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PRESENTING SYMPTOMS: none
PRIMARY DIAGNOSIS: Bipolar I disorder, most recent episode (or current) depressed, severe, without mention of psychotic behavior
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19,018,059 | 24,925,478 | F | 66 | 0 | BLACK/AFRICAN AMERICAN | OBSERVATION ADMIT | WALK-IN/SELF REFERRAL | HOME HEALTH CARE | [] | [
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PRESENTING SYMPTOMS: none
PRIMARY DIAGNOSIS: Atherosclerotic heart disease of native coronary artery with unstable angina pectoris
ACTIVE DIAGNOSES: Atherosclerotic heart disease of native coronary artery with uns... | [1] The patient is a 66-year-old female admitted from WALK-IN/SELF REFERRAL.
[2] The patient was discharged alive to HOME HEALTH CARE.
[3] The patient presented with none.
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12,726,133 | 20,282,845 | M | 42 | 2117-02-21 | 0 | WHITE | DIRECT OBSERVATION | TRANSFER FROM HOSPITAL | [
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"Diverticulum of bladder",
"Dorsalgia, unspecified",
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PRESENTING SYMPTOMS: Hematuria, unspecified; Frequency of micturition
PRIMARY DIAGNOSIS: Hematuria, unspecified
ACTIVE DIAGNOSES: Bladder disorder, unspecified; Diverticulum of bladder; Dorsalgia, unspecified; Major depressive diso... | [1] The patient is a 42-year-old male admitted from transfer from hospital.
[2] The patient presented with hematuria and frequency of micturition.
[3] The primary diagnosis is hematuria, unspecified.
[4] The active diagnoses are bladder disorder, unspecified; diverticulum of bladder; dorsalgia, unspecified; and major d... | 24 | 1 | 1 | true | v3 | 0 | [
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14,139,133 | 20,698,366 | F | 71 | 2120-09-30 | 0 | WHITE | EW EMER. | EMERGENCY ROOM | HOME HEALTH CARE | [] | [
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"Intestinal or peritoneal adhesions with obstruction (postoperative) (postinfection)",
"Acute kidney failure, unspecified",
"Secondary malignant neoplasm of retroperitoneum and peritoneum",
"Urinary tract infection, site not specified",
"Other specified intestinal obstructio... | [
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"Colostomy status",
"Do not resuscitate status"
] | [] | Malignant neoplasm of ovary | [] | [
{
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{
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},
{
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... | [] | [
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"UNKNOWN",
"Hematology/Oncology"
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"description": "FEMALE REPRODUCTIVE SYSTEM MALIGNANCY",
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},
{
"description": "MALIGNANCY, FEMALE REPRODUCTIVE SYSTEM W CC",
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}
] | [] | 0 | 12 | 3 | 0 | 28 | 0 | 1 | 71F, EW EMER. admission from EMERGENCY ROOM.
OUTCOME: discharged alive to HOME HEALTH CARE
PRESENTING SYMPTOMS: none
PRIMARY DIAGNOSIS: Malignant neoplasm of ovary
ACTIVE DIAGNOSES: Malignant neoplasm of ovary; Intestinal or peritoneal adhesions with obstruction (postoperative) (postinfection); Acute kidney failure, un... | [1] The patient is a 71-year-old female admitted from the Emergency Room.
[2] The patient was evaluated for Malignant neoplasm of ovary.
[3] The patient was evaluated for Intestinal or peritoneal adhesions with obstruction (postoperative) (postinfection).
[4] The patient was evaluated for Acute kidney failure, unspecif... | 48 | 1 | 1 | true | v3 | 0 | [
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},
{
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19,581,033 | 29,967,030 | M | 89 | 2176-11-30 | 0 | WHITE | EW EMER. | EMERGENCY ROOM | SKILLED NURSING FACILITY | [
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] | [
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"Acute on chronic combined systolic and diastolic heart failure",
"Unspecified protein-calorie malnutrition",
"Hyperosmolality and/or hypernatremia",
"Other complications due to other vascular device, implant, and graft",
"Venous th... | [
"Personal history of venous thrombosis and embolism",
"Long-term (current) use of anticoagulants",
"Cardiac pacemaker in situ"
] | [
"Urinary catheterization as the cause of abnormal reaction of patient, or of later complication, without mention of misadventure at time of procedure",
"Anticoagulants causing adverse effects in therapeutic use"
] | Infection and inflammatory reaction due to indwelling urinary catheter | [
"Transfusion of packed cells"
] | [
{
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},
{
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"count": 1,
"dose": "1000",
"unit": "mL",
"route": "IV"
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{
... | [] | [
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] | [
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"UNKNOWN",
"Emergency Department"
] | [
{
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},
{
"description": "OTHER KIDNEY & URINARY TRACT DIAGNOSES W MCC",
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] | [] | 1 | 17 | 3 | 1 | 27 | 0 | 1 | 89M, EW EMER. admission from EMERGENCY ROOM.
