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afdb6

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afdb6 / experiments

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History: 45 commits

tonynzh2

Proposed backbone-leading modality schedules and teacher-clock simulation; no training change

3509b2a verified about 21 hours ago

alignment_joint_overfit_20261003
Add frozen alignment and rigid-ligand overfit comparison inputs 4 days ago
annotation_filters_20261001
Mark reference-mask dependent results for recomputation 6 days ago
backbone_first_schedule_20261006
Proposed backbone-leading modality schedules and teacher-clock simulation; no training change about 21 hours ago
binding_filters_20261001
Publish native-sequence UniProt binding-label benchmark and reusable inputs 6 days ago
biolip_binding_comparison_20261001
Explain partial feature overlap, real matching examples and M-CSA scope 6 days ago
combined_local_sc_20261006
Add modality and training schedule figures with numerical curves about 24 hours ago
combined_refinement_20261006
Combined localized robust SC bridge: frozen inputs, process checks, two controlled Delta arms about 23 hours ago
delta_alignment_eval64_20261004
Record corrected seven-job evaluation publication receipts 3 days ago
edm2_weighting_20261006
EDM2-weighted fully loaded bridge: frozen code, inputs, objective checks and matched Delta arm about 21 hours ago
filter_review_20261002
Record final filter review publication 5 days ago
foldseek_alignment_20261003
Publish controlled 3Di versus TM-align comparison and prepared reproducible inputs 4 days ago
interpro_api_coverage_20261001
Back up measured InterPro API coverage, sampled inputs and cached responses 6 days ago
interpro_binding_scan_20261001
Clarify reference-feature OR selection; FAPM remains diagnostic 6 days ago
local_edit_path_20261005
Back up controlled localized residue-path trials and portable public inputs 3 days ago
pair_distance_path_20261004
Add matched pairwise-distance bridge experiment and offline verification 4 days ago
pocket_filters_20261001
Publish motif plus pocket geometry benchmark, corrected mappings and portable inputs 6 days ago
rigid_ligand_bridge_20261002
Add ligand lookup runtime diagnosis, equivalence checks and deployed speedup 5 days ago
sb_gpu_pilot_20261004
Record completed SB pilot publication and verified source archive receipts 4 days ago
sb_motion_lift_review_20261004
Record completed SB motion-lift review publication receipts 3 days ago
sb_motion_pilot_20261004
Record completed SB2 Git HF and checkpoint backup receipts 3 days ago
sb_real_complex_and_codesign_20261004
Recorded79853 EMA sampling GIF with sequence and time 3 days ago
sb_reference_validation_20261004
Validate restricted all-atom SB reference and publish posterior audit 4 days ago
sb_runs_report_20261004
Report two SB implementations and frozen checkpoint results 3 days ago
self_condition_staged_20261006
Back up self-conditioning and staged side-chain prototype with frozen inputs 1 day ago
sequence_profile_filters_20261001
Mark reference-mask dependent results for recomputation 6 days ago
smooth_sidechain_20261006
Smooth ordered delayed-sidechain clocks: exact process, checks and controlled Delta experiment 1 day ago