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6310832
[ "Aza", "patients", ".", "Of", "the", "cyclosporine", "patients", ",", "15", "%", "had", "symptoms", "related", "to", "CMV", "infection", ".", "Serological", "evidence", "for", "Epstein", "Barr", "Virus", "infection", "was", "found", "in", "20", "%", "of", ...
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6316193
[ "Structure", "-", "activity", "and", "dose", "-", "effect", "relationships", "of", "the", "antagonism", "of", "picrotoxin", "-", "induced", "seizures", "by", "cholecystokinin", ",", "fragments", "and", "analogues", "of", "cholecystokinin", "in", "mice", ".", "In...
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6321816
[ "Vasopressin", "as", "a", "possible", "contributor", "to", "hypertension", ".", "The", "role", "of", "vasopressin", "as", "a", "pressor", "agent", "to", "the", "hypertensive", "process", "was", "examined", ".", "Vasopressin", "plays", "a", "major", "role", "in...
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6453500
[ "Toxic", "hepatitis", "induced", "by", "disulfiram", "in", "a", "non", "-", "alcoholic", ".", "A", "reversible", "toxic", "liver", "damage", "was", "observed", "in", "a", "non", "-", "alcoholic", "woman", "treated", "with", "disulfiram", ".", "The", "causati...
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6517710
[ "Atrial", "thrombosis", "involving", "the", "heart", "of", "F", "-", "344", "rats", "ingesting", "quinacrine", "hydrochloride", ".", "Quinacrine", "hydrochloride", "is", "toxic", "for", "the", "heart", "of", "F", "-", "344", "rats", ".", "Rats", "treated", "...
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6529939
[ "Alternating", "sinus", "rhythm", "and", "intermittent", "sinoatrial", "block", "induced", "by", "propranolol", ".", "Alternating", "sinus", "rhythm", "and", "intermittent", "sinoatrial", "(", "S", "-", "A", ")", "block", "was", "observed", "in", "a", "57", "-...
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6673474
[ "Hemodynamics", "and", "myocardial", "metabolism", "under", "deliberate", "hypotension", ".", "An", "experimental", "study", "in", "dogs", ".", "Coronary", "blood", "flow", ",", "cardiac", "work", "and", "metabolism", "were", "studied", "in", "dogs", "under", "s...
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6695685
[ "Accelerated", "junctional", "rhythms", "during", "oral", "verapamil", "therapy", ".", "This", "study", "examined", "the", "frequency", "of", "atrioventricular", "(", "AV", ")", "dissociation", "and", "accelerated", "junctional", "rhythms", "in", "59", "patients", ...
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6728873
[ "Interstrain", "variation", "in", "acute", "toxic", "response", "to", "caffeine", "among", "inbred", "mice", ".", "Acute", "toxic", "dosage", "-", "dependent", "behavioral", "effects", "of", "caffeine", "were", "compared", "in", "adult", "males", "from", "seven"...
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6806735
[ "Treatment", "of", "ovarian", "cancer", "with", "a", "combination", "of", "cis", "-", "platinum", ",", "adriamycin", ",", "cyclophosphamide", "and", "hexamethylmelamine", ".", "During", "the", "last", "2", "1", "/", "2", "years", ",", "38", "patients", "with...
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6884395
[ "Nontraumatic", "dissecting", "aneurysm", "of", "the", "basilar", "artery", ".", "A", "case", "of", "nontraumatic", "dissecting", "aneurysm", "of", "the", "basilar", "artery", "in", "association", "with", "hypertension", ",", "smoke", ",", "and", "oral", "contra...
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689020
[ "A", "method", "for", "the", "measurement", "of", "tremor", ",", "and", "a", "comparison", "of", "the", "effects", "of", "tocolytic", "beta", "-", "mimetics", ".", "A", "method", "permitting", "measurement", "of", "finger", "tremor", "as", "a", "displacement...
