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Given the code snippet: <|code_start|> "type": "Pig", "input_datasource": { "type": "swift", "source": "sahara_tests/scenario/defaults/" "edp-examples/edp-pig/" ...
result = utils.generate_config(['dummyfile.yaml'], None,
Predict the next line after this snippet: <|code_start|># Licensed under the Apache License, Version 2.0 (the "License"); you may # not use this file except in compliance with the License. You may obtain # a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by...
cluster_templates.SaharaClusterTemplateCLITest,
Using the snippet: <|code_start|># Licensed under the Apache License, Version 2.0 (the "License"); you may # not use this file except in compliance with the License. You may obtain # a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agre...
plugins.SaharaPluginCLITest,
Given the code snippet: <|code_start|># Licensed under the Apache License, Version 2.0 (the "License"); you may # not use this file except in compliance with the License. You may obtain # a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or...
job_binaries.SaharaJobBinaryCLITest,
Given the code snippet: <|code_start|># Licensed under the Apache License, Version 2.0 (the "License"); you may # not use this file except in compliance with the License. You may obtain # a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or...
jobs.SaharaJobCLITest,
Continue the code snippet: <|code_start|># Licensed under the Apache License, Version 2.0 (the "License"); you may # not use this file except in compliance with the License. You may obtain # a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law...
job_templates.SaharaJobTemplateCLITest,
Predict the next line after this snippet: <|code_start|># Licensed under the Apache License, Version 2.0 (the "License"); you may # not use this file except in compliance with the License. You may obtain # a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by...
data_sources.SaharaDataSourceCLITest,
Predict the next line after this snippet: <|code_start|> project_name = os.environ.get('OS_PROJECT_NAME', '') os.environ['OS_USERNAME'] = 'demo_env' os.environ['OS_PASSWORD'] = 'demopwd_env' os.environ['OS_AUTH_URL'] = 'http://localhost:5000/v2.0' os.environ['OS_PROJECT_NAME'] = '...
unit_dir = pkg.resource_filename(version.version_info.package,
Predict the next line for this snippet: <|code_start|> '%Y%m%d_%H%M%S') test_info['status'] = CHECK_FAILED_STATUS test_info['traceback'] = traceback.format_exception( *sys.exc_info()) if exit_with_error: raise ...
timeouts.Defaults.init_defaults(self.testcase)
Next line prediction: <|code_start|> return [job_id, input_id, output_id, configs] @track_result("Check EDP jobs", False) def check_run_jobs(self): batching = self.testcase.get('edp_batching', len(self.testcase['edp_jobs_flow'])) batching_size = batch...
destination = None if source else utils.rand_name(
Using the snippet: <|code_start|> self._job_batching(pre_exec) pre_exec = [] batching = batching_size self.check_verification(self.cluster_id) def _job_batching(self, pre_exec): job_exec_ids = [] for job_exec in pre_exec: job_exec_i...
'endpoint': utils_url.url_schema_remover(
Here is a snippet: <|code_start|> return ([0, ] + throughputs, forecasts) def _make_recent_history_table(self, throughputs): recent_history = [] for i in range(0, len(self.filter_summaries)): summary = self.filter_summaries[i] recent_history.append( [s...
generate_dashboard.delay()
Predict the next line for this snippet: <|code_start|> class HealthCheck(View): def get(self, request, *args, **kwargs): last_access = cache.get('health_access', None) content = { 'health': 'ok', 'last_access': last_access, } cache.set('health_access', dat...
updated = summaries.latest_update()
Next line prediction: <|code_start|>class Forecast(TemplateView): template_name = "forecast.html" def find_summaries_or_404(self, filter_id): self.filter_summaries = summaries.for_date_range(filter_id, self.start_date) if not self.filter_summaries: raise Http404("No filter with id: ...
throughputs = predictions.throughput_history(self.filter_summaries)
Here is a snippet: <|code_start|># -*- coding: utf-8 -*- # Generated by Django 1.9.7 on 2016-07-16 13:33 from __future__ import unicode_literals def migrate_fill_updated_at(apps, schema_editor): """Fill the updated_at column if it's not already.""" ProjectSummary = apps.get_model('dashboard', 'ProjectSummar...
