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topology/logs/.ipynb_checkpoints/electra_cola_linear_paralle_v2l-checkpoint.log

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+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-15 21:09:58,401][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
+
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topology/logs/.ipynb_checkpoints/electra_cola_linear_parallel-checkpoint.log

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+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-15 21:06:47,446][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
+
+
+
+
+

topology/logs/.ipynb_checkpoints/roberta_cola_updated_src_linear_searcn-checkpoint.log

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+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-13 07:40:53,750][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
+
+

topology/logs/.ipynb_checkpoints/roberta_sst5_updated_src_linear_searcn-checkpoint.log

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+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-13 07:40:52,062][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-13 07:40:53,199][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-13 07:40:53,286][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
+
+

topology/logs/electra_cola_fast_topology_linear.log

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+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 21:44:07,975][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
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topology/logs/electra_cola_fast_topology_linear_2_layers.log

@@ -0,0 +1,8 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 23:13:46,381][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
+
+
+

topology/logs/electra_cola_fast_topology_linear_havier.log

@@ -0,0 +1,7 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 23:14:08,548][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
+
+

topology/logs/electra_cola_linear_paralle_v2l.log

@@ -0,0 +1,398 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-15 21:09:58,401][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
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topology/logs/electra_cola_linear_parallel.log

@@ -0,0 +1,10 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-15 21:06:47,446][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
+
+
+
+
+

topology/logs/electra_sst5_fast_topology_linear.log

@@ -0,0 +1,261 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 21:44:06,728][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-15 21:44:07,937][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-15 21:44:07,975][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
+
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topology/logs/electra_sst5_fast_topology_linear_2_layers.log

@@ -0,0 +1,9 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 23:13:44,250][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-15 23:13:45,840][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-15 23:13:45,890][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
+
+

topology/logs/electra_sst5_fast_topology_linear_havier.log

@@ -0,0 +1,9 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 23:14:07,535][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-15 23:14:08,871][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-15 23:14:08,945][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
+
+

topology/logs/electra_sst5_linear_paralle_v2l.log

@@ -0,0 +1,330 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-15 21:09:57,088][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-15 21:09:58,284][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-15 21:09:58,322][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
+
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+

topology/logs/electra_sst5_linear_parallel.log

@@ -0,0 +1,12 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-15 21:06:46,070][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-15 21:06:47,312][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-15 21:06:47,354][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
+
+
+
+
+

topology/logs/gated_s_only_cpu_catboost_sequential.log

@@ -0,0 +1,44 @@
+[start 2026-05-15 22:28:00 UTC] roberta_cola
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+Could not override 'catboost.thread_count'.
+To append to your config use +catboost.thread_count=2
+Key 'thread_count' is not in struct
+    full_key: catboost.thread_count
+    object_type=dict
+
+Set the environment variable HYDRA_FULL_ERROR=1 for a complete stack trace.
+[done 2026-05-15 22:28:08 UTC] roberta_cola status=0
+[start 2026-05-15 22:28:08 UTC] roberta_sst5
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+Could not override 'catboost.thread_count'.
+To append to your config use +catboost.thread_count=2
+Key 'thread_count' is not in struct
+    full_key: catboost.thread_count
+    object_type=dict
+
+Set the environment variable HYDRA_FULL_ERROR=1 for a complete stack trace.
+[done 2026-05-15 22:28:15 UTC] roberta_sst5 status=0
+[start 2026-05-15 22:28:15 UTC] electra_cola
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+Could not override 'catboost.thread_count'.
+To append to your config use +catboost.thread_count=2
+Key 'thread_count' is not in struct
+    full_key: catboost.thread_count
+    object_type=dict
+
+Set the environment variable HYDRA_FULL_ERROR=1 for a complete stack trace.
+[done 2026-05-15 22:28:21 UTC] electra_cola status=0
+[start 2026-05-15 22:28:21 UTC] electra_sst5
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+Could not override 'catboost.thread_count'.
+To append to your config use +catboost.thread_count=2
+Key 'thread_count' is not in struct
+    full_key: catboost.thread_count
+    object_type=dict
+
+Set the environment variable HYDRA_FULL_ERROR=1 for a complete stack trace.
+[done 2026-05-15 22:28:29 UTC] electra_sst5 status=0

topology/logs/roberta_cola_fast_topology_linear.log

@@ -0,0 +1,313 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 21:44:08,297][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
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topology/logs/roberta_cola_fast_topology_linear_2_layers.log

@@ -0,0 +1,9 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 23:13:46,043][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
+
+
+
+

topology/logs/roberta_cola_fast_topology_linear_havier.log

@@ -0,0 +1,5 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 23:14:09,156][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043

topology/logs/roberta_cola_linear_paralle_v2l.log

@@ -0,0 +1,403 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-15 21:09:58,688][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
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topology/logs/roberta_cola_linear_parallel.log

