index int64 | repo_name string | branch_name string | path string | content string | import_graph string |
|---|---|---|---|---|---|
16,374 | wordwarrior01/MultiFileReader | refs/heads/master | /modules/file_handler.py | #
# Nimish Nayak
# 10-06-2017
#
# required libraries
import logging
import os
from utils import Utils
# File Hander
# This module will handle all the file handling operations
class FileHandler():
# initialize the instance variables
def __init__(self, input_file, output_file=None):
self.input_file =... | {"/main.py": ["/modules/utils.py"]} |
16,375 | wordwarrior01/MultiFileReader | refs/heads/master | /modules/xml_parser.py | #
# Nimish Nayak
# 10-06-2017
#
#
# XML Parser
#
# required libraries
import logging
import xml.dom.minidom
from parser import Parser
from utils import Utils
class XmlParser(Parser):
# initialize the instance variables
def __init__(self, input_file):
# call the base class constructor
Parser.__ini... | {"/main.py": ["/modules/utils.py"]} |
16,376 | wordwarrior01/MultiFileReader | refs/heads/master | /modules/csv_parser.py | #
# Nimish Nayak
# 10-06-2017
#
#
# CSV Parser
#
# required libraries
import logging
import csv
from parser import Parser
from utils import Utils
class CsvParser(Parser):
# initialize the instance variables
def __init__(self, input_file):
# call the base class constructor
Parser.__init__(se... | {"/main.py": ["/modules/utils.py"]} |
16,377 | wordwarrior01/MultiFileReader | refs/heads/master | /modules/xml_parser_test.py | #
# Nimish Nayak
# 10-06-2017
#
#
# Xml Parser - Class Tests
#
from xml_parser import XmlParser
import os
test_file = os.path.join(os.getcwd(),"Test.xml")
def test_xml_parser_with_missing_values():
global test_file
# value missing
with open(test_file,"w")as f:
f.write("""<?xml versi... | {"/main.py": ["/modules/utils.py"]} |
16,378 | wordwarrior01/MultiFileReader | refs/heads/master | /modules/parser.py | #
# Nimish Nayak
# 10-06-2017
#
#
# Parser - Base Class
#
# required libraries
import logging
from abc import ABCMeta, abstractmethod
class Parser():
__metaclass__ = ABCMeta
# initialize the instance variables
def __init__(self, input_file):
self.input_file = input_file
self.data = [... | {"/main.py": ["/modules/utils.py"]} |
16,412 | ademaro/teahouse | refs/heads/master | /blog/models.py | # -*- coding: utf-8 -*-
from django.db import models
from pyadmin import verbose_name_cases, verbose_name_field_cases
class Category(models.Model):
name = models.CharField(verbose_name = verbose_name_field_cases(u'категория', sort = u'категории', add = u'категорию'), max_length=250, unique=True)
def __unicod... | {"/blog/models.py": ["/pyadmin.py"], "/pytils/test/templatetags/test_common.py": ["/pytils/__init__.py"], "/pytils/test/templatetags/test_translit.py": ["/pytils/test/templatetags/__init__.py"], "/blog/admin.py": ["/blog/models.py"]} |
16,413 | ademaro/teahouse | refs/heads/master | /pytils/test/templatetags/helpers.py | # -*- coding: utf-8 -*-
# pytils - russian-specific string utils
# Copyright (C) 2006-2008 Yury Yurevich
#
# http://www.pyobject.ru/projects/pytils/
#
# This program is free software; you can redistribute it and/or
# modify it under the terms of the GNU General Public License
# as published by the Free Software Founda... | {"/blog/models.py": ["/pyadmin.py"], "/pytils/test/templatetags/test_common.py": ["/pytils/__init__.py"], "/pytils/test/templatetags/test_translit.py": ["/pytils/test/templatetags/__init__.py"], "/blog/admin.py": ["/blog/models.py"]} |
16,414 | ademaro/teahouse | refs/heads/master | /urls.py | # -*- coding: utf-8 -*-
from django.conf.urls import patterns, include, url
from django.contrib import admin
from django.conf import settings
admin.autodiscover()
urlpatterns = patterns('',
# Examples:
# url(r'^$', '_tea.views.home', name='home'),
# url(r'^_tea/', include('_tea.foo.urls')),
url(r'^$... | {"/blog/models.py": ["/pyadmin.py"], "/pytils/test/templatetags/test_common.py": ["/pytils/__init__.py"], "/pytils/test/templatetags/test_translit.py": ["/pytils/test/templatetags/__init__.py"], "/blog/admin.py": ["/blog/models.py"]} |
16,415 | ademaro/teahouse | refs/heads/master | /pyadmin.py | # -*- coding: utf-8 -*-
"""
NEVER EVER WRITE CODE LIKE THIS!
"""
import traceback
import sys
import re
from django.db import models
from django.contrib import messages
from django.contrib.admin import ModelAdmin
from pytils.numeral import get_plural
#import django.contrib.admin.util
class verbose_name_field_cas... | {"/blog/models.py": ["/pyadmin.py"], "/pytils/test/templatetags/test_common.py": ["/pytils/__init__.py"], "/pytils/test/templatetags/test_translit.py": ["/pytils/test/templatetags/__init__.py"], "/blog/admin.py": ["/blog/models.py"]} |
16,416 | ademaro/teahouse | refs/heads/master | /pytils/test/templatetags/test_common.py | # -*- coding: utf-8 -*-
# pytils - russian-specific string utils
# Copyright (C) 2006-2008 Yury Yurevich
#
# http://www.pyobject.ru/projects/pytils/
#
# This program is free software; you can redistribute it and/or
# modify it under the terms of the GNU General Public License
# as published by the Free Software Founda... | {"/blog/models.py": ["/pyadmin.py"], "/pytils/test/templatetags/test_common.py": ["/pytils/__init__.py"], "/pytils/test/templatetags/test_translit.py": ["/pytils/test/templatetags/__init__.py"], "/blog/admin.py": ["/blog/models.py"]} |
16,417 | ademaro/teahouse | refs/heads/master | /blog/views.py | # -*- coding: utf-8 -*-
from django.core.paginator import Paginator, EmptyPage, PageNotAnInteger
from django.http import Http404
from django.shortcuts import render_to_response
from _tea.blog.models import Entry, Category
from datetime import datetime
def index(request):
if not request.session.get('bred'):
... | {"/blog/models.py": ["/pyadmin.py"], "/pytils/test/templatetags/test_common.py": ["/pytils/__init__.py"], "/pytils/test/templatetags/test_translit.py": ["/pytils/test/templatetags/__init__.py"], "/blog/admin.py": ["/blog/models.py"]} |
16,418 | ademaro/teahouse | refs/heads/master | /pytils/test/templatetags/__init__.py | # -*- coding: utf-8 -*-