summary = fill_updated_at(summary)
Given the code snippet: <|code_start|> urlpatterns = [ url(r'^$', Dashboard.as_view(), name="dashboard"), url(r'^forecast/(?P<filter_id>[0-9]+)/$', Forecast.as_view(), name="forecast"), url(r'^refresh/$', Refresh.as_view(), name="refresh"), <|code_end|> , generate the next line using the imports in this fi...
url(r'^health/$', HealthCheck.as_view(), name="health"),
Given snippet: <|code_start|> urlpatterns = [ url(r'^$', Dashboard.as_view(), name="dashboard"), url(r'^forecast/(?P<filter_id>[0-9]+)/$', Forecast.as_view(), name="forecast"), <|code_end|> , continue by predicting the next line. Consider current file imports: from django.conf.urls import url from .views impo...
url(r'^refresh/$', Refresh.as_view(), name="refresh"),
Based on the snippet: <|code_start|> return xtras def _add_forecasts(xtras, summary, logger): a_month_ago = summary.created_on - relativedelta(days=30) try: forecasts = predictions.for_project(filter_id=summary.filter_id, backlog_size=summary.incomplete, start_date=a_month_ago) except ValueErro...
data = sheets.load_sheet(sheet_id, settings.GOOGLE_SPREADSHEET_AUTH_FILE)
Here is a snippet: <|code_start|> def _add_current_jira_summary(xtras, jira_filter_id, logger): summary_data = jira.summarize_query(jira_filter_id) logger.debug("Filter {} summarized".format(jira_filter_id)) if summary_data.get('errors', []): xtras['jira_summary_errors'] = summary_data['errors'...
p = summaries.create(
Predict the next line for this snippet: <|code_start|> summary_data = jira.summarize_query(jira_filter_id) logger.debug("Filter {} summarized".format(jira_filter_id)) if summary_data.get('errors', []): xtras['jira_summary_errors'] = summary_data['errors'] logger.warn("Filter {} summary error"...
forecasts = predictions.for_project(filter_id=summary.filter_id, backlog_size=summary.incomplete, start_date=a_month_ago)
Using the snippet: <|code_start|>"""Classes and functions for manipulating and storing summaries.""" SAVED = "saved" UPDATED = "updated" def fill_updated_at(summary): """Set updated_at to created_on at 11:59 pm UTC""" summary.updated_at = timezone.now().replace( year=summary.created_on.year, ...
p = ProjectSummary(
Next line prediction: <|code_start|> if throughput < 0: throughput = 0 history.append(throughput) return history def forecast(throughputs, backlog_size, num_simulations=10000, seed=None): """Monte Carlo forecast given the provided backlog and throughput histories. Args: ...
summaries = for_date_range(filter_id, start_date)
Next line prediction: <|code_start|> class CommunityPKProxy(RecordPKProxy): """Resolver proxy for a Record entity using the UUID.""" def get_need(self): """Return the user need of the community's owner.""" # TODO this may become difficult once there's multiple levels # of members...
Community, type_key=self.type_id, proxy_cls=CommunityPKProxy)
Based on the snippet: <|code_start|># -*- coding: utf-8 -*- # # Copyright (C) 2021 CERN. # Copyright (C) 2022 Northwestern University. # # Invenio-Communities is free software; you can redistribute it and/or # modify it under the terms of the MIT License; see LICENSE file for more # details. """Entity resolver for the...
return CommunityNeed(comid)
Predict the next line for this snippet: <|code_start|> def edit(self, identity, draft=None, record=None, **kwargs): """Update draft metadata.""" draft.access = record.access def new_version(self, identity, draft=None, record=None, **kwargs): """Update draft metadata.""" draft.acc...
on_membership_change(identity=identity)
Given the following code snippet before the placeholder: <|code_start|># -*- coding: utf-8 -*- # # Copyright (C) 2021 CERN. # # Invenio-Communities is free software; you can redistribute it and/or # modify it under the terms of the MIT License; see LICENSE file for more # details. class CommunityRelationMixin: ...
db.ForeignKey(CommunityMetadata.id, ondelete="CASCADE"),
Based on the snippet: <|code_start|> return # Cache keys # # The cache of communities must be invalidated on: # 1) on creation of a community (likely this one is modelled via membership # in the future). # 2) add/remove/change of membership # # We construct the cache key for e...
identity.provides.add(CommunityNeed(c_id))
Predict the next line for this snippet: <|code_start|> @pytest.fixture() def headers(): """Default headers for making requests.""" return { 'content-type': 'application/json', 'accept': 'application/json', } @pytest.fixture() def client_with_login(client, users): """Log in a user to th...