@@ -0,0 +1,11 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-15 21:06:48,112][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043
+
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+

topology/logs/roberta_sst5_fast_topology_linear.log

@@ -0,0 +1,266 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 21:44:06,623][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-15 21:44:07,795][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-15 21:44:07,887][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
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topology/logs/roberta_sst5_fast_topology_linear_2_layers.log

@@ -0,0 +1,11 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 23:13:44,151][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-15 23:13:45,816][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-15 23:13:45,915][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
+
+
+
+

topology/logs/roberta_sst5_fast_topology_linear_havier.log

@@ -0,0 +1,9 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                                                        
+
+[2026-05-15 23:14:07,308][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-15 23:14:08,870][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-15 23:14:08,977][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
+
+

topology/logs/roberta_sst5_linear_paralle_v2l.log

@@ -0,0 +1,343 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-15 21:09:57,189][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-15 21:09:58,581][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-15 21:09:58,678][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
+
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topology/logs/roberta_sst5_linear_parallel.log

@@ -0,0 +1,13 @@
+/venv/main/lib/python3.12/site-packages/torchmetrics/utilities/imports.py:23: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+  from pkg_resources import DistributionNotFound, get_distribution
+
                                                                                                                          
+
+[2026-05-15 21:06:46,122][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-15 21:06:47,319][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-15 21:06:47,410][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210
+
+
+
+
+
+

topology/logs/runs/2026-05-12_06-50-53_500b5856ec814d4b8fb9021adfc70d19/.hydra/config.yaml

@@ -0,0 +1,244 @@
+task:
+  target: misclassification
+  positive_label: error
+  primary_metric: roc_auc
+task_name: topology_steps
+seed: 1337
+base_architecture: google/electra-base-discriminator
+model_path: ${paths.root_dir}/data/full_models/electra_runs_seeds/CoLa/0
+output_dir: ${paths.output_dir}/topology_steps/electra_cola
+experiments:
+- E00
+- E01
+- E02
+- E03
+- E04
+- E05
+- E06
+- E07
+- E08
+- E09
+- E10
+- E11
+- E12
+- E13
+- E14
+- E15
+- E16
+- E17
+- E18
+- T1
+- T2
+- T3
+- T4
+- T5
+- X1
+- X2
+- X3
+- X4
+- X5
+- X6
+baselines:
+  allowed_only:
+  - msp
+  - entropy
+  msp_score: one_minus_msp
+  entropy_score: normalized_entropy
+training_sources:
+- train
+- train_validation
+bootstrap:
+  n_samples: 5
+  sample_fraction: 0.8
+inference:
+  batch_size: 8
+  device: cuda
+  torch_dtype: bfloat16
