index int64 | repo_name string | branch_name string | path string | content string | import_graph string |
|---|---|---|---|---|---|
82,470 | kennydude/Search-Engine | refs/heads/master | /goodies.py | def intToBinary(query):
try:
result = int2bin(int(query))
except ValueError:
result = ''
for c in query:
result += bin(ord(c))[2:]
return {
"style" : "goodies",
"title" : "Base-10 (Deanary) to Base-2 (Binary)",
"snippet" : "%s is %s" % (query, result)
}
def int2bin(n, digits=8):
rep = bin(n)[2:]... | {"/sources/videos.py": ["/engine.py", "/magic.py"], "/sources/images.py": ["/engine.py", "/magic.py"], "/widget.py": ["/engine.py"], "/sources/__init__.py": ["/sources/web.py", "/sources/images.py", "/sources/music.py", "/sources/videos.py"], "/sources/music.py": ["/engine.py", "/magic.py"], "/magic.py": ["/engine.py"]... |
82,473 | SerGeRybakov/OWM | refs/heads/master | /views/registration.py | """View for users register."""
from fastapi import APIRouter, HTTPException
from database.engine import session
from database.models import User
from validators.validation import ValidationError, validate
from database.schemas import UserData
router = APIRouter(tags=["registration"])
@router.post("/registration", s... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,474 | SerGeRybakov/OWM | refs/heads/master | /views/users_list.py | """View for list of users."""
from fastapi import APIRouter, Depends
from database.engine import session
from database.models import User
from sqlalchemy import select
from validators.authentication import get_current_user
router = APIRouter(tags=["users"])
@router.get("/users")
async def users_list(current_user: ... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,475 | SerGeRybakov/OWM | refs/heads/master | /database/schemas.py | """Models for mapping request data."""
from pydantic.main import BaseModel
__all__ = ["UserData", "ItemData", "TransferData"]
class UserData(BaseModel):
"""Map login and register data from request."""
username: str
password: str
class ItemData(BaseModel):
"""Map item data from request."""
tit... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,476 | SerGeRybakov/OWM | refs/heads/master | /main.py | """Main module."""
import uvicorn
from fastapi import APIRouter, FastAPI
from views import *
app = FastAPI()
root_router = APIRouter(prefix="/api/v1")
root_router.include_router(reg_router)
root_router.include_router(login_router)
root_router.include_router(items_router)
root_router.include_router(users_list_route... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,477 | SerGeRybakov/OWM | refs/heads/master | /config.py | """Global configuration settings."""
import os
from functools import lru_cache
from dotenv import load_dotenv
from fastapi import Depends
from pydantic import BaseSettings
load_dotenv()
class Settings(BaseSettings):
"""Base app settings."""
SECRET_KEY: str = os.getenv("SECRET_KEY", "TEST_KEY")
@lru_cache... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,478 | SerGeRybakov/OWM | refs/heads/master | /tests/test_api/test_registration.py | """Test registration view."""
import json
from unittest.mock import patch
import pytest
from config import get_settings
settings = get_settings()
def test_normal_registration(test_client, test_session):
"""Test successful login."""
with patch("views.registration.session", test_session):
with patch(... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,479 | SerGeRybakov/OWM | refs/heads/master | /database/engine.py | """Database engine module."""
import os
from sqlalchemy.ext.asyncio import AsyncSession, create_async_engine
basedir = os.path.abspath(os.path.dirname(__file__))
filename = os.path.join(basedir, "prod.db")
engine = create_async_engine("sqlite:///" + filename, echo=False)
session = AsyncSession(engine)
| {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,480 | SerGeRybakov/OWM | refs/heads/master | /views/login.py | """View for users login."""
import datetime
import jwt
import jwt.exceptions
from fastapi import APIRouter, Depends
from sqlalchemy import select
from config import Settings, get_settings
from database.engine import session
from database.models import User, UserToken
from validators.authentication import authenticate... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,481 | SerGeRybakov/OWM | refs/heads/master | /database/models.py | """Database tables."""
import asyncio
import json
import os
from passlib.context import CryptContext
from sqlalchemy import Column, ForeignKey, Integer, String
from sqlalchemy.ext.declarative import declarative_base
from sqlalchemy.future import select
from database.engine import engine, session
Base = declarative_... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,482 | SerGeRybakov/OWM | refs/heads/master | /validators/validation.py | """Username and password validators."""
import re
from sqlalchemy import select
from database.engine import session
from database.models import User
__all__ = ["ValidationError", "validate"]
class ValidationError(Exception):
"""Validation error."""
pass
async def __validate(credentials):
"""Starts ... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,483 | SerGeRybakov/OWM | refs/heads/master | /validators/authentication.py | """Users' authentication."""
import jwt
from fastapi import Depends, HTTPException
from fastapi.security import OAuth2PasswordBearer, OAuth2PasswordRequestForm
from jwt import PyJWTError
from sqlalchemy import select
from starlette import status
from config import Settings, get_settings
from database.engine import ses... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,484 | SerGeRybakov/OWM | refs/heads/master | /tests/test_api/test_models.py | """Test models module."""
from unittest.mock import patch
import pytest
from sqlalchemy import select
from sqlalchemy.ext.asyncio import AsyncSession
from database.models import Item, User, main
@pytest.mark.asyncio
@pytest.mark.parametrize(("title", "user_id"), [("item1-1", 1), ("item1-2", 1), ("item2-1", 2), ("i... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,485 | SerGeRybakov/OWM | refs/heads/master | /tests/test_api/test_login.py | """Test login view."""
import time
from random import randint
from unittest.mock import patch
import pytest
from config import get_settings
settings = get_settings()
def test_normal_logging_in(test_client, test_session):
"""Test successful login."""
with patch("validators.authentication.session", test_sess... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,486 | SerGeRybakov/OWM | refs/heads/master | /tests/test_api/test_users_list_view.py | """Test users_list view."""
