repo_name
stringlengths
6
130
hexsha
list
file_path
list
code
list
apis
list
LiangYang666/mmfewshot
[ "ded7c357edcca29a84e61e6ce55ef9dff407d112" ]
[ "tests/test_detection_data/test_datasets/test_query_aware_dataset.py" ]
[ "# Copyright (c) OpenMMLab. All rights reserved.\nimport tempfile\n\nimport numpy as np\nfrom mmdet.apis import set_random_seed\n\nfrom mmfewshot.detection.datasets.builder import build_dataset\n\n\ndef test_query_aware_dataset():\n set_random_seed(0)\n data_config = {\n 'type': 'QueryAwareDataset',\n ...
[ [ "numpy.sum" ] ]
shikhar-srivastava/hover_net
[ "d4e8e129a4ad72f5d574a78c036449b496421529" ]
[ "misc/viz_utils.py" ]
[ "import cv2\nimport math\nimport random\nimport colorsys\nimport numpy as np\nimport itertools\nimport matplotlib.pyplot as plt\nfrom matplotlib import cm\n\nfrom .utils import get_bounding_box\n\n####\ndef colorize(ch, vmin, vmax):\n \"\"\"Will clamp value value outside the provided range to vmax and vmin.\"\"\...
[ [ "numpy.array", "numpy.asarray", "matplotlib.pyplot.get_cmap", "numpy.copy", "matplotlib.pyplot.subplots", "numpy.unique" ] ]
IsmaelElsharkawi/new_pororo_repo
[ "4617083b420615b8a3eb0f44d02e4e91a8f407f7", "4617083b420615b8a3eb0f44d02e4e91a8f407f7" ]
[ "dcsgan/layers.py", "mart/data_loader.py" ]
[ "import numpy as np\r\nimport torch\r\nimport torch.nn as nn\r\nimport torch.nn.functional as F\r\n \r\nclass DynamicFilterLayer(nn.Module): #MergeLayer\r\n def __init__(self, filter_size, stride=(1,1), pad=(0,0), flip_filters=False, grouping=False):\r\n super(DynamicFilterLayer, self).__init__()\r\n ...
[ [ "torch.cat", "torch.nn.functional.Conv2d", "torch.nn.functional.conv1d", "numpy.prod", "torch.nn.functional.conv2d", "torch.sum" ], [ "numpy.array", "torch.save", "numpy.load", "numpy.random.randn", "torch.nn.Upsample", "numpy.swapaxes", "numpy.random.randin...
MichaelSinsbeck/paper_hyperparameters-without-exploratory-phase
[ "50fee3aaee14748cb1970ae47ed7dc7ebd6098d5", "50fee3aaee14748cb1970ae47ed7dc7ebd6098d5" ]
[ "experiment 5/bbi/design.py", "experiment 4/04_1_computation.py" ]
[ "#!/usr/bin/env python3\n# -*- coding: utf-8 -*-\n\"\"\"\nModule sequentialDesign\nContains the following design methods (including some helper functions):\n 1) design_linearized - the normal sequential design as described in my paper\n If used with a FieldColleciton, becomes the linearized version\n 2...
[ [ "numpy.full", "numpy.array", "numpy.isnan", "numpy.random.choice", "numpy.zeros", "numpy.sum", "numpy.ones", "numpy.exp", "numpy.prod", "numpy.argmax", "numpy.arange", "numpy.abs", "numpy.sqrt", "numpy.average", "numpy.diag" ], [ "numpy.array", ...
zhengmidon/jingju_baseline
[ "4c6ef80ac14b4640efb1f81cde38df2ac35eacd2" ]
[ "uer/utils/adversarial.py" ]
[ "import torch\r\n\r\n\r\nclass FGM(object):\r\n \"\"\"\r\n refer to the paper: FGM(Fast Gradient Method)\r\n Adversarial training methods for semi-supervised text classification\r\n \"\"\"\r\n\r\n def __init__(self, model):\r\n self.model = model\r\n self.backup = {}\r\n\r\n def atta...
[ [ "torch.norm", "torch.isnan" ] ]
tonandr/ymc
[ "4d9db086d95fef21fed6891e987873c00539dbfe" ]
[ "src/space/ymc_opt.py" ]
[ "'''\nCreated on Dec. 1, 2018\n\n@author: Inwoo Chung (gutomitai@gmail.com)\n'''\n\nimport sys\nimport numpy as np\nimport os\nimport argparse\n\nimport pandas as pd\nimport time\n\nnum_iter = 1200\n\ndef calProposalDistVal(pre, cur, cov):\n '''\n Calculate a proposal distribution value.\n @param p...
[ [ "numpy.random.rand", "numpy.zeros", "pandas.DataFrame", "numpy.linalg.det", "numpy.identity", "numpy.random.multivariate_normal", "numpy.power", "numpy.abs", "pandas.read_csv", "numpy.linalg.inv" ] ]
surrealyz/DeepBayes
[ "b9d9e7a3708d1faf7aa918756619d99b0e71ae3e" ]
[ "models/conv_generator_cifar10_F.py" ]
[ "from __future__ import print_function\n\nimport numpy as np\nimport tensorflow as tf\nfrom mlp import mlp_layer\nfrom convnet import ConvNet, construct_filter_shapes\n\n\"\"\"\ngenerator p(z)p(x|z)p(y|z), GBZ\n\"\"\"\n \ndef deconv_layer(output_shape, filter_shape, activation, strides, name):\n scale = 1.0 / ...
[ [ "tensorflow.exp", "tensorflow.nn.relu", "tensorflow.random_uniform", "numpy.prod", "numpy.random.randint", "tensorflow.nn.conv2d_transpose", "tensorflow.nn.sigmoid", "tensorflow.split" ] ]
kduy/linde-intel-hackathon
[ "9e1ad5459a607a691b9d280e9b94e0cdf9c3c081" ]
[ "linde_make_features.py" ]
[ "import pandas as pd\nimport numpy as np\nimport os.path\nimport os\nimport argparse\n\nimport extractor\nfrom feeder import VarFeeder\nimport numba\nfrom typing import Tuple, Dict, Collection, List\n\nroot = '/mnt/md0/hackathon/'\ndef read_cached(name=\"linde_sample_5\") -> pd.DataFrame:\n \"\"\"\n Reads csv...
[ [ "pandas.isnull", "numpy.full", "pandas.read_pickle", "numpy.isnan", "numpy.empty", "pandas.DatetimeIndex", "pandas.Timedelta", "numpy.nan_to_num", "numpy.sin", "numpy.sum", "pandas.date_range", "numpy.mean", "pandas.DateOffset", "numpy.std", "numpy.cos",...
anguillanneuf/deep-reinforcement-learning
[ "9284bdfa2ba6cd136536ebd5d04e6c9fb9e492f8" ]
[ "p3_collab-compet/maddpg.py" ]
[ "import numpy as np\nimport torch\n\nfrom ddpg import DDPGAgent\nfrom utilities import soft_update, transpose_to_tensor, transpose_list\n\n\ndevice = torch.device(\"cuda\" if torch.cuda.is_available() else \"cpu\")\n\n\nclass MADDPG:\n \"\"\"policy + critic updates\"\"\"\n\n def __init__(self, discount_factor...
[ [ "torch.cat", "torch.no_grad", "torch.nn.SmoothL1Loss", "torch.cuda.is_available", "torch.tensor" ] ]
roguephysicist/PyPSD
[ "16f96c3d9df99835b3961751ef9ebceac791bb15" ]
[ "pypsd.py" ]
[ "'''\nusage: python pypsd.py [-h] -b BINSFILE -i INPUTFILE [-o OUTPUTDIR]\n\nA Python script for calculating the particle size distribution (PSD) of any\nsample. Please read the adjoining README.md file for more information.\n\nWritten by Sean M. Anderson and Liliana Villafana-Lopez.\n'''\n\nimport os\nimport argpa...
[ [ "matplotlib.pyplot.xlim", "numpy.cumsum", "numpy.bincount", "numpy.argmax", "numpy.arange", "numpy.sqrt", "matplotlib.pyplot.subplot", "numpy.array", "numpy.savetxt", "matplotlib.pyplot.xscale", "matplotlib.pyplot.title", "matplotlib.pyplot.figure", "numpy.loadt...
geekmj/fml
[ "ead2c16be7865eda03183b5e11622f64bf81cab7" ]
[ "python-programming/panda/accessing_elements_pandas_dataframes.py" ]
[ "import pandas as pd\n\nitems2 = [{'bikes': 20, 'pants': 30, 'watches': 35},\n {'watches': 10, 'glasses': 50, 'bikes':15,'pants': 5 } \n ]\nstore_items = pd.DataFrame(items2, index = ['Store 1', 'Store 2'])\n\nprint(store_items)\n\n## We can access rows, columns, or individual elements of the DataF...
[ [ "pandas.DataFrame" ] ]
DataXujing/CornerNet-Lite-Pytorch
[ "35d491b153c715d40174717ccafd89e77e33b743" ]
[ "trainmyData.py" ]
[ "#!/usr/bin/env python\nimport os\nimport sys\nimport json\nimport torch\nimport numpy as np\nimport queue\nimport pprint\nimport random\nimport argparse\nimport importlib\nimport threading\nimport traceback\nimport torch.distributed as dist\nimport torch.multiprocessing as mp\n\nfrom tqdm import tqdm\nfrom torch.m...
