repo_name
stringlengths
6
130
hexsha
list
file_path
list
code
list
apis
list
lunayach/texar-pytorch
[ "ac3e334e491f524dd01654b07af030fa20c88b34", "ac3e334e491f524dd01654b07af030fa20c88b34", "ac3e334e491f524dd01654b07af030fa20c88b34" ]
[ "texar/core/optimization_test.py", "texar/modules/decoders/transformer_decoders.py", "texar/core/attention_mechanism_test.py" ]
[ "\"\"\"\nUnit tests for various optimization related utilities.\n\"\"\"\n\nimport unittest\n\nimport torch\n\nfrom texar.core.optimization import *\n\n\nclass OptimizationTest(unittest.TestCase):\n r\"\"\"Test optimization.\n \"\"\"\n\n def setUp(self):\n N, D_in, H, D_out = 64, 100, 10, 1\n\n ...
[ [ "torch.nn.Linear", "torch.nn.MSELoss", "torch.nn.ReLU", "torch.tensor", "torch.randn" ], [ "torch.zeros", "torch.nn.Dropout", "torch.nn.LayerNorm", "torch.nn.ModuleList", "torch.ones_like", "torch.empty", "torch.argmax", "torch.where" ], [ "torch.Siz...
GeoscienceAustralia/anuga_core
[ "372e21a5c1c88867437374c851f1ff629bd3dab3" ]
[ "anuga/parallel/tests/test_parallel_sw_flow_low_froude_0.py" ]
[ "\"\"\"\nSimple water flow example using ANUGA\n\nWater driven up a linear slope and time varying boundary,\nsimilar to a beach environment\n\nThis is a very simple test of the parallel algorithm using the simplified parallel API\n\"\"\"\nfrom __future__ import print_function\nfrom __future__ import division\n\n\n#...
[ [ "numpy.allclose", "numpy.array" ] ]
jkortner/ml-ops
[ "c0b6d4ce76008a325cfb49e87f2be40a22b62b3e" ]
[ "sandbox/ml/train.py" ]
[ "import mlflow\nimport mlflow.sklearn\nfrom sklearn.model_selection import train_test_split\nfrom sklearn.naive_bayes import BernoulliNB\nfrom sklearn.metrics import accuracy_score\nimport pandas as pd\n\n\ndef get_X_y(df, target):\n\n # sklearn split\n train, test = train_test_split(df)\n\n # X, y split\n...
[ [ "sklearn.model_selection.train_test_split", "pandas.read_csv", "sklearn.naive_bayes.BernoulliNB", "sklearn.metrics.accuracy_score" ] ]
fossabot/autofocus
[ "45954416011eca7c3f25a548bfe5017a083d7593" ]
[ "autofocus/predict/example_post.py" ]
[ "# Examples of how to make requests agains the image classification endpoints\n# Note:\n# 1. This assumes that the image_classifier_api is running (i.e., using docker compose up)\n# 2. It also assumes that the api address is at 127.0.0.1 (which should be the case)\nimport os\n\nimport pandas as pd\nimport reque...
[ [ "pandas.DataFrame" ] ]
nirvaank/pyqmc
[ "a92c926d1008e466409cdefaab74d343061a30b4" ]
[ "tests/integration/test_twist.py" ]
[ "import numpy as np\nimport pyqmc.api as pyq\nfrom pyqmc.slater import Slater\nfrom pyqmc.pbc import enforce_pbc\nfrom pyqmc.coord import PeriodicConfigs\n\n\ndef test_cubic_with_ecp(li_cubic_ccecp, kind=1):\n cell, mf = li_cubic_ccecp\n runtest(cell, mf, kind=kind)\n\n\ndef test_noncubic(diamond_primitive, k...
[ [ "numpy.linalg.norm", "numpy.random.seed", "numpy.round", "numpy.einsum", "numpy.random.randint", "numpy.abs" ] ]
PASTAplus/dex
[ "d04fcf756b77856f4be0585dd7f5d38795751247", "d04fcf756b77856f4be0585dd7f5d38795751247" ]
[ "tools/prepopulate_caches.py", "dex/util.py" ]
[ "#!/usr/bin/env python\n\n\"\"\"Prepopulate caches\"\"\"\nimport collections\nimport contextlib\nimport csv\nimport logging\nimport os\nimport pathlib\nimport sys\nimport time\nimport unittest.mock\n\nimport pandas as pd\nimport pandas_profiling.model.base\n\nimport pandas_profiling.model.describe\n\n# WALK_ROOT_PA...
[ [ "pandas.read_csv" ], [ "pandas.option_context" ] ]
axiezai/complex_laplacian
[ "e84574a7d9c051a95b5d37aa398765aeb5f85fa4" ]
[ "scripts/laplacian_pearson_basinhopping.py" ]
[ "\"\"\"\nUse the basinhopping algorithm to find best alpha, speed, and frequency\nthat produces the best spatial correlation for a given canonical network\n\"\"\"\n\n# number stuff imports\nimport h5py\nimport numpy as np\nimport pandas as pd\nfrom scipy.optimize import basinhopping\nfrom scipy.stats import pearson...
[ [ "numpy.max", "numpy.array", "numpy.nan_to_num", "numpy.zeros", "numpy.round", "pandas.DataFrame", "numpy.load", "numpy.min", "numpy.where", "numpy.argsort", "numpy.all", "pandas.read_csv", "numpy.squeeze" ] ]
jerryuhoo/PaddleSpeech
[ "1eec7b5e042da294c7524af92f0fae4c32a71aa3", "1eec7b5e042da294c7524af92f0fae4c32a71aa3" ]
[ "paddlespeech/server/engine/tts/online/onnx/tts_engine.py", "audio/tests/features/test_log_melspectrogram.py" ]
[ "# Copyright (c) 2021 PaddlePaddle Authors. All Rights Reserved.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless re...
[ [ "numpy.concatenate", "numpy.load", "numpy.transpose" ], [ "numpy.testing.assert_array_almost_equal" ] ]
spalato/spectro_tools
[ "977dc35dfec35ffbc75cacecdeeda9ed4fdbf0cd" ]
[ "scratch/vibronic.py" ]
[ "import numpy as np\nfrom scipy.special import assoc_laguerre, factorial\nfrom lmfit.lineshapes import voigt\nimport matplotlib.pyplot as plt\n\n# Normally, all these functions are in a module called `spectro.utils`. \n# I would only perform the following import:\n# from spectro.utils import vibronic_emission\n\n\n...
[ [ "numpy.zeros_like", "numpy.asarray", "matplotlib.pyplot.savefig", "numpy.sum", "matplotlib.pyplot.plot", "matplotlib.pyplot.legend", "numpy.exp", "matplotlib.pyplot.figure", "numpy.where", "numpy.arange", "scipy.special.factorial", "numpy.abs", "numpy.all", ...
Nickfagiano/SLM-Lab
[ "dddff5e1ce7454c33b45a803dd0c1d8e133c4508", "dddff5e1ce7454c33b45a803dd0c1d8e133c4508" ]
[ "slm_lab/agent/net/net_util.py", "test/conftest.py" ]
[ "from functools import partial, wraps\nfrom slm_lab.lib import logger, optimizer, util\nimport os\nimport pydash as ps\nimport torch\nimport torch.nn as nn\n\nlogger = logger.get_logger(__name__)\n\n# register custom torch.optim\nsetattr(torch.optim, 'GlobalAdam', optimizer.GlobalAdam)\nsetattr(torch.optim, 'Global...
[ [ "torch.nn.Linear", "torch.isnan", "torch.nn.init.constant_", "torch.nn.Sequential", "torch.is_tensor", "torch.cuda.is_available", "torch.nn.init.calculate_gain", "torch.equal" ], [ "pandas.DataFrame", "numpy.asarray" ] ]
yoyonel/DailyCodingProblem
[ "5fb1e844fa975ebc0bd0e2818ea20ed5696170fa" ]
[ "src/coding_interview_preparation/backtracking_algorithm_n_queens/app.py" ]
[ "\"\"\"\n\n\"\"\"\nfrom functools import partial\nfrom itertools import permutations\nfrom matplotlib import pyplot\nimport time\nimport timeit\nfrom typing import Iterator, Tuple\n\n\ndef handle_return(generator, func):\n \"\"\"\n https://stackoverflow.com/questions/34073370/best-way-to-receive-the-return-va...
[ [ "matplotlib.pyplot.show", "matplotlib.pyplot.plot" ] ]
Aethiles/ppo-pytorch
[ "b3fb6bdb466056cf84115ca7b0af21d2b48185ae" ]
[ "test/understanding/test_batches.py" ]
[ "import numpy as np\nimport torch.utils.data.sampler as samplers\nimport unittest\n\n\nclass BatchTest(unittest.TestCase):\n def test_different_batches(self):\n mini_batch_size = 3\n sampler = samplers.BatchSampler(sampler=samplers.SubsetRandomSampler(range(12)),\n ...