from unittest.mock import patch
from config import get_settings
import pytest
settings = get_settings()
def test_get_users_list(test_client, test_session, token):
"""Test users list view sends 200 & users."""
with patch("validators.authentication.session", test_session):
... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,487 | SerGeRybakov/OWM | refs/heads/master | /tests/conftest.py | """Pytest common fixtures."""
import asyncio
import json
import os
from unittest.mock import patch
import pytest
from fastapi.testclient import TestClient
from sqlalchemy.ext.asyncio import AsyncSession, create_async_engine
from database.models import main
from main import app
basedir = os.path.abspath(os.path.dirna... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,488 | SerGeRybakov/OWM | refs/heads/master | /views/__init__.py | __all__ = ["login_router", "users_list_router", "reg_router", "items_router", "exchange_router"]
from .items import items_router, exchange_router
from .login import router as login_router
from .registration import router as reg_router
from .users_list import router as users_list_router
| {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,489 | SerGeRybakov/OWM | refs/heads/master | /tests/test_api/test_items.py | """Test items view."""
import json
from unittest.mock import patch
import pytest
from config import get_settings
from views.login import create_access_token
settings = get_settings()
@pytest.fixture()
def exchange_link2(test_client, test_session, token):
"""Create an exchange link to move item 1-1 from testuse... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,490 | SerGeRybakov/OWM | refs/heads/master | /views/items.py | """Views for items handling."""
import jwt
from fastapi import APIRouter, Depends, HTTPException
from jwt import PyJWTError
from sqlalchemy import select
from config import Settings, get_settings
from database.schemas import ItemData, TransferData
from database.engine import session
from database.models import Item, U... | {"/views/registration.py": ["/database/engine.py", "/database/models.py", "/validators/validation.py", "/database/schemas.py"], "/views/users_list.py": ["/database/engine.py", "/database/models.py", "/validators/authentication.py"], "/main.py": ["/views/__init__.py"], "/tests/test_api/test_registration.py": ["/config.p... |
82,493 | AsafKov/mtm_ex3 | refs/heads/master | /test.py | from gradesCalc import *
# Testing your implemented functions, feel free to add more tests below
def main():
# Testing the `final_grade` function
input_path = 'tests/input'
output_path = 'tests/out'
course_avg = final_grade(input_path=input_path, output_path=output_path)
assert course_avg == 70
... | {"/test.py": ["/gradesCalc.py"]} |
82,494 | AsafKov/mtm_ex3 | refs/heads/master | /gradesCalc.py | #### PART 1 ####
# final_grade: Calculates the final grade for each student, and writes the output (while eliminating illegal
# rows from the input file) into the file in `output_path`. Returns the average of the grades.
# input_path: Path to the file that contains the input
# output_path: Path to the file that wil... | {"/test.py": ["/gradesCalc.py"]} |
82,495 | JonnySueck/TwitterClone | refs/heads/main | /notification/views.py | from django.shortcuts import redirect, render
from django.db.models.signals import post_save
from tweet.models import Tweet
from twitteruser.models import TwitterUser
from notification.models import notification
import datetime
import time
# Create your views here.
def notifications(request):
user = request.user
... | {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,496 | JonnySueck/TwitterClone | refs/heads/main | /notification/migrations/0002_auto_20210308_1618.py | # Generated by Django 3.1.7 on 2021-03-08 16:18
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('notification', '0001_initial'),
]
operations = [
migrations.AlterField(
model_name='notification',
name='notificatio... | {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,497 | JonnySueck/TwitterClone | refs/heads/main | /twitteruser/admin.py | from django.contrib import admin
from twitteruser.models import TwitterUser
class AdminState(admin.ModelAdmin):
list_display = ('username',)
# Register your models here.
admin.site.register(TwitterUser, AdminState) | {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,498 | JonnySueck/TwitterClone | refs/heads/main | /tweet/models.py | from django.db import models
from twitteruser.views import TwitterUser
from django.utils import timezone
# Create your models here.
class Tweet(models.Model):
text = models.CharField(max_length=140)
date_posted = models.DateTimeField(default=timezone.now)
user = models.ForeignKey(TwitterUser, on_delete=m... | {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,499 | JonnySueck/TwitterClone | refs/heads/main | /twitterclone/urls.py | """twitterclone URL Configuration
The `urlpatterns` list routes URLs to views. For more information please see:
https://docs.djangoproject.com/en/3.1/topics/http/urls/
Examples:
Function views
1. Add an import: from my_app import views
2. Add a URL to urlpatterns: path('', views.home, name='home')
Class-... | {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,500 | JonnySueck/TwitterClone | refs/heads/main | /authentication/forms.py | from django import forms
from twitteruser.models import TwitterUser
from django.forms.widgets import PasswordInput
class SignupForm(forms.ModelForm):
password = forms.CharField(widget=PasswordInput)
class Meta:
model = TwitterUser
fields = ('username', 'password') | {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,501 | JonnySueck/TwitterClone | refs/heads/main | /authentication/views.py | from django.shortcuts import render
from .forms import SignupForm
from twitteruser.views import TwitterUser
# Create your views here.
def signup_view(request):
if request.method == 'POST':
form = SignupForm(request.POST)
if form.is_valid():
data = form.cleaned_data
new_user... | {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,502 | JonnySueck/TwitterClone | refs/heads/main | /twitteruser/models.py | from django.db import models
from django.contrib.auth.models import AbstractUser
from django.conf import settings
# Create your models here.
class TwitterUser(AbstractUser):
following = models.ManyToManyField(settings.AUTH_USER_MODEL, blank=True)
| {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,503 | JonnySueck/TwitterClone | refs/heads/main | /tweet/views.py | from tweet.models import Tweet
from django.shortcuts import render, HttpResponseRedirect
from .forms import TweetForm
from django.contrib.auth.decorators import login_required
from twitteruser.views import user_detail, following
from notification.models import notification
from notification.views import notifications
... | {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,504 | JonnySueck/TwitterClone | refs/heads/main | /notification/models.py | from django.db import models
# Create your models here.
class notification(models.Model):
notifications = models.IntegerField(default=0, null=True)
| {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,505 | JonnySueck/TwitterClone | refs/heads/main | /twitteruser/views.py | from django.shortcuts import redirect, render