# pytils - russian-specific string utils
# Copyright (C) 2006-2008 Yury Yurevich
#
# http://www.pyobject.ru/projects/pytils/
#
# This program is free software; you can redistribute it and/or
# modify it under the terms of the GNU General Public License
# as published by the Free Software Founda... | {"/blog/models.py": ["/pyadmin.py"], "/pytils/test/templatetags/test_common.py": ["/pytils/__init__.py"], "/pytils/test/templatetags/test_translit.py": ["/pytils/test/templatetags/__init__.py"], "/blog/admin.py": ["/blog/models.py"]} |
16,419 | ademaro/teahouse | refs/heads/master | /pytils/__init__.py | # -*- coding: utf-8 -*-
# pytils - russian-specific string utils
# Copyright (C) 2006-2008 Yury Yurevich
#
# http://www.pyobject.ru/projects/pytils/
#
# This program is free software; you can redistribute it and/or
# modify it under the terms of the GNU General Public License
# as published by the Free Software Founda... | {"/blog/models.py": ["/pyadmin.py"], "/pytils/test/templatetags/test_common.py": ["/pytils/__init__.py"], "/pytils/test/templatetags/test_translit.py": ["/pytils/test/templatetags/__init__.py"], "/blog/admin.py": ["/blog/models.py"]} |
16,420 | ademaro/teahouse | refs/heads/master | /pytils/test/templatetags/test_translit.py | # -*- coding: utf-8 -*-
# pytils - russian-specific string utils
# Copyright (C) 2006-2008 Yury Yurevich
#
# http://www.pyobject.ru/projects/pytils/
#
# This program is free software; you can redistribute it and/or
# modify it under the terms of the GNU General Public License
# as published by the Free Software Founda... | {"/blog/models.py": ["/pyadmin.py"], "/pytils/test/templatetags/test_common.py": ["/pytils/__init__.py"], "/pytils/test/templatetags/test_translit.py": ["/pytils/test/templatetags/__init__.py"], "/blog/admin.py": ["/blog/models.py"]} |
16,421 | ademaro/teahouse | refs/heads/master | /blog/admin.py | # -*- coding: utf-8 -*-
from django.contrib import admin
from blog.models import Category, Entry
import settings
media = settings.MEDIA_URL
class CategoryAdmin(admin.ModelAdmin):
list_display = ('name',)
search_fields = ('name',)
class EntryAdmin(admin.ModelAdmin):
list_display = ('title', 'date_publicat... | {"/blog/models.py": ["/pyadmin.py"], "/pytils/test/templatetags/test_common.py": ["/pytils/__init__.py"], "/pytils/test/templatetags/test_translit.py": ["/pytils/test/templatetags/__init__.py"], "/blog/admin.py": ["/blog/models.py"]} |
16,422 | rasakereh/time-series-predictors | refs/heads/master | /src/MLShepard.py | import numpy as np
import faiss
from .utils import rolling_window
class MLShepard:
def __init__(
self,
future_scope=3,
dimension=10,
minor_days=3,
trust_treshold=4,
max_point_usage=5,
avr_elemwise_dist=0.04,
epsilon=1e-10
):
self.future_sc... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,423 | rasakereh/time-series-predictors | refs/heads/master | /master.py | import numpy as np
import pandas as pd
from dfply import *
from pprint import pprint
from os import listdir
from os.path import isfile, join
from time import time
import datetime
import matplotlib.pyplot as plt
from src.utils import rolling_window, NumpyEncoder
from src.GBL import GBLM
from src.MLShepard import MLShepa... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,424 | rasakereh/time-series-predictors | refs/heads/master | /data/cryptos/prep.py | import pandas as pd
from dfply import X, arrange
def loadPriceIndex(dataFile):
priceIndex = pd.read_csv(dataFile)
priceIndex["Price"] = priceIndex.apply(lambda x: x.Price if isinstance(x.Price, float) else float(x.Price.replace(',', '')), axis=1)
priceIndex["Date"] = priceIndex["Date"].astype("datetime64[... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,425 | rasakereh/time-series-predictors | refs/heads/master | /src/OSVR.py | """Implementation of Online Support Vector Regression (OSVR) as library for a class project in 16-831
Statistical Techniques in Robotics.
Requires Python 3.5
Author: Adam Werries, awerries@cmu.edu, 12/2015.
Adapted from MATLAB code available at http://onlinesvr.altervista.org/
Parameters defined in main() below. C ... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,426 | rasakereh/time-series-predictors | refs/heads/master | /src/utils.py | import numpy as np
import json
def rolling_window(a, window):
shape = a.shape[:-1] + (a.shape[-1] - window + 1, window)
strides = a.strides + (a.strides[-1],)
return np.lib.stride_tricks.as_strided(a, shape=shape, strides=strides)
class NumpyEncoder(json.JSONEncoder):
def default(self, obj):
i... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,427 | rasakereh/time-series-predictors | refs/heads/master | /src/WHLR.py | import numpy as np
from sklearn.linear_model import LinearRegression as LR
from sklearn.kernel_approximation import RBFSampler
from .utils import rolling_window
class WHLR:
def __init__(
self,
future_scope=3,
dimension=10,
avr_elemwise_dist=0.04,
learning_rate=1e-2
):
... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,428 | rasakereh/time-series-predictors | refs/heads/master | /src/OARIMA.py | import numpy as np
import pmdarima as pm
from math import sqrt
from .utils import rolling_window
class OARIMA:
def __init__(
self,
dimension=10,
lrate=1e-2,
epsilon=1e-10,
method='ogd'
):
self.dimension = dimension
self.lrate = lrate
self.epsilon ... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,429 | rasakereh/time-series-predictors | refs/heads/master | /src/RandConLSTM.py | import numpy as np
import math
import torch
from torch import nn, optim
# from torch.autograd import Variable
from torch.nn.utils import clip_grad_norm
from collections import OrderedDict
import pandas as pd
from .RCLSTM import rclstm
from .RCLSTM.rclstm import RNN
from .utils import rolling_window
loss_fn = nn.MSE... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,430 | rasakereh/time-series-predictors | refs/heads/master | /results/dumps.py | from os import listdir
from os.path import join, isfile
import json
import numpy as np
dataDir = '../dumps'
dataFiles = {f: join(dataDir, f) for f in listdir(dataDir) if isfile(join(dataDir, f)) and f[-4:] == '.dmp'}
# print(list(dataFiles.keys()))
for f in dataFiles:
dump = open(dataFiles[f], 'r')
res = jso... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,431 | rasakereh/time-series-predictors | refs/heads/master | /data/RTcryptos/AAA_delta.py | import pandas as pd