[ [ "numpy.array_equal" ] ]
SuperSaiyan-God/PhotoMath
[ "58f7d88dde5f1e0ccc3cabc2499520d08705c734" ]
[ "object_detection/xml_to_csv.py" ]
[ "import os\nimport glob\nimport pandas as pd\nimport xml.etree.ElementTree as ET\n\n\ndef xml_to_csv(path):\n xml_list = []\n for xml_file in glob.glob(path + '/*.xml'):\n tree = ET.parse(xml_file)\n root = tree.getroot()\n for member in root.findall('object'):\n value = (root....
[ [ "pandas.DataFrame" ] ]
shikanggao/meta-dataset
[ "7b1e99009516eda3bbd5e740e178ebc37e2d6767" ]
[ "meta_dataset/models/functional_backbones.py" ]
[ "# coding=utf-8\n# Copyright 2021 The Meta-Dataset Authors.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless require...
[ [ "tensorflow.compat.v1.initializers.zeros", "tensorflow.compat.v1.nn.avg_pool", "tensorflow.compat.v1.assign", "tensorflow.compat.v1.logging.info", "tensorflow.compat.v1.reduce_prod", "tensorflow.compat.v1.shape", "tensorflow.compat.v1.equal", "tensorflow.compat.v1.get_variable_scop...
jczhao001/winkDetection
[ "a0c298ae2541a6719e09c66e18afb2c87dba0d7c" ]
[ "input1.py" ]
[ "import tensorflow as tf\nimport numpy as np\nimport os\nimport cv2\nfrom PIL import Image\nimport matplotlib.pyplot as plt\ntrain_dir_path = \"E:/test/eyeclt/0/test/\"\ndef getFile(fileDir):\n close = []\n lableclose = []\n open = []\n lableopen = []\n for file in os.listdir(fileDir):\n\n nam...
[ [ "numpy.array", "tensorflow.train.batch", "tensorflow.train.slice_input_producer", "tensorflow.read_file", "numpy.random.shuffle", "tensorflow.reshape", "tensorflow.image.resize_image_with_crop_or_pad", "tensorflow.image.per_image_standardization", "numpy.hstack", "tensorflo...
acatwithacomputer/proteus
[ "80dfad95da6ab4d18a88a035f55c26b03540a864", "80dfad95da6ab4d18a88a035f55c26b03540a864", "80dfad95da6ab4d18a88a035f55c26b03540a864" ]
[ "proteus/tests/POD/svd_burgers.py", "proteus/tests/SWFlow/solitary_reef.py", "proteus/mprans/NCLS3P.py" ]
[ "#!/usr/bin/env python\n\nfrom __future__ import print_function\nfrom __future__ import division\nfrom past.utils import old_div\nfrom burgers_init import use_deim\nfrom proteus import deim_utils,Archiver\nfrom proteus.deim_utils import read_snapshots\n\nT = 1.0\nnDTout = 100\nDT = old_div(T,float(nDTout))\n\narchi...
[ [ "numpy.savetxt", "numpy.linalg.svd" ], [ "numpy.cosh", "numpy.piecewise", "numpy.tanh", "numpy.sqrt", "numpy.abs", "numpy.select", "numpy.maximum" ], [ "numpy.copy", "numpy.ones", "numpy.save", "numpy.zeros" ] ]
asellappen/bokeh
[ "e003b82b18c8ee7fb36f23c5f877e5e16b792827" ]
[ "tests/unit/bokeh/core/test_properties.py" ]
[ "#-----------------------------------------------------------------------------\n# Copyright (c) 2012 - 2021, Anaconda, Inc., and Bokeh Contributors.\n# All rights reserved.\n#\n# The full license is in the file LICENSE.txt, distributed with this software.\n#---------------------------------------------------------...
[ [ "numpy.array" ] ]
edward-io/captum
[ "8f959950baaad00f2f9a3404d583b9f9292e35c7" ]
[ "captum/_utils/models/linear_model/train.py" ]
[ "import time\nfrom typing import Any, Callable, Dict, List, Optional\n\nimport torch\nimport torch.nn as nn\nfrom torch.utils.data import DataLoader\n\nfrom captum._utils.models.linear_model.model import LinearModel\n\n\ndef l2_loss(x1, x2, weights=None):\n if weights is None:\n return torch.mean((x1 - x2...
[ [ "numpy.concatenate", "torch.stack", "torch.norm", "torch.FloatTensor", "torch.no_grad", "torch.nn.init.xavier_uniform_", "torch.isclose", "torch.optim.lr_scheduler.ReduceLROnPlateau", "torch.mean" ] ]
ricardoprins/strawberryfields
[ "739ad44950624434375a24693a060e8a5e74c951" ]
[ "strawberryfields/circuitspecs/xunitary.py" ]
[ "# Copyright 2019-2020 Xanadu Quantum Technologies Inc.\n\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n\n# http://www.apache.org/licenses/LICENSE-2.0\n\n# Unless required by ap...
[ [ "numpy.identity", "numpy.allclose", "numpy.round" ] ]
benoitmartin88/pytorchtrainer
[ "7d73acd0802e00c3589d28bce6c42a489dcd46ea" ]
[ "pytorchtrainer/metric/mean_absolute_error.py" ]
[ "import torch\n\nfrom . import Metric\n\n\nclass MeanAbsoluteError(Metric):\n def __init__(self):\n super().__init__(\"mae\", default_value=float('inf'))\n self._absolute_error_sum = 0.\n self._total = 0\n\n def step(self, y: torch.Tensor, y_pred: torch.Tensor):\n absolute_errors =...
[ [ "torch.abs", "torch.sum" ] ]
janaSunrise/Fashion-MNIST-Tensorflow
[ "a31d23e8b06ab8b70235d692b458e5a7c14aa2f1" ]
[ "src/train.py" ]
[ "import tensorflow as tf\nimport numpy as np\nimport matplotlib.pyplot as plt\nfrom tensorflow import keras\n\nprint(f\"Using tensorflow version: {tf.__version__}\")\n\n# Get the datasets\ndata = keras.datasets.fashion_mnist\n\n(train_images, train_labels), (test_images, test_labels) = data.load_data()\n\n# The cla...
[ [ "tensorflow.keras.layers.Flatten", "matplotlib.pyplot.grid", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.yticks", "matplotlib.pyplot.figure", "tensorflow.keras.layers.Dense", "matplotlib.pyplot.show", "matplotlib.pyplot.imshow", "matplotlib.pyplot.xticks", "matplotlib.py...
HochulHwang/gc_test
[ "c42e9ec3392bc02eef5e3943ec3bf79456e91bf9" ]
[ "src/inference/train_val.py" ]
[ "from utils.meter import *\nimport time\nimport torch\nimport ipdb\nimport sys\nimport torch.nn as nn\n# from utils.others import *\nimport matplotlib\nfrom utils.loss import *\n\n\ndef make_variable_all_input(dict_input, cuda=False):\n dict_input_var = {}\n for k, v in dict_input.items():\n var = torc...
[ [ "torch.autograd.Variable", "torch.no_grad" ] ]
zhaolotelli/FedLearn
[ "b5ddb26acbee3218b11894fb7ca7ce24677c0b50" ]
[ "flearn/utils/sub.py" ]
[ "import copy\r\nimport numpy as np\r\n\r\ndef boot(client_data, sub_rate):\r\n n = len(client_data)\r\n rand_ind = np.random.choice(n, np.int(np.floor(n * sub_rate)))\r\n sub_data = copy.deepcopy(client_data)\r\n X = client_data.X\r\n y = client_data.y\r\n sub_data.X = X[rand_ind]\r\n sub_data....
[ [ "numpy.floor" ] ]
karamach/gtsam
[ "5cbb9dfd6c5bc6a38edd230fd0b9d9c7e5006b0b" ]
[ "cython/gtsam/tests/test_SimpleCamera.py" ]
[ "import math\nimport numpy as np\nimport unittest\n\nfrom gtsam import Pose2, Point3, Rot3, Pose3, Cal3_S2, SimpleCamera\n\nK = Cal3_S2(625, 625, 0, 0, 0)\n\nclass TestSimpleCamera(unittest.TestCase):\n\n def test_constructor(self):\n pose1 = Pose3(Rot3(np.diag([1, -1, -1])), Point3(0, 0, 0.5))\n c...
[ [ "numpy.diag" ] ]
spaicer/explanation-generator-module
[ "9c7c9322ad43a73e452d9063cb3ae6c0a9309237" ]
[ "src/core/aeas.py" ]
[ "# credit https://github.com/ronniemi/explainAnomaliesUsingSHAP\n\nimport numpy as np\nimport pandas as pd\n\nfrom tensorflow.keras.models import Model\nfrom tensorflow.keras.layers import Input, Dense\nfrom tensorflow.keras import regularizers\nfrom tensorflow.keras.callbacks import EarlyStopping\n\nimport shap\ni...
