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.gitattributes
CHANGED
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@@ -62,3 +62,4 @@ data/ref_global_cell_state_manifold.h5ad filter=lfs diff=lfs merge=lfs -text
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data/tutorial_data/Tabula_Sapiens_HS_2022_all_subsample.h5ad filter=lfs diff=lfs merge=lfs -text
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data/tutorial_data/Travaglini_Lung_HS_2021_10x_subsample.h5ad filter=lfs diff=lfs merge=lfs -text
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data/tutorial_data/Treutlein_2016_neuron_transdifferentiation.h5ad filter=lfs diff=lfs merge=lfs -text
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data/tutorial_data/Tabula_Sapiens_HS_2022_all_subsample.h5ad filter=lfs diff=lfs merge=lfs -text
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data/tutorial_data/Travaglini_Lung_HS_2021_10x_subsample.h5ad filter=lfs diff=lfs merge=lfs -text
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data/tutorial_data/Treutlein_2016_neuron_transdifferentiation.h5ad filter=lfs diff=lfs merge=lfs -text
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+
data/tutorial_data/AdamsonWeissman2016_GSM2406681_10X010.h5ad filter=lfs diff=lfs merge=lfs -text
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data/tutorial_data/AdamsonWeissman2016_GSM2406681_10X010.h5ad
ADDED
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@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:e70fcd49808cab8d724de8d5a332940911206e1c8ef44cc7b568d048ed795c85
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size 471286951
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data/tutorial_data/gene_exp_program_annotation.csv
ADDED
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The diff for this file is too large to render.
See raw diff
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data/tutorial_data/perturbation_cluster_annotation.csv
ADDED
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@@ -0,0 +1,555 @@
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| 1 |
+
,perturbed_gene_name,cluster_name
|
| 2 |
+
ENSG00000001497,LAS1L,ribosome large unit biogenesis
|
| 3 |
+
ENSG00000005007,UPF1,histone acetylation
|
| 4 |
+
ENSG00000005100,DHX33,rRNA processing 1
|
| 5 |
+
ENSG00000005194,CIAPIN1,ribosome large unit protein
|
| 6 |
+
ENSG00000008988,RPS20,ribosome small unit biogenesis
|
| 7 |
+
ENSG00000013275,PSMC4,proteasome
|
| 8 |
+
ENSG00000014123,UFL1,chromatin organization
|
| 9 |
+
ENSG00000014138,POLA2,DNA replication
|
| 10 |
+
ENSG00000014919,COX15,mitochondrion organization
|
| 11 |
+
ENSG00000015676,NUDCD3,protein neddylation
|
| 12 |
+
ENSG00000020426,MNAT1,pol II transcription
|
| 13 |
+
ENSG00000023734,STRAP,translation initiation
|
| 14 |
+
ENSG00000035141,FAM136A,mediator complex
|
| 15 |
+
ENSG00000035928,RFC1,DNA replication
|
| 16 |
+
ENSG00000041357,PSMA4,proteasome
|
| 17 |
+
ENSG00000041802,LSG1,rRNA processing 2
|
| 18 |
+
ENSG00000042429,MED17,mediator complex
|
| 19 |
+
ENSG00000044574,HSPA5,protein processing in ER
|
| 20 |
+
ENSG00000047315,POLR2B,pol II transcription
|
| 21 |
+
ENSG00000048162,NOP16,ribosome large unit biogenesis
|
| 22 |
+
ENSG00000049541,RFC2,DNA replication
|
| 23 |
+
ENSG00000051180,RAD51,DNA replication
|
| 24 |
+
ENSG00000051596,THOC3,RNA metabolism
|
| 25 |
+
ENSG00000052749,RRP12,rRNA processing 1
|
| 26 |
+
ENSG00000055044,NOP58,rRNA processing 1
|
| 27 |
+
ENSG00000055950,MRPL43,mitochondrial translation
|
| 28 |
+
ENSG00000058729,RIOK2,ribosome small unit biogenesis
|
| 29 |
+
ENSG00000061794,MRPS35,mitochondrial translation
|
| 30 |
+
ENSG00000061936,SFSWAP,spliceosome
|
| 31 |
+
ENSG00000062822,POLD1,DNA replication
|
| 32 |
+
ENSG00000063177,RPL18,ribosome large unit protein
|
| 33 |
+
ENSG00000063244,U2AF2,spliceosome
|
| 34 |
+
ENSG00000063322,MED29,mediator complex
|
| 35 |
+
ENSG00000064313,TAF2,transcription initiation
|
| 36 |
+
ENSG00000064419,TNPO3,CCT complex
|
| 37 |
+
ENSG00000064703,DDX20,spliceosome
|
| 38 |