from dfply import X, arrange, mutate, drop
import numpy as np
from os import listdir
from os.path import isfile
csvFiles = [f for f in listdir('.') if isfile(f) and f[-4:] == '.csv']
def loadPriceIndex(dataFile):
priceIndex = pd.read_csv(dataFile) >> arrange(X.Date)
dates = priceIndex['D... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,432 | rasakereh/time-series-predictors | refs/heads/master | /src/MondrianForest.py | import numpy as np
import math
from .MF.mondrianforest import MondrianForest as MondrianForest_Main
from .MF.mondrianforest_utils import precompute_minimal
from .utils import rolling_window
def prepareData(X, f, settings, single=False):
data = {
'x_train': X,
'y_train': f,
'n_dim': X.shape[... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,433 | rasakereh/time-series-predictors | refs/heads/master | /src/GBL.py | import numpy as np
from .utils import rolling_window
# parameters (except epsilon) offered by https://link.springer.com/article/10.1007/s00521-016-2314-8
class GBLM:
def __init__(
self,
dimension=10,
epsilon=5e-3,
forgetting_rate=.59,
p_learning_rate=.008,
s_learning... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,434 | rasakereh/time-series-predictors | refs/heads/master | /data/RTcryptos/AAA_prep.py | import pandas as pd
from dfply import X, arrange, mutate, drop
from os import listdir
from os.path import isfile
csvFiles = [f for f in listdir('.') if isfile(f) and f[-4:] == '.csv']
header = 'id|Price|volume|timestamp|buy\n'
def loadPriceIndex(dataFile):
original = open(dataFile, 'r')
data = header + ori... | {"/src/MLShepard.py": ["/src/utils.py"], "/master.py": ["/src/utils.py", "/src/GBL.py", "/src/MLShepard.py", "/src/MondrianForest.py", "/src/OARIMA.py", "/src/OSVR.py", "/src/RandConLSTM.py", "/src/WHLR.py"], "/src/OSVR.py": ["/src/utils.py"], "/src/WHLR.py": ["/src/utils.py"], "/src/OARIMA.py": ["/src/utils.py"], "/sr... |
16,611 | Archieyoung/SVAN | refs/heads/master | /range_compare.py | """
Author: ArchieYoung <yangqi2@grandomics.com>
Time: Thu Jul 5 09:24:07 CST 2018
"""
import os
import subprocess
from bed_intersect import intersect_f
from table_check import TableCheck
def RangeCompare(bedtools, bedA, bedB, min_overlap, tmp_dir, prefix,db_id):
# result sv dict, key: query sv id, value: db fie... | {"/range_compare.py": ["/bed_intersect.py", "/table_check.py"], "/svan.py": ["/sv_vcf.py", "/pubdb_prepare.py", "/range_compare.py", "/insertion_compare.py", "/traslocation_compare.py"], "/pubdb_prepare.py": ["/sv_vcf.py"], "/traslocation_compare.py": ["/bed_intersect.py", "/table_check.py"], "/insertion_compare.py": [... |
16,612 | Archieyoung/SVAN | refs/heads/master | /format_result.py | """
Author: ArchieYoung <yangqi2@grandomics.com>
Time: Thu Jul 5 09:24:07 CST 2018
"""
"""
db fields "chrom","start","end","svtype","annot1","annot2","annot3"...
format: "annot1;annot1","annot2,annot2";"annot3;annot3","chrom:start-end,svtype;..."
if multiple result is founded in database, write all feature in one co... | {"/range_compare.py": ["/bed_intersect.py", "/table_check.py"], "/svan.py": ["/sv_vcf.py", "/pubdb_prepare.py", "/range_compare.py", "/insertion_compare.py", "/traslocation_compare.py"], "/pubdb_prepare.py": ["/sv_vcf.py"], "/traslocation_compare.py": ["/bed_intersect.py", "/table_check.py"], "/insertion_compare.py": [... |
16,613 | Archieyoung/SVAN | refs/heads/master | /table_check.py | """
Author: ArchieYoung <yangqi2@grandomics.com>
Time: Thu Jul 5 09:24:07 CST 2018
"""
def TableCheck(table):
"""
check if the table have consistent field number of each row
return field number of the table
"""
with open(table,"r") as io:
# skip comment lines
check_momment_line = ... | {"/range_compare.py": ["/bed_intersect.py", "/table_check.py"], "/svan.py": ["/sv_vcf.py", "/pubdb_prepare.py", "/range_compare.py", "/insertion_compare.py", "/traslocation_compare.py"], "/pubdb_prepare.py": ["/sv_vcf.py"], "/traslocation_compare.py": ["/bed_intersect.py", "/table_check.py"], "/insertion_compare.py": [... |
16,614 | Archieyoung/SVAN | refs/heads/master | /svan.py | #!/usr/bin/env python3
"""
author: archieyoung<yangqi2@grandomics.com>
SVAN: A Struture Variation Annotation Tool
"""
import sys
import os
import subprocess
import operator
import argparse
import logging
from multiprocessing import Pool
from glob import iglob
import sv_vcf
import pubdb_prepare
from range_compare impo... | {"/range_compare.py": ["/bed_intersect.py", "/table_check.py"], "/svan.py": ["/sv_vcf.py", "/pubdb_prepare.py", "/range_compare.py", "/insertion_compare.py", "/traslocation_compare.py"], "/pubdb_prepare.py": ["/sv_vcf.py"], "/traslocation_compare.py": ["/bed_intersect.py", "/table_check.py"], "/insertion_compare.py": [... |
16,615 | Archieyoung/SVAN | refs/heads/master | /bed_intersect.py | """
Author: ArchieYoung <yangqi2@grandomics.com>
Time: Thu Jul 5 09:24:07 CST 2018
"""
class intersect_f(object):
def __init__(self, fields, query_field_num):
(self.query_chrom, self.query_start, self.query_end, self.query_svtype,
self.query_svid) = fields[:5]
(self.db_chrom, self.... | {"/range_compare.py": ["/bed_intersect.py", "/table_check.py"], "/svan.py": ["/sv_vcf.py", "/pubdb_prepare.py", "/range_compare.py", "/insertion_compare.py", "/traslocation_compare.py"], "/pubdb_prepare.py": ["/sv_vcf.py"], "/traslocation_compare.py": ["/bed_intersect.py", "/table_check.py"], "/insertion_compare.py": [... |
16,616 | Archieyoung/SVAN | refs/heads/master | /pubdb_prepare.py | #!/usr/bin/env python3
"""
prepare SV database for annotation
convert 1000genome, DGV, dbVar SV files into bed files
"""
import sys
import gzip
import logging
import operator
import os
from glob import iglob
from datetime import date
from sv_vcf import SV
# 1000genome
class one_thousand_sv(object):
def __init__... | {"/range_compare.py": ["/bed_intersect.py", "/table_check.py"], "/svan.py": ["/sv_vcf.py", "/pubdb_prepare.py", "/range_compare.py", "/insertion_compare.py", "/traslocation_compare.py"], "/pubdb_prepare.py": ["/sv_vcf.py"], "/traslocation_compare.py": ["/bed_intersect.py", "/table_check.py"], "/insertion_compare.py": [... |
16,617 | Archieyoung/SVAN | refs/heads/master | /sv_vcf.py | """
A Universal Stucture Variant VCF parsing module
