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334681d d5f529f 334681d d5f529f 334681d | 1 2 3 4 5 | # GenomeFlow: Genomic Sequence Analysis Pipeline 📑 Paper | 🌐 Project Page | 💾 Released Resources | 📦 Repo This is the processed dataset from our GenomeFlow pipeline. Please also check the raw sequence data: [toolevalxm/GenomeFlow-Seq-Raw](https://huggingface.co/datasets/toolevalxm/GenomeFlow-Seq-Raw). **Dataset** | Dataset | Link | |-|-| |GenomeFlow-Seq-Processed|[🤗](https://huggingface.co/datasets/toolevalxm/GenomeFlow-Seq-Processed)| **Processing Pipeline** Step Tool Version Alignment BWA-MEM2 2.2.1 Variant Calling GATK HaplotypeCaller 4.4.0 Annotation VEP 110 **Introduction** The GenomeFlow pipeline processes raw genomic sequences through a standardized workflow including alignment, variant calling, and functional annotation. We utilize BWA-MEM2 for efficient sequence alignment against the GRCh38 reference genome. *Due to data sharing agreements, we only release a subset of the full processed dataset on this page.
**License**
The license for this dataset is MIT. |