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# set random seed to promote repeatability in CI unit tests using Random Random.seed!(101) for filename in ( "jop_convolve.jl", "jop_envelope.jl", "jop_filter.jl") include(filename) end
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module DEACpopulation using Random; const functionNames = ["randPop", "flatPop", "gaussPop", "gaussPop2", "gaussOne", "gaussTwo", "gaussThree"] #Generate population functions functio...
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<reponame>HoBeZwe/BEAST.jl<filename>src/utils/polyeig.jl export companion function companion(Z) T = eltype(Z) K = size(Z,3) @assert K > 1 M, N = size(Z)[1:2] C = similar(Z, M*(K-1), N*(K-1)) fill!(C,0) @assert M == N Id = Matrix{T}(I, M, N) for m in 2:K-1 n = m-1 ...
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<gh_stars>10-100 @testset "CrossValidation" begin ω = [0.1, 0.1] A = [0.5 0; 0 0.5] B = [0.5 0; 0 0.5] simulation = simulate_GAS_1_1(Normal, 0.0, ω, A, B, 1) gas = ScoreDrivenModels.Model(1, 1, Normal, 0.0) bac = cross_validation(gas, simulation, 10, 4985) end
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## Various methods for filtering and sorting Metadata const CATEGORY_ORDER = [:module, :function, :method, :type, :typealias, :macro, :global] """ Filter Metadata based on categories or file source. **Arguments** * `docs` : main input **Optional keyword arguments** * `categories` : categories to include in the re...
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<reponame>corail-research/SeaPearlZoo<gh_stars>1-10 using SeaPearl using SeaPearlExtras using ReinforcementLearning const RL = ReinforcementLearning using Flux using GeometricFlux using JSON using BSON: @load, @save using Random using Dates # ------------------- # Generator # ------------------- n_city = 21 grid_size ...
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<gh_stars>0 #! /usr/bin/julia using TimeSeries using HTTP root="/home/jls/data/2020-Corona/raw/RKI/" function download_rki(source) r = HTTP.request("GET", source) String(r.body) end function parse_rki(pattern,file) m=match(pattern,file).match all=collect(eachmatch(r">([\d\.]+)<",m)) confirmed=pars...
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export AR_model """ AR_model(df, y, grouping, d, link; penalized = penalized) Form the autoregressive (AR(1)) model for intercept only regression with the specified base distribution (d) and link function (link). # Arguments - `df`: A named `DataFrame` - `y`: Ouctcome variable name of interest, specified as a `Sy...
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module BigCombinatorics using Combinatorics export Fibonacci export Factorial, DoubleFactorial, FallingFactorial, RisingFactorial export Binomial, Catalan export Derangements, MultiChoose, Multinomial export Bell, Stirling1, Stirling2 export IntPartitions, IntPartitionsDistinct export Euler, PowerSum _master_table =...
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<filename>src/utils.jl """ use_style(style::String) use_style(style::Vector{String}) Use matplotlib style settings from a style specification `style`. The style name of "default" is reserved for reverting back to the default style settings. ArviZ-specific styles are `["arviz-whitegrid", "arviz-darkgrid", "ar...
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using Pkg # change pwd cd(joinpath(dirname(@__FILE__),"..")) # activate environment Pkg.activate(pwd()) @info pwd() using Pluto Pluto.run()
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<filename>examples/subplots.jl include("line_scatter.jl") function subplots1() p1 = linescatter1() p2 = linescatter2() p = [p1 p2] p end function subplots2() p1 = linescatter1() p2 = linescatter2() p = [p1, p2] p end function subplots3() p1 = linescatter6() p2 = linescatter2(...
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<reponame>Maelstrom6/CryptoTools.jl using CryptoTools using Test using SafeTestsets @testset "CryptoTools.jl" begin @time @safetestset "Block Cipher" begin include("BlockCipher.jl") end @time @safetestset "Stream Cipher" begin include("StreamCipher.jl") end @time @safetestset "Secret Sharing" begin include...
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# * STO-NG @doc raw""" STO_NG(n, ℓ, α, c, R) Slater-type orbital constructed from `N` primitive Gaussian-type orbitals with principal quantum numbers `n`, angular momenta `ℓ`, exponents `α`, and contraction coefficients `c`, all of which are centred at `R` (which may be a scalar for linear molecules or an `Abstra...