[ [ "numpy.array", "tensorflow.keras.regularizers.l1", "tensorflow.keras.layers.Input", "numpy.median", "pandas.DataFrame", "tensorflow.keras.models.Model", "numpy.mean", "numpy.fabs", "numpy.power", "tensorflow.keras.regularizers.l2", "pandas.concat", "tensorflow.keras...
cgvvxx/Font_Style_Transfer
[ "1ff1e9f7bd1fef8f7736da90f917ad11b8fce964" ]
[ "data_modules/crawling.py" ]
[ "from selenium import webdriver\nfrom selenium.webdriver.common.by import By\nfrom selenium.webdriver.support import expected_conditions as EC\nfrom selenium.webdriver.support.ui import WebDriverWait\nfrom webdriver_manager.chrome import ChromeDriverManager\nimport pandas as pd\nimport warnings\nimport zipfile\nimp...
[ [ "pandas.DataFrame", "pandas.read_csv" ] ]
interesaaat/onnxconverter-common
[ "5f670d71184abb1f4601193f552bdda6c1f59555" ]
[ "onnxconverter_common/onnx_ops.py" ]
[ "# Copyright (c) Microsoft Corporation. All rights reserved.\n# Licensed under the MIT License. See License.txt in the project root for\n# license information.\n###############################################################################\n\n# This file contains some high-level APIs for applying operations on var...
[ [ "numpy.array", "numpy.iinfo" ] ]
protivinsky/python-utils
[ "145fc8e6385df745c7b73fa0dfbb17abf6f58f82" ]
[ "libs/plots.py" ]
[ "import os\r\nfrom yattag import Doc, indent\r\nfrom libs.utils import create_stamped_temp, slugify\r\nimport matplotlib.pyplot as plt\r\n\r\n# NOTE - Does not work out of the box, needs a fix:\r\n#\r\n# Annoyingly, the js loading of subpages violates Cross-Origin Requests policy in all browsers\r\n# when files are...
[ [ "matplotlib.pyplot.close" ] ]
xizhihuang/one_model_one_week
[ "a84fecd93a0fd60e1bbb923d78fe47d453938126" ]
[ "linear_regression/regression.py" ]
[ "# -*- coding:utf-8 -*-\nimport numpy as np\nnp.random.seed(1337)\nfrom keras.models import Sequential\nfrom keras.layers import Dense\nimport matplotlib.pyplot as plt\n\nX = np.linspace(-1, 1, 500)\nnp.random.shuffle(X)\nY = 0.5 * X + 0.2 + np.random.normal(0, 0.05, (500,))\n\nX_train, Y_train = X[:400], Y[:400]\n...
[ [ "numpy.random.normal", "numpy.random.seed", "matplotlib.pyplot.plot", "numpy.random.shuffle", "matplotlib.pyplot.show", "matplotlib.pyplot.scatter", "numpy.linspace" ] ]
Evanc123/chainer
[ "929af7189b1271683200aa9b0ba6da2dd3dee110", "929af7189b1271683200aa9b0ba6da2dd3dee110" ]
[ "tests/chainer_tests/functions_tests/activation_tests/test_softmax.py", "tests/chainer_tests/initializer_tests/test_normal.py" ]
[ "import unittest\n\nimport numpy\n\nimport chainer\nfrom chainer.backends import cuda\nfrom chainer import functions\nfrom chainer import gradient_check\nfrom chainer import testing\nfrom chainer.testing import attr\n\n\n@testing.parameterize(*testing.product({\n 'shape_axis':\n [{'shape': None, 'axis': 1...
[ [ "numpy.ndindex", "numpy.array", "numpy.rollaxis", "numpy.exp", "numpy.random.uniform" ], [ "numpy.empty" ] ]
SteveDoyle2/pynastran
[ "14798312ac0419857ce030ee367f924b4924f9fd" ]
[ "pyNastran/op2/tables/ogs_grid_point_stresses/ogs_surface_stresses.py" ]
[ "import warnings\nfrom typing import List\nimport numpy as np\n\nfrom pyNastran.op2.result_objects.op2_objects import ScalarObject, get_times_dtype\nfrom pyNastran.f06.f06_formatting import (\n write_floats_10e, _eigenvalue_header)\nfrom pyNastran.op2.writer.utils import fix_table3_types\nfrom pyNastran.op2.op2_...
[ [ "numpy.isnan", "numpy.empty", "numpy.array_equal", "numpy.zeros", "numpy.allclose", "numpy.float32", "numpy.int32" ] ]
jmetteUni/CoTeDe-modified
[ "3f1142811f051eb023337b7f80a513ad53866d68", "3f1142811f051eb023337b7f80a513ad53866d68" ]
[ "cotede/qctests/gradient_depthconditional.py", "cotede/qctests/morello2014.py" ]
[ "#!/usr/bin/env python\n# -*- coding: utf-8 -*-\n# Licensed under a 3-clause BSD style license - see LICENSE.rst\n\n\"\"\"\n\n\"\"\"\n\nimport logging\n\nimport numpy as np\nfrom numpy import ma\n\nfrom .qctests import QCCheckVar\nfrom .gradient import curvature\n\nmodule_logger = logging.getLogger(__name__)\n\n\nc...
[ [ "numpy.ma.getmaskarray", "numpy.shape", "numpy.atleast_1d", "numpy.isfinite", "numpy.absolute" ], [ "numpy.all", "numpy.shape" ] ]
sparkroy/DAML
[ "8a6d0869771bb35d2084d055123bbe790ecb8cf7" ]
[ "lib/common/utils.py" ]
[ "# -*- coding: utf-8 -*-\n\n\nfrom collections import defaultdict\nimport itertools\nimport os\nimport numpy as np\nimport yaml\nfrom lib.functions.triplet_loss import triplet_loss as F_tloss\nfrom lib.common.evaluation import evaluate_cluster\n\nimport chainer\nimport torch\nimport torch.nn.functional as F\n\n\nim...
[ [ "numpy.random.choice", "numpy.tile", "numpy.mean", "torch.sum", "numpy.concatenate", "numpy.log", "numpy.arange", "torch.nn.functional.relu", "numpy.int32", "numpy.array", "numpy.delete", "torch.nn.functional.concat", "numpy.argsort", "numpy.array_split", ...
yougoforward/tensorpackwithmscnn
[ "3c61c31892a1d954678fcef22f1243ab252e0015", "3c61c31892a1d954678fcef22f1243ab252e0015", "8d5ae5cc2cfcf2e4e53b4d1064ac9e727f736d09" ]
[ "tensorpack/dataflow/image.py", "tensorpack/callbacks/param.py", "examples/SpatialTransformer/mnist-addition.py" ]
[ "# -*- coding: UTF-8 -*-\n# File: image.py\n\n\nimport numpy as np\nimport copy as copy_mod\nfrom contextlib import contextmanager\nfrom .base import RNGDataFlow\nfrom .common import MapDataComponent, MapData\nfrom ..utils import logger\nfrom ..utils.argtools import shape2d\n\n__all__ = ['ImageFromFile', 'AugmentIm...
[ [ "numpy.issubdtype" ], [ "tensorflow.local_variables", "tensorflow.global_variables" ], [ "tensorflow.nn.in_top_k", "tensorflow.constant_initializer", "tensorflow.matmul", "tensorflow.reshape", "tensorflow.nn.softmax", "tensorflow.concat", "tensorflow.transpose", ...
johannespitz/MNF_VBNN
[ "e274a57cac03282e8ff3181c831e650b024b14a2" ]
[ "mutual_information.py" ]
[ "import sys\nimport numpy as np\nfrom tqdm import tqdm\nimport matplotlib.pyplot as plt\nimport seaborn as sns\n\n\ndef _compute_mi(model, samples, num_runs):\n predictions_list = []\n for idx in tqdm(range(num_runs), file=sys.stdout):\n predictions_list.append(model.predict(samples, batch_size=10000))...
[ [ "numpy.log", "matplotlib.pyplot.legend", "numpy.asarray", "matplotlib.pyplot.subplots" ] ]
likith012/distill-grammar
[ "04ff5e07337789edfe57f21f85e30e7992ae90d9" ]
[ "deploy/convert_onnx.py" ]
[ "\"\"\"Convert the model to ONN format\n\"\"\"\n\n__author__ = \"Likith Reddy\"\n__version__ = \"1.0.0\"\n__email__ = \"likith012@gmail.com\"\n\n\nimport torch\nimport torch.nn as nn\nimport torch.onnx\nimport sys, os\n\nsys.path.insert(0, os.path.join(sys.path[0], '../'))\n\nfrom configs import config\nfrom src.da...
[ [ "torch.nn.DataParallel", "torch.onnx.export", "torch.cuda.device_count" ] ]
dsshim0125/grmc
[ "a4d02b66055b33df07a8136cd6b11020b27ac4c5" ]
[ "evaluate_pytorch.py" ]
[ "import os\r\nimport glob\r\nimport time\r\nimport argparse\r\nimport torch\r\nfrom torch import nn\r\nfrom model.densedepth import Model\r\nfrom model.fcrn import ResNet\r\nfrom utils import evaluate\r\nfrom matplotlib import pyplot as plt\r\n\r\n\r\n# Argument Parser\r\nparser = argparse.ArgumentParser(descriptio...