+
ENSG00000065183,WDR3,rRNA processing 1
|
| 39 |
+
ENSG00000065328,MCM10,DNA replication
|
| 40 |
+
ENSG00000067334,DNTTIP2,ribosome small unit biogenesis
|
| 41 |
+
ENSG00000067704,IARS2,mitochondrion organization
|
| 42 |
+
ENSG00000068654,POLR1A,rRNA processing 2
|
| 43 |
+
ENSG00000070785,EIF2B3,Recycling Of eIF2:GDP
|
| 44 |
+
ENSG00000071082,RPL31,ribosome large unit protein
|
| 45 |
+
ENSG00000072501,SMC1A,mediator complex
|
| 46 |
+
ENSG00000072849,DERL2,protein processing in ER
|
| 47 |
+
ENSG00000073111,MCM2,DNA replication
|
| 48 |
+
ENSG00000073536,NLE1,ribosome large unit biogenesis
|
| 49 |
+
ENSG00000074201,CLNS1A,spliceosome
|
| 50 |
+
ENSG00000074319,TSG101,membrane fission
|
| 51 |
+
ENSG00000075089,ACTR6,histone acetylation
|
| 52 |
+
ENSG00000075624,ACTB,chromatin organization
|
| 53 |
+
ENSG00000075856,SART3,spliceosome
|
| 54 |
+
ENSG00000076003,MCM6,DNA replication
|
| 55 |
+
ENSG00000076043,REXO2,mitochondrial transcription
|
| 56 |
+
ENSG00000077514,POLD3,DNA replication
|
| 57 |
+
ENSG00000079246,XRCC5,translation initiation
|
| 58 |
+
ENSG00000082516,GEMIN5,spliceosome
|
| 59 |
+
ENSG00000084463,WBP11,spliceosome
|
| 60 |
+
ENSG00000085840,ORC1,DNA replication
|
| 61 |
+
ENSG00000086189,DIMT1,ribosome small unit biogenesis
|
| 62 |
+
ENSG00000086758,HUWE1,DNA replication
|
| 63 |
+
ENSG00000087263,OGFOD1,CCT complex
|
| 64 |
+
ENSG00000088038,CNOT3,integrator complex
|
| 65 |
+
ENSG00000088205,DDX18,ribosome small unit biogenesis
|
| 66 |
+
ENSG00000088325,TPX2,DNA replication
|
| 67 |
+
ENSG00000088356,PDRG1,pol II transcription
|
| 68 |
+
ENSG00000089009,RPL6,ribosome large unit protein
|
| 69 |
+
ENSG00000089048,ESF1,ribosome small unit biogenesis
|
| 70 |
+
ENSG00000089157,RPLP0,ribosome large unit protein
|
| 71 |
+
ENSG00000089289,IGBP1,membrane fission
|
| 72 |
+
ENSG00000089737,DDX24,ribosome large unit biogenesis
|
| 73 |
+
ENSG00000092199,HNRNPC,DNA replication
|
| 74 |
+
ENSG00000092201,SUPT16H,pol II enlongation
|
| 75 |
+
ENSG00000096080,MRPS18A,mitochondrial translation
|
| 76 |
+
ENSG00000099800,TIMM13,mitochondrion organization
|
| 77 |
+
ENSG00000099821,POLRMT,mitochondrial transcription
|
| 78 |
+
ENSG00000100028,SNRPD3,spliceosome
|
| 79 |
+
ENSG00000100029,PES1,ribosome large unit biogenesis
|
| 80 |
+
ENSG00000100142,POLR2F,pol II transcription
|
| 81 |
+
ENSG00000100216,TOMM22,mitochondrion organization
|
| 82 |
+
ENSG00000100316,RPL3,ribosome large unit biogenesis
|
| 83 |
+
ENSG00000100319,ZMAT5,RNA metabolism
|
| 84 |
+
ENSG00000100347,SAMM50,mitochondrion organization
|
| 85 |
+
ENSG00000100353,EIF3D,translation initiation
|
| 86 |
+
ENSG00000100401,RANGAP1,RNA metabolism
|
| 87 |
+
ENSG00000100410,PHF5A,spliceosome
|
| 88 |
+
ENSG00000100519,PSMC6,proteasome
|
| 89 |
+
ENSG00000100567,PSMA3,proteasome
|
| 90 |
+
ENSG00000100697,DICER1,mRNA surveillance
|
| 91 |
+
ENSG00000100764,PSMC1,proteasome
|
| 92 |
+
ENSG00000100836,PABPN1,RNA degradation
|
| 93 |
+
ENSG00000101146,RAE1,rRNA processing 2
|
| 94 |
+
ENSG00000101158,NELFCD,transcription initiation
|
| 95 |
+
ENSG00000101161,PRPF6,spliceosome
|
| 96 |
+
ENSG00000101166,PRELID3B,mitochondrion organization
|
| 97 |
+
ENSG00000101189,MRGBP,histone acetylation
|
| 98 |
+
ENSG00000101444,AHCY,mitochondrial transcription
|
| 99 |
+
ENSG00000101654,RNMT,mRNA surveillance
|
| 100 |
+
ENSG00000102978,POLR2C,pol II transcription
|
| 101 |
+
ENSG00000103035,PSMD7,proteasome
|
| 102 |
+
ENSG00000103257,SLC7A5,mitochondrial translation
|
| 103 |
+
ENSG00000103275,UBE2I,Recycling Of eIF2:GDP
|
| 104 |
+
ENSG00000103423,DNAJA3,mitochondrion organization
|
| 105 |
+
ENSG00000103510,KAT8,histone acetylation
|
| 106 |
+
ENSG00000103932,RPAP1,pol II transcription
|
| 107 |
+
ENSG00000104299,INTS9,spliceosome
|
| 108 |
+
ENSG00000104356,POP1,rRNA processing 1
|
| 109 |
+
ENSG00000104408,EIF3E,translation initiation
|
| 110 |
+
ENSG00000104824,HNRNPL,mitochondrion organization
|
| 111 |
+
ENSG00000104852,SNRNP70,spliceosome
|
| 112 |
+
ENSG00000104884,ERCC2,pol II transcription
|
| 113 |
+
ENSG00000104897,SF3A2,spliceosome
