVI,2048,0.1,last,False,KNN purity (k=10),0.5093392889747869,0.003806686151592755,5 |
| nlscVI,2048,0.1,last,False,KNN purity (normalized),0.4491020585832907,0.03005886936155396,5 |
| nlscVI,2048,0.1,last,False,Pathway Spearman,0.9158942358758925,0.015948510373791875,5 |
| nlscVI,2048,0.1,last,False,Coexpression Spearman,0.9188446286524254,0.0017674449953646095,5 |
| nlscVI,2048,0.1,last,False,Cell-cycle (same phase),0.33782472304864963,0.003686951461191919,5 |
| nlscVI,2048,0.1,last,False,DEG dice@100 (pred),0.06413713678221863,0.006330145109863828,5 |
| nlscVI,2048,0.1,last,False,Mean gene-diff Spearman,0.1346306297520044,0.020422411766890823,5 |
| nlscVI,2048,0.1,last,False,Cytokine Spearman,0.905482689144027,0.0039769933280416935,5 |
| PCA,10,0.1,last,False,$R^2$,0.6646139775320469,0.01604846789406391,5 |
| PCA,10,0.1,last,False,MSE,0.031670789358798544,0.0010665945497475371,5 |
| PCA,10,0.1,last,False,Energy distance,15.389941458122896,0.36804943102955284,5 |
| PCA,10,0.1,last,False,MMD-RBF,0.900562561127696,0.016343890179273537,5 |
| PCA,10,0.1,last,False,Pearson delta,0.14279819223023557,0.015866895382516375,5 |
| PCA,10,0.1,last,False,KNN purity (k=10),0.5019196655093282,0.027579480657489563,5 |
| PCA,10,0.1,last,False,KNN purity (normalized),0.3926164807947555,0.1571538568558784,5 |
| PCA,10,0.1,last,False,Pathway Spearman,0.6722489366630718,0.03727248510547929,5 |
| PCA,10,0.1,last,False,Coexpression Spearman,0.5027491721874114,0.0017554658728642114,5 |
| PCA,10,0.1,last,False,Cell-cycle (same phase),0.3620825493711628,0.00664902965898772,5 |
| PCA,10,0.1,last,False,DEG dice@100 (pred),0.016715441280562536,0.0013288876004945,5 |
| PCA,10,0.1,last,False,Mean gene-diff Spearman,0.018476502057610332,0.009378527037901041,5 |
| PCA,10,0.1,last,False,Cytokine Spearman,0.74319688082275,0.007620784260619249,5 |
| PCA,32,0.1,last,False,$R^2$,0.8272235004171176,0.006663057444640724,5 |
| PCA,32,0.1,last,False,MSE,0.017512954884681343,0.0011213730775803323,5 |
| PCA,32,0.1,last,False,Energy distance,6.073411323618911,0.28723536833235525,5 |
| PCA,32,0.1,last,False,MMD-RBF,0.3397945023187244,0.013224054318157265,5 |
| PCA,32,0.1,last,False,Pearson delta,0.20027410524919373,0.018860896548074078,5 |
| PCA,32,0.1,last,False,KNN purity (k=10),0.4920656672175886,0.0045518417954426025,5 |
| PCA,32,0.1,last,False,KNN purity (normalized),0.33942390703574593,0.03179773002099696,5 |
| PCA,32,0.1,last,False,Pathway Spearman,0.7865783960185735,0.023418472129166243,5 |
| PCA,32,0.1,last,False,Coexpression Spearman,0.7802715735555072,0.002929157076179225,5 |
| PCA,32,0.1,last,False,Cell-cycle (same phase),0.3413584189850827,0.00600106450830121,5 |
| PCA,32,0.1,last,False,DEG dice@100 (pred),0.04040012377763511,0.004965402726440295,5 |
| PCA,32,0.1,last,False,Mean gene-diff Spearman,0.049631658034341504,0.010908041535555442,5 |
| PCA,32,0.1,last,False,Cytokine Spearman,0.8480665148209544,0.0070619124370009684,5 |
| PCA,128,0.1,last,False,$R^2$,0.9259029877508027,0.006735329237552836,5 |
| PCA,128,0.1,last,False,MSE,0.006865610045458569,0.0005652267739460149,5 |
| PCA,128,0.1,last,False,Energy distance,1.677427700117151,0.06537053548376642,5 |
| PCA,128,0.1,last,False,MMD-RBF,0.11616081239676568,0.00398169972299451,5 |
| PCA,128,0.1,last,False,Pearson delta,0.3453309893470357,0.015615126558384824,5 |
| PCA,128,0.1,last,False,KNN purity (k=10),0.5261518869502617,0.011216472890757402,5 |
| PCA,128,0.1,last,False,KNN purity (normalized),0.5136142776684273,0.04585777040835996,5 |
| PCA,128,0.1,last,False,Pathway Spearman,0.8847819834938623,0.016203170724210642,5 |
| PCA,128,0.1,last,False,Coexpression Spearman,0.8423321878943355,0.003317560038857599,5 |