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6893265
[ "Propylthiouracil", "-", "induced", "hepatic", "damage", ".", "Two", "cases", "of", "propylthiouracil", "-", "induced", "liver", "damage", "have", "been", "observed", ".", "The", "first", "case", "is", "of", "an", "acute", "type", "of", "damage", ",", "prove...
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6985297
[ "Studies", "on", "the", "bradycardia", "induced", "by", "bepridil", ".", "Bepridil", ",", "a", "novel", "active", "compound", "for", "prophylactic", "treatment", "of", "anginal", "attacks", ",", "induced", "persistent", "bradycardia", "and", "a", "non", "-", "...
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6985498
[ "Hepatitis", "and", "renal", "tubular", "acidosis", "after", "anesthesia", "with", "methoxyflurane", ".", "A", "69", "-", "year", "-", "old", "man", "operated", "for", "acute", "cholecystitis", "under", "methoxyflurane", "anesthesia", "developed", "postoperatively",...
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7018927
[ "Pituitary", "response", "to", "luteinizing", "hormone", "-", "releasing", "hormone", "during", "haloperidol", "-", "induced", "hyperprolactinemia", ".", "The", "effects", "of", "a", "6", "-", "hour", "infusion", "with", "haloperidol", "on", "serum", "prolactin", ...
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7121659
[ "Antirifampicin", "antibodies", "in", "acute", "rifampicin", "-", "associated", "renal", "failure", ".", "5", "patients", "with", "acute", "renal", "failure", "(", "3", "with", "thrombopenia", "and", "hemolysis", ")", "induced", "by", "the", "reintroduction", "o...
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7176945
[ "Post", "-", "suxamethonium", "pains", "in", "Nigerian", "surgical", "patients", ".", "Contrary", "to", "an", "earlier", "report", "by", "Coxon", ",", "scoline", "pain", "occurs", "in", "African", "negroes", ".", "Its", "incidence", "was", "determined", "in", ...
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7248895
[ "Invasive", "carcinoma", "of", "the", "renal", "pelvis", "following", "cyclophosphamide", "therapy", "for", "nonmalignant", "disease", ".", "A", "47", "-", "year", "-", "old", "woman", "with", "right", "hydroureteronephrosis", "due", "to", "ureterovesical", "junct...
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7315949
[ "Medial", "changes", "in", "arterial", "spasm", "induced", "by", "L", "-", "norepinephrine", ".", "In", "normal", "rats", ",", "the", "media", "of", "small", "arteries", "(", "0", ".", "4", "-", "-", "0", ".", "2", "mm", "in", "diameter", ")", "previ...
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733189
[ "Bilateral", "retinal", "artery", "and", "choriocapillaris", "occlusion", "following", "the", "injection", "of", "long", "-", "acting", "corticosteroid", "suspensions", "in", "combination", "with", "other", "drugs", ":", "I", ".", "Clinical", "studies", ".", "Two"...
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7369302
[ "Abnormalities", "of", "the", "pupil", "and", "visual", "-", "evoked", "potential", "in", "quinine", "amblyopia", ".", "Total", "blindness", "with", "a", "transient", "tonic", "pupillary", "response", ",", "denervation", "supersensitivity", ",", "and", "abnormal",...
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7411769
[ "Indomethacin", "-", "induced", "hyperkalemia", "in", "three", "patients", "with", "gouty", "arthritis", ".", "We", "describe", "three", "patients", "in", "whom", "severe", ",", "life", "-", "threatening", "hyperkalemia", "and", "renal", "insufficiency", "develope...
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7457821
[ "Etomidate", ":", "a", "foreshortened", "clinical", "trial", ".", "A", "clinical", "evaluation", "of", "etomidate", "for", "outpatient", "cystoscopy", "was", "embarked", "upon", ".", "Unpremedicated", "patients", "were", "given", "fentanyl", "1", "microgram", "/",...