[ [ "torch.multiprocessing.Process", "torch.distributed.init_process_group", "torch.multiprocessing.spawn", "torch.cuda.device_count", "torch.multiprocessing.Queue" ] ]
ori-drs/whole_body_state_msgs
[ "1c1dd3395907c344d94515ff4f10a6a06ff30abb" ]
[ "src/whole_body_state_msgs/whole_body_interface.py" ]
[ "from __future__ import print_function, absolute_import\n\nimport rospy\nfrom whole_body_state_msgs.msg import WholeBodyState, ContactState, JointState\nimport pinocchio\nimport numpy as np\nimport copy\n\n__all__ = ['WholeBodyStateInterface']\n\n\nclass WholeBodyStateInterface():\n def __init__(self, model, fra...
[ [ "numpy.array", "numpy.zeros" ] ]
NanYoMy/mmregnet
[ "50909d39289733264dce14666e9deeecbe858819" ]
[ "proj/voxelmorph/torch_vm/losses.py" ]
[ "import torch\nimport torch.nn.functional as F\nimport numpy as np\nimport math\n\n\nclass NCC:\n \"\"\"\n Local (over window) normalized cross correlation loss.\n \"\"\"\n\n def __init__(self, win=None):\n self.win = win\n\n def loss(self, y_true, y_pred):\n\n I = y_true\n J = y...
[ [ "torch.abs", "numpy.prod", "torch.mean", "torch.ones" ] ]
runjerry/alf
[ "38a3621337a030f74bb3944d7695e7642e777e10" ]
[ "alf/algorithms/one_step_loss.py" ]
[ "# Copyright (c) 2019 Horizon Robotics. All Rights Reserved.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless requi...
[ [ "tensorflow.reduce_mean", "tensorflow.stop_gradient" ] ]
mounalab/Multivariate-time-series-forecasting-keras
[ "c9551cf3b88aa5b4257206fb5096716df648d93d" ]
[ "Transformer.py" ]
[ "from datetime import datetime\nfrom time import time\nimport json\nimport logging\n\nimport tensorflow as tf\nimport keras\nfrom keras import layers\nfrom keras.models import Model\nfrom keras.models import load_model\nfrom keras.models import Sequential\nfrom keras.callbacks import EarlyStopping, TensorBoard, Mod...
[ [ "tensorflow.keras.optimizers.Adam" ] ]
tansyab1/PhD-project
[ "b4815d151ef90cffa1bbc8fbf97cd091a20ce600" ]
[ "2021/src/Classification/Pre-Trained-DenseNet-161/02_medico_2018_method_3_densenet161_split_1.py" ]
[ "# # Developer: Vajira Thambawita\n# # Last modified date: 18/07/2018\n# # ##################################\n\n# # Description ##################\n# # pythroch resnet18 training\n\n\n\n\n\n\n###########################################\n\nfrom __future__ import print_function, division\n\nimport datetime\n\n#...
[ [ "torch.utils.data.ConcatDataset", "torch.nn.Linear", "sklearn.metrics.confusion_matrix", "torch.cat", "numpy.set_printoptions", "torch.cuda.is_available", "matplotlib.pyplot.gcf", "torch.load", "sklearn.metrics.f1_score", "torch.nn.CrossEntropyLoss", "matplotlib.pyplot....
dnadlinger/numba
[ "0d1d778471afd930915d1b0aba1997ddabee5be4" ]
[ "numba/tests/test_array_methods.py" ]
[ "from itertools import product, cycle, permutations\nimport sys\nimport warnings\n\nimport numpy as np\n\nfrom numba import jit, typeof\nfrom numba.core import types\nfrom numba.core.compiler import compile_isolated\nfrom numba.core.errors import TypingError, LoweringError\nfrom numba.np.numpy_support import as_dty...
[ [ "numpy.testing.assert_allclose", "numpy.int8", "numpy.copy", "numpy.asfortranarray", "numpy.mean", "numpy.where", "numpy.frombuffer", "numpy.imag", "numpy.random.random", "numpy.dtype", "numpy.int16", "numpy.zeros_like", "numpy.nonzero", "numpy.arange", ...
nacansino/DiscreteTimeVaryingFilter
[ "16f19729dd85cceb25e1f4a382533b0947f584c3" ]
[ "discrete-time-varying-filter/gaussian_fitness_fxn.py" ]
[ "#!/usr/bin/env python3\n# -*- coding: utf-8 -*-\n\"\"\"\nCreated on Mon Apr 29 16:15:38 2019\n\n@author: jay\n\nCreation of Gaussian fitness function\n\"\"\"\n\nimport numpy as np\n\ntx=np.arange(0,1,0.01)\nty=np.arange(-0.5,0.5,0.00001)\n\nsx=0.4\nsy=0.3\n\nx,y = np.meshgrid(tx,ty,sparse=True)\ngauss=100*np.exp(-...
[ [ "numpy.meshgrid", "numpy.arange", "numpy.exp" ] ]
Haelles/QueryTrack
[ "ea3e5c964788231926a393ba691aa2db7974102c" ]
[ "mmdet/models/roi_heads/mask_heads/dynamic_mask_head.py" ]
[ "import torch\nimport torch.nn as nn\nfrom mmcv import imresize\nfrom mmcv.cnn import (bias_init_with_prob, build_activation_layer,\n build_norm_layer, ConvModule, Conv2d, build_upsample_layer)\nfrom mmcv.runner import auto_fp16, force_fp32\n\nfrom mmdet.core import mask_target\nfrom mmdet.mode...
[ [ "torch.nn.init.xavier_uniform_", "torch.arange", "torch.nn.init.constant_" ] ]
klebster2/inversion_mapping_dissertation
[ "568a043086207d1170410068213179b437b26e80" ]
[ "model1c.py" ]
[ "#!/usr/bin/env python3\n# -*- coding: utf-8 -*-\n\"\"\"\nCreated by Kleber Noel for disseration: \n inversion mapping using a Local Linear embedding\nJune 2019\n\"\"\"\nimport numpy as np \n#import pandas as pd \nimport os, pdb, argparse, re, random\nfrom tqdm import tqdm\nfrom collections import defaultdict, O...
[ [ "torch.nn.Linear", "torch.mul", "torch.nn.LSTM", "torch.nn.MSELoss", "torch.autograd.Variable", "torch.nn.utils.rnn.pad_sequence", "torch.FloatTensor", "torch.cuda.is_available", "torch.nn.utils.rnn.pad_packed_sequence", "torch.load", "torch.empty", "torch.randn" ...
zzzqzhou/Dual-Normalization
[ "b9831b6e2662a950600ba37ada087ba8ce93f60c" ]
[ "utils/loss.py" ]
[ "import torch\nimport torch.nn.functional as F\n\neps = 1e-8\n\ndef dice_loss(input, target, p=2, ignore_index=-100):\n n, c, h, w = input.size()\n prob = F.softmax(input, dim=1)\n prob_flatten = prob.permute(0, 2, 3, 1).contiguous().view(-1, c)\n\n target_flatten = target.view(n * h * w, 1)\n mask =...
[ [ "torch.nn.functional.one_hot", "torch.mul", "torch.nn.functional.softmax", "torch.zeros_like", "torch.sum" ] ]
veui/yolo-tf2-py37
[ "10b841bcb8403c4388f7b877338c7268041cf95e" ]
[ "yolo_tf2/core/evaluator.py" ]
[ "import os\nfrom concurrent.futures import ThreadPoolExecutor, as_completed\n\nimport numpy as np\nimport pandas as pd\nimport tensorflow as tf\nfrom cv2 import cv2\nfrom yolo_tf2.core.models import BaseModel\nfrom yolo_tf2.utils.common import (LOGGER, get_abs_path, get_detection_data,\n ...
[ [ "tensorflow.data.TFRecordDataset", "pandas.set_option", "tensorflow.expand_dims", "pandas.DataFrame", "numpy.random.default_rng", "pandas.concat", "numpy.isin" ] ]
jonathanvoelkle/twemoji
[ "af7d3779ed7ceb18dbd1543f3d1efd69e573703b" ]
[ "main.py" ]
[ "import os\n\nfrom collections import Counter\n\nimport numpy as np\nimport matplotlib.pyplot as plt\nfrom matplotlib.patches import Rectangle\n\nfrom matplotlib import image as mpimg\n\nimport statistics\n\n\n# 2194\n\n\ndef getColors(img):\n pixels = img.reshape((72*72, 4)) .tolist()\n\n # filter pixels fo...