from django.contrib.auth.decorators import login_required
from .models import TwitterUser
from django.template import RequestContext
# Create your views here.
@login_required
def homepage(request):
return render(request, 'index.html', {})
def user_detail(request, u... | {"/notification/views.py": ["/tweet/models.py", "/twitteruser/models.py", "/notification/models.py"], "/twitteruser/admin.py": ["/twitteruser/models.py"], "/tweet/models.py": ["/twitteruser/views.py"], "/twitterclone/urls.py": ["/authentication/views.py", "/tweet/views.py", "/notification/views.py"], "/authentication/f... |
82,539 | and-jonas/LesionZoo | refs/heads/main | /utils_tr.py | import random
import numpy as np
from scipy.spatial.distance import cdist
import math
import cv2
from itertools import groupby
from operator import itemgetter
import scipy.interpolate as si
from skimage.draw import line
def most_frequent(input_list):
"""
Find the most frequent element of a list
:param inp... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,540 | and-jonas/LesionZoo | refs/heads/main | /feature_extraction_functions_tr.py |
import cv2
import numpy as np
import pandas as pd
import copy
from itertools import chain, repeat
from matplotlib import pyplot as plt
import utils_tr as utils_r
import utils as utils
from scipy import ndimage as ndi
from scipy import signal
def get_color_spaces(patch):
"""
Make color transformations
:pa... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,541 | and-jonas/LesionZoo | refs/heads/main | /image_segmentor_mult.py |
# ======================================================================================================================
# Author: Jonas Anderegg, jonas.anderegg@usys.ethz.ch
# Project: LesionZoo
# Date: 15.03.2021
# ======================================================================================================... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,542 | and-jonas/LesionZoo | refs/heads/main | /image_segmentor_tr.py |
# ======================================================================================================================
# Author: Jonas Anderegg, jonas.anderegg@usys.ethz.ch
# Project: LesionZoo
# Date: 15.03.2021
# Tool for sampling training data for lesion classification
# ==========================================... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,543 | and-jonas/LesionZoo | refs/heads/main | /Leftover_code_tr.py |
# from fef_tr
# Get contour coordinates
def get_cont_coordinates(contour, img):
blank = np.zeros(img.shape[:2], dtype=np.uint8)
cv2.drawContours(blank, contour, -1, 125, 1)
# extract coordinates
coords_cont = np.where(blank == 125)
return coords_cont
def resize_contour(img, mask_pp, distance_i... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,544 | and-jonas/LesionZoo | refs/heads/main | /multtest.py | import multiprocessing
from multiprocessing import Manager, Process
from pathlib import Path
import pickle
import numpy as np
import feature_extraction_functions as fef
import imageio
# load model
dir_model = "Z:/Public/Jonas/001_LesionZoo/Output/Models/rf_segmentation_v2.pkl"
with open(dir_model, 'rb') as model:
... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,545 | and-jonas/LesionZoo | refs/heads/main | /roi_selector.py |
# ======================================================================================================================
# Author: Jonas Anderegg, jonas.anderegg@usys.ethz.ch
# Project: LesionZoo
# Date: 15.03.2021
# Tool for sampling training data for lesion classification
# ==========================================... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,546 | and-jonas/LesionZoo | refs/heads/main | /select_images.py |
# ======================================================================================================================
# Author: Jonas Anderegg, jonas.anderegg@usys.ethz.ch
# Project: LesionZoo
# Date: 15.03.2021
# Sample training data for lesion classification
# =====================================================... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,547 | and-jonas/LesionZoo | refs/heads/main | /image_segmentor2.py |
# ======================================================================================================================
# Author: Jonas Anderegg, jonas.anderegg@usys.ethz.ch
# Project: LesionZoo
# Date: 15.03.2021
# ======================================================================================================... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,548 | and-jonas/LesionZoo | refs/heads/main | /image_selector.py | # ======================================================================================================================
# Author: Jonas Anderegg, jonas.anderegg@usys.ethz.ch
# Project: LesionZoo
# Date: 15.03.2021
# Tool for sampling training data for lesion classification
# ===========================================... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,549 | and-jonas/LesionZoo | refs/heads/main | /run.py |
# ======================================================================================================================
# Author: Jonas Anderegg, jonas.anderegg@usys.ethz.ch
# Project: LesionZoo
# Date: 15.03.2021
# Sample training data for lesion classification
# =====================================================... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,550 | and-jonas/LesionZoo | refs/heads/main | /run_segmentation.py |
# ======================================================================================================================
# Author: Jonas Anderegg, jonas.anderegg@usys.ethz.ch
# Project: LesionZoo
# Date: 23.06.2021
# ======================================================================================================... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,551 | and-jonas/LesionZoo | refs/heads/main | /SegmentationFunctions.py |
# ======================================================================================================================
# Author: Jonas Anderegg, jonas.anderegg@usys.ethz.ch
# Project: LesionZoo
# Date: 15.03.2021
# Functions for training data extraction: Pixel-wise segmentation of scanned leaf images into necrotic l... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,552 | and-jonas/LesionZoo | refs/heads/main | /Leftover_code.py | # from fef
def extract_contour_pixel_values(img, contours):