|
| 114 |
+
ENSG00000105058,FAM32A,spliceosome
|
| 115 |
+
ENSG00000105171,POP4,rRNA processing 1
|
| 116 |
+
ENSG00000105254,TBCB,CCT complex
|
| 117 |
+
ENSG00000105258,POLR2I,pol II transcription
|
| 118 |
+
ENSG00000105372,RPS19,ribosome small unit protein
|
| 119 |
+
ENSG00000105705,SUGP1,transcription initiation
|
| 120 |
+
ENSG00000105819,PMPCB,mitochondrion organization
|
| 121 |
+
ENSG00000105879,CBLL1,RNA methylation
|
| 122 |
+
ENSG00000106028,SSBP1,mitochondrial transcription
|
| 123 |
+
ENSG00000106246,PTCD1,mitochondrial translation
|
| 124 |
+
ENSG00000106290,TAF6,transcription initiation
|
| 125 |
+
ENSG00000106355,LSM5,spliceosome
|
| 126 |
+
ENSG00000106399,RPA3,DNA replication
|
| 127 |
+
ENSG00000106628,POLD2,DNA replication
|
| 128 |
+
ENSG00000107371,EXOSC3,rRNA processing 2
|
| 129 |
+
ENSG00000107581,EIF3A,translation initiation
|
| 130 |
+
ENSG00000107862,GBF1,protein processing in ER
|
| 131 |
+
ENSG00000107951,MTPAP,mitochondrial transcription
|
| 132 |
+
ENSG00000108064,TFAM,mitochondrial transcription
|
| 133 |
+
ENSG00000108298,RPL19,ribosome large unit protein
|
| 134 |
+
ENSG00000108506,INTS2,integrator complex
|
| 135 |
+
ENSG00000108561,C1QBP,chromatin organization
|
| 136 |
+
ENSG00000108651,UTP6,ribosome small unit biogenesis
|
| 137 |
+
ENSG00000108654,DDX5,histone acetylation
|
| 138 |
+
ENSG00000108671,PSMD11,proteasome
|
| 139 |
+
ENSG00000108826,MRPL27,mitochondrial translation
|
| 140 |
+
ENSG00000109111,SUPT6H,mediator complex
|
| 141 |
+
ENSG00000109475,RPL34,ribosome large unit protein
|
| 142 |
+
ENSG00000109519,GRPEL1,mitochondrion organization
|
| 143 |
+
ENSG00000109606,DHX15,spliceosome
|
| 144 |
+
ENSG00000110104,CCDC86,ribosome large unit biogenesis
|
| 145 |
+
ENSG00000110107,PRPF19,spliceosome
|
| 146 |
+
ENSG00000110367,DDX6,mediator complex
|
| 147 |
+
ENSG00000110768,GTF2H1,pol II transcription
|
| 148 |
+
ENSG00000111142,METAP2,mitochondrion organization
|
| 149 |
+
ENSG00000111231,GPN3,pol II transcription
|
| 150 |
+
ENSG00000111300,NAA25,mediator complex
|
| 151 |
+
ENSG00000111361,EIF2B1,Recycling Of eIF2:GDP
|
| 152 |
+
ENSG00000111364,DDX55,rRNA processing 2
|
| 153 |
+
ENSG00000111581,NUP107,RNA metabolism
|
| 154 |
+
ENSG00000111596,CNOT2,integrator complex
|
| 155 |
+
ENSG00000111605,CPSF6,CCT complex
|
| 156 |
+
ENSG00000111615,KRR1,ribosome small unit biogenesis
|
| 157 |
+
ENSG00000112110,MRPL18,mitochondrial translation
|
| 158 |
+
ENSG00000112118,MCM3,DNA replication
|
| 159 |
+
ENSG00000112306,RPS12,ribosome small unit biogenesis
|
| 160 |
+
ENSG00000112339,HBS1L,Recycling Of eIF2:GDP
|
| 161 |
+
ENSG00000112578,BYSL,rRNA processing 1
|
| 162 |
+
ENSG00000112592,TBP,rRNA processing 2
|
| 163 |
+
ENSG00000112651,MRPL2,mitochondrial translation
|
| 164 |
+
ENSG00000112739,PRPF4B,spliceosome
|
| 165 |
+
ENSG00000112983,BRD8,histone acetylation
|
| 166 |
+
ENSG00000112984,KIF20A,histone acetylation
|
| 167 |
+
ENSG00000113013,HSPA9,mitochondrion organization
|
| 168 |
+
ENSG00000113460,BRIX1,mediator complex
|
| 169 |
+
ENSG00000113649,TCERG1,mitochondrion organization
|
| 170 |
+
ENSG00000113734,BNIP1,protein processing in ER
|
| 171 |
+
ENSG00000113812,ACTR8,chromatin organization
|
| 172 |
+
ENSG00000114391,RPL24,ribosome large unit protein
|
| 173 |
+
ENSG00000114503,NCBP2,mRNA surveillance
|
| 174 |
+
ENSG00000114686,MRPL3,mitochondrial translation
|
| 175 |
+
ENSG00000114767,RRP9,rRNA processing 1
|
| 176 |
+
ENSG00000114867,EIF4G1,translation initiation
|
| 177 |
+
ENSG00000114982,KANSL3,histone acetylation
|
| 178 |
+
ENSG00000115211,EIF2B4,Recycling Of eIF2:GDP
|
| 179 |
+
ENSG00000115216,NRBP1,mediator complex
|
| 180 |
+
ENSG00000115274,INO80B,transcription initiation
|
| 181 |
+
ENSG00000115364,MRPL19,mitochondrial translation
|
| 182 |
+
ENSG00000115368,WDR75,rRNA processing 2
|
| 183 |
+
ENSG00000115484,CCT4,CCT complex
|
| 184 |
+
ENSG00000115540,MOB4,RNA metabolism
|
| 185 |
+
ENSG00000115561,CHMP3,membrane fission
|
| 186 |
+
ENSG00000115816,CEBPZ,rRNA processing 2
|
| 187 |
+
ENSG00000115875,SRSF7,pol II enlongation