tested vcf: sniffles vcf, nanosv vcf, picky vcf
shared INFO ID are: SVTYPE, END, SVLEN
RE(reads evidence): sniffles, picky; nano SV: RT(2d,template,complement)
BND shared format: N[ref:pos2[
BND format:
N]chr6:25647927]
STAT REF ALT Meaning
s1 s t[p[ p... | {"/range_compare.py": ["/bed_intersect.py", "/table_check.py"], "/svan.py": ["/sv_vcf.py", "/pubdb_prepare.py", "/range_compare.py", "/insertion_compare.py", "/traslocation_compare.py"], "/pubdb_prepare.py": ["/sv_vcf.py"], "/traslocation_compare.py": ["/bed_intersect.py", "/table_check.py"], "/insertion_compare.py": [... |
16,618 | Archieyoung/SVAN | refs/heads/master | /traslocation_compare.py | """
Author: ArchieYoung <yangqi2@grandomics.com>
Time: Thu Jul 5 09:24:07 CST 2018
"""
import os
import subprocess
import sys
from bed_intersect import intersect_f
from table_check import TableCheck
def TraCompare(bedtools, bedA, bedB, max_dist, tmp_dir, prefix, db_id):
# result sv dict, key: query sv id, value:... | {"/range_compare.py": ["/bed_intersect.py", "/table_check.py"], "/svan.py": ["/sv_vcf.py", "/pubdb_prepare.py", "/range_compare.py", "/insertion_compare.py", "/traslocation_compare.py"], "/pubdb_prepare.py": ["/sv_vcf.py"], "/traslocation_compare.py": ["/bed_intersect.py", "/table_check.py"], "/insertion_compare.py": [... |
16,619 | Archieyoung/SVAN | refs/heads/master | /insertion_compare.py | """
Author: ArchieYoung <yangqi2@grandomics.com>
Time: Thu Jul 5 09:24:07 CST 2018
"""
import os
import subprocess
from bed_intersect import intersect_f
from table_check import TableCheck
def InsCompare(bedtools, bedA, bedB, max_dist, tmp_dir, prefix, db_id):
# result sv dict, key: query sv id, value: db field... | {"/range_compare.py": ["/bed_intersect.py", "/table_check.py"], "/svan.py": ["/sv_vcf.py", "/pubdb_prepare.py", "/range_compare.py", "/insertion_compare.py", "/traslocation_compare.py"], "/pubdb_prepare.py": ["/sv_vcf.py"], "/traslocation_compare.py": ["/bed_intersect.py", "/table_check.py"], "/insertion_compare.py": [... |
16,620 | Archieyoung/SVAN | refs/heads/master | /local_database_prepare.py | """
Author: ArchieYoung <yangqi2@grandomics.com>
Time: Thu Jul 5 09:24:07 CST 2018
"""
import sys
import argparse
import os
from multiprocessing import Pool
from glob import iglob
from sv_vcf import SV
def vcf_to_db_bed(_args):
vcf, min_support_reads, out_dir, sv_id_prefix = _args
with open(vcf, "r") as... | {"/range_compare.py": ["/bed_intersect.py", "/table_check.py"], "/svan.py": ["/sv_vcf.py", "/pubdb_prepare.py", "/range_compare.py", "/insertion_compare.py", "/traslocation_compare.py"], "/pubdb_prepare.py": ["/sv_vcf.py"], "/traslocation_compare.py": ["/bed_intersect.py", "/table_check.py"], "/insertion_compare.py": [... |
16,628 | idlesign/deflacue | refs/heads/master | /setup.py | import io
import os
import re
import sys
from setuptools import setup
PATH_BASE = os.path.dirname(__file__)
def read_file(fpath):
"""Reads a file within package directories."""
with io.open(os.path.join(PATH_BASE, fpath)) as f:
return f.read()
def get_version():
"""Returns version number, with... | {"/deflacue/cli.py": ["/deflacue/deflacue.py"], "/deflacue/parser.py": ["/deflacue/exceptions.py"], "/tests/test_basic.py": ["/deflacue/deflacue.py", "/deflacue/exceptions.py"], "/deflacue/deflacue.py": ["/deflacue/exceptions.py", "/deflacue/parser.py"]} |
16,629 | idlesign/deflacue | refs/heads/master | /deflacue/cli.py | import argparse
import logging
from .deflacue import Deflacue, DeflacueError
def main():
argparser = argparse.ArgumentParser('deflacue')
argparser.add_argument(
'source_path', help='Absolute or relative source path with .cue file(s).')
argparser.add_argument(
'-r', help='Recursion flag ... | {"/deflacue/cli.py": ["/deflacue/deflacue.py"], "/deflacue/parser.py": ["/deflacue/exceptions.py"], "/tests/test_basic.py": ["/deflacue/deflacue.py", "/deflacue/exceptions.py"], "/deflacue/deflacue.py": ["/deflacue/exceptions.py", "/deflacue/parser.py"]} |
16,630 | idlesign/deflacue | refs/heads/master | /deflacue/__init__.py | VERSION = (2, 0, 1) | {"/deflacue/cli.py": ["/deflacue/deflacue.py"], "/deflacue/parser.py": ["/deflacue/exceptions.py"], "/tests/test_basic.py": ["/deflacue/deflacue.py", "/deflacue/exceptions.py"], "/deflacue/deflacue.py": ["/deflacue/exceptions.py", "/deflacue/parser.py"]} |
16,631 | idlesign/deflacue | refs/heads/master | /deflacue/parser.py | import logging
from copy import deepcopy
from pathlib import Path
from typing import List, Optional, Tuple
from .exceptions import ParserError
LOGGER = logging.getLogger(__name__)
def pos_to_frames(pos) -> int:
"""Converts position (mm:ss:ff) into frames.
:param pos:
"""
minutes, seconds, frames =... | {"/deflacue/cli.py": ["/deflacue/deflacue.py"], "/deflacue/parser.py": ["/deflacue/exceptions.py"], "/tests/test_basic.py": ["/deflacue/deflacue.py", "/deflacue/exceptions.py"], "/deflacue/deflacue.py": ["/deflacue/exceptions.py", "/deflacue/parser.py"]} |
16,632 | idlesign/deflacue | refs/heads/master | /deflacue/exceptions.py |
class DeflacueError(Exception):
"""Exception type raised by deflacue."""
class ParserError(Exception):
"""Cue file parser error."""
| {"/deflacue/cli.py": ["/deflacue/deflacue.py"], "/deflacue/parser.py": ["/deflacue/exceptions.py"], "/tests/test_basic.py": ["/deflacue/deflacue.py", "/deflacue/exceptions.py"], "/deflacue/deflacue.py": ["/deflacue/exceptions.py", "/deflacue/parser.py"]} |
16,633 | idlesign/deflacue | refs/heads/master | /tests/test_basic.py | import logging
from collections import deque
from pathlib import Path
import pytest
from deflacue.deflacue import CueParser, Deflacue
from deflacue.exceptions import ParserError
class TestParser:
def test_encoding(self, datafix_dir):
fpath = datafix_dir / 'vys2.cue'
with pytest.raises(ParserE... | {"/deflacue/cli.py": ["/deflacue/deflacue.py"], "/deflacue/parser.py": ["/deflacue/exceptions.py"], "/tests/test_basic.py": ["/deflacue/deflacue.py", "/deflacue/exceptions.py"], "/deflacue/deflacue.py": ["/deflacue/exceptions.py", "/deflacue/parser.py"]} |
16,634 | idlesign/deflacue | refs/heads/master | /deflacue/deflacue.py | """
deflacue is a Cue Sheet parser and a wrapper for mighty SoX utility - http://sox.sourceforge.net/.