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module ArrayInterface using Requires using LinearAlgebra using SparseArrays function ismutable end """ ismutable(x::DataType) Query whether a type is mutable or not, see https://github.com/JuliaDiffEq/RecursiveArrayTools.jl/issues/19. """ Base.@pure ismutable(x::DataType) = x.mutable ismutable(x) = ismutable(ty...
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<filename>stdlib/LazyArtifacts/src/LazyArtifacts.jl<gh_stars>1000+ # This file is a part of Julia. License is MIT: https://julialang.org/license module LazyArtifacts # reexport the Artifacts API using Artifacts: Artifacts, artifact_exists, artifact_path, artifact_meta, artifact_hash, select_downloadable...
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<reponame>qhho/Rcl.jl module Rcl include(joinpath(@__DIR__, "..", "gen", "LibRcl.jl")) # module internal # include("internal.jl") # end # using .LibRcl: RclError export RclError # # module rcl # include("base.jl") # include("node_base.jl") # end # # export rcl # using .rcl: name, namespace # export name, namespace #...
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<reponame>mcabbott/Avalon.jl using Yota using Base.Iterators using Statistics using MLDataUtils using Distributions using CUDA import NNlib import NNlibCUDA import ChainRulesCore: rrule, rrule_via_ad, NoTangent, ZeroTangent, @thunk, unthunk using Tullio, KernelAbstractions, LoopVectorization, CUDAKernels include("yot...
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<reponame>JuliaBinaryWrappers/LERC_jll.jl # Use baremodule to shave off a few KB from the serialized `.ji` file baremodule LERC_jll using Base using Base: UUID import JLLWrappers JLLWrappers.@generate_main_file_header("LERC") JLLWrappers.@generate_main_file("LERC", UUID("88015f11-f218-50d7-93a8-a6af411a945d")) end # ...
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<reponame>joshbode/MbedTLS.jl immutable mbedtls_mpi s::Cint n::Csize_t p::Ptr{Cuint} end immutable mbedtls_rsa_context ver::Cint len::Csize_t N::mbedtls_mpi E::mbedtls_mpi D::mbedtls_mpi P::mbedtls_mpi Q::mbedtls_mpi # More fields follow, but omitted here, since they # a...
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@unroll function max_step(cones::Tuple{Vararg{Cone}}, x) maxim = typemin(Float64) @unroll for cone in cones val = max_step(cone, x) if val > maxim maxim = val end end return maxim end function max_step(cone::POC{dim}, x) where dim minim = typemax(Float64) for i=cti(cone, 1):cti(cone,dim) if x[i] < m...
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## Packages using ForwardDiff, LinearAlgebra, Plots ## Parameters β = 0.99; σ = 2; γ = 1; ## Utility functions u(x) = x^(1 - σ) / (1 - σ); v(x) = x^(1 + 1/γ) / (1 + 1/γ); U(c, n) = u(c) - v(n); ## Differentials Uc(c) = ForwardDiff.derivative(u, c); Ucc(c) = ForwardDiff.derivative(Uc, c); Un(n) = -ForwardDiff.deriva...
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<reponame>giadasp/ATA.jl<filename>src/build/add_constraints.jl<gh_stars>1-10 """ add_constraints!(ata_model::AbstractModel; constraints_file = "constraints.csv", constraints_delim = ";") # Description Add categorical and sum constraints to the `ATA.AbstractModel` as specified in the `constraints_file`. Alternat...
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# module Variant export Variant, getChrom, getPos, getId, getRef, getAlt, getQual, getFilter, getInfo, getFormat #Stores data for each variant #type Variant mutable struct Variant CHROM::AbstractString POS::Int64 ID::Array{AbstractString,1} REF::AbstractString ALT::Array{AbstractString,1} #QU...
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<gh_stars>1-10 @inline UnsafeAtomics.load(x) = UnsafeAtomics.load(x, seq_cst) @inline UnsafeAtomics.store!(x, v) = UnsafeAtomics.store!(x, v, seq_cst) @inline UnsafeAtomics.cas!(x, cmp, new) = UnsafeAtomics.cas!(x, cmp, new, seq_cst, seq_cst) @inline UnsafeAtomics.modify!(ptr, op, x) = UnsafeAtomics.modify!(ptr, op, x,...