OUTCOME: discharged alive to SKILLED NURSING FACILITY
PRESENTING SYMPTOMS: Abnormal coagulation profile
PRIMARY DIAGNOSIS: Infection and inflammatory reaction due to indwelling urinary catheter
ACTIVE DIAGNOSES: Infection and inflammatory reaction due to indwelling urinary c... | [1] The patient is an 89-year-old male presenting from the Emergency Room with an abnormal coagulation profile.
[2] The patient was admitted for an infection and inflammatory reaction due to an indwelling urinary catheter.
[3] The patient has active diagnoses including infection and inflammatory reaction due to an indw... | 10 | 1 | 1 | true | v3 | 0 | [
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{
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13,031,024 | 25,109,445 | F | 42 | 0 | HISPANIC/LATINO - PUERTO RICAN | OBSERVATION ADMIT | PHYSICIAN REFERRAL | SKILLED NURSING FACILITY | ["Other symptoms and signs involving the nervous system","Suicidal ideations","Headache","Unspecifie(...TRUNCATED) | ["Chronic diastolic (congestive) heart failure","Urinary tract infection, site not specified","Acute(...TRUNCATED) | ["Body mass index [BMI] 45.0-49.9, adult","Long term (current) use of insulin","Presence of coronary(...TRUNCATED) | [
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] | Other symptoms and signs involving the nervous system | [] | [{"name":"Ramelteon","count":1,"dose":"8","unit":"mg","route":"PO/NG"},{"name":"Insulin","count":9,"(...TRUNCATED) | [{"specimen":"URINE","organism":"ESCHERICHIA COLI","susceptibilities":[{"antibiotic":"AMPICILLIN","i(...TRUNCATED) | [
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19,454,978 | 26,537,547 | F | 80 | 2148-04-20 | 0 | ASIAN - CHINESE | EW EMER. | EMERGENCY ROOM | HOME HEALTH CARE | [
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] | ["Septicemia due to escherichia coli [E. coli]","Other secondary thrombocytopenia","Urinary tract in(...TRUNCATED) | ["Personal history, urinary (tract) infection","Personal history of pulmonary embolism","Knee joint (...TRUNCATED) | [] | Septicemia due to escherichia coli [E. coli] | [
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] | [{"name":"Heparin","count":1,"dose":"5000","unit":"UNIT","route":"SC"},{"name":"Furosemide","count":(...TRUNCATED) | [{"specimen":"URINE","organism":"PSEUDOMONAS AERUGINOSA","susceptibilities":[{"antibiotic":"GENTAMIC(...TRUNCATED) | [
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17,025,342 | 29,265,685 | M | 54 | 2173-03-03 | 0 | WHITE | EW EMER. | EMERGENCY ROOM | REHAB | [
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15,874,847 | 26,719,413 | M | 64 | 0 | HISPANIC OR LATINO | EW EMER. | EMERGENCY ROOM | HOME | [] | ["Obstructive chronic bronchitis with (acute) exacerbation","Chronic respiratory failure","Hyperosmo(...TRUNCATED) | ["Other dependence on machines, supplemental oxygen","Personal history of tobacco use","Personal his(...TRUNCATED) | [
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] | Obstructive chronic bronchitis with (acute) exacerbation | [] | [{"name":"PredniSONE","count":8,"dose":"5","unit":"mg","route":"PO"},{"name":"Albuterol 0.083% Neb S(...TRUNCATED) | [] | [
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"UNKNOWN",
"Emergency Department"
] | [{"description":"CHRONIC OBSTRUCTIVE PULMONARY DISEASE","severity":"3","mortality":"3"},{"descriptio(...TRUNCATED) | [] | 0 | 12 | 4 | 0 | 13 | 0 | 1 | "64M, EW EMER. admission from EMERGENCY ROOM.\nOUTCOME: discharged alive to HOME\nPRESENTING SYMPTOM(...TRUNCATED) | "[1] The patient is a 64-year-old male admitted from the Emergency Room.\n[2] The patient's presenti(...TRUNCATED) | 11 | 1 | 1 | true | v3 | 0 | [{"id":"N_000","type":"PATIENT","name":"patient_15874847","normalized_name":"patient_15874847"},{"id(...TRUNCATED) | [{"source":"N_000","target":"N_001","relation":"HAS_DIAGNOSIS","confidence":1.0,"evidence":"structur(...TRUNCATED) | 31 | 30 | [-0.384995,-0.065715,-0.01772,0.392158,-0.386194,-0.017589,0.836005,0.48526,-0.193117,-0.626647,0.44(...TRUNCATED) | Simonlee711/Clinical_ModernBERT | 768 | |
