| # CORAL Samples |
|
|
| This directory contains a small set of randomly selected sample files from the large-scale [CORAL](https://huggingface.co/datasets/yangzekang2000/CORAL) dataset, a whole-brain neuron tracing benchmark. These samples are provided as lightweight examples for quick inspection, visualization, and testing of different CORAL data types without downloading the full dataset. |
|
|
| ## Directory Structure |
|
|
| ```text |
| CORAL-samples/ |
| ├── cubes-5/ # 5 block-level task samples with 3D cubes, SWC annotations, and mask labels |
| ├── slices-5/ # 5 whole-brain 2D slice image samples |
| └── neuron-swcs-3/ # 3 complete single-neuron SWC annotations |
| ``` |
|
|
| ## Data Description |
|
|
| - `cubes-5/` |
| - Contains 5 examples for CORAL block-level tasks. |
| - Each example includes a 3D cube image block in `.tif` format. |
| - Files with the same basename and the `.swc` extension are the corresponding neuron structure annotations. |
| - Files with the same basename and the `_mask.tif` suffix are the corresponding mask annotations. |
|
|
| - `slices-5/` |
| - Contains 5 randomly selected 2D slices from whole-brain image data in `.tif` format. |
|
|
| - `neuron-swcs-3/` |
| - Contains 3 complete neuron annotations in `.swc` format. |
| - These files provide examples of full-neuron morphology labels from CORAL. |
|
|
| ## Recommended Viewers |
|
|
| - 3D cubes and SWC files: [neuTube](https://www.neutracing.com/) is recommended. |
| - 2D slice data: [Fiji](https://imagej.net/software/fiji/) is recommended. |
|
|
| ## Data Source |
|
|
| These files are only a small sample subset of the CORAL dataset. The full dataset is available at: |
|
|
| https://huggingface.co/datasets/yangzekang2000/CORAL |
|
|