| PCA,128,0.1,last,False,Cell-cycle (same phase),0.34697130526439707,0.006837561054492046,5 |
| PCA,128,0.1,last,False,DEG dice@100 (pred),0.061400513201174525,0.013054986551873007,5 |
| PCA,128,0.1,last,False,Mean gene-diff Spearman,0.13081674572370458,0.019605168950830875,5 |
| PCA,128,0.1,last,False,Cytokine Spearman,0.8963359821088712,0.009853221634010513,5 |
| PCA,512,0.1,last,False,$R^2$,0.9470353042698603,0.005269685994241565,5 |
| PCA,512,0.1,last,False,MSE,0.00495601789877843,0.000376095865258526,5 |
| PCA,512,0.1,last,False,Energy distance,1.279623455984215,0.04977325660120513,5 |
| PCA,512,0.1,last,False,MMD-RBF,0.09743255035811142,0.002039326322005529,5 |
| PCA,512,0.1,last,False,Pearson delta,0.4658389031997353,0.016168850868886104,5 |
| PCA,512,0.1,last,False,KNN purity (k=10),0.5469078146118406,0.008109831908192736,5 |
| PCA,512,0.1,last,False,KNN purity (normalized),0.5774896686555706,0.023654875029107746,5 |
| PCA,512,0.1,last,False,Pathway Spearman,0.9230640692908108,0.016223383449275403,5 |
| PCA,512,0.1,last,False,Coexpression Spearman,0.9068446012402266,0.0036806944983538378,5 |
| PCA,512,0.1,last,False,Cell-cycle (same phase),0.3392047407232683,0.007185376026697647,5 |
| PCA,512,0.1,last,False,DEG dice@100 (pred),0.07752354894424664,0.008281103186953504,5 |
| PCA,512,0.1,last,False,Mean gene-diff Spearman,0.1620037279179984,0.020729967118932418,5 |
| PCA,512,0.1,last,False,Cytokine Spearman,0.9061461752854967,0.003274969849297491,5 |
| PCA,2048,0.1,last,False,$R^2$,0.958701412115022,0.0042995445618855405,5 |
| PCA,2048,0.1,last,False,MSE,0.0038087420796525705,0.00031249607235912146,5 |
| PCA,2048,0.1,last,False,Energy distance,1.0089047910925895,0.035802315849404104,5 |
| PCA,2048,0.1,last,False,MMD-RBF,0.08886557685661264,0.0026039969816335578,5 |
| PCA,2048,0.1,last,False,Pearson delta,0.5469958097604918,0.01694539252330482,5 |
| PCA,2048,0.1,last,False,KNN purity (k=10),0.5550634339842244,0.008349857358411934,5 |
| PCA,2048,0.1,last,False,KNN purity (normalized),0.6056463873824119,0.008225873289338713,5 |
| PCA,2048,0.1,last,False,Pathway Spearman,0.9443307125614192,0.00854413341074179,5 |
| PCA,2048,0.1,last,False,Coexpression Spearman,0.94561474725501,0.0011682249828595223,5 |
| PCA,2048,0.1,last,False,Cell-cycle (same phase),0.3370520886277869,0.005546615339748315,5 |
| PCA,2048,0.1,last,False,DEG dice@100 (pred),0.07961456033589423,0.008195514720632064,5 |
| PCA,2048,0.1,last,False,Mean gene-diff Spearman,0.19161656763575022,0.02192560224099494,5 |
| PCA,2048,0.1,last,False,Cytokine Spearman,0.9187420195558659,0.0037835063194660797,5 |
| SE,2058,0.1,last,True,$R^2$,0.9298666060297464,0.004839380309430657,5 |
| SE,2058,0.1,last,True,MSE,0.0060823674335579465,0.0002611453261604913,5 |
| SE,2058,0.1,last,True,Energy distance,0.8898774364167764,0.0537816865482438,5 |
| SE,2058,0.1,last,True,MMD-RBF,0.04878278057122877,0.0026460378767020854,5 |
| SE,2058,0.1,last,True,Pearson delta,0.436926355945507,0.014324330181897795,5 |
| SE,2058,0.1,last,True,KNN purity (k=10),0.5747329005692512,0.009147598796288502,5 |
| SE,2058,0.1,last,True,KNN purity (normalized),0.6978962201838398,0.03019263384503256,5 |
| SE,2058,0.1,last,True,Pathway Spearman,0.9430115168045601,0.009445717825004047,5 |
| SE,2058,0.1,last,True,Coexpression Spearman,0.9336352329282516,0.0015188758353840985,5 |
| SE,2058,0.1,last,True,Cell-cycle (same phase),0.336973352132175,0.0029691871094418335,5 |
| SE,2058,0.1,last,True,DEG dice@100 (pred),0.0927303386335839,0.004376729478842824,5 |
| SE,2058,0.1,last,True,Mean gene-diff Spearman,0.23269871888688698,0.023213811681690316,5 |