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<gh_stars>10-100 using Dolo dolo_dir = Dolo.pkg_path model = Dolo.yaml_import("examples/models/rbc_iid.yaml") process = Dolo.MvNormal(0.001) dp = Dolo.discretize(process) @time sol = time_iteration(model, dp; verbose=true, maxit=5) @time dd = Dolo.improved_time_iteration(model, dp, sol.dr; verbose=true) iv...
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<filename>test/performance/runtests_benchmark.jl<gh_stars>10-100 using Jute runtests_dir = Jute.get_runtests_dir() test_files = [joinpath(runtests_dir, "runtests_benchmark_testcases.jl")] test_include_only = (ARGS[1] == "test_include_only") run_options = Jute.build_run_options(options=Dict(:verbosity => 0)) t = tim...
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## writer type Writer _cache::Dict _partialCache::Dict _loadPartial ## Function or nothing end Writer() = Writer(Dict(), Dict(), nothing) function clearCache(w::Writer) w._cache=Dict() w._partialCache=Dict() end function compile(io::IO, w::Writer, template, tags) # if haskey(w._cache, templat...
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using DataFrames using Glob using BeNGS function read_files(fasta_file, copynumber_file="") templates = BeNGS.read_fasta_records(fasta_file) template_df = DataFrame() template_df[:timepoint] = [Symbol(split(s.name, "_")[1]) for s in templates] template_df[:name] = [s.name for s in templates] temp...
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ENV["OMP_NUM_THREADS"] = 4 export PardisoShift struct PardisoShift point::Float64 verbose::Bool end """ PardisoShift(p::Number; verbose = false) When used as the `point = PardisoShift(p)` keyword argument in `diagonalize`, it forces use of the MKL Pardiso library for the shift-and-invert Lanczos method...
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<filename>src/LShapedSolvers.jl __precompile__() module LShapedSolvers # Standard library using LinearAlgebra using SparseArrays using Distributed using Printf # External libraries using TraitDispatch using Parameters using JuMP using StochasticPrograms using MathProgBase using RecipesBase using ProgressMeter using G...
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using RNLA, Test, LinearAlgebra, SparseArrays @testset "rrpca_test1" begin m = 100 k = 10 n = 100 p = 0.1 L1 = rand(m, k) * rand(k, n) S1 = sprandn(m, n, p) A = L1 + S1 + rand(m, n) L2, S2, E2 = rrpca(A) @test norm(abs.(L1) - abs.(L2)) < sqrt(eps()) @test norm(abs.(S1) - abs....
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# # This file is a part of MolecularGraph.jl # Licensed under the MIT License http://opensource.org/licenses/MIT # module MolecularGraph export MolecularGraphUtil, MolecularGraphGeometry, MolecularGraphModel module MolecularGraphUtil include("./util/meta.jl") include("...
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" MutationOperator represents the method that mutates the individuals selected to create a new generation of individuals. # Fields - `_method::Function`: method used for mutation. - `_probability::Float32`: probability of mutation. - `_varArgs::Array{Any}`: arguments necessary for the mutation method. " struct Mutatio...
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using Downloads bathymetry_path = joinpath(@__DIR__, "bathymetry-360x150-latitude-75.0.jld2") boundary_conditions_path = joinpath(@__DIR__, "boundary_conditions-1degree.jld2") initial_condition_path = joinpath(@__DIR__, "initial_conditions-1degree.jld2") # TODO: convert to DataDeps download_bathymetry(path=bathymetr...
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<reponame>Kiruse/Pia.jl ###################################################################### # Signals UTs # ----- # Licensed under Apache License 2.0 module TestSignals using Test using Pia.Signals @testset "Signals" begin @testset "basic" begin let signal = Signal() @test !isset(signal) ...
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<filename>src/base_cached_networks.jl # This file contains methods that are dispatched to when using neural networks # with a preallocated cache (called CachedNetworks). Those are used to greatly # improve performance, especially in export cached, vectorize_gradient, weights, grad_cache """ NNCache{N} The base a...
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<filename>src/structure.jl import YAML import LinearAlgebra import Base.length import IterTools: groupby using Printf using Formatting struct Structure lattice::Array{Float64,2} species::Array{String} fcoords::Array{Float64,2} replicate::Array{Int16} composition::Dict function Structure(lattic...