+  max_batches: null
+attention:
+  use_post_softmax_attention: true
+  remove_padding: true
+  keep_cls: true
+  keep_sep: true
+  symmetrization: max
+  distance: one_minus_weight
+  selected_layers:
+  - -1
+  layer_variants:
+  - name: small_last1
+    selected_layers:
+    - -1
+  head_mode: aggregate_all
+  aggregators:
+  - mean
+  - std
+  - max
+threshold_graph:
+  quantiles:
+  - 0.5
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  absolute_thresholds:
+  - 0.025
+  - 0.05
+  - 0.1
+  - 0.25
+  - 0.5
+  - 0.75
+patterns:
+  enabled:
+  - self
+  - previous
+  - next
+  - cls
+  - eos
+  - local_window
+  - uniform
+  local_radius: 2
+  distance: normalized_frobenius
+mst:
+  enabled_features:
+  - total_length_norm
+  - edge_mean
+  - edge_std
+  - edge_max
+  - cls_attachment
+  - cls_path_mean
+  - diameter
+  - leaf_ratio
+persistent_homology:
+  backend: mst_h0_and_graph_h1_proxy
+  maxdim: 1
+  max_death: 1.0
+  eps: 1.0e-12
+vectorized_ph:
+  grid_size: 16
+  features:
+  - betti_curve
+  - silhouette
+  silhouette_power: 1.0
+cross_head:
+  max_heads: 12
+  max_pairs: 120
+  pair_strategy: last_layer_all_pairs
+  paper_seed_pairs:
+  - - 11
+    - 11
+    - 11
+    - 8
+  - - 9
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 10
+  - - 10
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 6
+  - - 11
+    - 11
+    - 11
+    - 7
+  dims:
+  - 0
+  - 1
+  distances:
+  - lightweight_summary_distance
+  threshold_quantiles:
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  - 0.95
+cls_subgraph:
+  topk:
+  - 5
+  - 10
+  - 20
+order_bands:
+  bands:
+  - previous
+  - next
+  - local
+  - global
+  local_radius:
+  - 2
+  - 4
+catboost:
+  loss_function: Logloss
+  eval_metric: AUC
+  iterations: 3000
+  learning_rate: 0.015
+  depth: 2
+  l2_leaf_reg: 40.0
+  random_strength: 3.0
+  bagging_temperature: 1.5
+  auto_class_weights: Balanced
+  early_stopping_rounds: 150
+  verbose: false
+  allow_writing_files: false
+catboost_gpu:
+  enabled: false
+  devices: '0'
+feature_selection:
+  enabled_for_final: true
+  method: single_feature_roc_auc
+  max_features: 64
+  errors_per_feature: 5
+  min_single_feature_auc_power: 0.0
+  grid_search:
+    enabled: true
+    metric: roc_auc
+    methods:
+    - single_feature_roc_auc
+    - catboost_importance
+    max_features:
+    - 16
+    - 32
+    - 64
+    - 100
+    errors_per_feature:
+    - 1
+    - 2
+    - 5
+    min_single_feature_auc_power:
+    - 0.5
+    - 0.55
+    - 0.6
+metrics:
+  ece_bins: 10
+data:
+  _target_: src.data.text_module.TextDataModule
+  _recursive_: false
+  num_labels: 2
+  dataset:
+    _target_: src.dataset.sequence_classification.CoLa
+  batch_size: 8
+  num_workers: 0
+  pin_memory: false
+  collate_fn:
+    _target_: transformers.DataCollatorWithPadding
+    return_tensors: pt
+    padding: longest
+  tokenizer:
+    _target_: transformers.AutoTokenizer.from_pretrained
+    pretrained_model_name_or_path: ${base_architecture}
+paths:
+  root_dir: ${oc.env:PROJECT_ROOT}
+  data_dir: ${paths.root_dir}/data/
+  log_dir: ${paths.root_dir}/logs/
+  output_dir: ${hydra:runtime.output_dir}
+  work_dir: ${hydra:runtime.cwd}
+extras:
+  ignore_warnings: false
+  enforce_tags: false
+  print_config: false