Community.index.refresh()
Given the code snippet: <|code_start|> {'text': 'Engineering', 'value': 'engineering'}, {'text': 'Technology', 'value': 'technology'}, {'text': 'History and Archaeology', 'value': 'history_and_archaeology'}, {'text': 'Information and Computing Sciences', 'value': 'information_and_computing_sciences'}, ...
'facet': facets.type,
Using the snippet: <|code_start|># -*- coding: utf-8 -*- # # This file is part of Invenio. # Copyright (C) 2016-2021 CERN. # # Invenio is free software; you can redistribute it and/or modify it # under the terms of the MIT License; see LICENSE file for more details. """Community access system field.""" class Commun...
owners_cls = Owners
Predict the next line after this snippet: <|code_start|> class CommunitiesRelationManager: """Manager for a record's community relations.""" def __init__(self, m2m_model_cls, record_id, data): self._m2m_model_cls = m2m_model_cls self._record_id = record_id self._default_id = None ...
c = Community.get_record(community_id)
Next line prediction: <|code_start|># Invenio-Communities is free software; you can redistribute it and/or modify # it under the terms of the MIT License; see LICENSE file for more details. """Invitations Actions.""" class AcceptAction(RequestAction): """Accept action.""" status_from = ['open'] status...
current_communities.service.members.create(
Given snippet: <|code_start|># -*- coding: utf-8 -*- # # Copyright (C) 2022 Northwestern University. # # Invenio-Communities is free software; you can redistribute it and/or modify # it under the terms of the MIT License; see LICENSE file for more details. """Members Service Config.""" class MemberLink(Link): ...
record_cls = Member
Given snippet: <|code_start|># Copyright (C) 2022 Northwestern University. # # Invenio-Communities is free software; you can redistribute it and/or modify # it under the terms of the MIT License; see LICENSE file for more details. """Members Service Config.""" class MemberLink(Link): """Link variables setter f...
permission_policy_cls = CommunityMembersPermissionPolicy
Based on the snippet: <|code_start|># -*- coding: utf-8 -*- # # Copyright (C) 2022 Northwestern University. # # Invenio-Communities is free software; you can redistribute it and/or modify # it under the terms of the MIT License; see LICENSE file for more details. """Members Service Config.""" class MemberLink(Link...
schema = MemberSchema
Here is a snippet: <|code_start|> ) @login_required def communities_new(): """Communities creation page.""" return render_template( "invenio_communities/new.html", form_config=dict( access=dict( visibilty=[ { 'text': 'Pu...
@pass_community
Here is a snippet: <|code_start|> @login_required def communities_new(): """Communities creation page.""" return render_template( "invenio_communities/new.html", form_config=dict( access=dict( visibilty=[ { 'text': 'Public',...
@pass_community_logo
Given snippet: <|code_start|> } ] ), SITE_UI_URL=current_app.config["SITE_UI_URL"] ), ) @pass_community @pass_community_logo def communities_detail(community=None, logo=None, pid_value=None): """Community detail page.""" return render_templ...