[ [ "torch.load" ] ]
evhub/compiled-cocotest
[ "7bfb1c92ec1f1cea48f12280faf95d3c7ed8b8e0" ]
[ "dest/extras.py" ]
[ "#!/usr/bin/env python\n# -*- coding: utf-8 -*-\n# __coconut_hash__ = 0x58bfe0d3\n\n# Compiled with Coconut version 1.4.1 [Ernest Scribbler]\n\n# Coconut Header: -------------------------------------------------------------\n\nfrom __future__ import print_function, absolute_import, unicode_literals, division\nimpor...
[ [ "numpy.array", "numpy.arange", "numpy.vectorize" ] ]
brandontrabucco/cs285
[ "0ed5fca1d897bf197a43e2be14b204606ae4c36c" ]
[ "cs285/distributions/continuous/tanh_gaussian.py" ]
[ "\"\"\"Author: Brandon Trabucco, Copyright 2019, MIT License\"\"\"\n\n\nfrom cs285.distributions.continuous.gaussian import Gaussian\nimport tensorflow as tf\nimport math\n\n\nclass TanhGaussian(Gaussian):\n\n def __init__(\n self,\n *args,\n std=None,\n **kwargs\n ):\n Gaus...
[ [ "tensorflow.tanh", "tensorflow.clip_by_value", "tensorflow.keras.models.clone_model", "tensorflow.math.softplus" ] ]
Pgaskins/mycode.py
[ "ba5bbe5a6bb727d535ff5c984f7e6ac9429bbf24" ]
[ "graphing/graphmaker-csvreader.py" ]
[ "#!/usr/bin/python3\n\n# from python std library\nimport csv\n\n# python3 -m pip install np\nimport numpy as np\n# python3 -m pip install matplotlib\nimport matplotlib\nmatplotlib.use('Agg')\n# sudo apt install python3-tk\nimport matplotlib.pyplot as plt\n\ndef parsecsvdata():\n \"\"\"returns a list. [0] is LAN ...
[ [ "matplotlib.use", "matplotlib.pyplot.savefig", "matplotlib.pyplot.title", "matplotlib.pyplot.legend", "numpy.arange", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.bar", "matplotlib.pyplot.xticks" ] ]
grebtsew/Object-and-Facial-detection-in-python
[ "57c4bf8d934cc8d6dbaa0cfc56b2b343795ceef1" ]
[ "tensorflow/multi threaded implementation/utils/detect_and_align.py" ]
[ "from six import string_types, iteritems\nfrom scipy import misc\nimport tensorflow as tf\nimport numpy as np\nimport os\nimport cv2\n\n\ndef align_image(img, pnet, rnet, onet):\n margin = 44\n image_size = 160\n\n img_size = np.asarray(img.shape)[0:2]\n bounding_boxes, landmarks, accur = detect_face(im...
[ [ "tensorflow.exp", "tensorflow.nn.conv2d", "numpy.minimum", "numpy.tile", "numpy.load", "numpy.mean", "scipy.misc.imresize", "tensorflow.reshape", "numpy.where", "numpy.zeros_like", "numpy.empty", "numpy.flipud", "tensorflow.variable_scope", "numpy.transpose"...
ejmichaud/torch-foresight
[ "e36a8fdd65f0432b9fa25a5127412b081159956b" ]
[ "tests/test_ei.py" ]
[ "import pytest\n\nimport torch\nimport torch.nn as nn\nimport torch.nn.functional as F\n\nfrom foresight import ei\n\n\n##################################\n#### H ####\n##################################\n\ndef test_H_0():\n x = torch.zeros((4,))\n x[1] = 1\n assert ei.H(x).item() ==...
[ [ "torch.zeros", "torch.nn.Linear", "torch.nn.AvgPool2d", "torch.ones", "torch.nn.Conv2d", "torch.tensor", "torch.flatten", "torch.randn" ] ]
HoseungCha/mist-rnns
[ "523d1fa769a7ed29fce22138d1993a8acca28c41" ]
[ "mnist_train.py" ]
[ "import os\nimport sys\nimport argparse\nimport shutil\nimport time\n\nimport numpy as np\nimport tensorflow as tf\n\nimport models\nimport optimizers\nimport utils\n\nimport mnist\n\nINPUT_SIZE = 1\nTARGET_SIZE = 10\nBATCH_SIZE = 100\nVAL_BATCH_SIZE = 100\nNUM_OPT_STEPS = 15000\nNUM_STEPS_PER_TRAIN_SUMMARY = 10\nN...
[ [ "numpy.pad", "tensorflow.summary.scalar", "tensorflow.argmax", "tensorflow.Session", "tensorflow.train.Saver", "numpy.mean", "tensorflow.ConfigProto", "tensorflow.placeholder", "numpy.arange", "tensorflow.to_float", "numpy.argmax", "tensorflow.summary.merge_all", ...
slac-lcls/ami
[ "0feb89248350b80a85689d8230277cea5bf4d470" ]
[ "ami/graph_nodes.py" ]
[ "import abc\nimport operator\nimport numpy as np\nfrom networkfox import operation\n\n\nclass Transformation(abc.ABC):\n\n def __init__(self, **kwargs):\n \"\"\"\n Keyword Arguments:\n name (str): Name of node\n inputs (list): List of inputs\n outputs (list): List o...
[ [ "numpy.roll", "numpy.zeros" ] ]
headrockz/data-analysis-challenge
[ "a0bec70654c58698648fd7c7179dd2d451d33f58" ]
[ "utils/load_idh.py" ]
[ "import sqlite3\nimport pandas as pd\n\n\nclass LoadIDH:\n def __init__(self, file):\n self.conn = sqlite3.connect(file)\n self.cursor = self.conn.cursor()\n\n def select(self, municipio):\n consult = 'select id_municipio from municipios where municipio like ?'\n self.cursor.execut...
[ [ "pandas.read_excel" ] ]
kdatta/tensorpack
[ "963e5100aa2f91d3a4b02f809b2cfbb50be9094e" ]
[ "tensorpack/input_source/input_source_base.py" ]
[ "# -*- coding: utf-8 -*-\n# File: input_source_base.py\n\nimport copy\nfrom abc import ABCMeta, abstractmethod\nfrom contextlib import contextmanager\nimport six\nimport tensorflow as tf\n\nfrom ..callbacks.base import CallbackFactory\nfrom ..tfutils.common import get_op_tensor_name\nfrom ..utils import logger\nfro...
[ [ "tensorflow.name_scope" ] ]
sharma-arjun/gym
[ "e689f93a425d97489e590bba0a7d4518de0dcc03" ]
[ "gym/envs/classic_control/cartpole.py" ]
[ "\"\"\"\nClassic cart-pole system implemented by Rich Sutton et al.\nCopied from http://incompleteideas.net/sutton/book/code/pole.c\npermalink: https://perma.cc/C9ZM-652R\n\"\"\"\n\nimport math\nimport gym\nfrom gym import spaces, logger\nfrom gym.utils import seeding\nimport numpy as np\n\nclass CartPoleEnv(gym.En...
[ [ "numpy.finfo", "numpy.array" ] ]
airqj/maskrcnn-benchmark
[ "210d1abf24d0edf8ee43c3a49c3da9cde6dddad7", "210d1abf24d0edf8ee43c3a49c3da9cde6dddad7" ]
[ "tools/train_net.py", "maskrcnn_benchmark/engine/MyInference.py" ]
[ "# Copyright (c) Facebook, Inc. and its affiliates. All Rights Reserved.\nr\"\"\"\nBasic training script for PyTorch\n\"\"\"\n\n# Set up custom environment before nearly anything else is imported\n# NOTE: this should be the first import (no not reorder)\nfrom maskrcnn_benchmark.utils.env import setup_environment #...
[ [ "torch.device", "torch.distributed.init_process_group", "torch.nn.parallel.DistributedDataParallel", "torch.cuda.set_device", "torch.cuda.empty_cache" ], [ "torch.device", "torch.no_grad", "torch.distributed.is_initialized", "torch.distributed.get_world_size" ] ]
WolfNiu/AdversarialDialogue
[ "de406d3b624f9500e79bef7c5bc10e24376fefa8" ]
[ "src/basic/ubuntu_data_generator.py" ]
[ "\n# coding: utf-8\n\n# In[1]:\n\n\n\"\"\"\nTodo: combine read_lines, load_pickle, etc... to one single function load_file(),\n and use if statement to see which suffix the file has. Also keep an optional param\n suffix=None just in case we want to force it to load with a certain format\n\n\"\"\"\nfrom random...
[ [ "numpy.percentile" ] ]
vipermu/dgl
[ "c9ac6c9889423019977e431c8b74a7b6c70cdc01", "c9ac6c9889423019977e431c8b74a7b6c70cdc01" ]
[ "examples/pytorch/rgcn/link_predict.py", "examples/pytorch/rgcn/entity_classify.py" ]
[ "\"\"\"\nModeling Relational Data with Graph Convolutional Networks\nPaper: https://arxiv.org/abs/1703.06103\nCode: https://github.com/MichSchli/RelationPrediction\n\nDifference compared to MichSchli/RelationPrediction\n* Report raw metrics instead of filtered metrics.\n* By default, we use uniform edge sampling in...