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7477981
[ "Levodopa", "-", "induced", "dyskinesias", "are", "improved", "by", "fluoxetine", ".", "We", "evaluated", "the", "severity", "of", "motor", "disability", "and", "dyskinesias", "in", "seven", "levodopa", "-", "responsive", "patients", "with", "Parkinson", "'", "s...
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7479194
[ "A", "large", "population", "-", "based", "follow", "-", "up", "study", "of", "trimethoprim", "-", "sulfamethoxazole", ",", "trimethoprim", ",", "and", "cephalexin", "for", "uncommon", "serious", "drug", "toxicity", ".", "We", "conducted", "a", "population", "...
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7492040
[ "Clinical", "safety", "of", "lidocaine", "in", "patients", "with", "cocaine", "-", "associated", "myocardial", "infarction", ".", "STUDY", "OBJECTIVE", ":", "To", "evaluate", "the", "safety", "of", "lidocaine", "in", "the", "setting", "of", "cocaine", "-", "in...
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753803
[ "Experimental", "progressive", "muscular", "dystrophy", "and", "its", "treatment", "with", "high", "doses", "anabolizing", "agents", ".", "We", "are", "still", "a", "long", "way", "from", "discovering", "an", "unequivocal", "pathogenetic", "interpretation", "of", ...
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7644931
[ "Paclitaxel", "3", "-", "hour", "infusion", "given", "alone", "and", "combined", "with", "carboplatin", ":", "preliminary", "results", "of", "dose", "-", "escalation", "trials", ".", "Paclitaxel", "(", "Taxol", ";", "Bristol", "-", "Myers", "Squibb", "Company"...
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7661171
[ "The", "dose", "-", "dependent", "effect", "of", "misoprostol", "on", "indomethacin", "-", "induced", "renal", "dysfunction", "in", "well", "compensated", "cirrhosis", ".", "Misoprostol", "(", "200", "micrograms", ")", "has", "been", "shown", "to", "acutely", ...
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7671401
[ "Increased", "frequency", "and", "severity", "of", "angio", "-", "oedema", "related", "to", "long", "-", "term", "therapy", "with", "angiotensin", "-", "converting", "enzyme", "inhibitor", "in", "two", "patients", ".", "Adverse", "reactions", "to", "drugs", "a...
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7727612
[ "Myoclonus", "associated", "with", "lorazepam", "therapy", "in", "very", "-", "low", "-", "birth", "-", "weight", "infants", ".", "Lorazepam", "is", "being", "used", "with", "increasing", "frequency", "as", "a", "sedative", "in", "the", "newborn", "and", "th...
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7739955
[ "Transvenous", "right", "ventricular", "pacing", "during", "cardiopulmonary", "resuscitation", "of", "pediatric", "patients", "with", "acute", "cardiomyopathy", ".", "We", "describe", "the", "cardiopulmonary", "resuscitation", "efforts", "on", "five", "patients", "who",...
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7931490
[ "Efficacy", "and", "safety", "of", "granisetron", ",", "a", "selective", "5", "-", "hydroxytryptamine", "-", "3", "receptor", "antagonist", ",", "in", "the", "prevention", "of", "nausea", "and", "vomiting", "induced", "by", "high", "-", "dose", "cisplatin", ...
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7967231
[ "Pharmacological", "studies", "on", "a", "new", "dihydrothienopyridine", "calcium", "antagonist", ",", "S", "-", "312", "-", "d", ".", "5th", "communication", ":", "anticonvulsant", "effects", "in", "mice", ".", "S", "-", "312", ",", "S", "-", "312", "-", ...
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8096565
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9360520
[ "Autosomal", "dominant", "neurohypophyseal", "diabetes", "insipidus", "associated", "with", "a", "missense", "mutation", "encoding", "Gly23", "-", "-", ">", "Val", "in", "neurophysin", "II", ".", "Autosomal", "dominant", "neurohypophyseal", "diabetes", "insipidus", ...