|
| 188 |
+
ENSG00000115946,PNO1,ribosome small unit biogenesis
|
| 189 |
+
ENSG00000116120,FARSB,mitochondrion organization
|
| 190 |
+
ENSG00000116221,MRPL37,mitochondrial translation
|
| 191 |
+
ENSG00000116752,BCAS2,spliceosome
|
| 192 |
+
ENSG00000116809,ZBTB17,chromatin organization
|
| 193 |
+
ENSG00000117133,RPF1,ribosome large unit biogenesis
|
| 194 |
+
ENSG00000117174,ZNHIT6,rRNA processing 1
|
| 195 |
+
ENSG00000117395,EBNA1BP2,ribosome large unit biogenesis
|
| 196 |
+
ENSG00000117614,SYF2,spliceosome
|
| 197 |
+
ENSG00000117682,DHDDS,protein processing in ER
|
| 198 |
+
ENSG00000117748,RPA2,DNA replication
|
| 199 |
+
ENSG00000118412,CASP8AP2,DNA replication
|
| 200 |
+
ENSG00000118579,MED28,mediator complex
|
| 201 |
+
ENSG00000119203,CPSF3,mRNA Polyadenylation
|
| 202 |
+
ENSG00000119285,HEATR1,rRNA processing 2
|
| 203 |
+
ENSG00000119523,ALG2,protein processing in ER
|
| 204 |
+
ENSG00000119616,FCF1,ribosome small unit biogenesis
|
| 205 |
+
ENSG00000119718,EIF2B2,Recycling Of eIF2:GDP
|
| 206 |
+
ENSG00000119720,NRDE2,spliceosome
|
| 207 |
+
ENSG00000120158,RCL1,ribosome small unit biogenesis
|
| 208 |
+
ENSG00000120333,MRPS14,mitochondrial translation
|
| 209 |
+
ENSG00000120656,TAF12,transcription initiation
|
| 210 |
+
ENSG00000120699,EXOSC8,RNA degradation
|
| 211 |
+
ENSG00000120705,ETF1,Recycling Of eIF2:GDP
|
| 212 |
+
ENSG00000120800,UTP20,ribosome small unit biogenesis
|
| 213 |
+
ENSG00000122026,RPL21,ribosome large unit protein
|
| 214 |
+
ENSG00000122257,RBBP6,mediator complex
|
| 215 |
+
ENSG00000122406,RPL5,ribosome large unit protein
|
| 216 |
+
ENSG00000122484,RPAP2,pol II transcription
|
| 217 |
+
ENSG00000122882,ECD,spliceosome
|
| 218 |
+
ENSG00000124571,XPO5,mRNA surveillance
|
| 219 |
+
ENSG00000124614,RPS10,ribosome small unit biogenesis
|
| 220 |
+
ENSG00000124641,MED20,mediator complex
|
| 221 |
+
ENSG00000124784,RIOK1,ribosome small unit biogenesis
|
| 222 |
+
ENSG00000125107,CNOT1,integrator complex
|
| 223 |
+
ENSG00000125352,RNF113A,spliceosome
|
| 224 |
+
ENSG00000125630,POLR1B,rRNA processing 2
|
| 225 |
+
ENSG00000125686,MED1,mediator complex
|
| 226 |
+
ENSG00000125691,RPL23,ribosome large unit protein
|
| 227 |
+
ENSG00000125755,SYMPK,mRNA Polyadenylation
|
| 228 |
+
ENSG00000125977,EIF2S2,mitochondrion organization
|
| 229 |
+
ENSG00000125995,ROMO1,mitochondrion organization
|
| 230 |
+
ENSG00000126254,RBM42,spliceosome
|
| 231 |
+
ENSG00000126261,UBA2,Recycling Of eIF2:GDP
|
| 232 |
+
ENSG00000126698,DNAJC8,chromatin organization
|
| 233 |
+
ENSG00000126756,UXT,pol II transcription
|
| 234 |
+
ENSG00000126814,TRMT5,mitochondrion organization
|
| 235 |
+
ENSG00000127337,YEATS4,histone acetylation
|
| 236 |
+
ENSG00000127554,GFER,mitochondrion organization
|
| 237 |
+
ENSG00000127837,AAMP,ribosome large unit biogenesis
|
| 238 |
+
ENSG00000128908,INO80,chromatin organization
|
| 239 |
+
ENSG00000129347,KRI1,rRNA processing 1
|
| 240 |
+
ENSG00000129559,NEDD8,chromatin organization
|
| 241 |
+
ENSG00000129932,DOHH,mediator complex
|
| 242 |
+
ENSG00000129933,MAU2,mediator complex
|
| 243 |
+
ENSG00000130255,RPL36,ribosome large unit protein
|
| 244 |
+
ENSG00000130332,LSM7,spliceosome
|
| 245 |
+
ENSG00000130713,EXOSC2,RNA degradation
|
| 246 |
+
ENSG00000130724,CHMP2A,membrane fission
|
| 247 |
+
ENSG00000130741,EIF2S3,Recycling Of eIF2:GDP
|
| 248 |
+
ENSG00000130810,PPAN,ribosome large unit biogenesis
|
| 249 |
+
ENSG00000130826,DKC1,rRNA processing 1
|
| 250 |
+
ENSG00000130935,NOL11,rRNA processing 2
|
| 251 |
+
ENSG00000131013,PPIL4,spliceosome
|
| 252 |
+
ENSG00000131051,RBM39,spliceosome
|
| 253 |
+
ENSG00000131153,GINS2,DNA replication
|
| 254 |
+
ENSG00000131732,ZCCHC9,ribosome small unit biogenesis
|
| 255 |
+
ENSG00000132313,MRPL35,mitochondrial translation
|
| 256 |
+
ENSG00000132382,MYBBP1A,ribosome large unit biogenesis
|
| 257 |
+
ENSG00000132432,SEC61G,protein processing in ER
|
| 258 |
+
ENSG00000132603,NIP7,ribosome large unit biogenesis
|
| 259 |
+
ENSG00000132646,PCNA,DNA replication
|
| 260 |
+