# find maximum length of contours
# all contours will be scaled to this length
length = []
for contour in contours:
l = len(contour[0])
length.append(l)
max_length_contour = max(length)
# iterate over dilation levels
... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,553 | and-jonas/LesionZoo | refs/heads/main | /feature_extraction_functions.py |
import cv2
import numpy as np
import pandas as pd
import copy
from itertools import chain, repeat
from matplotlib import pyplot as plt
from sklearn.cluster import KMeans
import utils
from scipy.spatial.distance import cdist
from scipy.spatial import distance
from scipy import ndimage as ndi
from scipy import signal
fr... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,554 | and-jonas/LesionZoo | refs/heads/main | /utils.py | import random
import numpy as np
from scipy.spatial.distance import cdist
import math
import cv2
import scipy.interpolate as si
from skimage.draw import line
def most_frequent(input_list):
"""
Find the most frequent element of a list
:param input_list: A list to search
:return: The most frequent eleme... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,555 | and-jonas/LesionZoo | refs/heads/main | /train_segmentation.py |
# ======================================================================================================================
# Author: Jonas Anderegg, jonas.anderegg@usys.ethz.ch
# Project: LesionZoo
# Date: 15.03.2021
# Extract training data from labelled images and train segmentation algorithm
# ========================... | {"/feature_extraction_functions_tr.py": ["/utils_tr.py", "/utils.py"], "/image_segmentor_mult.py": ["/feature_extraction_functions.py", "/utils.py"], "/image_segmentor_tr.py": ["/feature_extraction_functions_tr.py", "/utils_tr.py"], "/multtest.py": ["/feature_extraction_functions.py"], "/select_images.py": ["/image_sel... |
82,556 | MerhanElSaid/Theia | refs/heads/master | /utils.py | import torch
from torch.autograd import Variable
from torch.utils.data import Dataset
import numpy as np
import matplotlib
matplotlib.use('Agg')
import matplotlib.pyplot as plt
import shutil
class MyDataset(Dataset):
def __init__(self, subset, transform=None):
self.subset = subset
self.transform ... | {"/scripts/train_gender.py": ["/utils.py"], "/api.py": ["/models/age.py"]} |
82,557 | MerhanElSaid/Theia | refs/heads/master | /models/age.py | import torch.hub
import torch.nn as nn
def loadAgeModel():
model = torch.hub.load('pytorch/vision:v0.6.0', 'resnet50', pretrained=False)
for name, param in model.named_parameters():
param.requires_grad = True
num_classes = 94
model.fc = nn.Sequential(nn.Linear(model.fc.in_features, 512), nn.... | {"/scripts/train_gender.py": ["/utils.py"], "/api.py": ["/models/age.py"]} |
82,558 | MerhanElSaid/Theia | refs/heads/master | /scripts/train_gender.py | import sys
from pathlib import Path
project_dir = (Path(__file__).parent / '..').resolve()
if str(project_dir) not in sys.path: sys.path.insert(0, str(project_dir))
import torch
import torch.nn as nn
import torchvision.datasets as dataset
import torchvision.transforms as transforms
from torch.autograd import Variable... | {"/scripts/train_gender.py": ["/utils.py"], "/api.py": ["/models/age.py"]} |
82,559 | MerhanElSaid/Theia | refs/heads/master | /api.py | import io
import json
import torch
import torchvision.transforms as transforms
import torch.backends.cudnn as cudnn
import numpy as np
from PIL import Image
import os
import urllib.request
from flask import Flask, jsonify, request
import random
import cv2
from models.gender import Model_gend
from models.age import load... | {"/scripts/train_gender.py": ["/utils.py"], "/api.py": ["/models/age.py"]} |
82,560 | MerhanElSaid/Theia | refs/heads/master | /scripts/Facial_exp_train.py | import sys
from pathlib import Path
project_dir = (Path(__file__).parent / '..').resolve()
if str(project_dir) not in sys.path: sys.path.insert(0, str(project_dir))
import torch
import torch.nn as nn
from models.Facial_Exp import *
from dataset.Face_Exp.dataset import *
def Train(model, n_epochs, optimizer, criterio... | {"/scripts/train_gender.py": ["/utils.py"], "/api.py": ["/models/age.py"]} |
82,561 | dfm/rmhmc | refs/heads/main | /tests/hamiltonian_test.py | from typing import Tuple
import jax.numpy as jnp
import numpy as np
import pytest
from jax import lax, random
from rmhmc.base_types import Array, Momentum
from rmhmc.hamiltonian import euclidean, riemannian
from .problems import banana_logprob_and_metric
L = np.random.default_rng(9).normal(size=(5, 5))
L[np.diag_in... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,562 | dfm/rmhmc | refs/heads/main | /src/rmhmc/integrator.py | __all__ = ["leapfrog", "implicit_midpoint"]
from typing import Any, Callable, NamedTuple, Optional, Tuple, Union
import jax
import jax.numpy as jnp
from jax.flatten_util import ravel_pytree
from jax.tree_util import tree_map
from .base_types import (
Array,
KineticFunction,
KineticState,
Momentum,
... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,563 | dfm/rmhmc | refs/heads/main | /src/rmhmc/sampling.py | __all__ = ["run", "sample"]
import warnings
from functools import partial
from typing import List, Tuple
import jax.numpy as jnp
import numpy as np
from jax import lax, local_device_count, pmap, random, vmap
from jax._src.api import vmap
from jax.tree_util import tree_flatten
from rmhmc.base_types import Position, i... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,564 | dfm/rmhmc | refs/heads/main | /src/rmhmc/step_size.py | __all__ = ["dual_averaging"]
from typing import Callable, NamedTuple, Tuple
import jax.numpy as jnp
from .base_types import DualAveragingState, Scalar
def dual_averaging(
t0: float = 10, kappa: float = 0.75, gamma: float = 0.05
) -> Tuple[