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9382023
[ "Hypertensive", "response", "during", "dobutamine", "stress", "echocardiography", ".", "Among", "3", ",", "129", "dobutamine", "stress", "echocardiographic", "studies", ",", "a", "hypertensive", "response", ",", "defined", "as", "systolic", "blood", "pressure", "(",...
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9382108
[ "Risk", "reversals", "in", "predictive", "testing", "for", "Huntington", "disease", ".", "The", "first", "predictive", "testing", "for", "Huntington", "disease", "(", "HD", ")", "was", "based", "on", "analysis", "of", "linked", "polymorphic", "DNA", "markers", ...
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9385378
[ "A", "novel", "common", "missense", "mutation", "G301C", "in", "the", "N", "-", "acetylgalactosamine", "-", "6", "-", "sulfate", "sulfatase", "gene", "in", "mucopolysaccharidosis", "IVA", ".", "Mucopolysaccharidosis", "IVA", "(", "MPS", "IVA", ")", "is", "an",...
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9391889
[ "Paternal", "transmission", "of", "congenital", "myotonic", "dystrophy", ".", "We", "report", "a", "rare", "case", "of", "paternally", "transmitted", "congenital", "myotonic", "dystrophy", "(", "DM", ")", ".", "The", "proband", "is", "a", "23", "year", "old", ...
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941901
[ "Low", "levels", "of", "beta", "hexosaminidase", "A", "in", "healthy", "individuals", "with", "apparent", "deficiency", "of", "this", "enzyme", ".", "Appreciable", "beta", "hexosaminidase", "A", "(", "hex", "A", ")", "activity", "has", "been", "detected", "in"...
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9420335
[ "The", "tumor", "suppressor", "gene", "Smad4", "/", "Dpc4", "is", "required", "for", "gastrulation", "and", "later", "for", "anterior", "development", "of", "the", "mouse", "embryo", ".", "Mutations", "in", "the", "SMAD4", "/", "DPC4", "tumor", "suppressor", ...
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9425228
[ "Prevalence", "of", "p16", "and", "CDK4", "germline", "mutations", "in", "48", "melanoma", "-", "prone", "families", "in", "France", ".", "The", "French", "Familial", "Melanoma", "Study", "Group", ".", "Germline", "mutations", "in", "the", "p16", "and", "CDK...
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9425239
[ "Progression", "of", "somatic", "CTG", "repeat", "length", "heterogeneity", "in", "the", "blood", "cells", "of", "myotonic", "dystrophy", "patients", ".", "The", "genetic", "basis", "of", "myotonic", "dystrophy", "(", "DM", ")", "is", "the", "expansion", "of",...
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 79, 80, 0, 0, 0, 0, 0, 0, 1, 2, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 79, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 79, 0, 0, 0, 0, 0, 0, 0, 0,...
9427148
[ "Aspartylglucosaminuria", "among", "Palestinian", "Arabs", ".", "Aspartylglucosaminuria", "(", "AGU", ")", "is", "a", "rare", "disorder", "of", "glycoprotein", "metabolism", "caused", "by", "the", "deficiency", "of", "the", "lysosomal", "enzyme", "aspartylglucosaminid...
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9428298
[ "Continuously", "nebulized", "albuterol", "in", "severe", "exacerbations", "of", "asthma", "in", "adults", ":", "a", "case", "-", "controlled", "study", ".", "A", "retrospective", ",", "case", "-", "controlled", "analysis", "comparing", "patients", "admitted", "...
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9443866
[ "Ataxia", "-", "telangiectasia", ":", "identification", "and", "detection", "of", "founder", "-", "effect", "mutations", "in", "the", "ATM", "gene", "in", "ethnic", "populations", ".", "To", "facilitate", "the", "evaluation", "of", "ATM", "heterozygotes", "for",...
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9450866
[ "Piebaldism", "with", "deafness", ":", "molecular", "evidence", "for", "an", "expanded", "syndrome", ".", "In", "a", "South", "African", "girl", "of", "Xhosa", "stock", "with", "severe", "piebaldism", "and", "profound", "congenital", "sensorineural", "deafness", ...