ENSG00000132768,DPH2,translation initiation
|
| 261 |
+
ENSG00000132792,CTNNBL1,spliceosome
|
| 262 |
+
ENSG00000133119,RFC3,DNA replication
|
| 263 |
+
ENSG00000133226,SRRM1,spliceosome
|
| 264 |
+
ENSG00000133398,MED10,mediator complex
|
| 265 |
+
ENSG00000133858,ZFC3H1,RNA degradation
|
| 266 |
+
ENSG00000133997,MED6,mediator complex
|
| 267 |
+
ENSG00000134001,EIF2S1,Recycling Of eIF2:GDP
|
| 268 |
+
ENSG00000134371,CDC73,pol II enlongation
|
| 269 |
+
ENSG00000134419,RPS15A,ribosome small unit biogenesis
|
| 270 |
+
ENSG00000134453,RBM17,CCT complex
|
| 271 |
+
ENSG00000134480,CCNH,pol II transcription
|
| 272 |
+
ENSG00000134597,RBMX2,spliceosome
|
| 273 |
+
ENSG00000134697,GNL2,rRNA processing 2
|
| 274 |
+
ENSG00000134884,ARGLU1,pol II enlongation
|
| 275 |
+
ENSG00000134987,WDR36,ribosome small unit biogenesis
|
| 276 |
+
ENSG00000135521,LTV1,ribosome small unit biogenesis
|
| 277 |
+
ENSG00000135763,URB2,ribosome large unit biogenesis
|
| 278 |
+
ENSG00000136146,MED4,mediator complex
|
| 279 |
+
ENSG00000136271,DDX56,ribosome large unit biogenesis
|
| 280 |
+
ENSG00000136450,SRSF1,histone acetylation
|
| 281 |
+
ENSG00000136518,ACTL6A,histone acetylation
|
| 282 |
+
ENSG00000136527,TRA2B,mitochondrial translation
|
| 283 |
+
ENSG00000136718,IMP4,ribosome small unit biogenesis
|
| 284 |
+
ENSG00000136807,CDK9,transcription initiation
|
| 285 |
+
ENSG00000136891,TEX10,rRNA processing 2
|
| 286 |
+
ENSG00000136897,MRPL50,mitochondrial translation
|
| 287 |
+
ENSG00000136930,PSMB7,proteasome
|
| 288 |
+
ENSG00000137054,POLR1E,rRNA processing 2
|
| 289 |
+
ENSG00000137154,RPS6,ribosome small unit protein
|
| 290 |
+
ENSG00000137200,CMTR1,mRNA surveillance
|
| 291 |
+
ENSG00000137413,TAF8,transcription initiation
|
| 292 |
+
ENSG00000137497,NUMA1,pol II transcription
|
| 293 |
+
ENSG00000137876,RSL24D1,ribosome large unit biogenesis
|
| 294 |
+
ENSG00000138035,PNPT1,mitochondrion organization
|
| 295 |
+
ENSG00000138095,LRPPRC,mitochondrial transcription
|
| 296 |
+
ENSG00000138231,DBR1,spliceosome
|
| 297 |
+
ENSG00000138326,RPS24,ribosome small unit biogenesis
|
| 298 |
+
ENSG00000138442,WDR12,ribosome large unit biogenesis
|
| 299 |
+
ENSG00000138663,COPS4,protein neddylation
|
| 300 |
+
ENSG00000138750,NUP54,RNA metabolism
|
| 301 |
+
ENSG00000139168,ZCRB1,RNA metabolism
|
| 302 |
+
ENSG00000139343,SNRPF,spliceosome
|
| 303 |
+
ENSG00000139620,KANSL2,histone acetylation
|
| 304 |
+
ENSG00000139697,SBNO1,chromatin organization
|
| 305 |
+
ENSG00000139726,DENR,RNA methylation
|
| 306 |
+
ENSG00000140259,MFAP1,spliceosome
|
| 307 |
+
ENSG00000140307,GTF2A2,rRNA processing 2
|
| 308 |
+
ENSG00000140988,RPS2,ribosome small unit protein
|
| 309 |
+
ENSG00000141030,COPS3,protein neddylation
|
| 310 |
+
ENSG00000141456,PELP1,rRNA processing 2
|
| 311 |
+
ENSG00000142230,SAE1,Recycling Of eIF2:GDP
|
| 312 |
+
ENSG00000142534,RPS11,ribosome small unit biogenesis
|
| 313 |
+
ENSG00000142657,PGD,mitochondrial translation
|
| 314 |
+
ENSG00000142676,RPL11,ribosome large unit protein
|
| 315 |
+
ENSG00000142864,SERBP1,chromatin organization
|
| 316 |
+
ENSG00000143256,PFDN2,pol II transcription
|
| 317 |
+
ENSG00000143314,MRPL24,mitochondrial translation
|
| 318 |
+
ENSG00000143493,INTS7,integrator complex
|
| 319 |
+
ENSG00000143624,INTS3,spliceosome
|
| 320 |
+
ENSG00000143748,NVL,ribosome large unit biogenesis
|
| 321 |
+
ENSG00000143977,SNRPG,spliceosome
|
| 322 |
+
ENSG00000144028,SNRNP200,spliceosome
|
| 323 |
+
ENSG00000144713,RPL32,ribosome large unit protein
|
| 324 |
+
ENSG00000144744,UBA3,chromatin organization
|
| 325 |
+
ENSG00000145191,EIF2B5,Recycling Of eIF2:GDP
|
| 326 |
+
ENSG00000145388,METTL14,RNA methylation
|
| 327 |
+
ENSG00000145425,RPS3A,ribosome small unit biogenesis
|
| 328 |
+
ENSG00000145592,RPL37,ribosome large unit biogenesis
|
| 329 |
+
ENSG00000145734,BDP1,ribosome large unit protein
|
| 330 |
+
ENSG00000145741,BTF3,CCT complex
|
| 331 |
+
ENSG00000145833,DDX46,spliceosome
|
| 332 |
+
ENSG00000146007,ZMAT2,spliceosome
|
| 333 |
+
ENSG00000146109,ABT1,rRNA processing 1
|
| 334 |
+
