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GenomeFlow: Genomic Sequence Analysis Pipeline 📑 Paper | 🌐 Project Page | 💾 Released Resources | 📦 Repo This is the processed dataset from our GenomeFlow pipeline. Please also check the raw sequence data: toolevalxm/GenomeFlow-Seq-Raw. Dataset | Dataset | Link | |-|-| |GenomeFlow-Seq-Processed|🤗| Processing Pipeline Step Tool Version Alignment BWA-MEM2 2.2.1 Variant Calling GATK HaplotypeCaller 4.4.0 Annotation VEP 110 Introduction The GenomeFlow pipeline processes raw genomic sequences through a standardized workflow including alignment, variant calling, and functional annotation. We utilize BWA-MEM2 for efficient sequence alignment against the GRCh38 reference genome. *Due to data sharing agreements, we only release a subset of the full processed dataset on this page.
License
The license for this dataset is MIT.
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