[ [ "numpy.array", "matplotlib.pyplot.xlim", "numpy.median", "matplotlib.pyplot.ylim", "matplotlib.pyplot.subplots", "numpy.mean", "matplotlib.pyplot.show", "matplotlib.patches.Rectangle" ] ]
asinghgaba/PyBaMM
[ "2f51eaacbbc6b264fb376a6cef33ff91e99b9f49", "2f51eaacbbc6b264fb376a6cef33ff91e99b9f49" ]
[ "pybamm/parameters/parameter_values.py", "pybamm/solvers/base_solver.py" ]
[ "#\n# Dimensional and dimensionless parameter values, and scales\n#\nimport pybamm\nimport pandas as pd\nimport os\nimport numbers\nimport warnings\nfrom pprint import pformat\nfrom collections import defaultdict\n\n\nclass ParameterValues:\n \"\"\"\n The parameter values for a simulation.\n\n Note that th...
[ [ "pandas.DataFrame", "pandas.read_csv" ], [ "numpy.array", "numpy.zeros", "numpy.diff", "numpy.arange", "numpy.searchsorted", "numpy.linspace", "numpy.insert" ] ]
xiayzh/MH-MDGM
[ "203fb463ac968d1c566073111ff42ca55e7ea085", "203fb463ac968d1c566073111ff42ca55e7ea085", "203fb463ac968d1c566073111ff42ca55e7ea085" ]
[ "inversion/Channel/simulation.py", "inversion/Gaussian/inversion_16_64.py", "MDGM/Channel/VAE_train_16.py" ]
[ "from dolfin import *\nimport matplotlib.pyplot as plt\nimport fenics\nimport numpy as np\nimport os\nimport property_field as property_field\nimport scipy.misc as misc\nimport scipy.io\nimport scenarios as scenarios\nfrom matplotlib import ticker,cm\nimport time\n\n\nclass simulation:\n def __init__(self):\n ...
[ [ "numpy.full", "numpy.random.normal", "numpy.savetxt", "numpy.log", "numpy.zeros", "matplotlib.pyplot.savefig", "numpy.copy", "matplotlib.pyplot.close", "matplotlib.pyplot.subplots", "numpy.loadtxt", "numpy.amax", "numpy.abs", "numpy.amin", "matplotlib.ticker...
moloney/nipype
[ "a7a9c85c79cb1412ba03406074f83200447ef50b" ]
[ "nipype/workflows/rsfmri/fsl/tests/test_resting.py" ]
[ "# emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil -*-\n# vi: set ft=python sts=4 ts=4 sw=4 et:\n\nimport pytest\nimport os\nimport mock\nimport numpy as np\n\nfrom .....testing import utils\nfrom .....interfaces import IdentityInterface\nfrom .....pipeline.engine import Node, Workflow\n\nfrom ....
[ [ "numpy.array", "numpy.zeros" ] ]
er1ca/Gesture-Generation-from-Trimodal-Context
[ "6d988a7211a4d8294e1ef4b45c45ee25d12455d2", "6d988a7211a4d8294e1ef4b45c45ee25d12455d2" ]
[ "scripts/utils/data_utils.py", "scripts/train_eval/train_seq2seq.py" ]
[ "import re\n\nimport librosa\nimport numpy as np\nimport torch\nfrom scipy.interpolate import interp1d\nfrom sklearn.preprocessing import normalize\n\ndevice = torch.device(\"cuda:0\" if torch.cuda.is_available() else \"cpu\")\n\n\nskeleton_line_pairs = [(0, 1, 'b'), (1, 2, 'darkred'), (2, 3, 'r'), (3, 4, 'orange')...
[ [ "numpy.array", "scipy.interpolate.interp1d", "numpy.pad", "numpy.zeros", "torch.cuda.is_available", "numpy.arange", "sklearn.preprocessing.normalize" ], [ "torch.nn.functional.mse_loss", "torch.norm", "torch.stack", "torch.sum" ] ]
ljrprocc/Motif-Removal
[ "8979ca91398212248a2be61345c99bdec53ae37e" ]
[ "networks/unet_components.py" ]
[ "import torch\nimport torch.nn as nn\nimport torch.nn.functional as f\n\n\ndef weight_init(m):\n if isinstance(m, nn.Conv2d):\n nn.init.xavier_normal_(m.weight)\n nn.init.constant_(m.bias, 0)\n\n\ndef reset_params(model):\n for i, m in enumerate(model.modules()):\n weight_init(m)\n\n\ndef...
[ [ "torch.cat", "torch.nn.ModuleList", "torch.nn.init.constant_", "torch.nn.MaxPool2d", "torch.nn.BatchNorm2d", "torch.nn.ConvTranspose2d", "torch.nn.ReLU", "torch.nn.Upsample", "torch.nn.Conv2d", "torch.nn.functional.relu", "torch.nn.init.xavier_normal_" ] ]
cseed/hail
[ "425e779c0bde619bcf96838c09cc834de3c182fd" ]
[ "hail/python/test/hail/expr/test_ndarrays.py" ]
[ "import numpy as np\nfrom ..helpers import *\nimport tempfile\nimport pytest\n\nfrom hail.utils.java import FatalError, HailUserError\n\n\ndef assert_ndarrays(asserter, exprs_and_expecteds):\n exprs, expecteds = zip(*exprs_and_expecteds)\n\n expr_tuple = hl.tuple(exprs)\n evaled_exprs = hl.eval(expr_tuple)...
[ [ "numpy.array_equal", "numpy.asfortranarray", "numpy.load", "numpy.linalg.qr", "numpy.concatenate", "numpy.full", "numpy.linalg.matrix_rank", "numpy.eye", "numpy.testing.assert_array_almost_equal", "numpy.arange", "numpy.linalg.inv", "numpy.vstack", "numpy.array"...
Open-Speech-EkStep/ekstep-gender-classification
[ "7af5b5c24c6a7d37dc84afbaf76efcaf38e941e5" ]
[ "tests/test_create_embeddings.py" ]
[ "import unittest\nfrom scripts.create_embeddings import encoder\nfrom os import path\nfrom glob import glob\nimport numpy as np\n\n\nclass EmbeddingsTests(unittest.TestCase):\n def test_should_create_embeddings_for_clean_test_files(self):\n source_dir = '../resources/test_data/'\n source_dir_patter...
[ [ "numpy.load" ] ]
nbokulich/genome-sampler
[ "5a37b74fcb21cdaf2c7a437f015eda14ce02590d" ]
[ "genome_sampler/subsample_diversity.py" ]
[ "import tempfile\n\nimport pandas as pd\n\nimport qiime2\nfrom q2_types.feature_data import DNAFASTAFormat\n\nfrom genome_sampler.common import IDSelection, run_command, ids_from_fasta\n\n\n# According to the vsearch 2.14.2 documentation, percent_id is defined as:\n# (matching columns) / (alignment length - termin...
[ [ "pandas.read_csv", "pandas.Index", "pandas.Series" ] ]
Powahowa/CSML1020-Project---UrbanSound-8K
[ "94c44f453aa275471e3d951bdbe72ec5e4bc878f" ]
[ "data-exploration_parallel.py" ]
[ "# %% [markdown] \n# # Data Exploration\n\n# ## Imports\nimport pandas as pd\nimport matplotlib.pyplot as plt\nimport seaborn as sns\nimport librosa\n\n# Import custom module containing useful functions\nimport sonicboom\n\n# Parallelization libraries\nfrom joblib import Parallel, delayed\n\n# %% [markdown]\n# ## R...
[ [ "matplotlib.pyplot.xlabel", "matplotlib.pyplot.title", "matplotlib.pyplot.figure", "matplotlib.pyplot.tight_layout", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.style.use", "matplotlib.pyplot.specgram", "matplotlib.pyplot.show", "matplotlib.pyplot.subplot" ] ]
lhmtriet/DeepCVA
[ "92c352a0ae11fc7d69497308f690dcca73eb50b0" ]
[ "infer_features/infer_features_ast.py" ]
[ "import sys\n\nsys.path.append(\"../\")\nimport helpers.feature_model_helpers as fmh\nimport pandas as pd\nimport pickle\nfrom gensim.models import Word2Vec\nfrom importlib import reload\nfrom pathlib import Path\nimport pickle as pkl\nimport numpy as np\nfrom scipy.sparse import coo_matrix\n\nreload(fmh)\n\n# %% G...
[ [ "scipy.sparse.coo_matrix" ] ]
ezanardi/phonopy
[ "ea701805638113e697b0f1743c5ab8eaaa15dceb" ]
[ "phonopy/unfolding/core.py" ]
[ "# Copyright (C) 2015 Atsushi Togo\n# All rights reserved.\n#\n# This file is part of phonopy.\n#\n# Redistribution and use in source and binary forms, with or without\n# modification, are permitted provided that the following conditions\n# are met:\n#\n# * Redistributions of source code must retain the above copyr...
[ [ "numpy.array", "numpy.dot", "numpy.zeros", "numpy.rint", "numpy.linalg.inv", "numpy.where", "numpy.abs", "numpy.repeat", "numpy.diag", "numpy.dtype" ] ]
LinacCoherentLightSource/psgeom
[ "1c31208d861755fc76074c1032ec24d0058a96bf" ]
[ "test/test_reciprocal.py" ]
[ "# --- reciprocal.py -----------------------------------------------------------\n# + basisgrid.py\n\nimport numpy as np\nimport os\nimport unittest\nimport h5py\n\nfrom psgeom import basisgrid\nfrom psgeom import reciprocal\nfrom psgeom import camera\nfrom psgeom import sensors\nfrom psgeom import fitting\n\n\nd...