ENSG00000146143,PRIM2,DNA replication
|
| 335 |
+
ENSG00000146263,MMS22L,DNA replication
|
| 336 |
+
ENSG00000146282,RARS2,mitochondrial translation
|
| 337 |
+
ENSG00000147133,TAF1,transcription initiation
|
| 338 |
+
ENSG00000147403,RPL10,ribosome large unit protein
|
| 339 |
+
ENSG00000147416,ATP6V1B2,mitochondrion organization
|
| 340 |
+
ENSG00000147536,GINS4,DNA replication
|
| 341 |
+
ENSG00000147586,MRPS28,mitochondrial translation
|
| 342 |
+
ENSG00000147604,RPL7,ribosome large unit protein
|
| 343 |
+
ENSG00000147677,EIF3H,translation initiation
|
| 344 |
+
ENSG00000147679,UTP23,rRNA processing 1
|
| 345 |
+
ENSG00000148296,SURF6,ribosome large unit biogenesis
|
| 346 |
+
ENSG00000148297,MED22,mediator complex
|
| 347 |
+
ENSG00000148688,RPP30,rRNA processing 1
|
| 348 |
+
ENSG00000148840,PPRC1,mRNA surveillance
|
| 349 |
+
ENSG00000149084,HSD17B12,mitochondrion organization
|
| 350 |
+
ENSG00000149100,EIF3M,translation initiation
|
| 351 |
+
ENSG00000149136,SSRP1,pol II enlongation
|
| 352 |
+
ENSG00000149273,RPS3,ribosome small unit protein
|
| 353 |
+
ENSG00000149923,PPP4C,chromatin organization
|
| 354 |
+
ENSG00000150316,CWC15,spliceosome
|
| 355 |
+
ENSG00000150459,SAP18,mRNA surveillance
|
| 356 |
+
ENSG00000150753,CCT5,CCT complex
|
| 357 |
+
ENSG00000150990,DHX37,rRNA processing 1
|
| 358 |
+
ENSG00000151247,EIF4E,translation initiation
|
| 359 |
+
ENSG00000151304,SRFBP1,rRNA processing 1
|
| 360 |
+
ENSG00000151461,UPF2,chromatin organization
|
| 361 |
+
ENSG00000151657,KIN,spliceosome
|
| 362 |
+
ENSG00000151779,NBAS,protein processing in ER
|
| 363 |
+
ENSG00000151849,CENPJ,rRNA processing 2
|
| 364 |
+
ENSG00000152404,CWF19L2,spliceosome
|
| 365 |
+
ENSG00000153767,GTF2E1,pol II transcription
|
| 366 |
+
ENSG00000154473,BUB3,histone acetylation
|
| 367 |
+
ENSG00000154719,MRPL39,mitochondrial translation
|
| 368 |
+
ENSG00000154743,TSEN2,mitochondrion organization
|
| 369 |
+
ENSG00000154781,CCDC174,spliceosome
|
| 370 |
+
ENSG00000154832,CXXC1,mediator complex
|
| 371 |
+
ENSG00000155438,NIFK,rRNA processing 2
|
| 372 |
+
ENSG00000155463,OXA1L,mitochondrion organization
|
| 373 |
+
ENSG00000155827,RNF20,mediator complex
|
| 374 |
+
ENSG00000155868,MED7,mediator complex
|
| 375 |
+
ENSG00000156239,N6AMT1,chromatin organization
|
| 376 |
+
ENSG00000156261,CCT8,CCT complex
|
| 377 |
+
ENSG00000156482,RPL30,ribosome large unit protein
|
| 378 |
+
ENSG00000156502,SUPV3L1,mitochondrion organization
|
| 379 |
+
ENSG00000156603,MED19,mediator complex
|
| 380 |
+
ENSG00000157778,PSMG3,proteasome
|
| 381 |
+
ENSG00000158042,MRPL17,mitochondrial translation
|
| 382 |
+
ENSG00000158526,TSR2,ribosome small unit protein
|
| 383 |
+
ENSG00000159086,PAXBP1,spliceosome
|
| 384 |
+
ENSG00000159111,MRPL10,mitochondrial translation
|
| 385 |
+
ENSG00000159140,SON,spliceosome
|
| 386 |
+
ENSG00000159147,DONSON,DNA replication
|
| 387 |
+
ENSG00000159259,CHAF1B,DNA replication
|
| 388 |
+
ENSG00000159352,PSMD4,proteasome
|
| 389 |
+
ENSG00000159479,MED8,mediator complex
|
| 390 |
+
ENSG00000159593,NAE1,chromatin organization
|
| 391 |
+
ENSG00000160075,SSU72,mRNA Polyadenylation
|
| 392 |
+
ENSG00000160214,RRP1,ribosome large unit biogenesis
|
| 393 |
+
ENSG00000160294,MCM3AP,RNA metabolism
|
| 394 |
+
ENSG00000160783,PMF1,mediator complex
|
| 395 |
+
ENSG00000160917,CPSF4,mRNA Polyadenylation
|
| 396 |
+
ENSG00000161016,RPL8,ribosome large unit protein
|
| 397 |
+
ENSG00000161057,PSMC2,proteasome
|
| 398 |
+
ENSG00000161920,MED11,mediator complex
|
| 399 |
+
ENSG00000161970,RPL26,ribosome large unit protein
|
| 400 |
+
ENSG00000162385,MAGOH,spliceosome
|
| 401 |
+
ENSG00000162910,MRPL55,mitochondrial translation
|
| 402 |
+
ENSG00000163159,VPS72,histone acetylation
|
| 403 |
+
ENSG00000163468,CCT3,CCT complex
|
| 404 |
+
ENSG00000163528,CHCHD4,mitochondrion organization
|
| 405 |
+
ENSG00000163605,PPP4R2,Recycling Of eIF2:GDP
|
| 406 |
+
ENSG00000163636,PSMD6,proteasome
|
| 407 |
+
ENSG00000163682,RPL9,ribosome large unit protein
|
| 408 |
+
ENSG00000163684,RPP14,rRNA processing 1
|
| 409 |
+