13,588,636 | 29,985,152 | F | 54 | 2142-03-22 | 0 | WHITE | OBSERVATION ADMIT | TRANSFER FROM HOSPITAL | REHAB | [
"Unspecified convulsions"
] | ["Ulcer of esophagus with bleeding","Acute kidney failure, unspecified","Alkalosis","Hypo-osmolality(...TRUNCATED) | ["Personal history of nicotine dependence","Body mass index [BMI] 32.0-32.9, adult","Long term (curr(...TRUNCATED) | [] | Ulcer of esophagus with bleeding | ["Excision of Lower Esophagus, Via Natural or Artificial Opening Endoscopic, Diagnostic","Introducti(...TRUNCATED) | [{"name":"LevETIRAcetam","count":2,"dose":"1000","unit":"mg","route":"PO"},{"name":"LACOSamide","cou(...TRUNCATED) | [
{
"specimen": "URINE",
"organism": "YEAST",
"susceptibilities": []
}
] | [
"MED"
] | [
"UNKNOWN",
"Medicine"
] | [{"description":"OTHER ESOPHAGEAL DISORDERS","severity":"3","mortality":"3"},{"description":"COMPLIC(...TRUNCATED) | [] | 1 | 14 | 7 | 2 | 25 | 1 | 1 | "54F, OBSERVATION ADMIT admission from TRANSFER FROM HOSPITAL.\nOUTCOME: discharged alive to REHAB\n(...TRUNCATED) | "[1] The patient presented with unspecified convulsions.\n[2] The primary diagnosis was ulcer of eso(...TRUNCATED) | 9 | 1 | 1 | true | v3 | 0 | [{"id":"N_000","type":"PATIENT","name":"patient_13588636","normalized_name":"patient_13588636"},{"id(...TRUNCATED) | [{"source":"N_000","target":"N_001","relation":"HAS_DIAGNOSIS","confidence":1.0,"evidence":"structur(...TRUNCATED) | 52 | 51 | [-0.334874,0.050755,0.024468,0.333657,-0.527764,0.23186,1.004396,0.39316,-0.095182,-0.714535,0.46341(...TRUNCATED) | Simonlee711/Clinical_ModernBERT | 768 |
End of preview. Expand in Data Studio
Fawkes — WM@Booth Training Graphs (v16 dataset) — PRIVATE
PRIVATE — derived from MIMIC-IV (PhysioNet credentialed, governed by the PhysioNet DUA). Do not redistribute. Credentialed access only.
The exact dataset the WM@Booth Graph-JEPA v16 model (on1onmangoes/fawkes-wmatbooth-graph-jepa-v16-260615) was trained on — 4,000 per-admission clinical knowledge graphs (~3,018 patients).
Each record = one hospital admission
| field | what it is |
|---|---|
subject_id, hadm_id |
MIMIC identifiers · plus demographics (gender, anchor_age) |
note |
the real MIMIC-IV discharge note |
note_embedding |
768-d, mean-pooled Clinical-ModernBERT (Simonlee711/Clinical_ModernBERT) vector of the note |
nodes |
typed entities: PATIENT, DIAGNOSIS, MEDICATION, MICROBIOLOGY, PROCEDURE, SERVICE, LAB_TEST, PROCUREMENT |
edges |
deterministic backbone (HAS_DIAGNOSIS, TAKES_MEDICATION, UNDERWENT_PROCEDURE, … — confidence 1.0) + 4-agent inferred edges (MANAGED_FOR, CONFIRMS, COMPLICATED_BY, INDICATES), each with per-edge v8 deterministic scores in labels (drug↔dx cosine, RxNav/MED-RT treats, OMOP closeness, prov_in_note, …) |
How it was built
notes → 27B graph (4 specialist agents reading the note) + deterministic MIMIC backbone → v8 deterministic edge scoring → Clinical-ModernBERT note embedding. One consolidated, scored graph per admission.
Used by
on1onmangoes/fawkes-wmatbooth-graph-jepa-v16-260615 — the v16 entity-grounded-note Graph-JEPA world model. The note embedding here rides on the entities the note grounds (prov_in_note), which roughly doubled inferred-edge recovery (LOO MRR 0.281 → 0.419).
Part of the Fawkes project — WM@Booth (Workshop on World Models, Chicago Booth). Generated 260615.
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