topology/logs/runs/2026-05-12_06-50-53_500b5856ec814d4b8fb9021adfc70d19/.hydra/hydra.yaml

@@ -0,0 +1,171 @@
+hydra:
+  run:
+    dir: ${paths.log_dir}/${task_name}/runs/${now:%Y-%m-%d}_${now:%H-%M-%S}_${uuid:}
+  sweep:
+    dir: ${paths.log_dir}/${task_name}/multiruns/${now:%Y-%m-%d}_${now:%H-%M-%S}_${uuid:}
+    subdir: ${hydra.job.num}
+  launcher:
+    _target_: hydra._internal.core_plugins.basic_launcher.BasicLauncher
+  sweeper:
+    _target_: hydra._internal.core_plugins.basic_sweeper.BasicSweeper
+    max_batch_size: null
+    params: null
+  help:
+    app_name: ${hydra.job.name}
+    header: '${hydra.help.app_name} is powered by Hydra.
+
+      '
+    footer: 'Powered by Hydra (https://hydra.cc)
+
+      Use --hydra-help to view Hydra specific help
+
+      '
+    template: '${hydra.help.header}
+
+      == Configuration groups ==
+
+      Compose your configuration from those groups (group=option)
+
+
+      $APP_CONFIG_GROUPS
+
+
+      == Config ==
+
+      Override anything in the config (foo.bar=value)
+
+
+      $CONFIG
+
+
+      ${hydra.help.footer}
+
+      '
+  hydra_help:
+    template: 'Hydra (${hydra.runtime.version})
+
+      See https://hydra.cc for more info.
+
+
+      == Flags ==
+
+      $FLAGS_HELP
+
+
+      == Configuration groups ==
+
+      Compose your configuration from those groups (For example, append hydra/job_logging=disabled
+      to command line)
+
+
+      $HYDRA_CONFIG_GROUPS
+
+
+      Use ''--cfg hydra'' to Show the Hydra config.
+
+      '
+    hydra_help: ???
+  hydra_logging:
+    version: 1
+    formatters:
+      simple:
+        format: '[%(asctime)s][HYDRA] %(message)s'
+    handlers:
+      console:
+        class: logging.StreamHandler
+        formatter: simple
+        stream: ext://sys.stdout
+    root:
+      level: INFO
+      handlers:
+      - console
+    loggers:
+      logging_example:
+        level: DEBUG
+    disable_existing_loggers: false
+  job_logging:
+    version: 1
+    formatters:
+      simple:
+        format: '[%(asctime)s][%(name)s][%(levelname)s] - %(message)s'
+    handlers:
+      console:
+        class: logging.StreamHandler
+        formatter: simple
+        stream: ext://sys.stdout
+      file:
+        class: logging.FileHandler
+        formatter: simple
+        filename: ${hydra.runtime.output_dir}/${task_name}.log
+    root:
+      level: INFO
+      handlers:
+      - console
+      - file
+    disable_existing_loggers: false
+  env: {}
+  mode: RUN
+  searchpath: []
+  callbacks: {}
+  output_subdir: .hydra
+  overrides:
+    hydra:
+    - hydra.mode=RUN
+    task:
+    - experiment=topology_steps/electra_cola
+    - training_sources=[train,train_validation]
+    - attention.layer_variants=[{name:small_last1,selected_layers:[-1]}]
+    - inference.device=cuda
+    - inference.torch_dtype=bfloat16
+    - catboost_gpu.enabled=false
+    - bootstrap.n_samples=5
+    - bootstrap.sample_fraction=0.8
+    - extras.print_config=false
+  job:
+    name: run_attention_topology_steps
+    chdir: null
+    override_dirname: attention.layer_variants=[{name:small_last1,selected_layers:[-1]}],bootstrap.n_samples=5,bootstrap.sample_fraction=0.8,catboost_gpu.enabled=false,experiment=topology_steps/electra_cola,extras.print_config=false,inference.device=cuda,inference.torch_dtype=bfloat16,training_sources=[train,train_validation]
+    id: ???
+    num: ???
+    config_name: topology_steps.yaml
+    env_set: {}
+    env_copy: []
+    config:
+      override_dirname:
+        kv_sep: '='
+        item_sep: ','
+        exclude_keys: []
+  runtime:
+    version: 1.3.2
+    version_base: '1.3'
+    cwd: /workspace/AdUE
+    config_sources:
+    - path: hydra.conf
+      schema: pkg
+      provider: hydra
+    - path: /workspace/AdUE/configs
+      schema: file
+      provider: main
+    - path: hydra_plugins.hydra_colorlog.conf
+      schema: pkg
+      provider: hydra-colorlog
+    - path: ''
+      schema: structured
+      provider: schema
+    output_dir: /workspace/AdUE/logs/topology_steps/runs/2026-05-12_06-50-53_500b5856ec814d4b8fb9021adfc70d19
+    choices:
+      hydra: default
+      extras: default
+      paths: default
+      experiment: topology_steps/electra_cola
+      data: cola
+      hydra/env: default
+      hydra/callbacks: null
+      hydra/job_logging: default
+      hydra/hydra_logging: default
+      hydra/hydra_help: default
+      hydra/help: default
+      hydra/sweeper: basic
+      hydra/launcher: basic
+      hydra/output: default
+  verbose: false

