Dataset card: IDs section links to docs/data.md in the code repo
#7
by titodamiani - opened
README.md
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```
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## IDs
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- `proteomes_all.csv`: 4 columns per orthogroup tool, with the prefix `sonicpd_` (SonicParanoid) or `orthofinder_` (OrthoFinder): `_id`, `_size` (genes), `_sp_in_grp` (species), `_intersp` (species joined with `;`).
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- A singleton transcript is its own orthogroup, with a negative ID (-1, -2, ...). `sonicpd_id` starts at 1. `orthofinder_id` is the number in the OrthoFinder ID (`OG0000123` is 123), so it starts at 0.
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`scripts/README.md` in the [code repository](https://github.com/titodamiani/PiperNET) describes how each file is made.
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```
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## IDs
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Column and ID conventions: [docs/data.md](https://github.com/titodamiani/PiperNET/blob/master/docs/data.md).
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`scripts/README.md` in the [code repository](https://github.com/titodamiani/PiperNET) describes how each file is made.
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