Callable[[Scalar], DualAveragingState],
Callable[[Scalar, DualA... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,565 | dfm/rmhmc | refs/heads/main | /src/rmhmc/hmc.py | __all__ = ["hmc"]
from typing import Callable, Dict, Optional, Union
import jax
import jax.numpy as jnp
from jax import random
from jax.flatten_util import ravel_pytree
from rmhmc.base_types import (
HMCState,
MCMCKernel,
Position,
ProposalStats,
SamplerCarry,
SamplerTuningState,
Scalar,
... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,566 | dfm/rmhmc | refs/heads/main | /src/rmhmc/base_types.py | from typing import Any, Callable, NamedTuple, Optional
from jax import random
def identity(x: Any) -> Any:
return x
Array = Any
Position = Any
Momentum = Any
Scalar = Any
class DualAveragingState(NamedTuple):
count: Scalar
x: Scalar
x_avg: Scalar
g_avg: Scalar
mu: Scalar
class Euclidean... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,567 | dfm/rmhmc | refs/heads/main | /src/rmhmc/hamiltonian.py | __all__ = [
"euclidean",
"riemannian",
"compute_total_energy",
"integrate",
"integrate_trajectory",
]
from typing import Any, Callable, NamedTuple, Optional, Tuple
import jax.numpy as jnp
import jax.scipy as jsp
from jax import lax, random
from jax.flatten_util import ravel_pytree
from .base_type... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,568 | dfm/rmhmc | refs/heads/main | /tests/hmc_test.py | import jax.numpy as jnp
import numpy as np
from jax import random
from rmhmc.hmc import hmc
from .problems import banana
def test_divergence() -> None:
system = hmc(banana(False, False), initial_step_size=1000.0)
state = system.init(jnp.array([0.3, 0.5]))
state_ = system.step(state, random.PRNGKey(5))
... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,569 | dfm/rmhmc | refs/heads/main | /tests/problems.py | import dataclasses
from functools import partial
from typing import Callable, Tuple
import jax.numpy as jnp
import numpy as np
from jax.flatten_util import ravel_pytree
from rmhmc.base_types import (
Array,
Momentum,
Position,
PotentialFunction,
Scalar,
)
from rmhmc.hamiltonian import System, eucl... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,570 | dfm/rmhmc | refs/heads/main | /docs/conf.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
from pkg_resources import DistributionNotFound, get_distribution
try:
__version__ = get_distribution("rmhmc").version
except DistributionNotFound:
__version__ = "dev"
extensions = [
"sphinx.ext.autodoc",
"sphinx.ext.intersphinx",
"sphinx.ext.napoleon... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,571 | dfm/rmhmc | refs/heads/main | /tests/step_size_test.py | from typing import Callable
import jax
import jax.numpy as jnp
import numpy as np
from rmhmc.base_types import Array
from rmhmc.step_size import dual_averaging
def test_dual_averaging() -> None:
def optimize(f: Callable[[Array], Array]) -> Array:
init, update = dual_averaging(gamma=0.5)
state = ... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,572 | dfm/rmhmc | refs/heads/main | /src/rmhmc/__init__.py | # -*- coding: utf-8 -*-
__all__ = ["hamiltonian", "hmc", "integrator", "sampling"]
from . import hamiltonian, hmc, integrator, sampling
from .rmhmc_version import __version__ # noqa
__uri__ = "https://github.com/dfm/rmhmc"
__author__ = "Dan Foreman-Mackey"
__email__ = "foreman.mackey@gmail.com"
__description__ = "R... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,573 | dfm/rmhmc | refs/heads/main | /tests/integrator_test.py | from functools import partial
from os import stat
from typing import Tuple
import jax
import jax.numpy as jnp
import numpy as np
import pytest
from jax.flatten_util import ravel_pytree
from jax.tree_util import tree_map
from rmhmc.base_types import Array, Momentum, Position, Scalar
from rmhmc.hamiltonian import (
... | {"/tests/hamiltonian_test.py": ["/tests/problems.py"], "/src/rmhmc/integrator.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/step_size.py": ["/src/rmhmc/base_types.py"], "/src/rmhmc/hamiltonian.py": ["/src/rmhmc/base_types.py", "/src/rmhmc/integrator.py"], "/tests/hmc_test.py": ["/tests/problems.py"], "/tests/integrato... |
82,574 | dschien/ep_deploy | refs/heads/master | /configure_aws.py | import ConfigParser
import boto3
from fabric import colors
from fabric.api import *
from fabric.contrib.files import upload_template
CONFIG_FILE = "ep.cfg"
config = ConfigParser.RawConfigParser()
config.read(CONFIG_FILE)
env.update(config._sections['ec2'])
env.update(config._sections['ep_common'])
env.update(config.... | {"/fabfile.py": ["/configure_aws.py"]} |
82,575 | dschien/ep_deploy | refs/heads/master | /configure_messaging.py | import pika
from fabric.api import *
import logging
import ConfigParser
logger = logging.getLogger(__name__)
CONFIG_FILE = "ep.cfg"
config = ConfigParser.RawConfigParser()
config.read(CONFIG_FILE)
env.forward_agent = True
env.update(config._sections['ep_common'])
env.update(config._sections['messaging.iodicus.net'])... | {"/fabfile.py": ["/configure_aws.py"]} |
82,576 | dschien/ep_deploy | refs/heads/master | /fabfile.py | import ConfigParser
import logging
from fabric.api import *
from configure_aws import get_instance_by_name
CONFIG_FILE = "ep.cfg"
config = ConfigParser.RawConfigParser()
config.read(CONFIG_FILE)
env.forward_agent = True
env.update(config._sections['ep_common'])
def prod():
env.update(config._sections['energyp... | {"/fabfile.py": ["/configure_aws.py"]} |
82,577 | dschien/ep_deploy | refs/heads/master | /fabfile-deploy-natively.py | from fabric import colors
import os, time, boto
import ConfigParser
import boto.ec2
from fabric.contrib.files import exists
__author__ = 'schien'
from fabric.api import *
GIT_ORIGIN = "git@github.com"
# The git repo is the repo we should clone
GIT_REPO = "dschien/ep_site.git"
# env.hosts = ['52.18.118.168']
DB_EN... | {"/fabfile.py": ["/configure_aws.py"]} |
82,578 | dschien/ep_deploy | refs/heads/master | /fab-aws.py | __author__ = 'schien'
from fabric.api import *
import os, time, boto
import ConfigParser
CONFIG_FILE = "ep.cfg"
ep_ubuntu_14_04 = "ami-47a23a30"
config = ConfigParser.RawConfigParser()