topology/logs/runs/2026-05-12_06-50-53_500b5856ec814d4b8fb9021adfc70d19/.hydra/overrides.yaml

@@ -0,0 +1,9 @@
+- experiment=topology_steps/electra_cola
+- training_sources=[train,train_validation]
+- attention.layer_variants=[{name:small_last1,selected_layers:[-1]}]
+- inference.device=cuda
+- inference.torch_dtype=bfloat16
+- catboost_gpu.enabled=false
+- bootstrap.n_samples=5
+- bootstrap.sample_fraction=0.8
+- extras.print_config=false

topology/logs/runs/2026-05-12_06-50-53_500b5856ec814d4b8fb9021adfc70d19/topology_steps.log

@@ -0,0 +1,2 @@
+[2026-05-12 06:50:56,289][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-12 06:50:56,327][src.data.text_module][INFO] - [rank: 0] Train samples: 6840 Valid samples: 1711 Test samples: 1043

topology/logs/runs/2026-05-12_06-50-53_500b5856ec814d4b8fb9021adfc70d19/topology_steps/electra_cola/resolved_config.yaml

@@ -0,0 +1,244 @@
+task:
+  target: misclassification
+  positive_label: error
+  primary_metric: roc_auc
+task_name: topology_steps
+seed: 1337
+base_architecture: google/electra-base-discriminator
+model_path: /workspace/AdUE/data/full_models/electra_runs_seeds/CoLa/0
+output_dir: /workspace/AdUE/logs/topology_steps/runs/2026-05-12_06-50-53_500b5856ec814d4b8fb9021adfc70d19/topology_steps/electra_cola
+experiments:
+- E00
+- E01
+- E02
+- E03
+- E04
+- E05
+- E06
+- E07
+- E08
+- E09
+- E10
+- E11
+- E12
+- E13
+- E14
+- E15
+- E16
+- E17
+- E18
+- T1
+- T2
+- T3
+- T4
+- T5
+- X1
+- X2
+- X3
+- X4
+- X5
+- X6
+baselines:
+  allowed_only:
+  - msp
+  - entropy
+  msp_score: one_minus_msp
+  entropy_score: normalized_entropy
+training_sources:
+- train
+- train_validation
+bootstrap:
+  n_samples: 5
+  sample_fraction: 0.8
+inference:
+  batch_size: 8
+  device: cuda
+  torch_dtype: bfloat16
+  max_batches: null
+attention:
+  use_post_softmax_attention: true
+  remove_padding: true
+  keep_cls: true
+  keep_sep: true
+  symmetrization: max
+  distance: one_minus_weight
+  selected_layers:
+  - -1
+  layer_variants:
+  - name: small_last1
+    selected_layers:
+    - -1
+  head_mode: aggregate_all
+  aggregators:
+  - mean
+  - std
+  - max
+threshold_graph:
+  quantiles:
+  - 0.5
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  absolute_thresholds:
+  - 0.025
+  - 0.05
+  - 0.1
+  - 0.25
+  - 0.5
+  - 0.75
+patterns:
+  enabled:
+  - self
+  - previous
+  - next
+  - cls
+  - eos
+  - local_window
+  - uniform
+  local_radius: 2
+  distance: normalized_frobenius
+mst:
+  enabled_features:
+  - total_length_norm
+  - edge_mean
+  - edge_std
+  - edge_max
+  - cls_attachment
+  - cls_path_mean
+  - diameter
+  - leaf_ratio
+persistent_homology:
+  backend: mst_h0_and_graph_h1_proxy
+  maxdim: 1
+  max_death: 1.0
+  eps: 1.0e-12
+vectorized_ph:
+  grid_size: 16
+  features:
+  - betti_curve
+  - silhouette
+  silhouette_power: 1.0
+cross_head:
+  max_heads: 12
+  max_pairs: 120
+  pair_strategy: last_layer_all_pairs
+  paper_seed_pairs:
+  - - 11
+    - 11
+    - 11
+    - 8
+  - - 9
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 10
+  - - 10
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 6
+  - - 11
+    - 11
+    - 11
+    - 7
+  dims:
+  - 0
+  - 1
+  distances:
+  - lightweight_summary_distance
+  threshold_quantiles:
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  - 0.95
+cls_subgraph:
+  topk:
+  - 5
+  - 10
+  - 20
+order_bands:
+  bands:
+  - previous
+  - next
+  - local
+  - global
+  local_radius:
+  - 2
+  - 4
+catboost:
+  loss_function: Logloss
+  eval_metric: AUC
+  iterations: 3000
+  learning_rate: 0.015
+  depth: 2
+  l2_leaf_reg: 40.0
+  random_strength: 3.0
+  bagging_temperature: 1.5
+  auto_class_weights: Balanced
+  early_stopping_rounds: 150
+  verbose: false
+  allow_writing_files: false
+catboost_gpu:
+  enabled: false
+  devices: '0'
+feature_selection:
+  enabled_for_final: true
+  method: single_feature_roc_auc
+  max_features: 64
+  errors_per_feature: 5
+  min_single_feature_auc_power: 0.0
+  grid_search:
+    enabled: true
+    metric: roc_auc
+    methods:
+    - single_feature_roc_auc
+    - catboost_importance
+    max_features:
+    - 16
+    - 32
+    - 64
+    - 100
+    errors_per_feature:
+    - 1
+    - 2
+    - 5
+    min_single_feature_auc_power:
+    - 0.5
+    - 0.55
+    - 0.6
+metrics:
+  ece_bins: 10
+data:
+  _target_: src.data.text_module.TextDataModule
+  _recursive_: false
+  num_labels: 2
+  dataset:
+    _target_: src.dataset.sequence_classification.CoLa
+  batch_size: 8
+  num_workers: 0
+  pin_memory: false
+  collate_fn:
+    _target_: transformers.DataCollatorWithPadding
+    return_tensors: pt
+    padding: longest
+  tokenizer:
+    _target_: transformers.AutoTokenizer.from_pretrained
+    pretrained_model_name_or_path: google/electra-base-discriminator
+paths:
+  root_dir: /workspace/AdUE
+  data_dir: /workspace/AdUE/data/
+  log_dir: /workspace/AdUE/logs/
+  output_dir: /workspace/AdUE/logs/topology_steps/runs/2026-05-12_06-50-53_500b5856ec814d4b8fb9021adfc70d19
+  work_dir: /workspace/AdUE
+extras:
+  ignore_warnings: false
+  enforce_tags: false
+  print_config: false

topology/logs/runs/2026-05-12_06-50-53_d9fe1460f0ad4bfc9751f349227fdb3b/.hydra/config.yaml

