Dalete S556 dataset
#2
by Yukiko-Ziyu - opened
- .gitattributes +64 -20
- Antitoxin_ParD3_Epistasis_Dataset/Antitoxin_ParD3_Epistasis_Dataset.csv +0 -0
- ArchStabMS1E10_Epistasis_Dataset/ArchStabMS1E10_Epistasis_Dataset.csv +0 -3
- CTXM_Epistasis_Dataset/Doubles_A3_processed.txt +0 -0
- CTXM_Epistasis_Dataset/Doubles_C2_processed.txt +0 -0
- Chitosanase_dTm_Dataset/Chitosanase_dTm_Dataset.csv +0 -14
- Human_Myoglobin_Epistasis_Dataset/Human_Myoglobin_Epistasis_Dataset.csv +0 -0
- {ProteinGym_DMS_Substitutions_Dataset β ProteinGym_DMS_substitutions}/DMS_ProteinGym_substitutions.zip +0 -0
- RBD_ACE2_Dataset/SARS-CoV-2-RBD_DMS_Omicron-EG5-FLip-BA286_bc_binding.csv +0 -3
- RBD_ACE2_Dataset/SARS-CoV-2-RBD_DMS_Omicron-XBB-BQ_bc_binding.csv +0 -3
- RBD_ACE2_Dataset/SARS-CoV-2-RBD_DMS_Omicron_bc_binding.csv +0 -3
- RBD_ACE2_Dataset/SARS-CoV-2-RBD_DMS_variants_bc_binding.csv +0 -3
- RBD_ACE2_Dataset/SARS-CoV-2-RBD_Delta_bc_binding.csv +0 -3
- RBD_Antibody_Dataset/SARS-CoV-2-RBD_MAP_Moderna.csv +0 -3
- RBD_Antibody_Dataset/SARS-CoV-2-RBD_MAP_Rockefeller.csv +0 -3
- RBD_Antibody_Dataset/SARS-CoV-2-RBD_MAP_Vir_mAbs.csv +0 -3
- TrpB_Epistasis_Dataset/TrpB_Epistasis_Dataset.csv +0 -0
- {cDNA_Proteolysis_Dataset β cDNA_proteolysis}/Tsuboyama2023_Dataset2_Dataset3_20230416.csv +0 -0
- {dTm_Dataset β dTm_datasets}/S4346.csv +0 -0
- dTm_datasets/S557.csv +0 -0
- dTm_Dataset/S557.csv β dTm_datasets/S571.csv +0 -0
- {ddG_Dataset β ddG_datasets}/M1261.csv +0 -0
- {ddG_Dataset β ddG_datasets}/S461.csv +0 -0
- {ddG_Dataset β ddG_datasets}/S669.csv +0 -0
- {ddG_Dataset β ddG_datasets}/S783.csv +0 -0
- {ddG_Dataset β ddG_datasets}/S8754.csv +0 -0
- {Human_Domainome_Dataset β human_domainome}/SupplementaryTable2.txt +0 -0
- MGnify_ddG_Dataset/MGnify_ddG_Dataset.csv β human_domainome/SupplementaryTable4.txt +2 -2
- {Human_Domainome_Dataset β human_domainome}/wild_type.fasta +0 -0
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cDNA_proteolysis/Tsuboyama2023_Dataset2_Dataset3_20230416.csv filter=lfs diff=lfs merge=lfs -text
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human_domainome/SupplementaryTable2.txt filter=lfs diff=lfs merge=lfs -text
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human_domainome/SupplementaryTable4.txt filter=lfs diff=lfs merge=lfs -text
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human_domainome/wt.fasta filter=lfs diff=lfs merge=lfs -text
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human_domainome/wild_type.fasta filter=lfs diff=lfs merge=lfs -text
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Antitoxin_ParD3_Epistasis_Dataset/Antitoxin_ParD3_Epistasis_Dataset.csv
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ArchStabMS1E10_Epistasis_Dataset/ArchStabMS1E10_Epistasis_Dataset.csv
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version https://git-lfs.github.com/spec/v1
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oid sha256:40d494ace5da3f6faa180c914ebbcd6e7cdc4847b665c638425fc284f712eadd
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size 95287566
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CTXM_Epistasis_Dataset/Doubles_A3_processed.txt
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CTXM_Epistasis_Dataset/Doubles_C2_processed.txt
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Chitosanase_dTm_Dataset/Chitosanase_dTm_Dataset.csv
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aa_mut,Tm
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"D34N,K166A",61.4
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"D34N,K166A,E83S",62.75
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"D34N,K166A,A196K",61.55