[ [ "torch.nn.functional.binary_cross_entropy_with_logits", "torch.arange", "numpy.mean", "torch.from_numpy", "torch.cuda.set_device", "torch.cuda.is_available", "torch.LongTensor", "torch.load", "torch.nn.init.calculate_gain", "torch.Tensor", "torch.nn.Embedding", "tor...
Qin-J/Multi-site-transfer-classification-of-major-depressive-disorder
[ "f6af292388ec83a9851a2254f38e8d90adfe4e6c" ]
[ "graph.py" ]
[ "# Copyright (c) 2016 Michaël Defferrard\n#\n# Permission is hereby granted, free of charge, to any person obtaining a copy\n# of this software and associated documentation files (the \"Software\"), to deal\n# in the Software without restriction, including without limitation the rights\n# to use, copy, modify, merg...
[ [ "numpy.array", "numpy.empty", "numpy.random.permutation", "numpy.exp", "numpy.mean", "numpy.random.uniform", "numpy.random.randint", "numpy.arange", "numpy.argsort", "numpy.sqrt", "numpy.abs", "numpy.linspace", "numpy.meshgrid" ] ]
happy-jihye/alias-free-gan-encoder
[ "d54df2fc1ee57b2d3259e7f64a79b7fbdc6a4631" ]
[ "model.py" ]
[ "import math\r\n\r\nimport torch\r\nfrom torch import nn\r\nfrom torch.nn import functional as F\r\n\r\nfrom stylegan2.model import PixelNorm, EqualLinear, EqualConv2d, ConvLayer, ResBlock\r\nfrom stylegan2.op import conv2d_gradfix, upfirdn2d, fused_leaky_relu\r\n\r\n\r\ndef polyval(coef, x):\r\n res = 0\r\n\r\n...
[ [ "torch.ger", "torch.cos", "torch.cat", "torch.sqrt", "torch.zeros", "torch.sinc", "torch.arange", "torch.nn.ModuleList", "torch.nn.Sequential", "torch.sin", "torch.norm", "torch.linspace", "torch.abs", "torch.tensor", "torch.as_tensor", "torch.randn"...
cutz-j/AR-project
[ "50d4f407a4f2c42e12bf2bcd54c436df6fa3c9fa", "50d4f407a4f2c42e12bf2bcd54c436df6fa3c9fa" ]
[ "MobileNetSSD/realsense_ssd.py", "RealSenseSDK/API_test.py" ]
[ "### TENSORFLOW API: MobilnetV2_SSD ###\n## Import packages ##\nimport numpy as np\nimport os\nimport six.moves.urllib as urllib\nimport sys\nimport tensorflow as tf\nfrom distutils.version import StrictVersion\nfrom collections import defaultdict\nfrom io import StringIO\n## 시각화 Tool ##\nfrom matplotlib import pyp...
[ [ "numpy.zeros_like", "numpy.zeros", "tensorflow.Graph", "tensorflow.Session", "tensorflow.GraphDef", "tensorflow.import_graph_def", "tensorflow.gfile.GFile", "numpy.frombuffer", "numpy.squeeze", "numpy.expand_dims" ], [ "numpy.asanyarray", "matplotlib.pyplot.imsh...
beAWARE-project/crisis-classification
[ "2061a2ee57fd502bd973fdfcffc6d7098049b5ed" ]
[ "main/src/CRCL/FloodCRisisCLassification/CRCL_FLOOD_Forecast_v15.py" ]
[ "# Created Date: 11/09/2018\n# Modified Date: 12/09/2018\n#\n# Implements the 1st algorithm of Crisis Classification module\n# based on the predicted water levels from AMICO for particular 60\n# river sections in the next 54h starting at a specific date/time or\n# the last execution of AMICO module.\n#\n# Groups of...
[ [ "numpy.array", "pandas.ExcelWriter", "pandas.DataFrame.from_dict", "pandas.DataFrame", "pandas.concat", "pandas.read_csv" ] ]
yanxu55/sasoptpy
[ "17006707212c87fdf90ee18b9d23a2c35eae421c", "17006707212c87fdf90ee18b9d23a2c35eae421c" ]
[ "sasoptpy/utils.py", "examples/mining_optimization.py" ]
[ "#!/usr/bin/env python\n# encoding: utf-8\n#\n# Copyright SAS Institute\n#\n# Licensed under the Apache License, Version 2.0 (the License);\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# U...
[ [ "pandas.set_option", "pandas.DataFrame.from_dict", "pandas.DataFrame", "pandas.MultiIndex.from_tuples", "pandas.option_context" ], [ "pandas.DataFrame" ] ]
Sha-Lab/SynPo
[ "8ac35a01d2c810187b9c14b914bcb792ed73caa9" ]
[ "train_gridworld.py" ]
[ "import logging\nimport argparse\nimport ipdb\nimport random\nfrom datetime import datetime\nfrom itertools import product\nfrom tqdm import tqdm\nimport numpy as np\nimport pickle\nfrom IPython import embed\nfrom ipdb import slaunch_ipdb_on_exception\n\nfrom synpo.agent import *\nfrom synpo.component import *\nfro...
[ [ "numpy.random.randint", "numpy.mean" ] ]
Highroad-Consulting/keras-yolo3
[ "52323cfd21040e96e53ae106a979841c2252a05b" ]
[ "yolo3/model.py" ]
[ "\"\"\"YOLO_v3 Model Defined in Keras.\"\"\"\n\nfrom functools import wraps\n\nimport numpy as np\nimport tensorflow as tf\nfrom keras import backend as K\nfrom keras.layers import Conv2D, Add, ZeroPadding2D, UpSampling2D, Concatenate, MaxPooling2D\nfrom keras.layers.advanced_activations import LeakyReLU\nfrom kera...
[ [ "numpy.array", "tensorflow.image.non_max_suppression", "numpy.minimum", "numpy.argmax", "numpy.floor", "tensorflow.boolean_mask", "numpy.expand_dims", "numpy.maximum" ] ]
ayan-iiitd/scikit-learn
[ "02dcedf9ad553a85f43570e78ccbdbb1cea46ef8" ]
[ "sklearn/utils/estimator_checks.py" ]
[ "import types\nimport warnings\nimport pickle\nimport re\nfrom copy import deepcopy\nfrom functools import partial, wraps\nfrom inspect import signature\n\nimport numpy as np\nfrom scipy import sparse\nfrom scipy.stats import rankdata\nimport joblib\n\nfrom . import IS_PYPY\nfrom .. import config_context\nfrom ._te...
[ [ "numpy.mean", "numpy.where", "numpy.finfo", "numpy.sort", "scipy.stats.rankdata", "numpy.issubdtype", "numpy.dtype", "numpy.full", "numpy.empty", "numpy.log", "pandas.DataFrame", "numpy.core.numerictypes.allTypes.values", "numpy.take", "numpy.arange", "n...
Sirius207/Reinforcement-Learning-Algorithms
[ "85a1297c6a03fa8316f53ccee4ad477684f00ef4" ]
[ "dqnSample.py" ]
[ "# From https://towardsdatascience.com/reinforcement-learning-w-keras-openai-dqns-1eed3a5338c\n\nimport gym\nimport numpy as np\nimport random\nfrom keras.models import Sequential\nfrom keras.layers import Dense, Dropout\nfrom keras.optimizers import Adam\n\nfrom collections import deque\n\nclass DQN:\n def __in...
[ [ "numpy.random.random" ] ]
AmedeoSapio/tensorflow
[ "38e0922d1e2dcd572379af4496f878492e9f689a" ]
[ "tensorflow/python/kernel_tests/lookup_ops_test.py" ]
[ "# Copyright 2017 The TensorFlow Authors. All Rights Reserved.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless requ...
[ [ "tensorflow.python.ops.lookup_ops.TextFileStringTableInitializer", "tensorflow.python.ops.lookup_ops.TextFileInitializer", "tensorflow.python.framework.test_util.assert_ops_in_graph", "tensorflow.python.framework.ops.get_collection", "tensorflow.python.platform.test.main", "tensorflow.pyth...
goel96vibhor/semisup-adv
[ "30576066663e999d6ae9cc06fd5016d5886dd0b2" ]
[ "ti_cifar_dataset.py" ]
[ "\"\"\"\nDatasets with unlabeled (or pseudo-labeled) data\n\"\"\"\n\nfrom torchvision.datasets import CIFAR10, SVHN, MNIST\nfrom torch.utils.data import Sampler, Dataset\nimport torch\nimport numpy as np# from PIL import Image\nimport cifar_own\nimport qmnist_own\nimport os\nfrom PIL import Image\nimport pickle\n# ...
[ [ "numpy.array", "torch.Tensor" ] ]
janismdhanbad/PointCNN
[ "23b7f1873b607ebeb5d63e466a65565405a4909a" ]
[ "data_conversions/prepare_s3dis_data.py" ]
[ "#!/usr/bin/python3\n'''Prepare Data for S3DIS Segmentation Task.'''\n\nfrom __future__ import absolute_import\nfrom __future__ import division\nfrom __future__ import print_function\n\nimport os\nimport sys\nimport math\nimport h5py\nimport argparse\nimport numpy as np\nfrom datetime import datetime\n\nsys.path.ap...