@@ -0,0 +1,245 @@
+task:
+  target: misclassification
+  positive_label: error
+  primary_metric: roc_auc
+task_name: topology_steps
+seed: 1337
+base_architecture: google/electra-base-discriminator
+model_path: ${paths.root_dir}/data/full_models/electra_runs_seeds/SST5/0
+output_dir: ${paths.output_dir}/topology_steps/electra_sst5
+experiments:
+- E00
+- E01
+- E02
+- E03
+- E04
+- E05
+- E06
+- E07
+- E08
+- E09
+- E10
+- E11
+- E12
+- E13
+- E14
+- E15
+- E16
+- E17
+- E18
+- T1
+- T2
+- T3
+- T4
+- T5
+- X1
+- X2
+- X3
+- X4
+- X5
+- X6
+baselines:
+  allowed_only:
+  - msp
+  - entropy
+  msp_score: one_minus_msp
+  entropy_score: normalized_entropy
+training_sources:
+- train
+- train_validation
+bootstrap:
+  n_samples: 5
+  sample_fraction: 0.8
+inference:
+  batch_size: 8
+  device: cuda
+  torch_dtype: bfloat16
+  max_batches: null
+attention:
+  use_post_softmax_attention: true
+  remove_padding: true
+  keep_cls: true
+  keep_sep: true
+  symmetrization: max
+  distance: one_minus_weight
+  selected_layers:
+  - -1
+  layer_variants:
+  - name: small_last1
+    selected_layers:
+    - -1
+  head_mode: aggregate_all
+  aggregators:
+  - mean
+  - std
+  - max
+threshold_graph:
+  quantiles:
+  - 0.5
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  absolute_thresholds:
+  - 0.025
+  - 0.05
+  - 0.1
+  - 0.25
+  - 0.5
+  - 0.75
+patterns:
+  enabled:
+  - self
+  - previous
+  - next
+  - cls
+  - eos
+  - local_window
+  - uniform
+  local_radius: 2
+  distance: normalized_frobenius
+mst:
+  enabled_features:
+  - total_length_norm
+  - edge_mean
+  - edge_std
+  - edge_max
+  - cls_attachment
+  - cls_path_mean
+  - diameter
+  - leaf_ratio
+persistent_homology:
+  backend: mst_h0_and_graph_h1_proxy
+  maxdim: 1
+  max_death: 1.0
+  eps: 1.0e-12
+vectorized_ph:
+  grid_size: 16
+  features:
+  - betti_curve
+  - silhouette
+  silhouette_power: 1.0
+cross_head:
+  max_heads: 12
+  max_pairs: 120
+  pair_strategy: last_layer_all_pairs
+  paper_seed_pairs:
+  - - 11
+    - 11
+    - 11
+    - 8
+  - - 9
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 10
+  - - 10
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 6
+  - - 11
+    - 11
+    - 11
+    - 7
+  dims:
+  - 0
+  - 1
+  distances:
+  - lightweight_summary_distance
+  threshold_quantiles:
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  - 0.95
+cls_subgraph:
+  topk:
+  - 5
+  - 10
+  - 20
+order_bands:
+  bands:
+  - previous
+  - next
+  - local
+  - global
+  local_radius:
+  - 2
+  - 4
+catboost:
+  loss_function: Logloss
+  eval_metric: AUC
+  iterations: 3000
+  learning_rate: 0.015
+  depth: 2
+  l2_leaf_reg: 40.0
+  random_strength: 3.0
+  bagging_temperature: 1.5
+  auto_class_weights: Balanced
+  early_stopping_rounds: 150
+  verbose: false
+  allow_writing_files: false
+catboost_gpu:
+  enabled: false
+  devices: '0'
+feature_selection:
+  enabled_for_final: true
+  method: single_feature_roc_auc
+  max_features: 64
+  errors_per_feature: 5
+  min_single_feature_auc_power: 0.0
+  grid_search:
+    enabled: true
+    metric: roc_auc
+    methods:
+    - single_feature_roc_auc
+    - catboost_importance
+    max_features:
+    - 16
+    - 32
+    - 64
+    - 100
+    errors_per_feature:
+    - 1
+    - 2
+    - 5
+    min_single_feature_auc_power:
+    - 0.5
+    - 0.55
+    - 0.6
+metrics:
+  ece_bins: 10
+data:
+  _target_: src.data.text_module.TextDataModule
+  _recursive_: false
+  num_labels: 5
+  dataset:
+    _target_: src.dataset.sequence_classification.SST5
+  batch_size: 8
+  num_workers: 0
+  pin_memory: false
+  collate_fn:
+    _target_: transformers.DataCollatorWithPadding
+    return_tensors: pt
+    padding: longest
+    max_length: 512
+  tokenizer:
+    _target_: transformers.AutoTokenizer.from_pretrained
+    pretrained_model_name_or_path: ${base_architecture}
+paths:
+  root_dir: ${oc.env:PROJECT_ROOT}
+  data_dir: ${paths.root_dir}/data/
+  log_dir: ${paths.root_dir}/logs/
+  output_dir: ${hydra:runtime.output_dir}
+  work_dir: ${hydra:runtime.cwd}
+extras:
+  ignore_warnings: false
+  enforce_tags: false
+  print_config: false

topology/logs/runs/2026-05-12_06-50-53_d9fe1460f0ad4bfc9751f349227fdb3b/.hydra/hydra.yaml