[ [ "numpy.max", "numpy.testing.assert_allclose", "numpy.array", "numpy.linalg.norm", "numpy.sin", "numpy.zeros", "numpy.squeeze", "numpy.testing.assert_almost_equal", "numpy.random.randn", "numpy.logical_and", "numpy.testing.assert_array_almost_equal", "numpy.arange", ...
226wyj/R-BERT
[ "c94daf7b72b2d70f7883f9e646825ab1a6c149a1" ]
[ "utils.py" ]
[ "import sys\nsys.path.append('.')\n\nimport os\nimport random\nimport logging\nimport collections\nimport csv\nfrom copy import deepcopy\n\nimport torch\nimport numpy as np\nfrom sklearn.metrics import f1_score\nfrom transformers.tokenization_bert import BertTokenizer\n\nimport matplotlib\nmatplotlib.use('TkAgg')\n...
[ [ "matplotlib.use", "torch.cuda.manual_seed_all", "numpy.zeros", "numpy.random.seed", "pandas.DataFrame", "torch.manual_seed", "numpy.loadtxt", "torch.cuda.is_available", "matplotlib.pyplot.show", "sklearn.metrics.f1_score" ] ]
Kirndohyeon/deeplearning_from_scratch
[ "4bbb640b42bddc136abd88b8caa66e874b8a1935" ]
[ "ch7.CNN/simple_convnet.py" ]
[ "# coding: utf-8\nimport sys, os\nsys.path.append(os.pardir) # 부모 디렉터리의 파일을 가져올 수 있도록 설정\nimport pickle\nimport numpy as np\nfrom collections import OrderedDict\nfrom common.layers import *\nfrom common.gradient import numerical_gradient\n\n\nclass SimpleConvNet:\n \"\"\"단순한 합성곱 신경망\n \n conv - relu - poo...
[ [ "numpy.sum", "numpy.random.randn", "numpy.argmax", "numpy.zeros" ] ]
dlsaavedra/Detector_GDXray
[ "1e120f8fa548819eef1b86ccfbbe306b44405b6f" ]
[ "keras-yolo2-master/frontend.py" ]
[ "from keras.models import Model\nfrom keras.layers import Reshape, Activation, Conv2D, Input, MaxPooling2D, BatchNormalization, Flatten, Dense, Lambda\nfrom keras.layers.advanced_activations import LeakyReLU\nimport tensorflow as tf\nimport numpy as np\nimport os\nimport cv2\nfrom utils import decode_netout, comput...
[ [ "tensorflow.exp", "tensorflow.ones_like", "tensorflow.assign_add", "numpy.finfo", "tensorflow.to_float", "numpy.cumsum", "numpy.random.normal", "tensorflow.shape", "tensorflow.concat", "tensorflow.less", "tensorflow.sigmoid", "tensorflow.argmax", "tensorflow.Var...
Doodleverse/Segmentation_Gym
[ "df8818b70b650d6390e5b70db2cdd65837a7d474" ]
[ "make_nd_dataset.py" ]
[ "# Written by Dr Daniel Buscombe, Marda Science LLC\n# for the USGS Coastal Change Hazards Program\n#\n# MIT License\n#\n# Copyright (c) 2020-22, Marda Science LLC\n#\n# Permission is hereby granted, free of charge, to any person obtaining a copy\n# of this software and associated documentation files (the \"Softwar...
[ [ "numpy.full", "numpy.array", "numpy.zeros", "numpy.round", "numpy.ones", "numpy.savez_compressed", "numpy.all", "numpy.unique", "numpy.arange", "numpy.dstack", "numpy.squeeze", "numpy.vstack", "numpy.maximum" ] ]
gitter-badger/scvi-tools
[ "8948405f6b393baede73ccd6a0a5ac0824e16c0d" ]
[ "scvi/utils/_differential.py" ]
[ "import inspect\nimport logging\nimport warnings\nfrom typing import Callable, Dict, List, Optional, Sequence, Union\n\nimport numpy as np\nimport pandas as pd\nimport torch\n\nfrom scvi._compat import Literal\n\nlogger = logging.getLogger(__name__)\n\nNumber = Union[int, float]\n\n\nclass DifferentialComputation:\...
[ [ "numpy.concatenate", "numpy.array", "numpy.random.choice", "numpy.asarray", "numpy.argmin", "numpy.log", "numpy.median", "torch.no_grad", "numpy.mean", "numpy.where", "numpy.arange", "numpy.sort", "numpy.abs", "pandas.ExcelWriter", "numpy.log2", "num...
HiteshMah-Jan/Quantdom
[ "e05304006d3805f941d5f1033135730287b447e6" ]
[ "quantdom/lib/portfolio.py" ]
[ "\"\"\"Portfolio.\"\"\"\n\nimport itertools\nfrom contextlib import contextmanager\nfrom enum import Enum, auto\n\nimport numpy as np\n\nfrom .base import Quotes\nfrom .performance import BriefPerformance, Performance, Stats\nfrom .utils import fromtimestamp, timeit\n\n__all__ = ('Portfolio', 'Position', 'Order')\n...
[ [ "numpy.zeros_like", "numpy.sum", "numpy.maximum.accumulate", "numpy.where", "numpy.cumsum" ] ]
JishinMaster/scientific_benchmarks
[ "1ec81d2475a857fbb81474036af98080b5c1875e" ]
[ "tests/resources/covmat_test_data.py" ]
[ "import numpy as np\n\nnp.random.seed(0)\n\ndef generate(size):\n (m_real, m_imag) = np.random.randn(size, size), np.random.randn(size, size)\n\n m_complex = m_real + 1j * m_imag\n\n m_covmat = np.cov(m_complex)\n\n output_file_name = \"tests/resources/data/testcovmat_sp_out_{}_{}\".format(size, size)\n...
[ [ "numpy.cov", "numpy.random.seed", "numpy.random.randn", "numpy.real", "numpy.imag" ] ]
AntixK/PyTorch-Model-Compare
[ "869d3ecd0b9a0b9ceca51f84f4eedcce1fdd392f" ]
[ "torch_cka/utils.py" ]
[ "from mpl_toolkits import axes_grid1\nimport matplotlib.pyplot as plt\n\ndef add_colorbar(im, aspect=10, pad_fraction=0.5, **kwargs):\n \"\"\"Add a vertical color bar to an image plot.\"\"\"\n divider = axes_grid1.make_axes_locatable(im.axes)\n width = axes_grid1.axes_size.AxesY(im.axes, aspect=1./aspect)\...
[ [ "matplotlib.pyplot.gca", "matplotlib.pyplot.sca" ] ]
jorgemauricio/get_forecast_from_conagua
[ "7124041cd061134feb37afa11e70aabd68495153" ]
[ "algoritmo_diario.py" ]
[ "# /usr/bin/env python3\n# -*- coding: utf-8 -*-\n\"\"\"\n# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #\n# Script que permite insertar el pronóstico de CONAGUA a una base de datos\n# Author: Jorge Mauricio\n# Email: jorge.ernesto.mauricio@gmail.com\n# Date: Created on Thu...
[ [ "pandas.to_datetime" ] ]
alanoooaao/FoolNLTK
[ "1344c5aa1c2aabc1f4f6f2a492e1663928836325" ]
[ "train/export_model.py" ]
[ "#!/usr/bin/env python\n#-*-coding:utf-8-*-\n\n\nimport tensorflow as tf\nfrom tensorflow.contrib.crf import viterbi_decode\nimport numpy as np\n\ndef decode(logits, trans, sequence_lengths, tag_num):\n viterbi_sequences = []\n small = -1000.0\n start = np.asarray([[small] * tag_num + [0]])\n for logit,...
[ [ "numpy.concatenate", "numpy.array", "tensorflow.train.latest_checkpoint", "numpy.asarray", "tensorflow.get_default_graph", "tensorflow.contrib.crf.viterbi_decode", "tensorflow.Graph", "tensorflow.Session", "tensorflow.GraphDef", "tensorflow.import_graph_def", "numpy.one...
fixedchaos/delfem2
[ "c8a7a000ec6a51c44bc45bc6ad0d0106d9315ade" ]
[ "test_py/test_fem.py" ]
[ "####################################################################\n# Copyright (c) 2019 Nobuyuki Umetani #\n# #\n# This source code is licensed under the MIT license found in the #\n# LICENSE file in the root director...
[ [ "numpy.where", "numpy.array", "numpy.random.uniform", "numpy.zeros" ] ]
gregbugaj/marie-ai
[ "f51a74f19ab5d7231c9f8a426284feff1671b974" ]
[ "src/models/icr/test.py" ]
[ "import argparse\nimport os\nimport re\nimport string\nimport time\n\nimport numpy as np\nimport torch\nimport torch.backends.cudnn as cudnn\nimport torch.nn.functional as F\nimport torch.utils.data\nfrom nltk.metrics.distance import edit_distance\n\nfrom dataset import AlignCollate, hierarchical_dataset\nfrom mode...
