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The dataset generation failed
Error code: DatasetGenerationError
Exception: TypeError
Message: Couldn't cast array of type
struct<unpostedAnnotation: struct<unpostedEvents: list<item: struct<date: string, dateUnknown: bool, type: string>>, unpostedResponsibleParty: string>>
to
{'unpostedAnnotation': {'unpostedEvents': [{'date': Value(dtype='string', id=None), 'dateUnknown': Value(dtype='bool', id=None), 'type': Value(dtype='string', id=None)}], 'unpostedResponsibleParty': Value(dtype='string', id=None)}, 'violationAnnotation': {'violationEvents': [{'creationDate': Value(dtype='string', id=None), 'description': Value(dtype='string', id=None), 'issuedDate': Value(dtype='string', id=None), 'postedDate': Value(dtype='string', id=None), 'releaseDate': Value(dtype='string', id=None), 'type': Value(dtype='string', id=None)}]}}
Traceback: Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2011, in _prepare_split_single
writer.write_table(table)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 585, in write_table
pa_table = table_cast(pa_table, self._schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2302, in table_cast
return cast_table_to_schema(table, schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2261, in cast_table_to_schema
arrays = [cast_array_to_feature(table[name], feature) for name, feature in features.items()]
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2261, in <listcomp>
arrays = [cast_array_to_feature(table[name], feature) for name, feature in features.items()]
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 1802, in wrapper
return pa.chunked_array([func(chunk, *args, **kwargs) for chunk in array.chunks])
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 1802, in <listcomp>
return pa.chunked_array([func(chunk, *args, **kwargs) for chunk in array.chunks])
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2020, in cast_array_to_feature
arrays = [_c(array.field(name), subfeature) for name, subfeature in feature.items()]
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2020, in <listcomp>
arrays = [_c(array.field(name), subfeature) for name, subfeature in feature.items()]
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 1804, in wrapper
return func(array, *args, **kwargs)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2122, in cast_array_to_feature
raise TypeError(f"Couldn't cast array of type\n{_short_str(array.type)}\nto\n{_short_str(feature)}")
TypeError: Couldn't cast array of type
struct<unpostedAnnotation: struct<unpostedEvents: list<item: struct<date: string, dateUnknown: bool, type: string>>, unpostedResponsibleParty: string>>
to
{'unpostedAnnotation': {'unpostedEvents': [{'date': Value(dtype='string', id=None), 'dateUnknown': Value(dtype='bool', id=None), 'type': Value(dtype='string', id=None)}], 'unpostedResponsibleParty': Value(dtype='string', id=None)}, 'violationAnnotation': {'violationEvents': [{'creationDate': Value(dtype='string', id=None), 'description': Value(dtype='string', id=None), 'issuedDate': Value(dtype='string', id=None), 'postedDate': Value(dtype='string', id=None), 'releaseDate': Value(dtype='string', id=None), 'type': Value(dtype='string', id=None)}]}}
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1524, in compute_config_parquet_and_info_response
parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1099, in stream_convert_to_parquet
builder._prepare_split(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1882, in _prepare_split
for job_id, done, content in self._prepare_split_single(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2038, in _prepare_split_single
raise DatasetGenerationError("An error occurred while generating the dataset") from e
datasets.exceptions.DatasetGenerationError: An error occurred while generating the datasetNeed help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
protocolSection dict | resultsSection null | hasResults bool | documentSection null | derivedSection dict | annotationSection null |
|---|---|---|---|---|---|
{
"armsInterventionsModule": {
"armGroups": [
{
"description": "Kinesio(R)Tape for edema management applied to a randomly selected lower extremity plus standard inpatient rehabilitation after bilateral total knee arthroplasty",
"interventionNames": [
"Device: Kinesio(R)Tape for ede... | null | false | null | {
"conditionBrowseModule": {
"ancestors": null,
"browseBranches": [
{
"abbrev": "BC23",
"name": "Symptoms and General Pathology"
},
{
"abbrev": "All",
"name": "All Conditions"
}
],
"browseLeaves": [
{
"asFound": null,
"id": ... | null |
{
"armsInterventionsModule": {
"armGroups": [