SoX with appropriate plugins should be installed for deflacue to function.
Ubuntu users may install the following SoX packages: `sox`, `libsox-fmt-all`.
deflacue can function both as a Python module and in command l... | {"/deflacue/cli.py": ["/deflacue/deflacue.py"], "/deflacue/parser.py": ["/deflacue/exceptions.py"], "/tests/test_basic.py": ["/deflacue/deflacue.py", "/deflacue/exceptions.py"], "/deflacue/deflacue.py": ["/deflacue/exceptions.py", "/deflacue/parser.py"]} |
16,639 | saibunny/fil-shortstory-svm-thesis | refs/heads/master | /stopwords.py | import csv
def loadTagset(filename):
loaded = []
tagset = []
with open(filename) as csvfile:
lines = csv.reader(csvfile)
loaded = list(lines)
for tag in loaded:
tagset.append(tag[0])
return tagset
tagset = loadTagset("data\\tags.csv")
if "LM" in tagset:
print("yes")
| {"/preprocess.py": ["/py4jTest.py", "/yandextranslatetest.py", "/senticnettest.py"]} |
16,640 | saibunny/fil-shortstory-svm-thesis | refs/heads/master | /py4jTest.py | from py4j.java_gateway import JavaGateway
# gateway = JavaGateway()
#
# tagger = gateway.entry_point.getPost()
#
#
# sentence = "high school. taga-punch, mag-shopping, pala-iyot pala iyot taga-bake taga bake nag i strike nag-i-strike"
# print(tagger.tagPOS(sentence))
class POSTagger:
def __init__(self):
... | {"/preprocess.py": ["/py4jTest.py", "/yandextranslatetest.py", "/senticnettest.py"]} |
16,641 | saibunny/fil-shortstory-svm-thesis | refs/heads/master | /spacytest.py | from spacy.lang.en import English
nlp = English()
samplesent = ["couldn't", "eating", "killed", "loving", "parties"]
for word in samplesent:
doc = nlp(word)
word = doc[0].lemma_
print(word)
| {"/preprocess.py": ["/py4jTest.py", "/yandextranslatetest.py", "/senticnettest.py"]} |
16,642 | saibunny/fil-shortstory-svm-thesis | refs/heads/master | /yandextranslatetest.py | import json, urllib.request
# key = "trnsl.1.1.20180821T035101Z.7622bc974ead6403.f3016199d1f56c33e68de316b816750e09daae43"
#
#
# def toUrlSafe(sentence):
# return sentence.replace(" ", "+")
#
# def translateSentence(sentence):
# sentence = toUrlSafe(sentence)
# with urllib.request.urlopen("https://translat... | {"/preprocess.py": ["/py4jTest.py", "/yandextranslatetest.py", "/senticnettest.py"]} |
16,643 | saibunny/fil-shortstory-svm-thesis | refs/heads/master | /consolidate.py | import csv
def loadDataset(filename):
with open(filename) as csvfile:
lines = csv.reader(csvfile)
return list(lines)
counti = 0
for i in range(6):
consolidated = []
counti = i + 1
for j in range(37):
countj = j+1
inputdirectory = "data\\validset_batch" + str(countj... | {"/preprocess.py": ["/py4jTest.py", "/yandextranslatetest.py", "/senticnettest.py"]} |
16,644 | saibunny/fil-shortstory-svm-thesis | refs/heads/master | /senticnettest.py | from senticnet.senticnet import SenticNet
##NOTE TO SELF YOU STILL HAVE TO FIX THE EXCEPTION HERE
class SenticValuer:
def getSentics(self, word):
senticsAndItensity = []
sn = SenticNet('en')
try:
sentics = sn.sentics(word)
polarity_intensity = sn.polarity_intense(wor... | {"/preprocess.py": ["/py4jTest.py", "/yandextranslatetest.py", "/senticnettest.py"]} |
16,645 | saibunny/fil-shortstory-svm-thesis | refs/heads/master | /preprocess.py | #import for csv
import csv
#import for tagger
from py4jTest import POSTagger
#import for translator
from yandextranslatetest import Translator
#import for sentic value tagger
from senticnettest import SenticValuer
#import for english lemmatizer
from spacy.lang.en import English
#import for sorting
from operator im... | {"/preprocess.py": ["/py4jTest.py", "/yandextranslatetest.py", "/senticnettest.py"]} |
16,655 | jnothman/pickleback | refs/heads/master | /test_pickleback.py | import pickle
import subprocess
def test_with_script(tmpdir):
tmpdir.join('plot.py').write('import sys\n'
'import matplotlib.pyplot as plt\n'
'import matplotlib\n'
'matplotlib.use("Agg")\n'
... | {"/pickleback/__main__.py": ["/pickleback/__init__.py"]} |
16,656 | jnothman/pickleback | refs/heads/master | /pickleback/backend_pkl.py | from __future__ import (absolute_import, division, print_function,
unicode_literals)
import pickle
from matplotlib.backend_bases import FigureManagerBase, FigureCanvasBase
from matplotlib.figure import Figure
########################################################################
#
# The fo... | {"/pickleback/__main__.py": ["/pickleback/__init__.py"]} |
16,657 | jnothman/pickleback | refs/heads/master | /pickleback/__main__.py | from __future__ import print_function
import sys
import runpy
from pickleback import register
def main():
if len(sys.argv) == 1:
print('Usage: {prog} /path/to/python-script.py [script-args...]\n'
'Usage: {prog} -m path.to.module [script-args...]\n'
'\n'
'Loads ma... | {"/pickleback/__main__.py": ["/pickleback/__init__.py"]} |
16,658 | jnothman/pickleback | refs/heads/master | /pickleback/__init__.py | def register():
from matplotlib.backend_bases import register_backend
for ext in ['pkl', 'pickle']:
register_backend(ext, 'pickleback.backend_pkl',
'Python pickle format, to be used with caution on a '
'single matplotlib version')
| {"/pickleback/__main__.py": ["/pickleback/__init__.py"]} |
16,662 | ddalton002/ddalton002stuff | refs/heads/master | /CSCI465v5old/firstapp/migrations/0006_suggestion_choice_field.py | # -*- coding: utf-8 -*-
# Generated by Django 1.11.5 on 2017-12-04 08:41
from __future__ import unicode_literals
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('firstapp', '0005_remove_suggestion_choice_field'),
]
operations = [
... | {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,663 | ddalton002/ddalton002stuff | refs/heads/master | /CSCI465v5/firstapp/models.py | from django.db import models