[ [ "numpy.concatenate", "numpy.repeat", "numpy.array", "numpy.zeros", "numpy.load", "numpy.split", "numpy.random.shuffle", "numpy.amax", "numpy.argsort", "numpy.amin", "numpy.cumsum", "numpy.average", "numpy.unique", "numpy.floor" ] ]
hellock/mmaction2
[ "def3b651ab7818ece637d8637dddacbca027910c" ]
[ "tests/test_dataset.py" ]
[ "import os\nimport os.path as osp\nimport tempfile\n\nimport mmcv\nimport numpy as np\nimport pytest\nfrom numpy.testing import assert_array_equal\n\nfrom mmaction.datasets import (ActivityNetDataset, RawframeDataset,\n RepeatDataset, VideoDataset)\n\n\nclass TestDataset(object):\n\n ...
[ [ "numpy.equal", "numpy.array", "numpy.array_equal" ] ]
zhihansh/federated-oss
[ "38cfcb05702ff7297db76d3ccb5f5afef53ca09b" ]
[ "tensorflow_federated/python/learning/federated_sgd_test.py" ]
[ "# Copyright 2018, The TensorFlow Federated Authors.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by a...
[ [ "tensorflow.constant", "tensorflow.keras.layers.Dense" ] ]
stenczelt/pyGSM
[ "48e7a710744ec768e2c4a0f4d8dc1f9ffd948ce1" ]
[ "pygsm/optimizers/lbfgs.py" ]
[ "\n\n# standard library imports\nimport os\nimport sys\nfrom io import StringIO\n\n# third party\nimport numpy as np\nfrom scipy.optimize.lbfgsb import LbfgsInvHessProduct\n\n# local application imports\nfrom pygsm import utilities\n\nfrom .base_optimizer import base_optimizer\n\n\nclass iterationData:\n \"\"\"d...
[ [ "numpy.zeros_like", "numpy.linalg.norm", "numpy.dot", "numpy.reshape", "numpy.copy", "scipy.optimize.lbfgsb.LbfgsInvHessProduct", "numpy.absolute" ] ]
MC-kit/mckit-meshes
[ "8aa06ff95ffd1dabac95f399d45047325c265f78" ]
[ "src/mckit_meshes/mesh/geometry_spec.py" ]
[ "\"\"\"Common mesh geometry specification classes and functions.\n\n## Relative or absolute coordinates\n\n There are variations when coordinates are presented as relative to origin\n or absolute. This depends on is output for specification, or input/output\n to Weight of Meshtal files and is it cartesian ...
[ [ "numpy.dot", "numpy.array_equal", "numpy.cos", "numpy.max", "numpy.sin", "numpy.linalg.norm", "numpy.arcsin", "numpy.logical_and", "numpy.eye", "numpy.sqrt", "numpy.cross", "numpy.vstack", "numpy.square", "numpy.array", "numpy.zeros", "numpy.isscalar...
crcresearch/GOS
[ "a359f54f9477c1785501bd07a05ccbb8d122a0c0" ]
[ "examples/migration/migration.py" ]
[ "import numpy as np\nimport pandas as pd\nimport data as data\nfrom constants import POPULATION_SCALE, MIGRATION_THRESHOLD, PROCESSES, SPLITS, BRAIN_DRAIN_THRESHOLD\nfrom gos import Globe\nimport sys\n\n# The attributes for each agent.\nworld_columns = [\"Country\", \"Income\", \"High Income\", \"Employed\", \"Atta...
[ [ "numpy.random.choice", "numpy.empty", "numpy.random.seed", "numpy.random.mtrand.RandomState", "numpy.random.randint", "numpy.dtype" ] ]
JinheonBaek/pytorch_geometric
[ "dfd32d08a3d8191d6290e53458d4eda515d04fd6" ]
[ "torch_geometric/utils/convert.py" ]
[ "from typing import Optional, Union, Tuple, List\n\nfrom collections import defaultdict\n\nimport torch\nimport scipy.sparse\nfrom torch import Tensor\nfrom torch.utils.dlpack import to_dlpack, from_dlpack\n\nimport torch_geometric.data\n\nfrom .num_nodes import maybe_num_nodes\n\n\ndef to_scipy_sparse_matrix(edge_...
[ [ "torch.utils.dlpack.to_dlpack", "torch.cat", "torch.stack", "torch.is_tensor", "torch.from_numpy", "torch.tensor" ] ]
zhubonan/parsevasp
[ "ac929f324f33e03543f0b4cb4b11eb426aab2199" ]
[ "parsevasp/vasprun.py" ]
[ "#!/usr/bin/python\nimport sys\nimport os\nimport numpy as np\nimport logging\nimport mmap\nimport copy\n\nfrom parsevasp import constants\nfrom parsevasp import utils\nfrom parsevasp.base import BaseParser\n\nfrom lxml import etree\n\n# Try to import lxml, if not present fall back to\n# intrinsic ElementTree\nlxml...
[ [ "numpy.array", "numpy.asarray", "numpy.ascontiguousarray", "numpy.split", "numpy.swapaxes", "numpy.append", "numpy.fromstring" ] ]
pdxgx/immunorx_response_pipeline
[ "5a3faa72370e96545b46caa790090d022eaa5ece" ]
[ "scripts/process_netctlpan_results.py" ]
[ "#!/usr/bin/env python\n\nfrom __future__ import print_function\nfrom collections import defaultdict\nfrom numpy import median\nimport argparse\nimport glob\nimport os\nimport pickle\n\nif __name__ == \"__main__\":\n\n\t# Parse command line options\n\tparser = argparse.ArgumentParser()\n\tparser.add_argument('-m', ...
[ [ "numpy.median" ] ]
MW55/ChimeraMATE
[ "0af276fb7c89f529b18348d52d3738bcf84d671e" ]
[ "setup.py" ]
[ "from distutils.core import setup\nfrom Cython.Build import cythonize\nimport numpy\n\nsetup(ext_modules = cythonize('chimeramate_main.pyx'),include_dirs=[numpy.get_include()])\n" ]
[ [ "numpy.get_include" ] ]
travc/ddtool
[ "33ef02afb4ebf62823f285d1dc6ead125f39bf54" ]
[ "temps2daily_gui.py" ]
[ "#!/usr/bin/env python3\nimport os\nimport tkinter as tk\nfrom tkinter import ttk\nfrom tkinter.scrolledtext import ScrolledText\nimport tkinter.filedialog\nfrom multicolumn_listbox import Multicolumn_Listbox\n\nimport numpy as np\nimport pandas as pd\nfrom collections import OrderedDict as ordereddict\n\nclass App...
[ [ "pandas.read_csv" ] ]
Nintendofan885/wiki-detox
[ "571a3e4ae13ecf7a564a01bcf16507f0a87351a4" ]
[ "src/analysis/load_utils.py" ]
[ "import os\nimport pandas as pd\nimport re\n\n\ndef load_diffs(keep_diff = False):\n \n nick_map = {\n 'talk_diff_no_admin_sample.tsv': 'sample',\n 'talk_diff_no_admin_2015.tsv': '2015',\n 'all_blocked_user.tsv': 'blocked',\n 'd_annotated.tsv': 'annotated',\n }\n\n base = '.....
[ [ "pandas.to_datetime", "pandas.read_csv", "pandas.concat" ] ]
anisotropi4/goldfinch
[ "eb0f3c76f193e548bbd3b37f3223002431f1cc92" ]
[ "xl2tsv/xl2ndjson.py" ]
[ "#!/usr/bin/env python3\n\nimport pandas as pd\nimport argparse\nimport os\nimport sys\n\nparser = argparse.ArgumentParser(description='Dump xls(x) files tab(s) to .tsv files, to the (default output) path')\n\nparser.add_argument('inputfiles', type=str, nargs='*', help='name of xls-file to process')\n\ntabgroup = p...
[ [ "pandas.read_excel" ] ]
priyamDalmia/predator-prey
[ "0902e305f029d164966c4c65cf1498d5406fe3ab" ]
[ "data/replay_buffer.py" ]
[ "import random\nimport numpy as np\nimport pdb\nimport gc\n\nclass ReplayBuffer():\n def __init__(self, buffer_size, batch_size, state_size):\n self.buffer_size = buffer_size\n self.batch_size = batch_size\n self.state_size = state_size\n self.counter = 0\n # memory \n s...
[ [ "numpy.random.choice", "numpy.zeros" ] ]
YB27/GPy
[ "abef7b3deec593f02cfbed81929b21c660e7069c" ]
[ "GPy/examples/regressionCensored.py" ]
[ "\n''' temporary : Use this to use the forked version of GPy'''\nimport sys\nsys.path.insert(1, '/home/breux/GPy')\n\nimport numpy as np\nimport matplotlib.pyplot as plt\nimport GPy\n'''\nGaussian Processes regression with censored data example using artificial data as in \n\"Gaussian Process Regression with Censor...