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"D34N,K166A,A196K,E82A,E83S",61.89
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"D34N,K166A,A196K,E82A,E83S,N66G",59.82
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"D34N,K166A,E83S,D173Q,A196S",65.81
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"D34N,K166A,D173S",58.03
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"D34N,K166A,N66S,D173Q",58.21
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WT,58.44
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,
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">wt
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AGLNKDQKRRAEQLTSIFENGTTEIQYGYVERLDDGRGYTCGRAGFTTATGDALEVVEVYTKAVPNNKLKKYLTELRRLAKEESDDTSNLKGFASAWKSLANDKEFRAAQDKVNDHLYYQPAMKRSDNAGLKTALARAVMYDTVIQHGDGDDPDSFYALIKRTNKKAGGSPKDGIDEKKWLNKFLDVRYDDLMNPANHDTRDEWRESVARVDVLRSIAKENNYNLNGPIHVRSNEYGNFVIK",
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Human_Myoglobin_Epistasis_Dataset/Human_Myoglobin_Epistasis_Dataset.csv
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{ProteinGym_DMS_Substitutions_Dataset β ProteinGym_DMS_substitutions}/DMS_ProteinGym_substitutions.zip
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RBD_ACE2_Dataset/SARS-CoV-2-RBD_DMS_Omicron-EG5-FLip-BA286_bc_binding.csv
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RBD_ACE2_Dataset/SARS-CoV-2-RBD_DMS_Omicron-XBB-BQ_bc_binding.csv
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RBD_ACE2_Dataset/SARS-CoV-2-RBD_DMS_Omicron_bc_binding.csv
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RBD_ACE2_Dataset/SARS-CoV-2-RBD_DMS_variants_bc_binding.csv
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RBD_ACE2_Dataset/SARS-CoV-2-RBD_Delta_bc_binding.csv
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RBD_Antibody_Dataset/SARS-CoV-2-RBD_MAP_Moderna.csv
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RBD_Antibody_Dataset/SARS-CoV-2-RBD_MAP_Rockefeller.csv
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RBD_Antibody_Dataset/SARS-CoV-2-RBD_MAP_Vir_mAbs.csv
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TrpB_Epistasis_Dataset/TrpB_Epistasis_Dataset.csv
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{cDNA_Proteolysis_Dataset β cDNA_proteolysis}/Tsuboyama2023_Dataset2_Dataset3_20230416.csv
RENAMED
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{dTm_Dataset β dTm_datasets}/S4346.csv
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dTm_datasets/S557.csv
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dTm_Dataset/S557.csv β dTm_datasets/S571.csv
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{ddG_Dataset β ddG_datasets}/M1261.csv
RENAMED
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{ddG_Dataset β ddG_datasets}/S461.csv
RENAMED
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{ddG_Dataset β ddG_datasets}/S669.csv
RENAMED
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{ddG_Dataset β ddG_datasets}/S783.csv
RENAMED
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{ddG_Dataset β ddG_datasets}/S8754.csv
RENAMED
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{Human_Domainome_Dataset β human_domainome}/SupplementaryTable2.txt
RENAMED
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MGnify_ddG_Dataset/MGnify_ddG_Dataset.csv β human_domainome/SupplementaryTable4.txt
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version https://git-lfs.github.com/spec/v1
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{Human_Domainome_Dataset β human_domainome}/wild_type.fasta
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