Update README.md
Browse files
README.md
CHANGED
|
@@ -40,9 +40,10 @@ This dataset contains datas being collected from Genbank. The dataset is organiz
|
|
| 40 |
```python
|
| 41 |
{DNA id: AP013063.1
|
| 42 |
Organism: Serratia marcescens SM39
|
| 43 |
-
year:
|
| 44 |
region type:coding
|
| 45 |
-
|
|
|
|
| 46 |
sequence: ATGCGCAACATCAGCCTGAAAACCACAATTATTACCACCACCGATACCACAGGTAACGGGGCGGGCTGA
|
| 47 |
gc_content:0.52173913
|
| 48 |
translation code: MRNISLKTTIITTTDTTGNGAG}
|
|
@@ -51,9 +52,10 @@ translation code: MRNISLKTTIITTTDTTGNGAG}
|
|
| 51 |
### Data Fields
|
| 52 |
__DNA id__: id number for the whole DNA sequence, sequences with same DNA id are from same DNA
|
| 53 |
__Organism__: Organism of the DNA
|
| 54 |
-
|
| 55 |
-
__region type__: determine
|
| 56 |
-
|
|
|
|
| 57 |
__sequence__: the actual sequence
|
| 58 |
__gc_content__: the gc_content of the sequence
|
| 59 |
__translation code__: if the sequence produce protein, then the translation code would be provided as a reference
|
|
|
|
| 40 |
```python
|
| 41 |
{DNA id: AP013063.1
|
| 42 |
Organism: Serratia marcescens SM39
|
| 43 |
+
year: 2017
|
| 44 |
region type:coding
|
| 45 |
+
specific_class: Protein
|
| 46 |
+
Product:thr operon leader peptide
|
| 47 |
sequence: ATGCGCAACATCAGCCTGAAAACCACAATTATTACCACCACCGATACCACAGGTAACGGGGCGGGCTGA
|
| 48 |
gc_content:0.52173913
|
| 49 |
translation code: MRNISLKTTIITTTDTTGNGAG}
|
|
|
|
| 52 |
### Data Fields
|
| 53 |
__DNA id__: id number for the whole DNA sequence, sequences with same DNA id are from same DNA
|
| 54 |
__Organism__: Organism of the DNA
|
| 55 |
+
__year__: the year of the DNA sequence
|
| 56 |
+
__region type__: determine the general type of the sequence, such as coding, regulator, repeat region, etc.
|
| 57 |
+
__specific class__: if the sequence is coding sequence, it would be classified according to their production type such as RNA, Protein. The regulators would also be classified by their own class such as terminator, ribosome
|
| 58 |
+
__Product__ : if the sequence produce protein, the product name would be listed
|
| 59 |
__sequence__: the actual sequence
|
| 60 |
__gc_content__: the gc_content of the sequence
|
| 61 |
__translation code__: if the sequence produce protein, then the translation code would be provided as a reference
|