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9457913
[ "Cycloheximide", "facilitates", "the", "identification", "of", "aberrant", "transcripts", "resulting", "from", "a", "novel", "splice", "-", "site", "mutation", "in", "COL17A1", "in", "a", "patient", "with", "generalized", "atrophic", "benign", "epidermolysis", "bull...
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9457914
[ "A", "deletion", "mutation", "in", "COL17A1", "in", "five", "Austrian", "families", "with", "generalized", "atrophic", "benign", "epidermolysis", "bullosa", "represents", "propagation", "of", "an", "ancestral", "allele", ".", "Patients", "with", "generalized", "atro...
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9463309
[ "The", "haptoglobin", "-", "gene", "deletion", "responsible", "for", "anhaptoglobinemia", ".", "We", "have", "found", "an", "allelic", "deletion", "of", "the", "haptoglobin", "(", "Hp", ")", "gene", "from", "an", "individual", "with", "anhaptoglobinemia", ".", ...
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9463314
[ "ATM", "mutations", "and", "phenotypes", "in", "ataxia", "-", "telangiectasia", "families", "in", "the", "British", "Isles", ":", "expression", "of", "mutant", "ATM", "and", "the", "risk", "of", "leukemia", ",", "lymphoma", ",", "and", "breast", "cancer", "....
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9463318
[ "The", "DMPK", "gene", "of", "severely", "affected", "myotonic", "dystrophy", "patients", "is", "hypermethylated", "proximal", "to", "the", "largely", "expanded", "CTG", "repeat", ".", "Using", "methylation", "-", "sensitive", "restriction", "enzymes", ",", "we", ...
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9465301
[ "Genomic", "organization", "of", "the", "UBE3A", "/", "E6", "-", "AP", "gene", "and", "related", "pseudogenes", ".", "The", "UBE3A", "gene", "encodes", "the", "E6", "-", "AP", "ubiquitin", "-", "protein", "ligase", "and", "has", "recently", "been", "shown"...
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946593
[ "Paraplegia", "following", "intrathecal", "methotrexate", ":", "report", "of", "a", "case", "and", "review", "of", "the", "literature", ".", "A", "patient", "who", "developed", "paraplegia", "following", "the", "intrathecal", "instillation", "of", "methotrexate", ...
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Benchmark Merged dataset - Test

This dataset was generated by the Data preprocessing step of the NERFAIR workflow (More information: https://github.com/YasCoMa/ner-fair-workflow )

It contains the test data of the following datasets:

  • ncbi: Doğan, Rezarta Islamaj, Robert Leaman, and Zhiyong Lu. 2014. “NCBI Disease Corpus: A Resource for Disease Name Recognition and Concept Normalization.” Journal of Biomedical Informatics 47 (February): 1–10.

  • bc5cdr: Li, Jiao, Yueping Sun, Robin J. Johnson, Daniela Sciaky, Chih-Hsuan Wei, Robert Leaman, Allan Peter Davis, Carolyn J. Mattingly, Thomas C. Wiegers, and Zhiyong Lu. 2016. “BioCreative V CDR Task Corpus: A Resource for Chemical Disease Relation Extraction.” Database: The Journal of Biological Databases and Curation 2016 (May): baw068.

  • biored: Luo, Ling, Po-Ting Lai, Chih-Hsuan Wei, Cecilia N. Arighi, and Zhiyong Lu. 2022. “BioRED: A Rich Biomedical Relation Extraction Dataset.” Briefings in Bioinformatics 23 (5): bbac282.

  • chia: Kury, Fabrício, Alex Butler, Chi Yuan, Li-Heng Fu, Yingcheng Sun, Hao Liu, Ida Sim, Simona Carini, and Chunhua Weng. 2020. “Chia, a Large Annotated Corpus of Clinical Trial Eligibility Criteria.” Scientific Data 7 (1): 281.

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