@require_community_owner
Predict the next line for this snippet: <|code_start|>"""Example of a record draft API.""" class MockRecord(RecordBase): """Example parent record.""" # Configuration model_cls = MockRecordMetadata # System fields schema = ConstantField('$schema', 'local://mocks/mock-v1.0.0.json') index =...
communities = CommunitiesField(MockRecordCommunity)
Here is a snippet: <|code_start|>"""Example of a record draft API.""" class MockRecord(RecordBase): """Example parent record.""" # Configuration model_cls = MockRecordMetadata # System fields schema = ConstantField('$schema', 'local://mocks/mock-v1.0.0.json') index = IndexField('mocks-mo...
communities = CommunitiesField(MockRecordCommunity)
Predict the next line for this snippet: <|code_start|># under the terms of the MIT License; see LICENSE file for more details. """Command-line tools for demo module.""" @click.group() def communities(): """Invenio communities commands.""" @communities.command('demo') @with_appcontext def demo(): """Creat...
communities_service = current_communities.service
Predict the next line for this snippet: <|code_start|># -*- coding: utf-8 -*- # # This file is part of Invenio. # Copyright (C) 2016-2021 CERN. # # Invenio is free software; you can redistribute it and/or modify it # under the terms of the MIT License; see LICENSE file for more details. """Command-line tools for demo ...
fake_data = create_fake_community(faker)
Based on the snippet: <|code_start|># -*- coding: utf-8 -*- # # This file is part of Invenio. # Copyright (C) 2016-2021 CERN. # # Invenio is free software; you can redistribute it and/or modify it # under the terms of the MIT License; see LICENSE file for more details. """Command-line tools for demo module.""" @cl...
create_demo_community.delay(fake_data)
Next line prediction: <|code_start|> """Register blueprint routes on app.""" routes = app.config.get("COMMUNITIES_ROUTES") blueprint = Blueprint( "invenio_communities", __name__, template_folder="../templates", static_folder='../static' ) # control blueprint endpoint...
view_func=communities_detail,
Given snippet: <|code_start|> return render_template("invenio_communities/tombstone.html"), 410 def record_permission_denied_error(error): """Handle permission denier error on record views.""" if not current_user.is_authenticated: # trigger the flask-login unauthorized handler return curren...
view_func=communities_frontpage,
Given the code snippet: <|code_start|> # # Registration # def create_ui_blueprint(app): """Register blueprint routes on app.""" routes = app.config.get("COMMUNITIES_ROUTES") blueprint = Blueprint( "invenio_communities", __name__, template_folder="../templates", static_folder...
view_func=communities_new,
Given the following code snippet before the placeholder: <|code_start|> if not current_user.is_authenticated: # trigger the flask-login unauthorized handler return current_app.login_manager.unauthorized() return render_template(current_app.config['THEME_403_TEMPLATE']), 403 # # Registration # d...
view_func=communities_search,
Predict the next line after this snippet: <|code_start|> template_folder="../templates", static_folder='../static' ) # control blueprint endpoints registration if app.config["COMMUNITIES_ENABLED"]: # Communities URL rules blueprint.add_url_rule( routes["frontpage"...
view_func=communities_settings,
Given the following code snippet before the placeholder: <|code_start|> if app.config["COMMUNITIES_ENABLED"]: # Communities URL rules blueprint.add_url_rule( routes["frontpage"], view_func=communities_frontpage, ) blueprint.add_url_rule( routes["se...
view_func=communities_settings_privileges,
Using the snippet: <|code_start|># Copyright (C) 2022 Northwestern University. # # Invenio-Communities is free software; you can redistribute it and/or modify # it under the terms of the MIT License; see LICENSE file for more details. """Invitation request types.""" # Actions class AcceptAction(RequestAction): ...
current_communities.service.members.create(
Using the snippet: <|code_start|> super().execute(identity, uow) # Request types class CommunityMemberInvitation(BaseRequestType): """Community member invitation request type.""" type_id = 'community-member-invitation' name = _('Community Member Invitation') available_statuses = { "o...
payload_schema = MemberInvitationPayloadSchema().fields
Using the snippet: <|code_start|> ] error_messages = set([item['messages'][0] for item in response.json['errors']]) assert expected == len(set(error_messages_list).intersection(error_messages)) def test_simple_flow( app, client_with_login, location, minimal_community, headers, ...