[ [ "torch.IntTensor", "torch.no_grad", "torch.nn.CTCLoss", "torch.cuda.device_count", "torch.cuda.is_available", "torch.LongTensor", "torch.load", "torch.nn.functional.softmax", "torch.nn.CrossEntropyLoss", "torch.nn.DataParallel" ] ]
dojoteef/storium-gpt2
[ "ce8e3fa330b203068e9572417c8f40366ca131d5" ]
[ "dae/world_vis.py" ]
[ "import sys\n\nprint(sys.path)\n# import matplotlib\n# import matplotlib.pyplot as plt\nimport random\nimport torch\nfrom torch import nn, optim\nfrom torch.autograd import Function\nimport numpy as np\nimport os\nimport pickle\nimport data_analysis_utils\nfrom data_analysis_utils import (prepare_text_for_lda, buil...
[ [ "numpy.delete", "numpy.zeros", "numpy.sum", "numpy.where", "numpy.argsort", "numpy.around" ] ]
Jimmy-INL/jax
[ "ef4debcaad5a5ac5182899e385f45ca64f5ce600" ]
[ "jax/lib/xla_bridge.py" ]
[ "# Copyright 2018 Google LLC\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# https://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed ...
[ [ "numpy.equal", "numpy.array", "numpy.not_equal", "numpy.take", "numpy.isscalar" ] ]
jbsantos/api-grafico
[ "42f98cafecd9fc9e04292e99e15b44c400c86e8c" ]
[ "treinamento.py" ]
[ "from sklearn.cluster import KMeans\n\ndef objGrafico():\n import numpy as np\n import json\n\n class NumpyEncoder(json.JSONEncoder):\n def default(self, obj):\n if isinstance(obj, np.ndarray):\n return obj.tolist()\n return json.JSONEncoder.default(self, obj)\n\...
[ [ "pandas.DataFrame", "sklearn.cluster.KMeans", "matplotlib.pyplot.title", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.legend", "matplotlib.pyplot.savefig", "matplotlib.pyplot.close", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.scatter", "pandas.read_csv" ] ]
Mriana-Yadkoo/Plutinos32-Fall2020
[ "6e5678275ff5439c32e1140f55e99c590b308b1b" ]
[ "ReboundCode.py" ]
[ "# ---- Author/Instructor: Samantha Lawler ---- #\n# ---- CoAuthor/Student: Mriana Yadkoo ---- #\n# ---- Student Email: mriana.saeed1997@gmail.com / May99@uregina.ca ---- #\n# ---- Copyrights: Fall 2020 ---- #\n\n# Used Modulars\nimport numpy as np\nimport rebound\nimport sys\n\n# Conversion tools\ndeg2rad = np.pi/...
[ [ "numpy.linspace", "numpy.arange" ] ]
howieraem/KinectActionDetection
[ "ff64030e9fa2eb3d512b5cc1dae79e6a07ab8e5c" ]
[ "utils/pytorch.py" ]
[ "import torch\nimport copy\nfrom utils.misc import deprecated\n\n\ndef unprocessed_collate(batch):\n \"\"\"\n A dummy function to prevent Pytorch's data loader from converting and stacking batch data.\n :param batch:\n :return:\n \"\"\"\n return batch # List of data tuples (sequence, timeline, ...
[ [ "torch.zeros", "torch.LongTensor", "torch.clamp", "torch.pow" ] ]
pySTEPS/pySTEPS
[ "99c79d8dd10ec9e0b61b59eb9f2b3ff73d0ed0df" ]
[ "pysteps/scripts/run_vel_pert_analysis.py" ]
[ "# -*- coding: utf-8 -*-\n\"\"\"Analyze uncertainty of motion field with increasing lead time. The analyses\nare done by comparing initial motion fields to those estimated in the future.\nFor a description of the method, see :cite:`BPS2006`.\"\"\"\n\nimport argparse\nfrom datetime import datetime, timedelta\nimport...
[ [ "numpy.linalg.norm", "numpy.sum", "numpy.ones", "numpy.any", "numpy.stack", "numpy.isfinite", "scipy.linalg.norm" ] ]
OH-Seoyoung/People_Counter_using_Object_Detection
[ "ec0e75ea4a820466d1e98b842731fe21221b59ea" ]
[ "YOLO-v3_test/yolo_opencv.py" ]
[ "import cv2\nimport argparse\nimport numpy as np\n\nap = argparse.ArgumentParser()\nap.add_argument('-i', '--image', required=True,\n help = 'path to input image')\nap.add_argument('-c', '--config', required=True,\n help = 'path to yolo config file')\nap.add_argument('-w', '--weights',...
[ [ "numpy.argmax" ] ]
darsh8200/tensorflow
[ "a21ecf40d7be6b877e673f6360cda3dfc70ef6ff" ]
[ "tensorflow/python/keras/engine/training_v2_utils.py" ]
[ "# Copyright 2019 The TensorFlow Authors. All Rights Reserved.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless requ...
[ [ "tensorflow.python.keras.engine.training_utils.cast_to_model_input_dtypes", "tensorflow.python.framework.tensor_util.constant_value", "tensorflow.python.ops.math_ops.cast", "tensorflow.python.keras.engine.training_utils.ModelInputs", "tensorflow.python.keras.distribute.distributed_training_uti...
lutsker/simple-autodiff
[ "3eaecbae7e46566a51f12c923d72af305d39b4ee" ]
[ "autodiff/ops.py" ]
[ "from .numtor import Numtor\nimport numpy as np\n\n\ndef np_exp(arg: Numtor):\n return Numtor(np.exp(arg.value), op='exp', parents=[arg])\n\ndef np_log(arg: Numtor):\n return Numtor(np.log(arg.value), op='log', parents=[arg])\n\ndef np_sigmoid(arg: Numtor):\n return Numtor(1/(1+np.exp(-arg.value)), op='sig...
[ [ "numpy.exp", "numpy.log" ] ]
pthomson88/drug_design
[ "d92ed4c06cd036c83fe60ada05b493f4581d24d6" ]
[ "drug_design/similarity.py" ]
[ "\n#this approach was taken from: https://stackabuse.com/levenshtein-distance-and-text-similarity-in-python/\nimport numpy as np\nimport pandas as pd\nimport pathos.multiprocessing as mp\nfrom functools import partial\nfrom itertools import repeat, starmap\nimport settings\nimport datetime\n\ndef parallelize_datafr...
[ [ "pandas.Series" ] ]
diffiii/DF8
[ "bd4ef60944a39fedef222c98e27ec61269278cdc" ]
[ "DF8.py" ]
[ "import time\nimport numpy as np\nfrom typing import Literal, Optional\nfrom DF8Converter import convert\n\n\ndef ROM(filename: Optional[str]='ROM'):\n ROM = []\n with open(filename) as file:\n contents = file.read().replace(' ', '').replace('\\n', '')\n for i in range(256):\n ROM.append(cont...
[ [ "numpy.zeros", "numpy.ubyte" ] ]
SteveCruz/icpr2022-autoencoder-attractors
[ "0935179b514fd49e1d2410005d91ff49db9978ac" ]
[ "dataset.py" ]
[ "####################################################################################################################################################\n####################################################################################################################################################\n\"\"\"\nDataloa...
[ [ "numpy.array", "numpy.random.choice", "numpy.random.seed", "torch.initial_seed", "torch.Generator", "numpy.min", "numpy.transpose", "torch.utils.data.DataLoader", "numpy.unique" ] ]
JunLi-Galios/unsup_temp_embed_alternating
[ "1b054fd82aadcfe1aa219be17beb77c89efd974e" ]
[ "data_utils/BF_utils/update_argpars.py" ]
[ "#!/usr/bin/env python\n\n\"\"\"Update parameters which directly depends on the dataset.\n\"\"\"\n\n__author__ = 'Anna Kukleva'\n__date__ = 'November 2018'\n\nimport os\nimport os.path as ops\n\nfrom ute.utils.arg_pars import opt\nfrom ute.utils.util_functions import update_opt_str, dir_check\nfrom ute.utils.loggin...
[ [ "torch.cuda.is_available" ] ]
TSummersLab/polgrad-multinoise
[ "c51a81212bc648256976a4696807f7bd2828baa0" ]
[ "polgrad_multinoise/ltimult.py" ]
[ "import numpy as np\nfrom numpy import linalg as la\nfrom matrixmath import is_pos_def, vec, sympart, kron, randn, dlyap, dare, mdot\n\nimport warnings\nfrom warnings import warn\nfrom copy import copy\n\n\n###############################################################################\n# Developer notes\n#########...
[ [ "numpy.isinf", "numpy.dot", "numpy.linalg.norm", "numpy.reshape", "numpy.zeros", "numpy.isnan", "numpy.copy", "numpy.ones", "numpy.eye", "numpy.linalg.solve", "numpy.abs", "numpy.full_like" ] ]
mariogeiger/se3cnn
[ "afd027c72e87f2c390e0a2e7c6cfc8deea34b0cf" ]
[ "tests/point/periodic_convolution_tests.py" ]
[ "# pylint: disable=C,E1101,E1102\nimport unittest\n\nimport torch\nfrom functools import partial\nfrom se3cnn.point.operations import PeriodicConvolution\nfrom se3cnn.point.kernel import Kernel\nfrom se3cnn.point.radial import ConstantRadialModel\n\n\nclass Tests(unittest.TestCase):\n def test1(self):\n t...