| SE,2058,0.1,last,True,Cytokine Spearman,0.9151436481531352,0.006600693967523888,5 |
| scGPT,512,0.1,last,True,$R^2$,0.8672187034640928,0.006480851806050688,5 |
| scGPT,512,0.1,last,True,MSE,0.011280153672589015,0.0001251176236365857,5 |
| scGPT,512,0.1,last,True,Energy distance,2.4091771011993215,0.07336394296138544,5 |
| scGPT,512,0.1,last,True,MMD-RBF,0.15740799221493945,0.004772768410414292,5 |
| scGPT,512,0.1,last,True,Pearson delta,0.3500810891400289,0.01771646799206698,5 |
| scGPT,512,0.1,last,True,KNN purity (k=10),0.5831506710350658,0.008434704369190806,5 |
| scGPT,512,0.1,last,True,KNN purity (normalized),0.7474912395655623,0.04444648970711053,5 |
| scGPT,512,0.1,last,True,Pathway Spearman,0.8969058383825231,0.016788396032761867,5 |
| scGPT,512,0.1,last,True,Coexpression Spearman,0.8371446901735276,0.004363773978845733,5 |
| scGPT,512,0.1,last,True,Cell-cycle (same phase),0.3330237642048817,0.007175596814977226,5 |
| scGPT,512,0.1,last,True,DEG dice@100 (pred),0.0883400541140016,0.00782380446783208,5 |
| scGPT,512,0.1,last,True,Mean gene-diff Spearman,0.2037267392511747,0.022867560726178987,5 |
| scGPT,512,0.1,last,True,Cytokine Spearman,0.8824112652164098,0.003927248327728469,5 |
| scConcept,512,0.1,last,True,$R^2$,0.8534918344177038,0.010759171087389621,5 |
| scConcept,512,0.1,last,True,MSE,0.01276550430587357,0.0004979180097483523,5 |
| scConcept,512,0.1,last,True,Energy distance,2.3387011485708458,0.10254403606781952,5 |
| scConcept,512,0.1,last,True,MMD-RBF,0.12081159678957479,0.004982091225155155,5 |
| scConcept,512,0.1,last,True,Pearson delta,0.288022680414905,0.015106328382805618,5 |
| scConcept,512,0.1,last,True,KNN purity (k=10),0.5443804380160534,0.008490949394049242,5 |
| scConcept,512,0.1,last,True,KNN purity (normalized),0.5608128185102901,0.0375473777292218,5 |
| scConcept,512,0.1,last,True,Pathway Spearman,0.8831388421741438,0.021788945772771705,5 |
| scConcept,512,0.1,last,True,Coexpression Spearman,0.8781965562062035,0.0025586346627378648,5 |
| scConcept,512,0.1,last,True,Cell-cycle (same phase),0.3415287638101054,0.006809011140815255,5 |
| scConcept,512,0.1,last,True,DEG dice@100 (pred),0.06912932499782619,0.007255845025959771,5 |
| scConcept,512,0.1,last,True,Mean gene-diff Spearman,0.0962278083080931,0.007872856379263816,5 |
| scConcept,512,0.1,last,True,Cytokine Spearman,0.8732160738677421,0.006132821449446107,5 |
| scimilarity,128,0.1,last,True,$R^2$,0.7472328123840098,0.010773574715877247,5 |
| scimilarity,128,0.1,last,True,MSE,0.022695313256602696,0.0005469980835924199,5 |
| scimilarity,128,0.1,last,True,Energy distance,5.4419596992722585,0.32134142373819596,5 |
| scimilarity,128,0.1,last,True,MMD-RBF,0.30568870197063924,0.023647880329110908,5 |
| scimilarity,128,0.1,last,True,Pearson delta,0.22656168012816336,0.010007776220686639,5 |
| scimilarity,128,0.1,last,True,KNN purity (k=10),0.5412615366410191,0.008074774898556115,5 |
| scimilarity,128,0.1,last,True,KNN purity (normalized),0.5283622470358491,0.0576739907034666,5 |
| scimilarity,128,0.1,last,True,Pathway Spearman,0.8397838644756874,0.010635376646767338,5 |
| scimilarity,128,0.1,last,True,Coexpression Spearman,0.8236289552352865,0.005090408277098791,5 |
| scimilarity,128,0.1,last,True,Cell-cycle (same phase),0.3375555810180466,0.003815353671178296,5 |
| scimilarity,128,0.1,last,True,DEG dice@100 (pred),0.06226616722071952,0.008061424262174674,5 |
| scimilarity,128,0.1,last,True,Mean gene-diff Spearman,0.09317269059004019,0.015265269355703675,5 |
| scimilarity,128,0.1,last,True,Cytokine Spearman,0.8590674449964044,0.007057140154787966,5 |
|
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