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using Gen import Random @gen function model() if ({:z} ~ bernoulli(0.5)) m1 = ({:m1} ~ gamma(1, 1)) m2 = ({:m2} ~ gamma(1, 1)) else m = ({:m} ~ gamma(1, 1)) (m1, m2) = (m, m) end {:y1} ~ normal(m1, 0.1) {:y2} ~ normal(m2, 0.1) end @gen function mean_random_walk_prop...
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module psmp export weibel_streaming using Sobol function uniform_6d(Np::Int, nskip=0,T=Float64) x1n=Array{T}(Np) x2n=Array{T}(Np) x3n=Array{T}(Np) v1n=Array{T}(Np) v2n=Array{T}(Np) v3n=Array{T}(Np) sob = Sobol.SobolSeq(6) Sobol.skip(sob, 4+nskip) # Skip some entries for i=1:Np x1n[i],x2n[i],x3...
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""" Render an inline R script, substituting invalid "\$" signs for Julia symbols """ function render(script::String) symdict = OrderedDict{String,Any}() local k = 0 local lastex = RParseError() local line local col local c if !isascii(script) if !rcopy(reval("isTRUE(l10n_info()\$`UT...
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<filename>src/ClipData.jl module ClipData using CSV, Tables using InteractiveUtils: clipboard export cliptable, cliparray, mwetable, mwearray, @mwetable, @mwearray """ cliptable(; kwargs...) Make a table from the clipboard. Returns a `CSV.File`, which can then be transformed into a `DataFrame` or other Tables....
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<gh_stars>0 read_csv(path; kws...) = read_csv(path, DataFrame; kws...) # function read_csv(path, sink::Type{<:AbstractMatrix{T}}; delim=nothing, kws...) where T # x = delim === nothing ? readdlm(path, T; kws...) : readdlm(path, delim, T; kws...) # return x # end function read_csv(path, sink::Type{A}; kws...) ...
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module TestDoctest using StaticStorages using Documenter: doctest using Test test_doctest() = doctest(StaticStorages, manual = false) end # module
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<filename>src/TermInterface.jl module TermInterface """ istree(x) Returns `true` if `x` is a term. If true, `operation`, `arguments` must also be defined for `x` appropriately. """ istree(x) = istree(typeof(x)) istree(x::Type{T}) where {T} = false export istree """ symtype(x) Returns the symbolic type of `x...
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# create a dictionary with all the possible models function get_car_models(env::UrbanEnv, get_model::Function) d = Dict{SVector{2, LaneTag}, DriverModel}() # r1 = SVector(LaneTag(1,1), LaneTag(2,1)) d[r1] = get_model(env, r1) r2 = SVector(LaneTag(1,1), LaneTag(5,1)) d[r2] = get_model...
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<reponame>soumitradev/TicTacToe #= TicTacToe implementation in Julia @author : soumitradev (<NAME>) =# # Create 3x3 board for TicTacToe board = [[" ", " ", " "], [" ", " ", " "], [" ", " ", " "]]; # Define Player Characters for singleplayer # Spelled wrong for (bad) comedic purposes (I know, very fu...
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<reponame>modirshanechi/pub-xumodirshanechi2021-PlosCB<gh_stars>1-10 # The code to generate Fig 5 # The relevant statistics reported in the paper are calculated at the end of the # file using PyPlot using SurNoR_2020 using Statistics using MAT using HypothesisTests PyPlot.svg(true) rcParams = PyPlot.PyDict(PyPlot.matp...
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<filename>test/test_macros.jl @testset "OpenCL.Macros" begin @testset "OpenCL.Macros version platform" begin for platform in cl.platforms() version = cl.opencl_version(platform) v11 = cl.@min_v11? platform true : false v12 = cl.@min_v12? platform true : false ...
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rgpcentury = "([1-9][0-9]?)\\. (Jahrh|Jh)" rgx1qcentury = Regex("(1\\.|erstes) Viertel (des )?" * rgpcentury, "i") rgx2qcentury = Regex("(2\\.|zweites) Viertel (des )?" * rgpcentury, "i") rgx3qcentury = Regex("(3\\.|drittes) Viertel (des )?" * rgpcentury, "i") rgx4qcentury = Regex("(4\\.|viertes) Viertel (des )?" * rg...
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# ***************************************************************************** # Written by <NAME>, <EMAIL> # ***************************************************************************** # Copyright ã ``2015, United States Government, as represented by the # Administrator of the National Aeronautics and Space Adminis...