[ [ "torch.set_default_dtype", "torch.randn" ] ]
AnonymousCIKM2021-2518/SAEDS
[ "9aa156956a3da28b2d275016b899ed77c8c54005" ]
[ "dialog_fairseq/fairseq/hub_utils.py" ]
[ "#!/usr/bin/env python3 -u\n# Copyright (c) Facebook, Inc. and its affiliates.\n#\n# This source code is licensed under the MIT license found in the\n# LICENSE file in the root directory of this source tree.\n\nimport argparse\nimport copy\nimport logging\nimport os\nfrom typing import Any, Dict, Iterator, List, Tu...
[ [ "torch.is_tensor", "torch.tensor", "torch.nn.ModuleList" ] ]
sji15/oneflow
[ "523888bc251920c39021e7a0e063118d53c4cfd1", "523888bc251920c39021e7a0e063118d53c4cfd1" ]
[ "oneflow/python/test/modules/test_repeat.py", "oneflow/python/test/tensor/test_tensor.py" ]
[ "\"\"\"\nCopyright 2020 The OneFlow Authors. All rights reserved.\n\nLicensed under the Apache License, Version 2.0 (the \"License\");\nyou may not use this file except in compliance with the License.\nYou may obtain a copy of the License at\n\n http://www.apache.org/licenses/LICENSE-2.0\n\nUnless required by ap...
[ [ "numpy.random.randn", "numpy.tile" ], [ "numpy.array", "numpy.random.rand", "numpy.zeros", "numpy.ones", "numpy.random.randn", "numpy.random.randint" ] ]
YangHu-yh/Extrasensory_Data_Mining
[ "37586a31e1532631432fada148df5723a4d7e5c3" ]
[ "utilize/test.py" ]
[ "from sklearn.metrics import multilabel_confusion_matrix, confusion_matrix\r\nfrom sklearn.metrics import accuracy_score\r\nimport numpy as np \r\n\r\ndef evaluate_model(model, X_test, y_test, W_test = None, report = True):\r\n\t'''\r\n\tEstimate a model\r\n\tKeyword Arguments:\r\n\t\tmodel: model to be estimated\r...
[ [ "numpy.concatenate", "numpy.sum", "sklearn.metrics.confusion_matrix", "numpy.expand_dims" ] ]
dargueso/IceVarFigs
[ "d9b1bb3ac09a9dfd097e72b0dba78276b7e251e4" ]
[ "Scripts/SeaIce/NSIDCseaice_Antarctic_quartiles.py" ]
[ "\"\"\"\nReads in current year's Antarctic sea ice extent from Sea Ice Index 3 (NSIDC)\n\nWebsite : ftp://sidads.colorado.edu/DATASETS/NOAA/G02135/north/daily/data/\nAuthor : Zachary M. Labe\nDate : 5 September 2016\n\"\"\"\n\n### Import modules\nimport numpy as np\nimport urllib as UL\nimport datetime\ni...
[ [ "matplotlib.pyplot.text", "matplotlib.pyplot.xlim", "matplotlib.pyplot.savefig", "matplotlib.pyplot.ylim", "numpy.genfromtxt", "matplotlib.pyplot.plot", "matplotlib.pyplot.legend", "matplotlib.pyplot.title", "matplotlib.pyplot.figure", "matplotlib.pyplot.rc", "numpy.whe...
m-guggenmos/remeta
[ "d074d87cb45ae83cd0213ffbecbb3d85036f8cd2" ]
[ "remeta/modelspec.py" ]
[ "from dataclasses import make_dataclass\n\nimport numpy as np\nfrom scipy.optimize import OptimizeResult\n\nfrom .util import TAB, ReprMixin, spearman2d, pearson2d\n\n\nclass Parameter(ReprMixin):\n def __init__(self, guess, bounds, grid_range=None):\n \"\"\"\n Class that defines the fitting charac...
[ [ "numpy.array", "numpy.isnan", "numpy.nansum", "numpy.tile", "numpy.sign", "numpy.abs", "numpy.mod", "numpy.maximum" ] ]
rangwani-harsh/char-cnn-char-rnn-sentiment-analysis
[ "48238232ba053f8c12e66383fd65fc075c532dad" ]
[ "predict.py" ]
[ "import os\nimport sys\nimport torch\nimport mydatasets\nimport torch.autograd as autograd\nimport argparse\nimport torchtext.data as data\ntorch.manual_seed(3)\n\nparser = argparse.ArgumentParser(description='Predictor api')\nparser.add_argument('--snapshot', type=str, default='saved-models/best-cnn.pt', help='fil...
[ [ "torch.max", "torch.autograd.Variable", "torch.manual_seed", "torch.tensor", "torch.load" ] ]
leoatchina/MachineLearning
[ "071f2c0fc6f5af3d9550cfbeafe8d537c35a76d3" ]
[ "h_RNN/RNN.py" ]
[ "import os\r\nimport sys\r\nroot_path = os.path.abspath(\"../\")\r\nif root_path not in sys.path:\r\n sys.path.append(root_path)\r\n\r\nimport random\r\nimport numpy as np\r\nimport tensorflow as tf\r\nimport matplotlib.pyplot as plt\r\nimport tensorflow.contrib.layers as layers\r\n\r\nfrom g_CNN.Optimizers impo...
[ [ "tensorflow.contrib.layers.fully_connected", "numpy.mean", "tensorflow.nn.tanh", "tensorflow.global_variables_initializer", "tensorflow.shape", "numpy.empty", "tensorflow.concat", "tensorflow.variable_scope", "numpy.prod", "numpy.argmax", "tensorflow.nn.dynamic_rnn", ...
andres-fm/tensorflow-clone
[ "bd9db7eb5dc589a620999800ba96a8182c6b624a" ]
[ "tensorflow/python/ops/io_ops.py" ]
[ "# Copyright 2015 The TensorFlow Authors. All Rights Reserved.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless requ...
[ [ "tensorflow.python.ops.gen_io_ops._fixed_length_record_reader", "tensorflow.python.ops.gen_io_ops._reader_serialize_state", "tensorflow.python.framework.tensor_shape.vector", "tensorflow.python.ops.gen_io_ops._save", "tensorflow.python.framework.ops.RegisterShape", "tensorflow.python.ops.g...
pyoung2778/models
[ "45fd9249893b07b73447cf849a770891734c7e3a" ]
[ "official/vision/image_classification/efficientnet/efficientnet_model.py" ]
[ "# Copyright 2021 The TensorFlow Authors. All Rights Reserved.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless requ...
[ [ "tensorflow.keras.layers.Permute", "tensorflow.keras.layers.add", "tensorflow.keras.layers.Input", "tensorflow.keras.layers.Activation", "tensorflow.keras.backend.image_data_format", "tensorflow.keras.layers.multiply", "tensorflow.keras.layers.Reshape", "tensorflow.keras.layers.Dro...
JvPy/PlasmaPy
[ "9ba3f4eb5dbbb1a3d7b25527e0d5eb62c5086edf" ]
[ "plasmapy/utils/decorators/tests/test_checks.py" ]
[ "\"\"\"\nTests for 'check` decorators (i.e. decorators that only check objects but do not\nchange them).\n\"\"\"\nimport inspect\nimport numpy as np\nimport pytest\n\nfrom astropy import units as u\nfrom astropy.constants import c\nfrom plasmapy.utils.decorators.checks import (\n _check_relativistic,\n check_...
[ [ "numpy.array", "numpy.complex" ] ]
jkleve/Optimization-Algoirthms
[ "dec1edd0cd12569b3732d5a7b4bfbcdced9b1568" ]
[ "tests/ga_graph.py" ]
[ "import matplotlib.pyplot as plt\nfrom mpl_toolkits.mplot3d import Axes3D\nfrom matplotlib import cm\nimport numpy as np\nimport sys\nsys.path.append(\"../utils\")\n\nfrom oa_utils import read_xy_data\nfrom test_helpers import gen_filename\nfrom regression_utils import get_regression_coef\n\ninput_loc = '../data/ga...
[ [ "matplotlib.pyplot.show", "numpy.arange", "numpy.meshgrid", "matplotlib.pyplot.figure" ] ]
mekan841/urgent-pathology-routing
[ "a0a7ba17e3f831c51f177c390c283939762da7a2" ]
[ "distances.py" ]
[ "\nimport sys\nimport os\nimport re\nimport json\nimport numpy as np\nimport pandas as pd\nfrom datetime import datetime\nimport random\nimport itertools\nimport math\nfrom collections import defaultdict\nfrom collections import Counter\nimport time\nimport copy\n\nfrom sklearn.preprocessing import OneHotEncoder\nf...
[ [ "pandas.to_datetime", "numpy.array", "sklearn.linear_model.LinearRegression", "pandas.read_csv", "pandas.Series.unique", "pandas.get_dummies" ] ]
DyegoPimentel/PI5A
[ "361d7b1ba3576aa83e14f8d3a177ad2daa4b0ab7" ]
[ "analise de sentimentos.py" ]
[ "# ################################\n# #\n# PROJETO INTEGRADOR 5-A #\n# #\n##################################\n### Alunos: ###\n##################################\n# ANGELUS VICTOR SARAIVA BORGES #\n# DIEGO DE MEDEIROS ...