{
"description": "open label single arm trial",
"interventionNames": [
"Drug: Ramipril"
],
"label": "ramipril",
"type": "ACTIVE_COMPARATOR"
}
],
"interventions": [
{
"armGroupLabels": ... | null | false | null | {
"conditionBrowseModule": {
"ancestors": [
{
"id": "D000014652",
"term": "Vascular Diseases"
},
{
"id": "D000002318",
"term": "Cardiovascular Diseases"
},
{
"id": "D000051270",
"term": "Headache Disorders, Primary"
},
{
... | null |
{
"armsInterventionsModule": {
"armGroups": [
{
"description": null,
"interventionNames": [
"Drug: Dexamethasone intravitreal implant"
],
"label": "patients with diabetic macular edema",
"type": null
},
{
"description": null,
"int... | null | false | null | {
"conditionBrowseModule": {
"ancestors": [
{
"id": "D000012164",
"term": "Retinal Diseases"
},
{
"id": "D000005128",
"term": "Eye Diseases"
},
{
"id": "D000003925",
"term": "Diabetic Angiopathies"
},
{
"id": "D00001... | null |
{
"armsInterventionsModule": {
"armGroups": [
{
"description": "One dose of nivolumab given about 4 weeks before surgical resection (removal) of a newly diagnosed SCCHN.",
"interventionNames": [
"Drug: Nivolumab 480mg and surgical resection"
],
"label": "Newly diagn... | null | false | null | {
"conditionBrowseModule": {
"ancestors": [
{
"id": "D000009375",
"term": "Neoplasms, Glandular and Epithelial"
},
{
"id": "D000009370",
"term": "Neoplasms by Histologic Type"
},
{
"id": "D000009369",
"term": "Neoplasms"
},
... | null |
{
"armsInterventionsModule": {
"armGroups": [
{
"description": "In group 40, target PaCO2 is 40 during surgery",
"interventionNames": [
"Other: group 40"
],
"label": "group 40",
"type": "EXPERIMENTAL"
},
{
"description": "In group 50, tar... | null | false | null | {
"conditionBrowseModule": {
"ancestors": [
{
"id": "D000012818",
"term": "Signs and Symptoms, Respiratory"
}
],
"browseBranches": [
{
"abbrev": "BC23",
"name": "Symptoms and General Pathology"
},
{
"abbrev": "All",
"name": "All... | null |
{
"armsInterventionsModule": {
"armGroups": [
{
"description": "For the first six 6 weeks of the trial, participants received a weekly delivery of prepared meals compliant with the SCD (breakfast, lunch, dinner, and two 2 snacks per day). Meals were prepared by Healthy Chef Creations (Orlando, FL) b... | null | true | null | {
"conditionBrowseModule": {
"ancestors": [
{
"id": "D000015212",
"term": "Inflammatory Bowel Diseases"
},
{
"id": "D000005759",
"term": "Gastroenteritis"
},
{
"id": "D000005767",
"term": "Gastrointestinal Diseases"
},
{
... | null |
{
"armsInterventionsModule": {
"armGroups": [
{
"description": null,
"interventionNames": [
"Drug: Caudal dexamedatomidine analgesia"
],
"label": "• Group A will take Caudal Levob 0. 125%+ DEXM 0.5µg/k",
"type": "ACTIVE_COMPARATOR"
},
{
"... | null | false | null | {
"conditionBrowseModule": {
"ancestors": [
{
"id": "D000014564",
"term": "Urogenital Abnormalities"
},
{
"id": "D000052776",
"term": "Female Urogenital Diseases"
},
{
"id": "D000005261",
"term": "Female Urogenital Diseases and Pregnanc... | null |
{
"armsInterventionsModule": {
"armGroups": [
{
"description": "PEG-rhG-CSF group A(q7d):6mg d1,8,subcutaneously injected,after monitoring ANC\\>0.5×109/L,the drug was stopped,and then ANC\\<0.5×109/L was temporarily supplemented with one dose of the same drug.",
"interventionNames": [
... | null | false | null | {
"conditionBrowseModule": {
"ancestors": [
{
"id": "D000006402",
"term": "Hematologic Diseases"
},
{
"id": "D000080983",
"term": "Bone Marrow Failure Disorders"
},
{
"id": "D000001855",
"term": "Bone Marrow Diseases"
}
],
... | null |
{
"armsInterventionsModule": null,
"conditionsModule": {
"conditions": [
"Osler-Rendu-Weber Disease",
"Osler-Rendu Disease",
"Telangiectasia, Hereditary Hemorrhagic"
],
"keywords": [
"Hereditary Hemorrhagic Telangiectasia",
"Health Belief Model",
"Illness Perceptions"... | null | false | null | {
"conditionBrowseModule": {
"ancestors": [
{
"id": "D000014652",
"term": "Vascular Diseases"
},
{
"id": "D000002318",
"term": "Cardiovascular Diseases"
},
{
"id": "D000020141",
"term": "Hemostatic Disorders"
},
{
"i... | null |
{"armsInterventionsModule":{"armGroups":[{"description":"Percutaneous Coronary Intervention with the(...TRUNCATED) | {"adverseEventsModule":{"description":"Adverse event reporting in the context of a post-marketing tr(...TRUNCATED) | true | {"largeDocumentModule":{"largeDocs":[{"date":"2018-03-07","filename":"Prot_SAP_000.pdf","hasIcf":fal(...TRUNCATED) | {"conditionBrowseModule":{"ancestors":[{"id":"D000003327","term":"Coronary Disease"},{"id":"D0000172(...TRUNCATED) | null |
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