Community.index.refresh()
Based on the snippet: <|code_start|># -*- coding: utf-8 -*- # # Copyright (C) 2022 Northwestern University. # # Invenio-Communities is free software; you can redistribute it and/or modify # it under the terms of the MIT License; see LICENSE file for more details. """Member Model.""" class MemberModel(db.Model, Re...
db.ForeignKey(CommunityMetadata.id, ondelete="CASCADE"),
Given the following code snippet before the placeholder: <|code_start|># This Source Code Form is subject to the terms of the Mozilla Public # License, v. 2.0. If a copy of the MPL was not distributed with this # file, You can obtain one at http://mozilla.org/MPL/2.0/. # # Copyright (c) 2015-2018 Digi International Inc...
for fd in dc.filedata.get_filedata(fd_path == "~/"):
Predict the next line after this snippet: <|code_start|> PUT_FILE_DATA_COMMAND = """\ <commands>\ <put_file {offset}path="{path}" truncate="{truncate}">\ <data>{data}</data>\ </put_file>\ </commands>\ """ PUT_FILE_FILE_COMMAND = """\ <commands>\ <put_file {offset}path="{path}" truncate="{truncate}">\ <file>{server_fil...
file1 = FileInfo(self.fss_api, self.dev_id, '/a/path/file1.txt', 1436276773, 7989,
Continue the code snippet: <|code_start|> et = getcommand.get_etree() self.assertEqual(et.tag, 'get_file') self.assertEqual('/a/path/here', et.get('path')) self.assertEqual('5', et.get('offset', None)) self.assertEqual('10', et.get('length', None)) self.assertEqual(0, len(...
putcommand = PutCommand(path='/a/path/here', file_data=six.b("some file data"))
Continue the code snippet: <|code_start|> self.assertEqual('/a/path/here', et.get('path')) self.assertEqual('5', et.get('offset', None)) self.assertEqual('true', et.get('truncate')) self.assertEqual(1, len(list(et))) data = et.find('./data') self.assertEqual(base64.b64enco...
delcommand = DeleteCommand(path='/a/path/here')
Based on the snippet: <|code_start|> def test_parse_wrong_response(self): self.assertRaises(ResponseParseError, PutCommand.parse_response, ET.fromstring('<rm />')) class TestDeleteCommand(unittest.TestCase): def test_init(self): delcommand = DeleteCommand(path='/a/path/here') et = delc...
command_block = FileSystemServiceCommandBlock()
Using the snippet: <|code_start|>class TestCommandBlock(unittest.TestCase): def test_init(self): command_block = FileSystemServiceCommandBlock() et = command_block.get_etree() self.assertEqual(et.tag, 'commands') self.assertEqual(0, len(list(et))) self.assertEqual(0, len(et.k...
self.target = AllTarget()
Given snippet: <|code_start|> self.assertEqual(errinfo.message, "error text") def test_parse_wrong_response(self): self.assertRaises(ResponseParseError, DeleteCommand.parse_response, ET.fromstring('<put_file />')) class TestCommandBlock(unittest.TestCase): def test_init(self): command_...
class TestFileSystemServiceAPI(HttpTestBase):
Here is a snippet: <|code_start|> "resultTotalRows": "0", "requestedStartRow": "0", "resultSize": "0", "requestedSize": "1000", "remainingSize": "0", "items": [] } """ class TestMonitorAPI(HttpTestBase): def test_create_tcp_monitor(self): self.prepare_response("POST", "/ws/Monitor"...
mons = list(self.dc.monitor.get_monitors((MON_TOPIC_ATTR == "DeviceCore") &
Continue the code snippet: <|code_start|> "requestedStartRow": "0", "resultSize": "0", "requestedSize": "1000", "remainingSize": "0", "items": [] } """ class TestMonitorAPI(HttpTestBase): def test_create_tcp_monitor(self): self.prepare_response("POST", "/ws/Monitor", data=CREATE_MONITO...
