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Browse files
processed/pdb-2026-08-08/SOURCE.json
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{
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"schema_version": 1,
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"snapshot_id": "pdb-2026-08-08",
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"source_type": "pdb",
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"created_at_utc": "2026-08-08T01:29:28.000948Z",
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"git_sha": "fa40683ea2eea4db890679b9d49d1938cf817132",
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"n_structures": 236326,
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"raw_data_sources": {
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"mmcif": "rsync://rsync.rcsb.org::ftp_data/structures/divided/mmCIF/",
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"ccd": "https://files.wwpdb.org/pub/pdb/data/monomers/components.cif",
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"rcsb_msa": "https://boltz1.s3.us-east-2.amazonaws.com/rcsb_raw_msa.tar",
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"openfold_msa": "https://boltz1.s3.us-east-2.amazonaws.com/openfold_raw_msa.tar"
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},
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"preprocess": {
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"command": "helico-preprocess all <raw> <processed>",
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"max_resolution": 9.0,
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"token_bonds_format": "sparse",
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"contacts": "pyconfind-v1"
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},
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"fingerprints": {
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"ccd_cache.pkl": "d65374124e210a4640de4ab601f9d3567db48fbbb664746249a916f34a33eb5a",
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"manifest.json": "5fae5abe7edfe6dd073eca48ae76f1f0e6d30934df91c289868805cec1236b9a"
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}
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}
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processed/pdb-2026-08-08/manifest.json.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:f5fd22cad9f7a9c0b75d55fc74f0c40f95351a5892f5aa90b5d282cc6984c7c1
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size 90648502
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processed/pdb-2026-08-08/openfold_raw_msa_index.pkl
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version https://git-lfs.github.com/spec/v1
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oid sha256:3f2af658b34edf208a199f80ae38cb5e318a2dbe96426ec9adc2938fa5ede7f5
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size 11210018
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processed/pdb-2026-08-08/rcsb_raw_msa_index.pkl
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version https://git-lfs.github.com/spec/v1
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oid sha256:89bbe7b0b0798c815be76601f8a9f0ab2a8e15824d217ad93278b19e9424c89d
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size 15218640
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