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<reponame>mleprovost/QROMP.jl<filename>src/wrapper.jl export greedysolver function greedysolver(algo::String, ψ::AbstractMatrix{T}, u::AbstractVector{T}; invert::Bool=true, verbose::Bool = true, ϵrel::Float64 = 1e-1, maxterms::Int64=typemax(Int64)) where {T} if algo ∈ ["pivotedqr", "pivot"] return pivote...
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<gh_stars>0 # Literals treated as constants function Base.convert(::Type{Expression}, n::Number) if !(typeof(n) <: Expression) return Constant(n) else return n end end # Register functions and handle literals macro register(sig) splitsig = splitdef(:($sig = nothing)) name = splitsig...
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module SummitCheckpoint using ..Ahorn, Maple const placements = Ahorn.PlacementDict( "Summit Checkpoint" => Ahorn.EntityPlacement( Maple.Checkpoint ) ) baseSprite = "scenery/summitcheckpoints/base02.png" function Ahorn.selection(entity::Maple.Checkpoint) x, y = Ahorn.position(entity) return...
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<filename>test/runtests.jl using Test, DispatchedTuples struct Foo end struct Bar end struct FooBar end ##### ##### DispatchedTuple's ##### @testset "DispatchedTuples - base behavior" begin dt = DispatchedTuple(((Foo(), 1), (Bar(), 2))) @test dispatch(dt, Foo()) == (1,) @test dispatch(dt, Bar()) == (2,) ...
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<filename>benchmark/bench_equilibria.jl module BenchEquilibria using BenchmarkTools using LatticeBoltzmann import LatticeBoltzmann: equilibrium, equilibrium! suite = BenchmarkGroup() function initialize_benchmark(q = D2Q9(), τ = 1.0, scale = 2) benchmark_problem = LatticeBoltzmann.TGV(q, τ, scale) LatticeB...
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# Use baremodule to shave off a few KB from the serialized `.ji` file baremodule snappy_jll using Base using Base: UUID import JLLWrappers JLLWrappers.@generate_main_file_header("snappy") JLLWrappers.@generate_main_file("snappy", UUID("fe1e1685-f7be-5f59-ac9f-4ca204017dfd")) end # module snappy_jll
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<filename>src/graphOps.jl<gh_stars>0 "Convert the indices in a graph to 32-bit ints. This takes less storage, but does not speed up much" shortIntGraph(a::SparseMatrixCSC) = SparseMatrixCSC{Float64,Int32}(convert(Int32,a.m), convert(Int32,a.n), convert(Array{Int32,1},a.colptr), convert(Array{Int32,1},a.rowval), a.nzv...
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# MIT License # # Copyright (c) 2018 <NAME> # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the Software without restriction, including without limitation the rights # to use, copy, modify, merge, publi...
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<gh_stars>100-1000 """ rand(::Type{DQMC}, m::Model, nslices::Int) Draw random configuration. """ Base.rand(::Type{DQMC}, m::Model, nslices) = throw(MethodError(rand, (DQMC, m, nslices))) """ nflavors(model) Returns the number of activer fermion flavors of a given Quantum Monte Carlo model. The size of the ...
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<gh_stars>0 using ReproducePlotUtils using Test @testset "ReproducePlotUtils.jl" begin # Write your tests here. end
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@testset "26.remove-duplicates-from-sorted-array.jl" begin nums1 = [1, 1, 2] @test remove_duplicates1!(nums1) == 2 && nums1[1: 2] == [1, 2] nums2 = [0, 0, 1, 1, 1, 2, 2, 3, 3, 4] @test remove_duplicates1!(nums2) == 5 && nums2[1: 5] == [0, 1, 2, 3, 4] end
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""" ap_test_fm(re, factors) CROSS-SECTIONAL TESTS USING THE FAMA-MACBETH REGRESSION Fama-MacBeth standard errors do not include corrections for the fact that the betas are also estimated. INPUTS `re': T x N matrix of excess returns, where T is the number of periods for each test assets and N is the number of test as...
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include("required.jl") ## Conditional arguments # outcome = "rf" # outcome = "bart" # save_figures = true # Make sure "outcome" is defined if !(@isdefined outcome) @warn "'outcome' not defined, must be either 'raw', 'bio', 'rf', or 'bart'" elseif !(outcome in ["raw", "bio", "rf", "bart"]) @warn "'outcome' inv...