ENSG00000163714,U2SURP,CCT complex
|
| 410 |
+
ENSG00000163811,WDR43,rRNA processing 2
|
| 411 |
+
ENSG00000163872,YEATS2,rRNA processing 2
|
| 412 |
+
ENSG00000163930,BAP1,mitochondrion organization
|
| 413 |
+
ENSG00000163950,SLBP,DNA replication
|
| 414 |
+
ENSG00000164053,ATRIP,pol II enlongation
|
| 415 |
+
ENSG00000164091,WDR82,mediator complex
|
| 416 |
+
ENSG00000164134,NAA15,pol II transcription
|
| 417 |
+
ENSG00000164151,ICE1,spliceosome
|
| 418 |
+
ENSG00000164163,ABCE1,ribosome large unit protein
|
| 419 |
+
ENSG00000164338,UTP15,rRNA processing 2
|
| 420 |
+
ENSG00000164587,RPS14,ribosome small unit protein
|
| 421 |
+
ENSG00000164754,RAD21,mediator complex
|
| 422 |
+
ENSG00000164758,MED30,mediator complex
|
| 423 |
+
ENSG00000164880,INTS1,pol II enlongation
|
| 424 |
+
ENSG00000164902,PHAX,spliceosome
|
| 425 |
+
ENSG00000164941,INTS8,integrator complex
|
| 426 |
+
ENSG00000164975,SNAPC3,spliceosome
|
| 427 |
+
ENSG00000165006,UBAP1,membrane fission
|
| 428 |
+
ENSG00000165417,GTF2A1,rRNA processing 2
|
| 429 |
+
ENSG00000165494,PCF11,mRNA Polyadenylation
|
| 430 |
+
ENSG00000165688,PMPCA,mitochondrion organization
|
| 431 |
+
ENSG00000165732,DDX21,rRNA processing 1
|
| 432 |
+
ENSG00000165819,METTL3,RNA methylation
|
| 433 |
+
ENSG00000166012,TAF1D,rRNA processing 2
|
| 434 |
+
ENSG00000166226,CCT2,CCT complex
|
| 435 |
+
ENSG00000167005,NUDT21,CCT complex
|
| 436 |
+
ENSG00000167088,SNRPD1,spliceosome
|
| 437 |
+
ENSG00000167272,POP5,rRNA processing 1
|
| 438 |
+
ENSG00000167522,ANKRD11,pol II enlongation
|
| 439 |
+
ENSG00000167526,RPL13,ribosome large unit protein
|
| 440 |
+
ENSG00000167881,SRP68,protein processing in ER
|
| 441 |
+
ENSG00000167967,E4F1,proteasome
|
| 442 |
+
ENSG00000167978,SRRM2,protein neddylation
|
| 443 |
+
ENSG00000168028,RPSA,ribosome small unit biogenesis
|
| 444 |
+
ENSG00000168090,COPS6,protein neddylation
|
| 445 |
+
ENSG00000168827,GFM1,mitochondrial translation
|
| 446 |
+
ENSG00000168924,LETM1,mitochondrion organization
|
| 447 |
+
ENSG00000169045,HNRNPH1,chromatin organization
|
| 448 |
+
ENSG00000169375,SIN3A,RNA metabolism
|
| 449 |
+
ENSG00000169564,PCBP1,chromatin organization
|
| 450 |
+
ENSG00000169727,GPS1,protein neddylation
|
| 451 |
+
ENSG00000170312,CDK1,DNA replication
|
| 452 |
+
ENSG00000170322,NFRKB,chromatin organization
|
| 453 |
+
ENSG00000170860,LSM3,spliceosome
|
| 454 |
+
ENSG00000170889,RPS9,ribosome small unit biogenesis
|
| 455 |
+
ENSG00000171148,TADA3,ribosome small unit protein
|
| 456 |
+
ENSG00000171421,MRPL36,mitochondrial translation
|
| 457 |
+
ENSG00000171453,POLR1C,rRNA processing 2
|
| 458 |
+
ENSG00000171858,RPS21,ribosome small unit biogenesis
|
| 459 |
+
ENSG00000171863,RPS7,ribosome small unit biogenesis
|
| 460 |
+
ENSG00000172171,TEFM,mitochondrial transcription
|
| 461 |
+
ENSG00000172172,MRPL13,mitochondrial translation
|
| 462 |
+
ENSG00000172273,HINFP,DNA replication
|
| 463 |
+
ENSG00000172809,RPL38,ribosome large unit protein
|
| 464 |
+
ENSG00000173113,TRMT112,ribosome small unit protein
|
| 465 |
+
ENSG00000173145,NOC3L,ribosome large unit biogenesis
|
| 466 |
+
ENSG00000173418,NAA20,mediator complex
|
| 467 |
+
ENSG00000173674,EIF1AX,translation initiation
|
| 468 |
+
ENSG00000173933,RBM4,integrator complex
|
| 469 |
+
ENSG00000174444,RPL4,ribosome large unit protein
|
| 470 |
+
ENSG00000174748,RPL15,ribosome large unit protein
|
| 471 |
+
ENSG00000174780,SRP72,protein processing in ER
|
| 472 |
+
ENSG00000174953,DHX36,mRNA surveillance
|
| 473 |
+
ENSG00000175054,ATR,pol II enlongation
|
| 474 |
+
ENSG00000175390,EIF3F,translation initiation
|
| 475 |
+
ENSG00000175792,RUVBL1,pol II transcription
|
| 476 |
+
ENSG00000176102,CSTF3,RNA metabolism
|
| 477 |
+
ENSG00000176108,CHMP6,membrane fission
|
| 478 |
+
ENSG00000177084,POLE,DNA replication
|
| 479 |
+
ENSG00000177600,RPLP2,ribosome large unit biogenesis
|
| 480 |
+
ENSG00000177954,RPS27,rRNA processing 1
|
| 481 |
+
ENSG00000178028,DMAP1,histone acetylation
|
| 482 |
+
ENSG00000178105,DDX10,rRNA processing 1
|
| 483 |
+
ENSG00000178896,EXOSC4,rRNA processing 2