(MON_TRANSPORT_TYPE_ATTR == "tcp")))
Given the code snippet: <|code_start|> "monStatus": "INACTIVE", "monBatchDuration": "10" }, { "monId": "178007", "cstId": "7603", "monTopic": "DeviceCore,FileDataCore,FileData,DataPoint", "monTransportType": "http", "monF...
class TestMonitorAPI(HttpTestBase):
Given snippet: <|code_start|># This Source Code Form is subject to the terms of the Mozilla Public # License, v. 2.0. If a copy of the MPL was not distributed with this # file, You can obtain one at http://mozilla.org/MPL/2.0/. # # Copyright (c) 2015-2018 Digi International Inc. """Provide access to Device Cloud filed...
class FileDataAPI(APIBase):
Given snippet: <|code_start|>fd_path = Attribute("fdPath") fd_name = Attribute("fdName") fd_type = Attribute("fdType") fd_customer_id = Attribute("customer_id") fd_created_date = Attribute("fdCreatedDate") fd_last_modified_date = Attribute("fdLastModifiedDate") fd_content_type = Attribute("fdContentType") fd_size = Att...
condition = validate_type(condition, type(None), Expression, *six.string_types)
Given the code snippet: <|code_start|> def __init__(self, fdapi, json_data): self._fdapi = fdapi self._json_data = json_data def delete(self): """Delete this file or directory""" return self._fdapi.delete_file(self.get_full_path()) def get_data(self): """Get the dat...
return iso8601_to_dt(self._json_data["fdLastModifiedDate"])
Continue the code snippet: <|code_start|>fd_path = Attribute("fdPath") fd_name = Attribute("fdName") fd_type = Attribute("fdType") fd_customer_id = Attribute("customer_id") fd_created_date = Attribute("fdCreatedDate") fd_last_modified_date = Attribute("fdLastModifiedDate") fd_content_type = Attribute("fdContentType") f...
condition = validate_type(condition, type(None), Expression, *six.string_types)
Given the code snippet: <|code_start|> class AsyncRequestProxy(object): """An object representing an asynychronous SCI request. Can be used for polling the status of the corresponding request. :ivar job_id: the ID in device cloud of the job :ivar response: the response to the request if completed ...
class ServerCommandInterfaceAPI(APIBase):
Based on the snippet: <|code_start|> :type last_modified: int :param size: The size of the file :type size: int :param hash: The files hash :param hash_type: The method used to produce the hash :ivar device_id: The Device ID of the device this file is on :ivar path: The path to this file on ...
target = DeviceTarget(self.device_id)
Given the following code snippet before the placeholder: <|code_start|> def parse_response(cls, response, **kwargs): """Parse the server response for this put file command This will parse xml of the following form:: <rm /> or with an error:: <rm> <err...
class FileSystemServiceAPI(SCIAPIBase):
Here is a snippet: <|code_start|># This Source Code Form is subject to the terms of the Mozilla Public # License, v. 2.0. If a copy of the MPL was not distributed with this # file, You can obtain one at http://mozilla.org/MPL/2.0/. # # Copyright (c) 2015-2018 Digi International Inc. def show_group_tree(dc): stats...
(dev_mac == '00:40:9D:50:B0:EA')
Given the following code snippet before the placeholder: <|code_start|># This Source Code Form is subject to the terms of the Mozilla Public # License, v. 2.0. If a copy of the MPL was not distributed with this # file, You can obtain one at http://mozilla.org/MPL/2.0/. # # Copyright (c) 2015-2018 Digi International Inc...
len(list(dc.devicecore.get_devices(group_path == group.get_path())))
Based on the snippet: <|code_start|># This Source Code Form is subject to the terms of the Mozilla Public # License, v. 2.0. If a copy of the MPL was not distributed with this # file, You can obtain one at http://mozilla.org/MPL/2.0/. # # Copyright (c) 2015-2018 Digi International Inc. def show_group_tree(dc): st...
dc = get_authenticated_dc()
Predict the next line after this snippet: <|code_start|># This Source Code Form is subject to the terms of the Mozilla Public # License, v. 2.0. If a copy of the MPL was not distributed with this # file, You can obtain one at http://mozilla.org/MPL/2.0/. # # Copyright (c) 2015-2018 Digi International Inc. """Module wi...
value = isoformat(to_none_or_dt(value))
Given the code snippet: <|code_start|># This Source Code Form is subject to the terms of the Mozilla Public # License, v. 2.0. If a copy of the MPL was not distributed with this # file, You can obtain one at http://mozilla.org/MPL/2.0/. # # Copyright (c) 2015-2018 Digi International Inc. """Module with functionality f...