from django import forms
from django.contrib.auth.models import User
from django.db.models.signals import post_save
from django.dispatch import receiver
# Create your models here.
CHOICES = (('LFG', 'Lfg',), ('LFM', 'Lfm',),('WTB', 'Wtb',), ('WTS', 'Wts',))
class suggestion(models.... | {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,664 | ddalton002/ddalton002stuff | refs/heads/master | /CSCI465v3/firstapp/views.py | from django.shortcuts import render, redirect
from django.contrib.auth.models import User
from django.http import HttpResponse, JsonResponse
from .models import *
from .forms import *
from django.contrib.auth.decorators import login_required
from django.db import transaction
from django.contrib.postgres.search i... | {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,665 | ddalton002/ddalton002stuff | refs/heads/master | /CSCI465/firstapp/views.py | from django.shortcuts import render, redirect
from django.contrib.auth.models import User
from django.http import HttpResponse, JsonResponse
from .models import *
from .forms import *
from django.contrib.auth.decorators import login_required
from django.db import transaction
# from django.contrib.auth.forms im... | {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,666 | ddalton002/ddalton002stuff | refs/heads/master | /CSCI465v5old/firstapp/forms.py | from django import forms
from django.core.validators import validate_unicode_slug
from firstapp.models import CHOICES
from django.contrib.auth.forms import UserCreationForm, AuthenticationForm
from django.contrib.auth.models import User
from .models import *
class suggestion_form(forms.Form):
suggestion = ... | {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,667 | ddalton002/ddalton002stuff | refs/heads/master | /CSCI465/firstapp/forms.py | from django import forms
from django.core.validators import validate_unicode_slug
from django.contrib.auth.forms import UserCreationForm, AuthenticationForm
from django.contrib.auth.models import User
from .models import *
class suggestion_form(forms.Form):
suggestion = forms.CharField(label='Suggestion',... | {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,668 | ddalton002/ddalton002stuff | refs/heads/master | /CSCI465v5/firstapp/migrations/0005_remove_suggestion_choice_field.py | # -*- coding: utf-8 -*-
# Generated by Django 1.11.5 on 2017-12-04 08:37
from __future__ import unicode_literals
from django.db import migrations
class Migration(migrations.Migration):
dependencies = [
('firstapp', '0004_auto_20171204_0035'),
]
operations = [
migrations.Re... | {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,669 | ddalton002/ddalton002stuff | refs/heads/master | /CSCI465v5/firstapp/urls.py | from django.conf.urls import url
from . import views
urlpatterns = [
url(r'^$',views.index, name='index'),
url(r'page2$',views.page2, name='page2'),
url(r'register/$',views.register, name='register'),
url(r'suggestions/$',views.suggestions, name='suggestions'),
url(r'^suggest/$',views.sug... | {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,670 | ddalton002/ddalton002stuff | refs/heads/master | /CSCI465v5old/firstapp/migrations/0007_remove_suggestion_choice_field.py | # -*- coding: utf-8 -*-
# Generated by Django 1.11.5 on 2017-12-04 08:46
from __future__ import unicode_literals
from django.db import migrations
class Migration(migrations.Migration):
dependencies = [
('firstapp', '0006_suggestion_choice_field'),
]
operations = [
migratio... | {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,671 | ddalton002/ddalton002stuff | refs/heads/master | /venv/bin/django-admin.py | #!/home/ddalton86/ddalton002stuff/venv/bin/python3
from django.core import management
if __name__ == "__main__":
management.execute_from_command_line()
| {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,672 | ddalton002/ddalton002stuff | refs/heads/master | /CSCI465/firstapp/migrations/0003_auto_20171114_1718.py | # -*- coding: utf-8 -*-
# Generated by Django 1.11.5 on 2017-11-15 01:18
from __future__ import unicode_literals
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('firstapp', '0002_auto_20171114_1056'),
]
operations = [
migra... | {"/CSCI465/firstapp/views.py": ["/CSCI465/firstapp/forms.py"]} |
16,673 | zackhy/statistical-machine-learning | refs/heads/master | /models/helper.py | # -*- coding: utf-8 -*-
import numpy as np
def sigmoid(n):
return 1 / (1 + np.exp(-n))
def log_loss(probs, y_true):
probs = np.array(probs)
y_true = np.array(y_true)
term_1 = np.dot(y_true, np.log(probs))
term_2 = np.dot(1 - y_true, np.log(1 - probs))
return - (1 / len(y_true)) * (term_1 +... | {"/test.py": ["/models/naive_bayes.py"], "/models/naive_bayes.py": ["/models/base.py", "/models/utils.py"], "/models/base.py": ["/models/utils.py"], "/models/logistic_regression.py": ["/models/base.py", "/models/helper.py", "/models/utils.py"]} |
16,674 | zackhy/statistical-machine-learning | refs/heads/master | /test.py | import numpy as np
from models.naive_bayes import BernoulliNB as MyBNB
from models.naive_bayes import MultinomialNB as MyMNB
from sklearn.naive_bayes import BernoulliNB
from sklearn.naive_bayes import MultinomialNB
X = np.random.randint(5, size=(6, 100))
y = np.array([1, 2, 3, 4, 4, 5])
my_clf = MyBNB().fit(X, y)
my_... | {"/test.py": ["/models/naive_bayes.py"], "/models/naive_bayes.py": ["/models/base.py", "/models/utils.py"], "/models/base.py": ["/models/utils.py"], "/models/logistic_regression.py": ["/models/base.py", "/models/helper.py", "/models/utils.py"]} |
16,675 | zackhy/statistical-machine-learning | refs/heads/master | /models/naive_bayes.py | # -*- coding: utf-8 -*-
import numpy as np
from models.base import Base
from models.utils import input_check, target_check, fitted_check
class BernoulliNB(Base):
"""Bernoulli Naive Bayes Classifier that implements the fit(X, y) and predict(T) methods"""
def fit(self, X, y):
"""
Fit the Bernou... | {"/test.py": ["/models/naive_bayes.py"], "/models/naive_bayes.py": ["/models/base.py", "/models/utils.py"], "/models/base.py": ["/models/utils.py"], "/models/logistic_regression.py": ["/models/base.py", "/models/helper.py", "/models/utils.py"]} |
16,676 | zackhy/statistical-machine-learning | refs/heads/master | /models/base.py | # -*- coding: utf-8 -*-
import numpy as np
from models.utils import input_check, target_check, fitted_check
class Base(object):
def __int__(self):
pass
def fit(self, X, y):
return NotImplementedError
def predict(self, T):
return NotImplementedError
@fitted_check
def scor... | {"/test.py": ["/models/naive_bayes.py"], "/models/naive_bayes.py": ["/models/base.py", "/models/utils.py"], "/models/base.py": ["/models/utils.py"], "/models/logistic_regression.py": ["/models/base.py", "/models/helper.py", "/models/utils.py"]} |
16,677 | zackhy/statistical-machine-learning | refs/heads/master | /models/logistic_regression.py | # -*- coding: utf-8 -*-
import numpy as np
from models.base import Base
from models.helper import sigmoid, log_loss
from models.utils import input_check, target_check, fitted_check
class LogisticRegression(Base):
"""Implement a simple logistic regression"""
def __init__(self, learning_rate, max_iter):
... | {"/test.py": ["/models/naive_bayes.py"], "/models/naive_bayes.py": ["/models/base.py", "/models/utils.py"], "/models/base.py": ["/models/utils.py"], "/models/logistic_regression.py": ["/models/base.py", "/models/helper.py", "/models/utils.py"]} |
16,678 | zackhy/statistical-machine-learning | refs/heads/master | /models/utils.py | # -*- coding: utf-8 -*-
import numpy as np
def fitted_check(func):
def wrapper(self, *args, **kw):
if not hasattr(self, 'fitted'):
raise AttributeError("This model instance is not fitted yet. Call 'fit' first.")