[ [ "numpy.delete", "numpy.sin", "matplotlib.pyplot.xlim", "numpy.ndenumerate", "numpy.zeros", "numpy.random.seed", "matplotlib.pyplot.title", "matplotlib.pyplot.plot", "matplotlib.pyplot.subplots", "numpy.sqrt", "numpy.put", "matplotlib.pyplot.show", "numpy.linspac...
flowersteam/TeachMyAgent
[ "a8f71cbfce4cb8ca6da24d00ea690495e3afbd2e", "a8f71cbfce4cb8ca6da24d00ea690495e3afbd2e", "a8f71cbfce4cb8ca6da24d00ea690495e3afbd2e" ]
[ "TeachMyAgent/students/openai_baselines/ppo2/model.py", "TeachMyAgent/students/openai_baselines/common/plot_util.py", "TeachMyAgent/teachers/utils/torch.py" ]
[ "import tensorflow as tf\nimport functools\n\nfrom TeachMyAgent.students.openai_baselines.common.tf_util import get_session, save_variables, load_variables\nfrom TeachMyAgent.students.openai_baselines.common.tf_util import initialize\n\ntry:\n from TeachMyAgent.students.openai_baselines.common.mpi_adam_optimizer...
[ [ "tensorflow.exp", "tensorflow.trainable_variables", "tensorflow.abs", "tensorflow.train.AdamOptimizer", "tensorflow.global_variables_initializer", "tensorflow.variable_scope", "tensorflow.placeholder", "tensorflow.clip_by_value", "tensorflow.maximum", "tensorflow.clip_by_gl...
Shafaq-Siddiqi/systemml
[ "5cc523971854cdf4f22e6199987a86e213fae4e2" ]
[ "src/main/python/tests/frame/test_transform_apply.py" ]
[ "# -------------------------------------------------------------\n#\n# Licensed to the Apache Software Foundation (ASF) under one\n# or more contributor license agreements. See the NOTICE file\n# distributed with this work for additional information\n# regarding copyright ownership. The ASF licenses this file\n# ...
[ [ "numpy.isreal" ] ]
wenshuin/mkpy
[ "52d22b9bac50eede794bacd756869b1600b71ec0" ]
[ "mkpy/events.py" ]
[ "import re\nimport yaml\nimport h5py\nimport numpy as np\nimport pandas as pd\nfrom . import h5tools, mkh5\n\n\ndef read_excel_codemap(file, sheet_name=0):\n \"\"\"Read Excel .xlsx file, return codemap pandas DataFrame.\"\"\"\n\n codemap = pd.read_excel(file, sheet_name=sheet_name, index_col=\"Index\")\n i...
[ [ "pandas.DataFrame", "pandas.read_excel", "pandas.read_table", "pandas.concat" ] ]
sandialabs/slycat
[ "690e1cb07a6fa990d7206265e18edb22ae3f62e7" ]
[ "web-client/slycat/web/client/cca_random.py" ]
[ "#!/bin/env python\n# Copyright (c) 2013, 2018 National Technology and Engineering Solutions of Sandia, LLC . Under the terms of Contract\n# DE-NA0003525 with National Technology and Engineering Solutions of Sandia, LLC, the U.S. Government\n# retains certain rights in this software.\n\n\"\"\"Demonstrates uploading...
[ [ "numpy.random.seed", "numpy.random.normal" ] ]
ZhaoyangLyu/Point_Diffusion_Refinement
[ "9747265a5f141e5546fd4f862bfa66aa59f1bd33" ]
[ "pointnet2/models/pvd/modules/pointnet.py" ]
[ "import torch\nimport torch.nn as nn\n\nimport modules.functional as F\nfrom modules.ball_query import BallQuery\nfrom modules.shared_mlp import SharedMLP\n\n__all__ = ['PointNetAModule', 'PointNetSAModule', 'PointNetFPModule']\n\n\nclass PointNetAModule(nn.Module):\n def __init__(self, in_channels, out_channels...
[ [ "torch.cat", "torch.nn.ModuleList" ] ]
cabrittin/volumetric_analysis
[ "82004378abae963ef02858bf4711786dad76f133", "82004378abae963ef02858bf4711786dad76f133" ]
[ "scripts/varshney_hierarchy.py", "scripts/logistic_test.py" ]
[ "\"\"\"\nvarshney_hierarchy.py\n\n\n\n\n\"\"\"\n\nimport matplotlib.pyplot as plt\n\nfrom connectome.load import load_lite\nimport networks.hierarchy as hierarchy\nfrom figures.hierarchy import plot_varshney\nimport aux\n\nDB = 'N2U'\nGROUP = './mat/n2u_class_group.txt'\nREMOVE = './mat/n2u_remove.txt'\nTHRESH = 0....
[ [ "matplotlib.pyplot.show", "matplotlib.pyplot.subplots" ], [ "numpy.log", "numpy.zeros", "matplotlib.pyplot.savefig", "matplotlib.pyplot.subplots", "sklearn.linear_model.LogisticRegression", "numpy.ravel", "matplotlib.pyplot.tight_layout", "matplotlib.pyplot.show", "...
pawandeep2155/FixMatch-pytorch
[ "d86dc6d85d3d69518c100edb93b2fc13354191cb" ]
[ "train.py" ]
[ "import argparse\nimport logging\nimport math\nimport os\nimport random\nimport shutil\nimport time\nfrom collections import OrderedDict\n\nimport numpy as np\nimport torch\nimport torch.nn.functional as F\nimport torch.optim as optim\nfrom torch.optim.lr_scheduler import LambdaLR\nfrom torch.utils.data import Data...
[ [ "torch.distributed.get_world_size", "torch.cat", "numpy.mean", "torch.nn.functional.cross_entropy", "torch.load", "torch.distributed.init_process_group", "torch.manual_seed", "torch.utils.tensorboard.SummaryWriter", "torch.device", "torch.cuda.manual_seed_all", "torch.m...
sandutsar/jax
[ "409684f9c2d72a93b0d242afde79fc424ede5250" ]
[ "jax/_src/numpy/lax_numpy.py" ]
[ "# Copyright 2018 Google LLC\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# https://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed ...
[ [ "numpy.multiply", "numpy.sign", "numpy.where", "numpy.issubdtype", "numpy.broadcast_to", "numpy.dtype", "numpy.concatenate", "numpy.iscomplex", "numpy.uint8", "numpy.empty", "numpy.log", "numpy.arange", "numpy.ndim", "numpy.array", "numpy.delete", "n...
AlamiMejjati/controllable_image_synthesis
[ "06f81359d5f10854af275cd313023d9f1e0afd4c" ]
[ "controllable_gan/datasets.py" ]
[ "import os\nimport numpy as np\nimport torchvision\nfrom torchvision.datasets.vision import VisionDataset\nfrom PIL import Image\nimport glob\nfrom collections import Counter\n\n\nclass ObjectDataset(VisionDataset):\n \"\"\"\n Multiple data directories for varying number of objects per scene.\n Folder structure:...
[ [ "numpy.array", "numpy.random.choice", "numpy.sum", "numpy.any", "numpy.where", "numpy.expand_dims" ] ]
rgalhama/wordrep_cmcl2020
[ "074c268314f94f9eaa02b8a4352608a520447f42" ]
[ "src/evaluation/stats/corr_freq_aoa.py" ]
[ "import statsmodels.api as sm\nimport statsmodels.formula.api as smf\nimport pandas as pd\nimport numpy as np\nimport matplotlib.pyplot as plt\nimport seaborn as sns\nfrom scipy.stats import pearsonr\n\ndef plot_with_category(df, title):\n\n fig, ax = plt.subplots()\n sns.scatterplot(x=\"logfreq\", y=\"aoa\",...
[ [ "numpy.log", "pandas.merge", "matplotlib.pyplot.savefig", "matplotlib.pyplot.subplots", "numpy.eye", "scipy.stats.pearsonr", "pandas.read_csv" ] ]
ikervazquezlopez/Pylearn2
[ "2971e8f64374ffde572d4cf967aad5342beaf5e0", "2971e8f64374ffde572d4cf967aad5342beaf5e0", "2971e8f64374ffde572d4cf967aad5342beaf5e0", "2971e8f64374ffde572d4cf967aad5342beaf5e0" ]
[ "pylearn2/datasets/tests/test_cifar10.py", "pylearn2/train_extensions/window_flip.py", "pylearn2/costs/tests/test_term_1_0_l1_penalty.py", "pylearn2/expr/tests/test_probabilistic_max_pooling.py" ]
[ "import unittest\nimport numpy as np\nfrom pylearn2.datasets.cifar10 import CIFAR10\nfrom pylearn2.space import Conv2DSpace\nfrom pylearn2.testing.skip import skip_if_no_data\n\n\nclass TestCIFAR10(unittest.TestCase):\n\n def setUp(self):\n skip_if_no_data()\n self.test = CIFAR10(which_set='test')\...