# If there is no config file, let's write one.
if not os.path.exists(CONFIG_FILE):
config.add_section('ec2')
config.set('e... | {"/fabfile.py": ["/configure_aws.py"]} |
82,582 | omervered0708/HW2 | refs/heads/master | /statistiscs.py | from math import ceil
def mean(values):
"""
return the mean of values
:param values: list of numeric values
:return: the mean of values
"""
sum = 0
for value in values:
sum += value
return sum/len(values)
def median(values):
"""
return the median of values
:param ... | {"/district.py": ["/data.py"], "/main.py": ["/data.py", "/district.py", "/statistiscs.py"]} |
82,583 | omervered0708/HW2 | refs/heads/master | /data.py | import pandas
class Data:
def __init__(self, path):
"""
the function loads the data from the csv file
:param path: the path to the csv file
:return: none
"""
df = pandas.read_csv(path)
self.data = df.to_dict(orient="list")
def get_all_districts(self):... | {"/district.py": ["/data.py"], "/main.py": ["/data.py", "/district.py", "/statistiscs.py"]} |
82,584 | omervered0708/HW2 | refs/heads/master | /district.py | import data
import statistics
class District:
def __init__(self, dataset):
"""
constructor for District objects
:param dataset: Data object
"""
self.dataset = dataset
def filter_district(self, letters):
"""
update 'self.dataset' to contain only data fo... | {"/district.py": ["/data.py"], "/main.py": ["/data.py", "/district.py", "/statistiscs.py"]} |
82,585 | omervered0708/HW2 | refs/heads/master | /main.py | import sys
import data
import district
import statistiscs
def main(argv):
# question 1
print("Question 1:")
# initialize dataset for question 1
dataset1 = data.Data(argv[1])
# initialize District object 'dist1'
dist1 = district.District(dataset1)
# setup for print
dist1.filter_distri... | {"/district.py": ["/data.py"], "/main.py": ["/data.py", "/district.py", "/statistiscs.py"]} |
82,596 | marciopocebon/ssy-scanner | refs/heads/master | /scanner.py | import boto.sqs, time, sys
from boto.sqs.message import Message
import boto.dynamodb2
from boto.dynamodb2.table import Table
from scanners.UpScanner import UpScanner
# Set up connections, etc
conn = boto.sqs.connect_to_region('ap-southeast-2')
q = conn.create_queue('scan-queue')
ddbcon = boto.dynamodb2.connect_to_re... | {"/scanner.py": ["/scanners/UpScanner.py"], "/scanners/UpScanner.py": ["/scanners/BaseScanner.py"]} |
82,597 | marciopocebon/ssy-scanner | refs/heads/master | /scanners/BaseScanner.py | class BaseScanner:
def __init__(self, dynamo):
self.dynamo = dynamo
def consume(self, targets):
raise NotImplementedError
| {"/scanner.py": ["/scanners/UpScanner.py"], "/scanners/UpScanner.py": ["/scanners/BaseScanner.py"]} |
82,598 | marciopocebon/ssy-scanner | refs/heads/master | /scanners/UpScanner.py | import boto.sqs, time, sys
from boto.sqs.message import Message
from boto.dynamodb2.table import Table
from libnmap.process import NmapProcess
from libnmap.parser import NmapParser, NmapParserException
from .BaseScanner import BaseScanner
class UpScanner(BaseScanner):
def consume(self, targets):
print(ta... | {"/scanner.py": ["/scanners/UpScanner.py"], "/scanners/UpScanner.py": ["/scanners/BaseScanner.py"]} |
82,599 | LucFrachon/advanced_lane_lines_detection | refs/heads/master | /camera_calibration.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
import numpy as np
import cv2
import glob
import matplotlib
matplotlib.use('TkAgg')
import matplotlib.pyplot as plt
import matplotlib.image as mpimg
import pickle
def display_images(images, titles = None, n_cols = 2, fig_size = (20, 10),
write_path = None):
'''
... | {"/line_fitting.py": ["/camera_calibration.py", "/Line_class.py"], "/lane_detection_pipeline.py": ["/camera_calibration.py", "/Line_class.py"]} |
82,600 | LucFrachon/advanced_lane_lines_detection | refs/heads/master | /line_fitting.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
import numpy as np
import cv2
import matplotlib
matplotlib.use('TkAgg')
import matplotlib.pyplot as plt
import matplotlib.image as mpimg
from camera_calibration import display_images
from binary_map_pipeline import get_warp_matrix, binary_map_pipeline
from Line_class impo... | {"/line_fitting.py": ["/camera_calibration.py", "/Line_class.py"], "/lane_detection_pipeline.py": ["/camera_calibration.py", "/Line_class.py"]} |
82,601 | LucFrachon/advanced_lane_lines_detection | refs/heads/master | /frame_extractor.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
import cv2
from moviepy.editor import VideoFileClip
import math
import os
video_file = './project_video.mp4'
images_folder = './short_test_images/'
def frange(start, stop, step = 1.):
'''
Generator that mimics range() but accepts floating point numbers.