return func(self, *args, **kw)
return wrapper
def input_check(X):
... | {"/test.py": ["/models/naive_bayes.py"], "/models/naive_bayes.py": ["/models/base.py", "/models/utils.py"], "/models/base.py": ["/models/utils.py"], "/models/logistic_regression.py": ["/models/base.py", "/models/helper.py", "/models/utils.py"]} |
16,679 | zackhy/statistical-machine-learning | refs/heads/master | /models/metrics.py | # -*- coding: utf-8 -*-
import numpy as np
def confusion_matrix(y_true, y_pred):
"""
:param y_true: True targets. An array-like object. Shape = (n_samples, )
:param y_pred: Predicted values. An array-like object. Shape = (n_samples, )
:return: Consufison matrix.
"""
y_true = np.array(y_true)
... | {"/test.py": ["/models/naive_bayes.py"], "/models/naive_bayes.py": ["/models/base.py", "/models/utils.py"], "/models/base.py": ["/models/utils.py"], "/models/logistic_regression.py": ["/models/base.py", "/models/helper.py", "/models/utils.py"]} |
16,685 | aman229/vqa_tensorflow | refs/heads/master | /VQA.py | from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from tensorflow.python.framework import random_seed
from collections import Counter
from PIL import Image
import numpy as np
import itertools
import zipfile
import urllib
import json
import os
import re
class ... | {"/main.py": ["/model.py"], "/model.py": ["/VQA.py"]} |
16,686 | aman229/vqa_tensorflow | refs/heads/master | /main.py | from model import Model
import argparse
parser = argparse.ArgumentParser(description='')
parser.add_argument('--epoch', dest='epoch', type=int, default=20, help='# of epoch')
parser.add_argument('--batch_size', dest='batch_size', type=int, default=128, help='# images in batch')
parser.add_argument('--lr', dest='lr', t... | {"/main.py": ["/model.py"], "/model.py": ["/VQA.py"]} |
16,687 | aman229/vqa_tensorflow | refs/heads/master | /model.py | from resnet_utils import resnet_arg_scope
from resnet import resnet_v2_152
from VQA import VQADataSet
import tensorflow as tf
import time
import os
# TODO add summaries
# TODO add validation
class Model(object):
"""
TF implementation of "Show, Ask, Attend, and Answer: A Strong Baseline For Visual Question... | {"/main.py": ["/model.py"], "/model.py": ["/VQA.py"]} |
16,707 | davidengebretson/md2html | refs/heads/master | /setup.py | import ez_setup
ez_setup.use_setuptools()
from setuptools import setup
from md2html import __VERSION__
setup(name='md2html',
author='Gary Campbell',
author_email='campg2003@gmail.com',
version=__VERSION__,
install_requires = ['markdown'],
py_modules=['md2html'],
entry_points = {'console_scripts': ['m... | {"/setup.py": ["/md2html.py"], "/setupexe.py": ["/md2html.py"]} |
16,708 | davidengebretson/md2html | refs/heads/master | /setupexe.py | from distutils.core import setup
import py2exe
from md2html import __VERSION__
setup(name='md2html',
version=__VERSION__,
author='Gary Campbell',
author_email='campg2003@gmail.com',
description='Convert Markdown to HTML',
requires=['markdown(>=2.6.6)'],
console=['md2html.py'],
options={"py2exe":... | {"/setup.py": ["/md2html.py"], "/setupexe.py": ["/md2html.py"]} |
16,709 | davidengebretson/md2html | refs/heads/master | /md2html.py | # 5/23/16 md2html-- convert Markdown to HTML-- for the Audacity JAWS Script project.