@@ -0,0 +1,171 @@
+hydra:
+  run:
+    dir: ${paths.log_dir}/${task_name}/runs/${now:%Y-%m-%d}_${now:%H-%M-%S}_${uuid:}
+  sweep:
+    dir: ${paths.log_dir}/${task_name}/multiruns/${now:%Y-%m-%d}_${now:%H-%M-%S}_${uuid:}
+    subdir: ${hydra.job.num}
+  launcher:
+    _target_: hydra._internal.core_plugins.basic_launcher.BasicLauncher
+  sweeper:
+    _target_: hydra._internal.core_plugins.basic_sweeper.BasicSweeper
+    max_batch_size: null
+    params: null
+  help:
+    app_name: ${hydra.job.name}
+    header: '${hydra.help.app_name} is powered by Hydra.
+
+      '
+    footer: 'Powered by Hydra (https://hydra.cc)
+
+      Use --hydra-help to view Hydra specific help
+
+      '
+    template: '${hydra.help.header}
+
+      == Configuration groups ==
+
+      Compose your configuration from those groups (group=option)
+
+
+      $APP_CONFIG_GROUPS
+
+
+      == Config ==
+
+      Override anything in the config (foo.bar=value)
+
+
+      $CONFIG
+
+
+      ${hydra.help.footer}
+
+      '
+  hydra_help:
+    template: 'Hydra (${hydra.runtime.version})
+
+      See https://hydra.cc for more info.
+
+
+      == Flags ==
+
+      $FLAGS_HELP
+
+
+      == Configuration groups ==
+
+      Compose your configuration from those groups (For example, append hydra/job_logging=disabled
+      to command line)
+
+
+      $HYDRA_CONFIG_GROUPS
+
+
+      Use ''--cfg hydra'' to Show the Hydra config.
+
+      '
+    hydra_help: ???
+  hydra_logging:
+    version: 1
+    formatters:
+      simple:
+        format: '[%(asctime)s][HYDRA] %(message)s'
+    handlers:
+      console:
+        class: logging.StreamHandler
+        formatter: simple
+        stream: ext://sys.stdout
+    root:
+      level: INFO
+      handlers:
+      - console
+    loggers:
+      logging_example:
+        level: DEBUG
+    disable_existing_loggers: false
+  job_logging:
+    version: 1
+    formatters:
+      simple:
+        format: '[%(asctime)s][%(name)s][%(levelname)s] - %(message)s'
+    handlers:
+      console:
+        class: logging.StreamHandler
+        formatter: simple
+        stream: ext://sys.stdout
+      file:
+        class: logging.FileHandler
+        formatter: simple
+        filename: ${hydra.runtime.output_dir}/${task_name}.log
+    root:
+      level: INFO
+      handlers:
+      - console
+      - file
+    disable_existing_loggers: false
+  env: {}
+  mode: RUN
+  searchpath: []
+  callbacks: {}
+  output_subdir: .hydra
+  overrides:
+    hydra:
+    - hydra.mode=RUN
+    task:
+    - experiment=topology_steps/electra_sst5
+    - training_sources=[train,train_validation]
+    - attention.layer_variants=[{name:small_last1,selected_layers:[-1]}]
+    - inference.device=cuda
+    - inference.torch_dtype=bfloat16
+    - catboost_gpu.enabled=false
+    - bootstrap.n_samples=5
+    - bootstrap.sample_fraction=0.8
+    - extras.print_config=false
+  job:
+    name: run_attention_topology_steps
+    chdir: null
+    override_dirname: attention.layer_variants=[{name:small_last1,selected_layers:[-1]}],bootstrap.n_samples=5,bootstrap.sample_fraction=0.8,catboost_gpu.enabled=false,experiment=topology_steps/electra_sst5,extras.print_config=false,inference.device=cuda,inference.torch_dtype=bfloat16,training_sources=[train,train_validation]
+    id: ???
+    num: ???
+    config_name: topology_steps.yaml
+    env_set: {}
+    env_copy: []
+    config:
+      override_dirname:
+        kv_sep: '='
+        item_sep: ','
+        exclude_keys: []
+  runtime:
+    version: 1.3.2
+    version_base: '1.3'
+    cwd: /workspace/AdUE
+    config_sources:
+    - path: hydra.conf
+      schema: pkg
+      provider: hydra
+    - path: /workspace/AdUE/configs
+      schema: file
+      provider: main
+    - path: hydra_plugins.hydra_colorlog.conf
+      schema: pkg
+      provider: hydra-colorlog
+    - path: ''
+      schema: structured
+      provider: schema
+    output_dir: /workspace/AdUE/logs/topology_steps/runs/2026-05-12_06-50-53_d9fe1460f0ad4bfc9751f349227fdb3b
+    choices:
+      hydra: default
+      extras: default
+      paths: default
+      experiment: topology_steps/electra_sst5
+      data: sst5
+      hydra/env: default
+      hydra/callbacks: null
+      hydra/job_logging: default
+      hydra/hydra_logging: default
+      hydra/hydra_help: default
+      hydra/help: default
+      hydra/sweeper: basic
+      hydra/launcher: basic
+      hydra/output: default
+  verbose: false

topology/logs/runs/2026-05-12_06-50-53_d9fe1460f0ad4bfc9751f349227fdb3b/.hydra/overrides.yaml

@@ -0,0 +1,9 @@
+- experiment=topology_steps/electra_sst5
+- training_sources=[train,train_validation]
+- attention.layer_variants=[{name:small_last1,selected_layers:[-1]}]
+- inference.device=cuda
+- inference.torch_dtype=bfloat16
+- catboost_gpu.enabled=false
+- bootstrap.n_samples=5
+- bootstrap.sample_fraction=0.8
+- extras.print_config=false

topology/logs/runs/2026-05-12_06-50-53_d9fe1460f0ad4bfc9751f349227fdb3b/topology_steps.log