'''
... | {"/line_fitting.py": ["/camera_calibration.py", "/Line_class.py"], "/lane_detection_pipeline.py": ["/camera_calibration.py", "/Line_class.py"]} |
82,602 | LucFrachon/advanced_lane_lines_detection | refs/heads/master | /Line_class.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
import numpy as np
class Queue():
def __init__(self, width):
'''
Initiates an instance of Queue() with width = width (number of
sub-elements in each of the queue element)
'''
self.items = []
self.width = width
def... | {"/line_fitting.py": ["/camera_calibration.py", "/Line_class.py"], "/lane_detection_pipeline.py": ["/camera_calibration.py", "/Line_class.py"]} |
82,603 | LucFrachon/advanced_lane_lines_detection | refs/heads/master | /lane_detection_pipeline.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
import numpy as np
import cv2
import matplotlib
matplotlib.use('TkAgg')
import matplotlib.pyplot as plt
import matplotlib.image as mpimg
from matplotlib.backends.backend_agg import FigureCanvasAgg
import pickle
from camera_calibration import *
from moviepy.editor import V... | {"/line_fitting.py": ["/camera_calibration.py", "/Line_class.py"], "/lane_detection_pipeline.py": ["/camera_calibration.py", "/Line_class.py"]} |
82,612 | utk-se/CodeAnalytics-distributor | refs/heads/master | /cadistributor/jobs.py |
from . import log
import pymongo
from pymongo.mongo_client import MongoClient
import bson, json, datetime
from bson.objectid import ObjectId
from bson.json_util import loads, dumps
jobtemplate = {
"url" : None,
"name" : None,
"target_commit" : None,
"target_commit_date" : None,
"status" : "unclai... | {"/cadistributor/jobs.py": ["/cadistributor/__init__.py"], "/cadistributor/worker.py": ["/cadistributor/__init__.py"], "/setup.py": ["/cadistributor/__init__.py"], "/cadistributor/app.py": ["/cadistributor/__init__.py"]} |
82,613 | utk-se/CodeAnalytics-distributor | refs/heads/master | /gunicorn-config.py |
reload = True
pidfile = "gunicorn.pid"
bind = ['127.0.0.1:8000', 'unix:ca-core.sock', '[::1]:8000']
worker_class = "gthread"
workers = 4
def on_reload(server):
pass
def when_ready(server):
pass
def on_exit(server):
pass
| {"/cadistributor/jobs.py": ["/cadistributor/__init__.py"], "/cadistributor/worker.py": ["/cadistributor/__init__.py"], "/setup.py": ["/cadistributor/__init__.py"], "/cadistributor/app.py": ["/cadistributor/__init__.py"]} |
82,614 | utk-se/CodeAnalytics-distributor | refs/heads/master | /cadistributor/__init__.py | #!/usr/bin/env python3
"""CA Distributor
Includes job server and worker that will distribute generic json/bson job items.
cadistributor.worker can be run as a program. (__main__)
cadistributor.app:app should be run with a flask server. (like gunicorn)
"""
__version__ = "0.0.2"
| {"/cadistributor/jobs.py": ["/cadistributor/__init__.py"], "/cadistributor/worker.py": ["/cadistributor/__init__.py"], "/setup.py": ["/cadistributor/__init__.py"], "/cadistributor/app.py": ["/cadistributor/__init__.py"]} |
82,615 | utk-se/CodeAnalytics-distributor | refs/heads/master | /cadistributor/worker.py | #!/usr/bin/env python
import argparse, datetime, json, os, time
import shutil
import importlib
import requests, toml
from bson import json_util
from bson.json_util import loads, dumps
import pygit2 as git
from requests.auth import HTTPBasicAuth
from . import log
config = {}
class JobClaimFail(RuntimeError):
pass... | {"/cadistributor/jobs.py": ["/cadistributor/__init__.py"], "/cadistributor/worker.py": ["/cadistributor/__init__.py"], "/setup.py": ["/cadistributor/__init__.py"], "/cadistributor/app.py": ["/cadistributor/__init__.py"]} |
82,616 | utk-se/CodeAnalytics-distributor | refs/heads/master | /setup.py | from setuptools import setup, find_packages
import cadistributor as mainmodule
with open("README.md", "r") as f:
readme = f.read()
setup(
name='CA Distributor',
version=mainmodule.__version__,
description="CodeAnalytics Distributor",
long_description=readme,
long_description_content_type="tex... | {"/cadistributor/jobs.py": ["/cadistributor/__init__.py"], "/cadistributor/worker.py": ["/cadistributor/__init__.py"], "/setup.py": ["/cadistributor/__init__.py"], "/cadistributor/app.py": ["/cadistributor/__init__.py"]} |
82,617 | utk-se/CodeAnalytics-distributor | refs/heads/master | /cadistributor/app.py |
import secrets
import subprocess
import flask
from . import log, jobs
from bson.json_util import loads, dumps
from flask import request
from flask_httpauth import HTTPBasicAuth
app = flask.Flask(__name__)
auth = HTTPBasicAuth()
log.setLevel(log.DEBUG)
log.info("Setting up app...")
log.info("Getting SESSIONKEY...")
... | {"/cadistributor/jobs.py": ["/cadistributor/__init__.py"], "/cadistributor/worker.py": ["/cadistributor/__init__.py"], "/setup.py": ["/cadistributor/__init__.py"], "/cadistributor/app.py": ["/cadistributor/__init__.py"]} |
82,618 | Dramicas/castero | refs/heads/master | /castero/__init__.py | __title__ = "castero"
__description__ = "Command line podcast client"
__keywords__ = "podcast commandline terminal curses"
__author__ = "Jake Robertson"
__author_email__ = "jake@faltro.com"
__version__ = "0.2.3"
__date__ = "2018-05-03"
__copyright__ = "Copyright (c) 2018 Jake Robertson... | {"/tests/test_player.py": ["/castero/player.py"], "/castero/__main__.py": ["/castero/__init__.py", "/castero/display.py", "/castero/feeds.py", "/castero/player.py"], "/tests/test_display.py": ["/castero/__init__.py", "/castero/display.py"], "/tests/test_queue.py": ["/castero/player.py"], "/castero/display.py": ["/caste... |
82,619 | Dramicas/castero | refs/heads/master | /tests/test_player.py | import os
import vlc
import pytest
import castero.player as player
my_dir = os.path.dirname(os.path.realpath(__file__))
def test_player_init():
myplayer = player.Player("MLK Dream", my_dir + "/media/MLK_Dream_10s.mp3")
assert isinstance(myplayer, player.Player)
def test_player_play():