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{"score": 8.08, "score_count": 228189, "timestamp": 1582496547.0} {"score": 8.08, "score_count": 228189, "timestamp": 1582165177.0} {"score": 8.1, "score_count": 215647, "timestamp": 1575927522.0} {"score": 8.12, "score_count": 201871, "timestamp": 1569423395.0} {"score": 8.12, "score_count": 200980, "timestamp": 15689...
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<reponame>dhonza/Loudspeakers.jl<gh_stars>0 export record_response_ecasound, measure_response, measurement_info, calibrate_response, compute_ir export table_measurement export postprocess_response, postprocess_dir function record_response_ecasound(fstimulus, fresponse; duration=2s) durationsec = ustrip(Float32, u"...
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function nlp_cvx_105_013( optimizer, objective_tol, primal_tol, dual_tol, termination_target = TERMINATION_TARGET_LOCAL, primal_target = PRIMAL_TARGET_LOCAL, ) model = Model(optimizer) @variable(model, x, start = 0.1) @variable(model, y) @objective(model, Min, -x + y) @NLco...
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ENV["GKSwstype"]="100" #src #md # # Who am I ? #md # #md # - My name is *<NAME>* #md # #md # - **Fortran 77 + PVM** : during my PhD 1998-2002 (Université du Havre) #md # #md # - **Fortran 90-2003 + OpenMP-MPI** : Engineer in Strasbourg (2003-2015) at IRMA #md # #md # - **Numpy + Cython, R + Rcpp** : Engineer in R...
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struct RKParam <: EoSParam a::PairParam{Float64} b::PairParam{Float64} Tc::SingleParam{Float64} Pc::SingleParam{Float64} Mw::SingleParam{Float64} Tbarc::Float64 # Not sure if we want to allow this end abstract type RKModel <: ABCubicModel end @newmodel RK RKModel RKParam export RK function RK(...
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@doc raw""" Spinor(α,β) Spinor(α,β) with Cayley-Klein parameters α and β. Based on "Introduction to the Shinnar-Le Roux algorithm", <NAME> (1995). A spinor is a way to represent 3D rotations, the underlying representation is a 2 X 2 complex unitary matrix (``\alpha,\beta\in\mathbb{C}``): ```math R=\left[\begin{ar...
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<filename>src/devices_models/devices/thermal_generation.jl #! format: off requires_initialization(::AbstractThermalFormulation) = false requires_initialization(::AbstractThermalUnitCommitment) = true requires_initialization(::ThermalStandardDispatch) = true requires_initialization(::ThermalBasicCompactUnitCommitment) ...
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__precompile__(true) module VectorField import Plots: quiver, quiver! import LinearAlgebra: adjoint export meshgrid, vectorfield, vectorfield! function meshgrid(x, y) x, y = float.(x), float.(y) [repeat(x, inner=length(y))'; repeat(y, outer=length(x))'] end function vectorfield(points, field::Function; arr...
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[RpcApi.SimpleOrganism(0x0000000000057cce,:(function (o::Creature.Organism,) function func_420(var_419::Int16=-11171) o.mem[var_419] = var_419 return var_419 end local var_413::Int8 = -128 function func_286(var_284::Int16=2081,var_285::Int64=9145930075523767031) ...
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function parse_rules(s) rules = Dict{String,Vector{Tuple{String,Int}}}() for line in readlines(IOBuffer(s)) outer, inners = split(line, " bags contain ") if startswith(inners, "no other bags.") continue end inners = string(inners) inners = replace(inners, r"(b...
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<gh_stars>0 ## Copyright (c) 2013 <NAME> ## ## This file is distributed under the 2-clause BSD License. module Gaston export closefigure, closeall, figure, plot, plot!, histogram, imagesc, surf, printfigure, set import Base.show # before doing anything else, verify gnuplot is present on this system tr...
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<reponame>EthanAnderes/VecchiaFactorization.jl module VecchiaFactorization import Base: size, getindex, permute!, invpermute!, parent, show, rand, randn using LinearAlgebra # BLAS.set_num_threads(1) import LinearAlgebra: mul!, lmul!, ldiv!, \, /, *, inv, pinv, adjoint, transpose, Matrix, sqrt, Hermitian, Symmetric, ...