|
| 484 |
+
ENSG00000179041,RRS1,rRNA processing 2
|
| 485 |
+
ENSG00000179115,FARSA,Recycling Of eIF2:GDP
|
| 486 |
+
ENSG00000180822,PSMG4,rRNA processing 1
|
| 487 |
+
ENSG00000180992,MRPL14,mitochondrial translation
|
| 488 |
+
ENSG00000181222,POLR2A,pol II transcription
|
| 489 |
+
ENSG00000181817,LSM10,DNA replication
|
| 490 |
+
ENSG00000181938,GINS3,DNA replication
|
| 491 |
+
ENSG00000182004,SNRPE,spliceosome
|
| 492 |
+
ENSG00000182117,NOP10,rRNA processing 1
|
| 493 |
+
ENSG00000182774,RPS17,ribosome small unit biogenesis
|
| 494 |
+
ENSG00000182899,RPL35A,ribosome large unit protein
|
| 495 |
+
ENSG00000183258,DDX41,spliceosome
|
| 496 |
+
ENSG00000183751,TBL3,rRNA processing 1
|
| 497 |
+
ENSG00000184634,MED12,mediator complex
|
| 498 |
+
ENSG00000185049,NELFA,transcription initiation
|
| 499 |
+
ENSG00000185163,DDX51,rRNA processing 2
|
| 500 |
+
ENSG00000185359,HGS,mitochondrion organization
|
| 501 |
+
ENSG00000185627,PSMD13,proteasome
|
| 502 |
+
ENSG00000186468,RPS23,ribosome small unit biogenesis
|
| 503 |
+
ENSG00000187051,RPS19BP1,ribosome small unit biogenesis
|
| 504 |
+
ENSG00000188846,RPL14,ribosome large unit protein
|
| 505 |
+
ENSG00000188986,NELFB,transcription initiation
|
| 506 |
+
ENSG00000196235,SUPT5H,transcription initiation
|
| 507 |
+
ENSG00000196363,WDR5,RNA metabolism
|
| 508 |
+
ENSG00000196365,LONP1,mitochondrion organization
|
| 509 |
+
ENSG00000196504,PRPF40A,histone acetylation
|
| 510 |
+
ENSG00000196531,NACA,pol II transcription
|
| 511 |
+
ENSG00000197170,PSMD12,proteasome
|
| 512 |
+
ENSG00000197265,GTF2E2,pol II transcription
|
| 513 |
+
ENSG00000197756,RPL37A,ribosome large unit protein
|
| 514 |
+
ENSG00000197771,MCMBP,CCT complex
|
| 515 |
+
ENSG00000197958,RPL12,ribosome large unit protein
|
| 516 |
+
ENSG00000198000,NOL8,ribosome large unit biogenesis
|
| 517 |
+
ENSG00000198034,RPS4X,ribosome small unit biogenesis
|
| 518 |
+
ENSG00000198042,MAK16,ribosome large unit biogenesis
|
| 519 |
+
ENSG00000198056,PRIM1,DNA replication
|
| 520 |
+
ENSG00000198176,TFDP1,DNA replication
|
| 521 |
+
ENSG00000198242,RPL23A,ribosome large unit protein
|
| 522 |
+
ENSG00000198258,UBL5,spliceosome
|
| 523 |
+
ENSG00000198301,SDAD1,ribosome large unit biogenesis
|
| 524 |
+
ENSG00000198498,TMA16,ribosome large unit biogenesis
|
| 525 |
+
ENSG00000198522,GPN1,pol II transcription
|
| 526 |
+
ENSG00000198554,WDHD1,DNA replication
|
| 527 |
+
ENSG00000198612,COPS8,protein neddylation
|
| 528 |
+
ENSG00000198730,CTR9,pol II enlongation
|
| 529 |
+
ENSG00000198755,RPL10A,ribosome large unit protein
|
| 530 |
+
ENSG00000198900,TOP1,rRNA processing 2
|
| 531 |
+
ENSG00000198952,SMG5,chromatin organization
|
| 532 |
+
ENSG00000204316,MRPL38,mitochondrial translation
|
| 533 |
+
ENSG00000204356,NELFE,transcription initiation
|
| 534 |
+
ENSG00000204392,LSM2,spliceosome
|
| 535 |
+
ENSG00000204435,CSNK2B,CCT complex
|
| 536 |
+
ENSG00000204619,PPP1R11,mRNA Polyadenylation
|
| 537 |
+
ENSG00000204899,MZT1,DNA replication
|
| 538 |
+
ENSG00000205981,DNAJC19,mitochondrion organization
|
| 539 |
+
ENSG00000213246,SUPT4H1,transcription initiation
|
| 540 |
+
ENSG00000213593,TMX2,mediator complex
|
| 541 |
+
ENSG00000213780,GTF2H4,pol II transcription
|
| 542 |
+
ENSG00000215021,PHB2,mitochondrion organization
|
| 543 |
+
ENSG00000215251,FASTKD5,mitochondrial translation
|
| 544 |
+
ENSG00000217930,PAM16,mitochondrion organization
|
| 545 |
+
ENSG00000223496,EXOSC6,RNA degradation
|
| 546 |
+
ENSG00000227057,WDR46,rRNA processing 1
|
| 547 |
+
ENSG00000233927,RPS28,ribosome small unit biogenesis
|
| 548 |
+
ENSG00000242372,EIF6,rRNA processing 2
|
| 549 |
+
ENSG00000243147,MRPL33,mitochondrial translation
|
| 550 |
+
ENSG00000244038,DDOST,protein processing in ER
|
| 551 |
+
ENSG00000254772,EEF1G,mitochondrion organization
|
| 552 |
+
ENSG00000266472,MRPS21,mitochondrial translation
|
| 553 |
+
ENSG00000273899,NOL12,ribosome large unit biogenesis
|
| 554 |
+
ENSG00000275700,AATF,ribosome small unit biogenesis
|
| 555 |
+
ENSG00000278053,DDX52,rRNA processing 1
|