[ [ "pandas.DataFrame", "matplotlib.pyplot.xlabel", "matplotlib.pyplot.title", "matplotlib.pyplot.legend", "matplotlib.pyplot.subplots", "matplotlib.pyplot.ylabel", "matplotlib.pyplot.show", "matplotlib.pyplot.bar", "matplotlib.pyplot.imshow" ] ]
xr-Yang/CycleGAN-VAE
[ "951d45c5762f92efdea87a9723ed9deabd16c063" ]
[ "util/visualizer.py" ]
[ "import numpy as np\nimport os\nimport ntpath\nimport time\nfrom . import util\nfrom . import html\nfrom scipy.misc import imresize\nimport errno\n\n\n# mkdir\ndef mkdir_if_missing(dir_path):\n try:\n os.makedirs(dir_path)\n except OSError as e:\n if e.errno != errno.EEXIST:\n raise\n...
[ [ "numpy.array" ] ]
ratuagga/curation
[ "047b984f20643e21bf3ab1e309903abaf816ecd5" ]
[ "tests/unit_tests/data_steward/cdr_cleaner/cleaning_rules/remove_participant_data_past_deactivation_date_test.py" ]
[ "\"\"\"\nUnit test for the remove_ehr_data_past_deactivation_date module\n\nOriginal Issue: DC-686\n\nThe intent is to sandbox and drop records dated after the date of deactivation for participants\nwho have deactivated from the Program.\n\"\"\"\n\n# Python imports\nimport unittest\nimport mock\n\n# Third Party imp...
[ [ "pandas.DataFrame" ] ]
FraPorta/pepper_openpose_teloperation
[ "e31bc0b12bd8511dbce9e4449610a08ebe32c184" ]
[ "openpose_wrap/get_and_plot_3Dkeypoints.py" ]
[ "import sys\n\nimport matplotlib.pyplot as plt\nfrom mpl_toolkits.mplot3d import Axes3D\n\nfrom socket_receive import SocketReceive\n\nimport numpy as np\n\n\ntry:\n # Init dictionary\n wp_dict = {}\n\n # initialize socket for receiving the 3D keypoints\n sr = SocketReceive()\n\n # Create matplotlib ...
[ [ "numpy.array", "matplotlib.pyplot.ion", "matplotlib.pyplot.cla", "matplotlib.pyplot.figure", "matplotlib.pyplot.show" ] ]
Opty1337/AI
[ "5f58b72dfece423f150aabb57587b9c6896fddbd" ]
[ "Project_1/Resources/Mark.py" ]
[ "import pickle\r\nimport copy\r\nimport matplotlib.pyplot as plt\r\nimport time\r\nimport imp\r\n\r\nwith open(\"coords.pickle\", \"rb\") as fp: # Unpickling\r\n coords = pickle.load(fp)\r\n \r\nwith open(\"mapasgraph.pickle\", \"rb\") as fp: #Unpickling\r\n AA = pickle.load(fp)\r\nU = AA[1]\r\n\r\ndef...
[ [ "matplotlib.pyplot.plot", "matplotlib.pyplot.imread", "matplotlib.pyplot.gcf", "matplotlib.pyplot.show", "matplotlib.pyplot.axis", "matplotlib.pyplot.imshow" ] ]
jiabinnn/faster-rcnn-pytorch
[ "3192e6a2353f0e290372f9ecddaaa22fdd626695" ]
[ "nets/classifier.py" ]
[ "import warnings\r\nfrom collections import namedtuple\r\nfrom string import Template\r\n\r\nimport torch\r\nfrom torch import nn\r\nfrom torch.autograd import Function\r\nfrom torchvision.ops import RoIPool\r\nimport numpy as np\r\nwarnings.filterwarnings(\"ignore\")\r\n\r\nclass VGG16RoIHead(nn.Module):\r\n de...
[ [ "torch.nn.Linear", "torch.cat", "torch.Tensor" ] ]
pykeen/pykeen
[ "049ab51669e75dc464549611c845381677884247" ]
[ "src/pykeen/nn/emb.py" ]
[ "# -*- coding: utf-8 -*-\n\n\"\"\"Embedding modules.\"\"\"\n\nfrom __future__ import annotations\n\nimport functools\nimport itertools\nimport logging\nimport warnings\nfrom abc import ABC, abstractmethod\nfrom dataclasses import dataclass\nfrom typing import Any, Callable, Mapping, Optional, Sequence, Tuple, TypeV...
[ [ "torch.nn.Linear", "torch.get_default_dtype", "torch.nn.Dropout", "torch.rand", "torch.nn.ModuleList", "torch.nn.init.xavier_uniform_", "torch.nn.BatchNorm1d", "numpy.prod", "torch.empty", "torch.nn.Embedding", "torch.empty_like" ] ]
martinmcbride/python-projects-for-gcse
[ "cdf4696650b641657e116a3307d4271a114b80df" ]
[ "fractals/iterate-henon.py" ]
[ "import matplotlib.pyplot as plt\n\nxvalues = []\nyvalues = []\nx = 1.12\ny = 0.09\n\nfor i in range(10):\n xvalues.append(x)\n yvalues.append(y)\n print(x, y)\n x, y = y+1-1.4*x*x, 0.3*x\n\nplt.plot(xvalues, yvalues)\nplt.plot(xvalues, yvalues, 'bo')\nplt.show()" ]
[ [ "matplotlib.pyplot.show", "matplotlib.pyplot.plot" ] ]
stxinsite/wepy
[ "352d4c1316b20e839aae8824eedd66f0f2d0b456" ]
[ "src/wepy/resampling/resamplers/revo.py" ]
[ "import multiprocessing as mulproc\nimport random as rand\nimport itertools as it\n\nimport logging\nfrom eliot import start_action, log_call\n\nimport numpy as np\n\nfrom wepy.resampling.resamplers.resampler import Resampler\nfrom wepy.resampling.resamplers.clone_merge import CloneMergeResampler\nfrom wepy.resamp...
[ [ "numpy.array", "numpy.zeros", "numpy.log" ] ]
c60evaporator/seaborn-analyzer
[ "af1088dffa7d4afb1061a9b3ed220c9fc0ed6a71" ]
[ "seaborn_analyzer/custom_hist_plot.py" ]
[ "from typing import Dict\nimport seaborn as sns\nimport numpy as np\nimport pandas as pd\nimport matplotlib.pyplot as plt\nfrom scipy import stats\nfrom scipy.stats import distributions\nimport decimal\n\nclass hist():\n # 分布フィッティング線のデフォルトカラーマップ\n _DEFAULT_LINECOLORS = ['red', 'darkmagenta', 'mediumblue', 'da...
[ [ "numpy.histogram", "scipy.stats.norm", "numpy.log", "numpy.roll", "matplotlib.pyplot.subplots", "numpy.mean", "scipy.stats.probplot", "numpy.std", "numpy.amax", "numpy.power", "numpy.amin", "scipy.stats.shapiro", "matplotlib.pyplot.gca" ] ]
berquist/pyresponse
[ "3267b0ca1e5b2e638cd2388532897f2749af8397" ]
[ "pyresponse/tests/properties/test_quadratic_psi4numpy.py" ]
[ "from itertools import permutations, product\n\nimport numpy as np\n\nimport pyscf\n\nfrom pyresponse import cphf, solvers, utils\nfrom pyresponse.core import Hamiltonian, Program, Spin\nfrom pyresponse.properties import electric\nfrom pyresponse.pyscf.molecules import (\n molecule_physicists_water_augccpvdz,\n ...
[ [ "numpy.array", "numpy.dot", "numpy.trace", "numpy.zeros", "numpy.testing.assert_almost_equal", "numpy.set_printoptions", "numpy.allclose", "numpy.abs", "numpy.all", "numpy.diag", "numpy.empty_like" ] ]
denglixi/faster-rcnn.pytorch
[ "12158fa2ec998ba3733a4696b7a4e08a35c157e3" ]
[ "lib/datasets/food_meta_data.py" ]
[ "from __future__ import print_function\nfrom __future__ import absolute_import\n# --------------------------------------------------------\n# Fast R-CNN\n# Copyright (c) 2015 Microsoft\n# Licensed under The MIT License [see LICENSE for details]\n# Written by Ross Girshick\n# ----------------------------------------...
[ [ "numpy.mean", "scipy.io.loadmat", "numpy.zeros" ] ]
PauliKarl/RotationDetection
[ "84bbfe5b1a3ee36e8ad66fd0f36a5ef7b9b0019e", "84bbfe5b1a3ee36e8ad66fd0f36a5ef7b9b0019e" ]
[ "utils/order_points.py", "tools/test_dota_base_q.py" ]
[ "# some code from https://github.com/ming71/toolbox/blob/master/rotation/order_points.py\n\nimport os\nimport math\nimport cv2\nimport numpy as np\n\n\n# this function is confined to rectangle\n# clockwise, write by ming71\ndef order_points(pts):\n # sort the points based on their x-coordinates\n xSorted = pt...