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<reponame>eford/EchelleTools.jl const hpf_all_orders = 1:28 const hpf_flux_hdu = 2 const hpf_var_hdu = 5 const hpf_lambda_hdu = 8 const hpf_manifest_format = [ ManifestFormatEntry(:UTTimestamp,String, 4:26), ManifestFormatEntry(:UTDate,String, 30:37), ManifestFormatEn...
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<gh_stars>1-10 # Copyright (c) 2021, <NAME> # All rights reserved. # # Code provided under the license contained in the LICENSE file. # # This file depends upon the Sudoku module being defined first. using Test function block_permutations() p_reference = Array{Int16}(undef,(4,4)) #p_reference[:] = [1,2,3,4, 3...
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<filename>Chapter 6/Queues.jl module Queues export Queue, enqueue!, dequeue!, peek include("LinkedLists.jl") using .LinkedLists struct Queue{T} list::LinkedList{T} end Queue(t::Type{T}) where {T} = Queue{T}(LinkedList{T}()) Queue{T}() where {T} = Queue{T}(LinkedList{T}()) Queue() = Queue{Any}(LinkedList{Any}()) ...
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<reponame>FridljDa/IndependentHypothesisWeighting.jl StatsBase.@weights PriorityWeights const DirectlyWeighted = Union{Bonferroni,BenjaminiHochberg} #TODO: assumes weights sum to length(pvals) function adjust(pvals, ws::Union{PriorityWeights,UnitWeights}, method::DirectlyWeighted) weighted_pvals = copy(pvals) ...
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<reponame>Gawatz/ULE_MPS_Trajectories<filename>SSE/exampleSSErun.jl using Distributed using exactQmodule using Arpack using PauliStrings using MPOmodule using finiteMPS using FFTW #@everywhere using ProgressMeter @everywhere using DelimitedFiles @everywhere include("finiteTDVP_SSE.jl") # # get frequency bins # functio...
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using Test @testset "CombinatorialMaps" begin include("CombinatorialMaps.jl") end @testset "SimplicialSets" begin include("SimplicialSets.jl") end @testset "ExteriorCalculus" begin include("ExteriorCalculus.jl") include("DiscreteExteriorCalculus.jl") end @testset "Meshes" begin include("MeshInterop.jl") ...
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using MCMC println(" Testing basic EmpMCTuner constructors...") mctuners = [EmpMCTuner(0.85), EmpMCTuner(0.85, adaptStep=50), EmpMCTuner(0.85, maxStep=100), EmpMCTuner(0.85, targetPath=0.75), EmpMCTuner(0.85, verbose=true)] println(" Testing that EmpMCTuner tuners works with all samplers...") npars = ...
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<filename>src/datatablerow/utils.jl # Rows grouping. # Maps row contents to the indices of all the equal rows. # Used by groupby(), join(), nonunique() immutable RowGroupDict{T<:AbstractDataTable} "source data table" dt::T "number of groups" ngroups::Int "row hashes" rhashes::Vector{UInt} "h...
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# Biryani -- A conversion and validation toolbox # By: <NAME> <<EMAIL>> # # Copyright (C) 2015 <NAME> # https://github.com/eraviart/Biryani.jl # # This file is part of Biryani. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You ma...
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module mbObserve export Observer, observe, unobserve, notify type Observer D::Dict{Any, Vector{Function}} Observer() = new( Dict{Any, Vector{Function}}() ) end function observe(cb::Function, O::Observer, s) !haskey(O.D, s) && (O.D[s] = Function[]) push!(O.D[s], cb) return Void end function unobserve(cb::Functio...
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<filename>src/filters/threshold.jl """This filter returns the `match` result if the level in the `Event` is the same or more specific than the configured level and the onMismatch value otherwise. For example, if the `ThresholdFilter` is configured with `Level.ERROR` and the `Event` contains `Level.DEBUG` then the `mism...
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<reponame>andLaing/ATools<filename>src/raytracing.jl using StatsBase using LinearAlgebra """ Ray Represents a ray, characterised by a starting point (p), and a direction (d). From these, a unit vector, u can be computed. # Fields - `p::Vector{Float64}` : Starting point - `d::Vector{Float64}` : Direction vector - ...
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import ColorSchemes: viridis, inferno, twilight, deep, matter, ice, algae, balance, curl import Colors.hex function plotly_cs(colorscheme; n_entries=11) scale = LinRange(0, 1, n_entries) colors = [get(colorscheme, s) for s in scale] return [[s, hex(color)] for (s, color) in zip(scale, colors)] end functi...