value = isoformat(to_none_or_dt(value))
Predict the next line after this snippet: <|code_start|># # Copyright (c) 2015-2018 Digi International Inc. dev_mac = Attribute('devMac') group_id = Attribute('grpId') group_path = Attribute('grpPath') dev_connectware_id = Attribute('devConnectwareId') # TODO: Can we support location based device lookups? (e.g. lat...
class DeviceCoreAPI(APIBase):
Continue the code snippet: <|code_start|> APIBase.__init__(self, conn) self._sci = sci def get_devices(self, condition=None, page_size=1000): """Iterates over each :class:`Device` for this device cloud account Examples:: # get a list of all devices all_devic...
condition = validate_type(condition, type(None), Expression, *six.string_types)
Given the code snippet: <|code_start|> """Get this device's device id""" device_json = self.get_device_json(use_cached) return device_json["id"].get("devId") def get_ip(self, use_cached=True): """Get the last known IP of this device""" device_json = self.get_device_json(use_c...
return iso8601_to_dt(start_date_iso8601)
Given the following code snippet before the placeholder: <|code_start|> APIBase.__init__(self, conn) self._sci = sci def get_devices(self, condition=None, page_size=1000): """Iterates over each :class:`Device` for this device cloud account Examples:: # get a list of all...
condition = validate_type(condition, type(None), Expression, *six.string_types)
Predict the next line for this snippet: <|code_start|> random_state : random_state Set the initial random state. Returns ------- numpy.ndarray Sampled outcome. """ return func class DeltaProdLik(object): r""" Product of Kronecker delta likeli...
link = IdentityLink()
Here is a snippet: <|code_start|> return _aca(x) @property def sample_size(self): r"""Get the number of samples.""" assert self.outcome is not None return len(self.outcome) class BernoulliProdLik(object): r""" Product of Bernoulli likelihoods. The product can be wr...
link = LogitLink
Using the snippet: <|code_start|> r"""Mean of the number of successful trials.""" return self._link.inv(x) @_sample_doc def sample(self, x, random_state=None): p = self.mean(x) nt = ascontiguousarray(self._ntrials, dtype=int) return _aca(st.binom(nt, p).rvs(random_state=...
link = LogLink()
Continue the code snippet: <|code_start|> """ return kron(self.A, self.X) def value(self): """ Kronecker mean function. Returns ------- 𝐦 : ndarray (A⊗X)vec(B). """ return self.AX @ self._vecB.value def gradient(self): ...
return unvec(self._vecB.value, (self.X.shape[1], self.A.shape[0]))
Given the code snippet: <|code_start|> """ Kronecker mean function. Returns ------- 𝐦 : ndarray (A⊗X)vec(B). """ return self.AX @ self._vecB.value def gradient(self): """ Gradient of the linear mean function. Returns ...
self._vecB.value = vec(asarray(v, float))
Predict the next line after this snippet: <|code_start|> def test_givencov(): K = RandomState(0).randn(5, 5) K = K @ K.T <|code_end|> using the current file's imports: from numpy.random import RandomState from numpy.testing import assert_allclose from glimix_core.cov import GivenCov and any relevant contex...
cov = GivenCov(K)
Given the code snippet: <|code_start|> def test_probit_link(): link = ProbitLink() assert_allclose(link.value(link.inv(3.2)), 3.2) def test_logit_link(): <|code_end|> , generate the next line using the imports in this file: from numpy.testing import assert_allclose from glimix_core.link import LogitLink, L...
link = LogitLink()
Continue the code snippet: <|code_start|> def test_probit_link(): link = ProbitLink() assert_allclose(link.value(link.inv(3.2)), 3.2) def test_logit_link(): link = LogitLink() assert_allclose(link.value(link.inv(3.2)), 3.2) def test_loglink_link(): <|code_end|> . Use current file imports: from nu...
link = LogLink()
Next line prediction: <|code_start|> @scale.setter def scale(self, scale): scale = max(scale, epsilon.tiny) self._logscale.value = log(scale) def value(self): """ Covariance matrix, s⋅K₀. Returns ------- K : ndarray s⋅K₀. """ ...