[ [ "numpy.array", "numpy.arccos", "numpy.zeros", "numpy.mean", "numpy.where", "numpy.sqrt", "numpy.argsort", "numpy.iinfo", "scipy.spatial.distance.cdist", "numpy.maximum" ], [ "numpy.array", "numpy.random.rand", "numpy.zeros", "tensorflow.expand_dims", ...
heytanay/pyprobml
[ "f1856d70d0cbc32f22ed623b881b1801d0015d8f" ]
[ "scripts/kalman_filter_spiral_demo.py" ]
[ "# This demo exemplifies the use of the Kalman Filter\n# algorithm when the linear dynamical system induced by the\n# matrix A has imaginary eigenvalues\n# Author: Gerardo Duran-Martin (@gerdm)\n\nimport jax.numpy as jnp\nimport numpy as np\nimport linear_dynamical_systems_lib as lds\nimport matplotlib.pyplot as pl...
[ [ "matplotlib.pyplot.show", "numpy.isclose", "numpy.sqrt", "matplotlib.pyplot.subplots" ] ]
sumanthratna/tune-sklearn
[ "5e8db24724b99c16b660dbdb0f3f54bfa1ecfb81" ]
[ "examples/discrete_bayesian.py" ]
[ "from tune_sklearn import TuneSearchCV\nfrom sklearn import datasets\nfrom sklearn.model_selection import train_test_split\nfrom sklearn.ensemble import RandomForestClassifier\nfrom skopt.space.space import Real\n\ndigits = datasets.load_digits()\nX = digits.data\ny = digits.target\n\nX_train, X_test, y_train, y_te...
[ [ "sklearn.model_selection.train_test_split", "sklearn.datasets.load_digits", "sklearn.ensemble.RandomForestClassifier" ] ]
agemor/pytorch-project-template
[ "9b43db0578d6ea0aa40d2fec577cb50e86e57c7d" ]
[ "evaluate.py" ]
[ "import argparse\n\nimport torch\nimport torch.nn as nn\nimport torch.utils.data as data\n\nimport torchvision\nfrom tqdm import tqdm\n\nimport utils\nfrom model import DummyModel\n\n\ndef main():\n parser = argparse.ArgumentParser(fromfile_prefix_chars='@')\n\n # Type of experiment\n parser.add_argument('...
[ [ "torch.max", "torch.nn.CrossEntropyLoss", "torch.load", "torch.utils.data.DataLoader" ] ]
0316038/tf_models
[ "3ff83c663125aa55e61e996ceee7b6456a47b2d6" ]
[ "research/deeplab/vis.py" ]
[ "# Copyright 2018 The TensorFlow Authors All Rights Reserved.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless requi...
[ [ "tensorflow.logging.set_verbosity", "tensorflow.shape", "tensorflow.expand_dims", "tensorflow.Graph", "tensorflow.Session", "tensorflow.train.ChiefSessionCreator", "tensorflow.logging.info", "tensorflow.global_variables_initializer", "tensorflow.ConfigProto", "tensorflow.gf...
likun-stat/nonstat_model
[ "01a4b210ccabe446bdde36a213407e5813e5ef80" ]
[ "generic_samplers.py" ]
[ "from __future__ import print_function\n# from scipy.stats import norm\n# from scipy.stats import uniform\nimport numpy as np\n\n## --------------------------------------------------------------------- ##\n# A generic Metropolis sampler. You have to supply the log likelihood #\n# function, which need not reall...
[ [ "numpy.array", "numpy.isnan", "numpy.cov", "numpy.zeros", "numpy.log", "numpy.exp", "numpy.eye", "numpy.std", "numpy.arange", "numpy.linalg.cholesky" ] ]
sophiaandaloro/flamedisx
[ "3b55f2d4e63a8e05acc372a998cce7315facb665" ]
[ "tests/test_likelihood.py" ]
[ "import numpy as np\nimport pandas as pd\nimport pytest\nimport tensorflow as tf\n\nimport flamedisx as fd\nfrom flamedisx.likelihood import DEFAULT_DSETNAME\n\n\nn_events = 2\n\n@pytest.fixture(params=[\"ER\", \"NR\"])\ndef xes(request):\n # warnings.filterwarnings(\"error\")\n data = pd.DataFrame([dict(s1=5...
[ [ "tensorflow.exp", "numpy.log", "numpy.testing.assert_almost_equal", "tensorflow.constant", "pandas.concat" ] ]
DomainGroupOSS/ml-recsys-tools
[ "5cf0e360d712c5a0e52f55f20215bf1bd7af672b" ]
[ "ml_recsys_tools/utils/parallelism.py" ]
[ "from multiprocessing import Process, Queue\n\nimport numpy as np\nimport pandas as pd\nfrom itertools import islice\nimport multiprocessing\nfrom multiprocessing.pool import ThreadPool, Pool\n\nfrom ml_recsys_tools.utils.logger import simple_logger as logger\n\n\nN_CPUS = multiprocessing.cpu_count()\n\n\ndef batch...
[ [ "pandas.concat", "numpy.concatenate", "numpy.array_split" ] ]
Trass3r/Halide
[ "7a1fbc464919fd0861c8e18ff2961aa3cb13125d" ]
[ "python_bindings/tutorial/lesson_07_multi_stage_pipelines.py" ]
[ "#!/usr/bin/python3\n# Halide tutorial lesson 7\n\n# This lesson demonstrates how express multi-stage pipelines.\n\n# This lesson can be built by invoking the command:\n# make tutorial_lesson_07_multi_stage_pipelines\n# in a shell with the current directory at the top of the halide source tree.\n# Otherwise, see th...
[ [ "scipy.misc.imread", "scipy.misc.imsave" ] ]
Finasty-lab/IA-Python
[ "286113504906fec11a5aa5fd1d12e38536b1c859", "286113504906fec11a5aa5fd1d12e38536b1c859" ]
[ "CodeIA/venv/Lib/site-packages/imblearn/ensemble/_bagging.py", "CodeIA/Training.py" ]
[ "\"\"\"Bagging classifier trained on balanced bootstrap samples.\"\"\"\n\n# Authors: Guillaume Lemaitre <g.lemaitre58@gmail.com>\n# Christos Aridas\n# License: MIT\n\nimport numbers\n\nimport numpy as np\n\nfrom sklearn.base import clone\nfrom sklearn.ensemble import BaggingClassifier\nfrom sklearn.tree im...
[ [ "numpy.where", "sklearn.base.clone", "sklearn.tree.DecisionTreeClassifier" ], [ "matplotlib.pyplot.subplot", "matplotlib.pyplot.figure", "sklearn.preprocessing.MinMaxScaler", "sklearn.model_selection.train_test_split", "matplotlib.pyplot.show", "pandas.read_csv", "sklea...
shanest/tensorflow
[ "dcb10b1d557168646204239bea6ca5bf1abc40a3", "8e8a8a574020227889b08778f57bfe004d2d5ff5", "dcb10b1d557168646204239bea6ca5bf1abc40a3" ]
[ "tensorflow/contrib/distributions/python/ops/mvn_linear_operator.py", "tensorflow/python/kernel_tests/scatter_nd_ops_test.py", "tensorflow/python/ops/distributions/multinomial.py" ]
[ "# Copyright 2016 The TensorFlow Authors. All Rights Reserved.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless requ...
[ [ "tensorflow.contrib.distributions.python.ops.distribution_util.shapes_from_loc_and_scale", "tensorflow.python.ops.array_ops.identity", "tensorflow.contrib.distributions.python.ops.distribution_util.parent_frame_arguments", "tensorflow.python.ops.distributions.kullback_leibler.RegisterKL", "ten...
jfrob27/pywavan
[ "78b3a2aa60fc0110c205dc6bc29098b2c7f5cdd2" ]
[ "pywavan/halo_transform.py" ]
[ "import numpy as np\nfrom .wavan import uv_plane\n\ndef halo_transform(image):\n\t'''\n\tPerforms halo wavelet transform on image.\n\tReturns wavelets wt as image cube\n\t'''\n\n\tna = image.shape[1]\n\tnb = image.shape[0]\n\tko = 5.336\n\tdelta = (2.*np.sqrt(-2.*np.log(.75)))/ko\n\n\tx, y, shiftx, shifty, ishiftx,...
[ [ "numpy.max", "numpy.fft.ifft2", "numpy.fft.fft2", "numpy.log", "numpy.zeros", "numpy.exp", "numpy.sqrt" ] ]
ZhiquanW/CS231n-Coursework
[ "286089692561c12a82724487ea27db68920fc1f3" ]
[ "assignment2/cs231n/classifiers/fc_net.py" ]
[ "from builtins import range\nfrom builtins import object\nimport numpy as np\n\nfrom cs231n.layers import *\nfrom cs231n.layer_utils import *\n\n\nclass TwoLayerNet(object):\n \"\"\"\n A two-layer fully-connected neural network with ReLU nonlinearity and\n softmax loss that uses a modular layer design. We ...
[ [ "numpy.random.normal", "numpy.ones", "numpy.sum", "numpy.zeros" ] ]