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# The file test.mseed comes from an older IRIS libmseed, found by anowacki # It has a more complicated structure than the test.mseed file in more recent # versions of libmseed, which reads with no issues printstyled("SEED submodule\n", color=:light_green) using SeisIO.SEED printstyled(" info dump\n", color=:light_gre...
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<reponame>alisiahkoohi/InvertibleNetworks.jl # Conditional HINT network from Kruse et al. (2020) # Author: <NAME>, <EMAIL> # Date: January 2020 using InvertibleNetworks, LinearAlgebra, Test, Random Random.seed!(11) # Define network nx = 64 ny = 64 n_in = 2 n_hidden = 4 batchsize = 2 L = 2 K = 2 # Multi-scale and sin...
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<gh_stars>1-10 # AUTO GENERATED FILE - DO NOT EDIT export alert """ alert(;kwargs...) alert(children::Any;kwargs...) alert(children_maker::Function;kwargs...) An Alert component. Attract user attention with important static message. For more information, see: https://mantine.dev/core/alert/ Keyword argu...
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function penalty_α(α, pen_α) return - 0.5 * sum(α.*α) / pen_α^2 end function penalty_params(model, pen_params) return sum(sum([[penalize(model[j, k], pen_params[j][k]) for k in 1:size(model)[2]] for j in 1:size(model)[1]])) end # tmp = [[2. 1. 3. 1.], [2. 3. 4. 5.], [1. 2. 3. 4.]], # [[2. 1. 3. 1.], [2...
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<filename>src/alias_arrays.jl """ CartesianAxes Alias for LinearIndices where indices are subtypes of `AbstractAxis`. ## Examples ```jldoctest julia> using AxisIndices julia> cartaxes = CartesianAxes((Axis(2.0:5.0), Axis(1:4))); julia> cartinds = CartesianIndices((1:4, 1:4)); julia> cartaxes[2, 2] CartesianIn...
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using Kash using MinHash using Test using FASTX using BioSequences TESTPATH = joinpath(dirname(@__FILE__), "data", "test.fna") ## FastaIterator @testset "FastaIterator" begin function test_fastaiterator(one::FastaIterator{T}, two) where T # FastaIterators mutate their output, so must copy A = [cop...
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<reponame>jagot/Unwrap.jl using PyCall pygui(:qt) using PyPlot matplotlib[:rcdefaults]() ion() using Unwrap x = linspace(-1,1,200) y = x r² = broadcast(+, x.^2, (y').^2) z = exp(-r²) φ = angle(exp(im*z*10π)) φ_old = copy(φ) φ1 = unwrap2d(φ) φ2 = unwrap2d(φ1) # Iterating improves result function plot_map(args...;kwa...
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<filename>src/utils.jl function contraction_graph(As::ITensor...) N = length(As) # Make edges for the contracted indices edge_index_list = Dict{Tuple{Int, Int}, Vector{Index}}() for nodeᵢ in 1:N Aᵢ = As[nodeᵢ] for nodeⱼ in nodeᵢ:N if nodeᵢ ≠ nodeⱼ Aⱼ = As[nodeⱼ] for indAⱼ in inds...
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<gh_stars>1-10 using DifferentialEquations using Distributions using Plots using DelimitedFiles #----------------------------------- #specify the signaling topology #----------------------------------- topology = [0 1 1 0 0 1 0 0 0] nCell = size(topology, 1) #-------------------------------...
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var_count = 0 function variables(::Type{T}; n::Int = 1, unique::Bool = true) where {T} if unique global var_count += n varcnt = var_count else varcnt = n end if n == 1 return var(T, "ω$(varcnt)") end return [var(T, "ω$i") for i in varcnt-n+1:varcnt] end var(::Ty...
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# descriptor mutable struct DropoutDesc ptr::Ptr{Nothing} states::CuVector{UInt8} end Base.unsafe_convert(::Type{Ptr{Nothing}}, dd::DropoutDesc) = dd.ptr function DropoutDesc(ρ::Real; seed::Integer=0) d = [C_NULL] s = Csize_t[0] cudnnCreateDropoutDescriptor(d) cudnnDropoutGetStatesSize(handle(), s) sta...
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