myplayer = player... | {"/tests/test_player.py": ["/castero/player.py"], "/castero/__main__.py": ["/castero/__init__.py", "/castero/display.py", "/castero/feeds.py", "/castero/player.py"], "/tests/test_display.py": ["/castero/__init__.py", "/castero/display.py"], "/tests/test_queue.py": ["/castero/player.py"], "/castero/display.py": ["/caste... |
82,620 | Dramicas/castero | refs/heads/master | /tests/test_feed.py | import os
import pytest
import castero.feed as feed
my_dir = os.path.dirname(os.path.realpath(__file__))
def test_feed_validation_valid():
myfeed = feed.Feed(file=my_dir+"/feeds/valid_basic.xml")
assert isinstance(myfeed, feed.Feed)
assert myfeed.validated
def test_feed_validations_is_rss():
with p... | {"/tests/test_player.py": ["/castero/player.py"], "/castero/__main__.py": ["/castero/__init__.py", "/castero/display.py", "/castero/feeds.py", "/castero/player.py"], "/tests/test_display.py": ["/castero/__init__.py", "/castero/display.py"], "/tests/test_queue.py": ["/castero/player.py"], "/castero/display.py": ["/caste... |
82,621 | Dramicas/castero | refs/heads/master | /tests/test_datafile.py | import os
from castero.datafile import DataFile
from castero.downloadqueue import DownloadQueue
def test_datafile_download():
mydownloadqueue = DownloadQueue()
url = "https://travis-ci.org/"
DataFile.download_to_file(
url, "datafile_download_temp",
"datafile download name", mydownloadqueue... | {"/tests/test_player.py": ["/castero/player.py"], "/castero/__main__.py": ["/castero/__init__.py", "/castero/display.py", "/castero/feeds.py", "/castero/player.py"], "/tests/test_display.py": ["/castero/__init__.py", "/castero/display.py"], "/tests/test_queue.py": ["/castero/player.py"], "/castero/display.py": ["/caste... |
82,622 | Dramicas/castero | refs/heads/master | /castero/__main__.py | import sys
import curses
import threading
import castero
from castero import helpers
from castero.display import Display
from castero.config import Config
from castero.feeds import Feeds
from castero.player import Player
def main():
# check if user is running the client with an info flag
info_flags = {
... | {"/tests/test_player.py": ["/castero/player.py"], "/castero/__main__.py": ["/castero/__init__.py", "/castero/display.py", "/castero/feeds.py", "/castero/player.py"], "/tests/test_display.py": ["/castero/__init__.py", "/castero/display.py"], "/tests/test_queue.py": ["/castero/player.py"], "/castero/display.py": ["/caste... |
82,623 | Dramicas/castero | refs/heads/master | /tests/test_config.py | import pytest
import os
from shutil import copyfile
import castero.config as config
my_dir = os.path.dirname(os.path.realpath(__file__))
def test_config_default(prevent_modification):
myconfig = config.Config()
assert isinstance(myconfig, config.Config)
def test_config_parse_error(prevent_modification):
... | {"/tests/test_player.py": ["/castero/player.py"], "/castero/__main__.py": ["/castero/__init__.py", "/castero/display.py", "/castero/feeds.py", "/castero/player.py"], "/tests/test_display.py": ["/castero/__init__.py", "/castero/display.py"], "/tests/test_queue.py": ["/castero/player.py"], "/castero/display.py": ["/caste... |
82,624 | Dramicas/castero | refs/heads/master | /castero/player.py | import vlc
import time
class PlayerError(Exception):
"""An ambiguous error while handling the player.
"""
class PlayerDependencyError(PlayerError):
"""A dependency for playing the player was not met."""
class PlayerCreateError(PlayerError):
"""An error occurred while creating the player.
"""
... | {"/tests/test_player.py": ["/castero/player.py"], "/castero/__main__.py": ["/castero/__init__.py", "/castero/display.py", "/castero/feeds.py", "/castero/player.py"], "/tests/test_display.py": ["/castero/__init__.py", "/castero/display.py"], "/tests/test_queue.py": ["/castero/player.py"], "/castero/display.py": ["/caste... |
82,625 | Dramicas/castero | refs/heads/master | /tests/test_display.py | import os
import curses
import pytest
import castero
from castero.display import Display, DisplaySizeError
from castero.feed import Feed, FeedLoadError, FeedStructureError, \
FeedParseError
from castero.episode import Episode
my_dir = os.path.dirname(os.path.realpath(__file__))
def test_display_init(display):
... | {"/tests/test_player.py": ["/castero/player.py"], "/castero/__main__.py": ["/castero/__init__.py", "/castero/display.py", "/castero/feeds.py", "/castero/player.py"], "/tests/test_display.py": ["/castero/__init__.py", "/castero/display.py"], "/tests/test_queue.py": ["/castero/player.py"], "/castero/display.py": ["/caste... |
82,626 | Dramicas/castero | refs/heads/master | /castero/feeds.py | import os
import json
from castero.datafile import DataFile
from castero.feed import Feed
from castero.episode import Episode
class FeedsError(Exception):
"""An ambiguous error while handling the feeds.
"""
class Feeds(DataFile):
"""The Feeds class.
Reads and stores information about the user's fee... | {"/tests/test_player.py": ["/castero/player.py"], "/castero/__main__.py": ["/castero/__init__.py", "/castero/display.py", "/castero/feeds.py", "/castero/player.py"], "/tests/test_display.py": ["/castero/__init__.py", "/castero/display.py"], "/tests/test_queue.py": ["/castero/player.py"], "/castero/display.py": ["/caste... |
82,627 | Dramicas/castero | refs/heads/master | /tests/test_queue.py | import os
import vlc
from castero.queue import Queue
from castero.player import Player
from castero.config import Config
my_dir = os.path.dirname(os.path.realpath(__file__))
config = Config()
player1 = Player("MLK Dream", my_dir + "/media/MLK_Dream_10s.mp3")
player2 = Player("MLK Dream", my_dir + "/media/MLK_Dream_10... | {"/tests/test_player.py": ["/castero/player.py"], "/castero/__main__.py": ["/castero/__init__.py", "/castero/display.py", "/castero/feeds.py", "/castero/player.py"], "/tests/test_display.py": ["/castero/__init__.py", "/castero/display.py"], "/tests/test_queue.py": ["/castero/player.py"], "/castero/display.py": ["/caste... |
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