return format_function(self, {"K0": "..."}, [("scale", self.scale)])
Using the snippet: <|code_start|> """ Dimension of the matrix, d. It corresponds to the number of rows and to the number of columns. """ return self._I.shape[0] def value(self): """ Covariance matrix. Returns ------- K : ndarray ...
return format_function(self, {"dim": self._I.shape[0]}, [("scale", self.scale)])
Predict the next line for this snippet: <|code_start|> return K + self._epsilon * eye(K.shape[0]) def gradient(self): """ Derivative of the covariance matrix over the parameters of L. Returns ------- Lu : ndarray Derivative of K over the lower triangular ...
return format_function(self, {"dim": self._L.shape[0]}, [("L", self.L)])
Here is a snippet: <|code_start|>def test_util_check_economic_qs(): A = ones((3, 2)) B = ones((3, 1)) C = ones(2) with pytest.raises(ValueError): check_economic_qs(A) with pytest.raises(ValueError): check_economic_qs((A, C)) A[0, 0] = inf QS = ((A, B), C) with pytest...
check_covariates(A)
Predict the next line for this snippet: <|code_start|> def test_util_check_economic_qs(): A = ones((3, 2)) B = ones((3, 1)) C = ones(2) with pytest.raises(ValueError): <|code_end|> with the help of current file imports: import pytest from numpy import array, asarray, block, inf, nan, ones from num...
check_economic_qs(A)
Predict the next line for this snippet: <|code_start|> A[0, 0] = inf QS = ((A, B), C) with pytest.raises(ValueError): check_economic_qs(QS) A[0, 0] = 1 C[0] = nan with pytest.raises(ValueError): check_economic_qs(QS) def test_util_check_covariates(): A = ones(2) B = o...
check_outcome((y,), "poisson")
Given the following code snippet before the placeholder: <|code_start|> check_outcome((y,), "poisson") y[0] = 0.5 want = array([0.5, 1.0, 1.0, 1.0, 1.0]) assert_allclose(check_outcome(y, "poisson"), want) x = ones(4) with pytest.raises(ValueError): check_outcome((y, x), "bernoulli"...
SVD0 = hsvd(A[0, 0], A[0, 1], A[1, 1])
Continue the code snippet: <|code_start|> def test_mean_kron(): random = RandomState(0) # number of trais p = 2 # number of covariates c = 3 # sample size n = 4 A = random.randn(p, p) X = random.randn(n, c) B = random.randn(p, c) <|code_end|> . Use current file imports: fro...
mean = KronMean(A, X)
Predict the next line after this snippet: <|code_start|> @scale.setter def scale(self, scale): scale = max(scale, epsilon.tiny) self._logscale.value = log(scale) def value(self): """ Covariance matrix. Returns ------- K : ndarray s⋅XXᵀ. ...
return format_function(self, {}, [("scale", self.scale)])
Predict the next line after this snippet: <|code_start|> ---------- y : array_like Outcome variable. lik : tuple Likelihood definition. The first item is one of the following likelihood names: ``"Bernoulli"``, ``"Binomial"``, ``"Normal"``, and ``"Poisson"``. For `Binomial`, th...
self._X = check_covariates(X)
Predict the next line for this snippet: <|code_start|> Likelihood definition. The first item is one of the following likelihood names: ``"Bernoulli"``, ``"Binomial"``, ``"Normal"``, and ``"Poisson"``. For `Binomial`, the second item is an array of outcomes. X : array_like Covariates. ...
self._QS = check_economic_qs(QS)
Continue the code snippet: <|code_start|> Parameters ---------- y : array_like Outcome variable. lik : tuple Likelihood definition. The first item is one of the following likelihood names: ``"Bernoulli"``, ``"Binomial"``, ``"Normal"``, and ``"Poisson"``. For `Binomial`, th...
self._y = check_outcome(y, self._lik)
Predict the next line for this snippet: <|code_start|> Outcome variable. lik : tuple Likelihood definition. The first item is one of the following likelihood names: ``"Bernoulli"``, ``"Binomial"``, ``"Normal"``, and ``"Poisson"``. For `Binomial`, the second item is an array of outcome...
self._QS = economic_qs_zeros(self._y.shape[0])