[ [ "numpy.all" ], [ "numpy.zeros" ], [ "numpy.array" ], [ "numpy.random.RandomState", "numpy.allclose", "numpy.any", "numpy.abs", "numpy.all" ] ]
Chandy002/PySyncObj
[ "aeda3d264aef80e1310aacf770c696e53545b4bd" ]
[ "cs598_benchmarks/plot_cdf_latencies.py" ]
[ "import numpy as np\nimport matplotlib.pyplot as plt\nimport sys\nimport os\nimport json\n\ndef plot_cdf(directory):\n colors = ['#ffc406', 'green', 'blue', 'red']\n i = 0\n for file in os.listdir(directory):\n filename = os.fsdecode(file)\n filepath = os.path.join(directory, filename)\n ...
[ [ "numpy.histogram", "numpy.array", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.savefig", "matplotlib.pyplot.title", "matplotlib.pyplot.legend", "matplotlib.pyplot.ylim", "matplotlib.pyplot.ylabel", "numpy.append", "numpy.cumsum", "matplotlib.pyplot.axis" ] ]
Linzee/datacatalog-connectors-rdbms
[ "f66072732d3eaec8b982a4e389ba29947c5b6c3d" ]
[ "google-datacatalog-rdbms-connector/src/google/datacatalog_connectors/rdbms/scrape/metadata_scraper.py" ]
[ "#!/usr/bin/python\n#\n# Copyright 2020 Google LLC\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by app...
[ [ "pandas.DataFrame", "pandas.read_csv" ] ]
Mathiasn21/household_object_detection
[ "4c8a22070fae5e516bce4b704102ae42ae40c3b1" ]
[ "code/resize_images.py" ]
[ "import os\n\nimport cv2\n\nfrom tools.tools import load_json_data, load_image, save_json_data, load_config_file\nimport numpy as np\n\n\ndef calc_new_dimensions(max_size: int, width, height):\n \"\"\"\n Calculate new minimum dimensions and corresponding scalar\n :param max_size: int\n :param width: int...
[ [ "numpy.array" ] ]
rackerlabs/mlflow
[ "8607e630b77e139756923c7bf513ea6a300acd10" ]
[ "mlflow/pyfunc/scoring_server/__init__.py" ]
[ "\"\"\"\nScoring server for python model format.\nThe passed int model is expected to have function:\n predict(pandas.Dataframe) -> pandas.DataFrame\n\nInput, expected intext/csv or application/json format,\nis parsed into pandas.DataFrame and passed to the model.\n\nDefines two endpoints:\n /ping used for hea...
[ [ "numpy.array", "pandas.DataFrame", "pandas.read_json", "numpy.asscalar", "pandas.read_csv" ] ]
asfadmin/hyp3-geocode
[ "aaee8866b8ee0a27203d20e605ada6608f26a392" ]
[ "hyp3_geocode/sentinel.py" ]
[ "\"\"\"Geocode a sentinel-1 granule using Gamma software\"\"\"\n\nimport argparse\nimport datetime\nimport glob\nimport logging\nimport math\nimport os\nimport shutil\nimport zipfile\n\nimport numpy as np\nfrom hyp3lib.asf_geometry import geometry_geo2proj\nfrom hyp3lib.byteSigmaScale import byteSigmaScale\nfrom hy...
[ [ "numpy.reshape", "numpy.fromfile", "numpy.floor" ] ]
thu-spmi/semi-EBM
[ "393e3ea3566dd60c48872a5c573a335e8e802707", "393e3ea3566dd60c48872a5c573a335e8e802707" ]
[ "train/run_trf_pretrain.py", "hrf/trfx_semi.py" ]
[ "# Copyright 2020 Tsinghua University, Author: Yunfu Song\n# Apache 2.0.\n# This script contrains TRF unsupervised training experiments.\n\nimport tensorflow as tf\nimport numpy as np\nimport json\nimport os\n\nfrom base import *\nimport trf_uns, nce_net_uns\nimport argparse\n\npaser = argparse.ArgumentParser()\npa...
[ [ "tensorflow.set_random_seed", "tensorflow.ConfigProto", "tensorflow.get_default_graph", "numpy.random.seed" ], [ "numpy.concatenate", "numpy.array", "numpy.linalg.norm", "numpy.dot", "numpy.sum", "numpy.mean" ] ]
dineshrajdhanapathyDD/selenium-youtube-scraper-live
[ "a0f1f3278165e62a7cf7e26d5f8c099102ea7039" ]
[ "scraper.py" ]
[ "import pandas as pd\nfrom selenium import webdriver\nfrom selenium.webdriver.chrome.options import Options\nfrom selenium.webdriver.common.by import By\n\n\nYOUTUBE_TRENDING_URL = 'https://www.youtube.com/feed/trending'\n\n\ndef get_driver():\n chrome_options = Options()\n chrome_options.add_argument('--no-sandb...
[ [ "pandas.DataFrame" ] ]
ABohynDOE/mldoe
[ "0987df34a219b07488647ea3434e81cd07da9687" ]
[ "src/mldoe/design.py" ]
[ "# Packages\r\nfrom math import log2\r\nfrom mldoe.matrix import bmat, gmat\r\nfrom mldoe.wlp import wlp\r\nfrom itertools import chain\r\nimport oapackage as oa\r\nfrom typing import List\r\nimport numpy as np\r\n\r\n\r\nclass Design:\r\n \"\"\"\r\n Private meta-class for two-level design (TLD) and mixed-lev...
[ [ "numpy.concatenate", "numpy.count_nonzero", "numpy.dot", "numpy.zeros", "numpy.eye" ] ]
812610357/Optics
[ "713759a95f442f2f7f6efb75bbf15d5836029fac" ]
[ "FraunDiffraRecAper.py" ]
[ "import numpy as np\nimport matplotlib.pyplot as plt\nfrom math import pi\n\nLambda = 0.5\na = 20\nb = 20\nsintheta1 = np.linspace(-0.12, 0.12, 1201)\nsintheta2 = np.linspace(-0.12, 0.12, 1201)\n\nalpha = pi*a*sintheta1/Lambda\nbeta = pi*b*sintheta2/Lambda\nia = (np.sin(alpha)/alpha)**2\nib = (np.sin(beta)/beta)**2...
[ [ "numpy.sin", "numpy.dot", "numpy.zeros", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.plot", "matplotlib.pyplot.title", "matplotlib.pyplot.figure", "matplotlib.pyplot.ylabel", "numpy.sqrt", "matplotlib.pyplot.show", "numpy.linspace", "matplotlib.pyplot.subplot" ...
manoloesparta/stuff
[ "3cd3c5b6d76593ee3ccad9334f567b68853de9e1" ]
[ "poketsp/main.py" ]
[ "import numpy as np\nimport pandas as pd\n\n\ndef solve(adj):\n visited = {}\n \n start = adj.iloc[0]\n for index, row in adj.iterrows():\n print(\"INDEX: \", index)\n print(\"ROW: \", row)\n\n\ndef main():\n adj = pd.read_csv('adjacency.csv', index_col='compared')\n solve(adj)\n\n\n...
[ [ "pandas.read_csv" ] ]
dingdingdingyinyinyin/text-cnn
[ "652e69b01bfb6569fb282571d1e446f1087d1c1e" ]
[ "text_test.py" ]
[ "#encoding:utf-8\nfrom __future__ import print_function\nfrom text_model import *\nfrom loader import *\nfrom sklearn import metrics\nimport sys\nimport os\nimport time\nfrom datetime import timedelta\n\n\ndef evaluate(sess, x_, y_):\n data_len = len(x_)\n batch_eval = batch_iter(x_, y_, 128)\n total_loss ...
[ [ "sklearn.metrics.classification_report", "sklearn.metrics.confusion_matrix" ] ]
laurencer/recipes
[ "60b7c5f0304c7eb44a39295eba78da02608ae858" ]
[ "torchrecipes/core/base_train_app.py" ]
[ "# Copyright (c) Meta Platforms, Inc. and affiliates.\n#\n# This source code is licensed under the BSD-style license found in the\n# LICENSE file in the root directory of this source tree.\n\n\n#!/usr/bin/env python3\n\n# pyre-strict\n\nimport os\nimport time\nimport traceback\nfrom dataclasses import dataclass\nfr...
[ [ "torch._C._log_api_usage_once" ] ]
allenai/learning_from_interaction
[ "a266bc16d682832aa854348fa557a30d86b84674", "a266bc16d682832aa854348fa557a30d86b84674" ]
[ "source/models/poke_rcnn.py", "source/losses/fgbg_losses.py" ]
[ "import torch\nimport numpy as np\nfrom torch import nn\nfrom random import sample\nfrom detectron2.modeling.meta_arch.rcnn import GeneralizedRCNN\nfrom detectron2.modeling.postprocessing import detector_postprocess\nfrom detectron2.structures import Instances, Boxes, BitMasks\nfrom detectron2.utils.events import E...
[ [ "torch.zeros", "torch.cat", "torch.stack", "torch.no_grad", "torch.nn.BatchNorm2d", "torch.nn.ReLU", "numpy.any", "torch.nn.Conv2d", "torch.tensor", "torch.zeros_like", "torch.where" ], [ "torch.stack", "numpy.zeros" ] ]