__VERSION__ = "1.0.7"
import sys
import os
import os.path
import argparse
import re
import io
import ConfigParser
import markdown
import markdown.extensions
# for py2exe
import markdown.extensions.fenced_code
from markdown.extensions.f... | {"/setup.py": ["/md2html.py"], "/setupexe.py": ["/md2html.py"]} |
16,740 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/stores/base.py | import datetime
class BaseStoreModel:
def __init__(self):
self._data_dict = {}
class BaseProperties:
CreatedAt = 'created_at'
UpdatedAt = 'updated_at'
_reverseMapping = {}
class PropertyNames:
pass
class ReverseMapping:
pass
@property
def datadict... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,741 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/models/Product.py | from tornado.gen import *
from api.core.product import ProductHelper
from api.stores.product import Product
from api.models.base import BaseModel
class ProductModel(BaseModel):
def __init__(self, **kwargs):
super().__init__(**kwargs)
self._ph = ProductHelper(**kwargs)
@coroutine
def creat... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,742 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/models/group.py | from api.stores.group import *
from api.stores.user import User, GroupMapping, UserStatus, LinkedAccount, LinkedAccountType
from api.stores.employee import Employee, SupportedRoles, GroupStatus
from tornado.gen import *
from api.core.user import UserHelper
from api.models.base import BaseModel
from api.core.group impor... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,743 | shanmuk184/SalesCrmbackend | refs/heads/master | /app.py | import tornado.ioloop
import tornado.web
from urls import urlpatterns
from db.db import Database
from config.config import Settings
from tornado_swirl.swagger import Application, describe
from tornado_swirl import api_routes
from tornado.options import define, options
settings = Settings()
describe(title='UMS API', d... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,744 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/models/base.py | from api.core.user import UserHelper
from api.core.group import GroupHelper
from tornado.gen import coroutine, Return
import bcrypt
class BaseModel(object):
def __init__(self, **kwargs):
if not kwargs.get('db'):
raise ValueError('db should be present')
self._user = None
if kwarg... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,745 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/stores/product.py | from api.stores.base import BaseStoreModel
from bson import ObjectId
class Product(BaseStoreModel):
class PropertyNames:
Name = 'name'
ProductCode = 'pc'
Type = 'type'
SaleScheme = 'ss'
PurchaseScheme = 'ps'
CostPrice = 'cp'
MRP = 'mrp'
Id = '_id'
... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,746 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/stores/group.py | from .base import BaseStoreModel
from enum import Enum
from api.stores.product import Product
from bson import ObjectId
from datetime import datetime
import uuid
class CreateEmployeeRequestParams:
Name = 'name'
Designation='designation'
Password = 'password'
EmailId = 'email_id'
Phone = 'phone'
... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,747 | shanmuk184/SalesCrmbackend | refs/heads/master | /tests/test_user_store.py | from api.stores.user import User
from tornado.testing import AsyncHTTPTestCase
from app import MyApplication
from tornado.testing import AsyncHTTPClient
from tornado.httputil import HTTPServerRequest
class TestServiceApp(AsyncHTTPTestCase):
def get_app(self):
application = MyApplication()
return a... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,748 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/handlers/group.py | from tornado.gen import *
from .baseHandler import BaseHandler, BaseApiHandler
from api.models.group import GroupModel
import json
from tornado import web
from bson.json_util import dumps
from tornado_swirl.swagger import schema, restapi
@restapi('/api/user/groups')
class GroupsListHandler(BaseApiHandler):
@web.aut... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,749 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/models/event.py | from tornado.gen import *
from api.core.event import EventHelper
from api.models.base import BaseModel
class EventModel(BaseModel):
def __init__(self, **kwargs):
super().__init__(**kwargs)
self._eh = EventHelper(**kwargs)
@coroutine
def create_event(self, eventDict):
if not even... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,750 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/models/user.py | from tornado.gen import *
import bcrypt
import jwt
import base64
from api.stores.user import User, LinkedAccount, LinkedAccountType, RegisterRequestParams, UserStatus, EmailValidationStatus, NewUserStatus
from api.stores.group import Group, CreateEmployeeRequestParams
from api.models.base import BaseModel
import tornad... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,751 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/stores/user.py | from enum import Enum
from .base import BaseStoreModel
import re
from bson import ObjectId
import uuid
import datetime
from tornado_swirl.swagger import schema
class SupportedRoles:
Admin = 'ad'
Member = 'me'
class DisplayRoles:
Employee = 'Employee'
Owner = 'Owner'
class UserStatus:
Invited = 'in... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,752 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/handlers/user.py | from tornado import web
from tornado.gen import *
from .baseHandler import BaseHandler, BaseApiHandler
import simplejson as json
from api.models.user import UserModel
from bson.json_util import dumps
from tornado_swirl.swagger import schema, restapi
@restapi('/api/register')
class RegisterHandler(BaseHandler):
@c... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,753 | shanmuk184/SalesCrmbackend | refs/heads/master | /urls.py | from api.handlers.user import *
from api.handlers.group import GroupsListHandler, GroupHandler, CreateEmloyeeHandler
from api.handlers.product import ProductHandler
from api.handlers.event import EventHandler
urlpatterns = [
# Admin register handler
(r"/api/register$", RegisterHandler),
(r"/api/login$",Lo... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,754 | shanmuk184/SalesCrmbackend | refs/heads/master | /api/core/group.py | from tornado.gen import *
from api.stores.group import Group, MemberMapping
from api.stores.user import SupportedRoles, StatusType
from db.db import QueryConstants
from db.db import Database
class GroupHelper:
def __init__(self,**kwargs):
self._user = kwargs.get('user')
database = Database(kwargs.g... | {"/api/models/Product.py": ["/api/stores/product.py", "/api/models/base.py"], "/api/models/group.py": ["/api/stores/group.py", "/api/stores/user.py", "/api/models/base.py", "/api/core/group.py"], "/app.py": ["/urls.py"], "/api/models/base.py": ["/api/core/group.py"], "/api/stores/product.py": ["/api/stores/base.py"], "... |
16,758 | NuevoIngenioMexicano/DevPlaces | refs/heads/master | /myApp/models.py | from __future__ import unicode_literals
from django.db import models
# Create your models here.
class Categorias(models.Model):
#Atributos
nombre = models.CharField(max_length=25)
descripcion = models.CharField(max_length=140)
def __str__(self):
return self.nombre
class Publicacion(models.Model):
#Conexiones... | {"/myApp/forms.py": ["/myApp/models.py"], "/myApp/views.py": ["/myApp/forms.py"]} |
16,759 | NuevoIngenioMexicano/DevPlaces | refs/heads/master | /myApp/forms.py | from __future__ import unicode_literals
from django.forms import ModelForm
from . import models
from django.utils.translation import ugettext_lazy as _
from django import forms
from .models import Publicacion
class Crear(ModelForm):
class Meta:
model = models.Publicacion
fields = ['lugar','descripcion','categ... | {"/myApp/forms.py": ["/myApp/models.py"], "/myApp/views.py": ["/myApp/forms.py"]} |
16,760 | NuevoIngenioMexicano/DevPlaces | refs/heads/master | /myApp/migrations/0001_initial.py | # -*- coding: utf-8 -*-
# Generated by Django 1.9.8 on 2016-07-24 12:47
from __future__ import unicode_literals
from django.db import migrations, models
import django.db.models.deletion
class Migration(migrations.Migration):
initial = True
dependencies = [
]
operations = [
migrations.Creat... | {"/myApp/forms.py": ["/myApp/models.py"], "/myApp/views.py": ["/myApp/forms.py"]} |
16,761 | NuevoIngenioMexicano/DevPlaces | refs/heads/master | /myApp/views.py | from django.shortcuts import render
from . import models
from django.views.generic import View
from django.views.decorators.csrf import csrf_exempt
from .forms import Crear
#Create your views here.
def crear(request):
template_name = 'index2.html'
todo = models.Publicacion.objects.all()
context = {
'todo':todo ... | {"/myApp/forms.py": ["/myApp/models.py"], "/myApp/views.py": ["/myApp/forms.py"]} |
16,762 | red23495/random_util | refs/heads/master | /Python/Algebra/test/test_binary_exponentiation.py | import unittest
from ..binary_exponentiation import mod_pow
class BinaryExponentiationTest(unittest.TestCase):
def test_calculates_power_properly(self):
self.assertEqual(mod_pow(2, 2), 4)
self.assertEqual(mod_pow(1, 10), 1)
self.assertEqual(mod_pow(10, 5), 100000)
def test_calcul... | {"/Python/Algebra/test/test_binary_exponentiation.py": ["/Python/Algebra/binary_exponentiation.py"]} |
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