@@ -0,0 +1,3 @@
+[2026-05-12 06:50:54,751][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-12 06:50:56,212][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-12 06:50:56,257][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210

topology/logs/runs/2026-05-12_06-50-53_d9fe1460f0ad4bfc9751f349227fdb3b/topology_steps/electra_sst5/resolved_config.yaml

@@ -0,0 +1,245 @@
+task:
+  target: misclassification
+  positive_label: error
+  primary_metric: roc_auc
+task_name: topology_steps
+seed: 1337
+base_architecture: google/electra-base-discriminator
+model_path: /workspace/AdUE/data/full_models/electra_runs_seeds/SST5/0
+output_dir: /workspace/AdUE/logs/topology_steps/runs/2026-05-12_06-50-53_d9fe1460f0ad4bfc9751f349227fdb3b/topology_steps/electra_sst5
+experiments:
+- E00
+- E01
+- E02
+- E03
+- E04
+- E05
+- E06
+- E07
+- E08
+- E09
+- E10
+- E11
+- E12
+- E13
+- E14
+- E15
+- E16
+- E17
+- E18
+- T1
+- T2
+- T3
+- T4
+- T5
+- X1
+- X2
+- X3
+- X4
+- X5
+- X6
+baselines:
+  allowed_only:
+  - msp
+  - entropy
+  msp_score: one_minus_msp
+  entropy_score: normalized_entropy
+training_sources:
+- train
+- train_validation
+bootstrap:
+  n_samples: 5
+  sample_fraction: 0.8
+inference:
+  batch_size: 8
+  device: cuda
+  torch_dtype: bfloat16
+  max_batches: null
+attention:
+  use_post_softmax_attention: true
+  remove_padding: true
+  keep_cls: true
+  keep_sep: true
+  symmetrization: max
+  distance: one_minus_weight
+  selected_layers:
+  - -1
+  layer_variants:
+  - name: small_last1
+    selected_layers:
+    - -1
+  head_mode: aggregate_all
+  aggregators:
+  - mean
+  - std
+  - max
+threshold_graph:
+  quantiles:
+  - 0.5
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  absolute_thresholds:
+  - 0.025
+  - 0.05
+  - 0.1
+  - 0.25
+  - 0.5
+  - 0.75
+patterns:
+  enabled:
+  - self
+  - previous
+  - next
+  - cls
+  - eos
+  - local_window
+  - uniform
+  local_radius: 2
+  distance: normalized_frobenius
+mst:
+  enabled_features:
+  - total_length_norm
+  - edge_mean
+  - edge_std
+  - edge_max
+  - cls_attachment
+  - cls_path_mean
+  - diameter
+  - leaf_ratio
+persistent_homology:
+  backend: mst_h0_and_graph_h1_proxy
+  maxdim: 1
+  max_death: 1.0
+  eps: 1.0e-12
+vectorized_ph:
+  grid_size: 16
+  features:
+  - betti_curve
+  - silhouette
+  silhouette_power: 1.0
+cross_head:
+  max_heads: 12
+  max_pairs: 120
+  pair_strategy: last_layer_all_pairs
+  paper_seed_pairs:
+  - - 11
+    - 11
+    - 11
+    - 8
+  - - 9
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 10
+  - - 10
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 6
+  - - 11
+    - 11
+    - 11
+    - 7
+  dims:
+  - 0
+  - 1
+  distances:
+  - lightweight_summary_distance
+  threshold_quantiles:
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  - 0.95
+cls_subgraph:
+  topk:
+  - 5
+  - 10
+  - 20
+order_bands:
+  bands:
+  - previous
+  - next
+  - local
+  - global
+  local_radius:
+  - 2
+  - 4
+catboost:
+  loss_function: Logloss
+  eval_metric: AUC
+  iterations: 3000
+  learning_rate: 0.015
+  depth: 2
+  l2_leaf_reg: 40.0
+  random_strength: 3.0
+  bagging_temperature: 1.5
+  auto_class_weights: Balanced
+  early_stopping_rounds: 150
+  verbose: false
+  allow_writing_files: false
+catboost_gpu:
+  enabled: false
+  devices: '0'
+feature_selection:
+  enabled_for_final: true
+  method: single_feature_roc_auc
+  max_features: 64
+  errors_per_feature: 5
+  min_single_feature_auc_power: 0.0
+  grid_search:
+    enabled: true
+    metric: roc_auc
+    methods:
+    - single_feature_roc_auc
+    - catboost_importance
+    max_features:
+    - 16
+    - 32
+    - 64
+    - 100
+    errors_per_feature:
+    - 1
+    - 2
+    - 5
+    min_single_feature_auc_power:
+    - 0.5
+    - 0.55
+    - 0.6
+metrics:
+  ece_bins: 10
+data:
+  _target_: src.data.text_module.TextDataModule
+  _recursive_: false
+  num_labels: 5
+  dataset:
+    _target_: src.dataset.sequence_classification.SST5
+  batch_size: 8
+  num_workers: 0
+  pin_memory: false
+  collate_fn:
+    _target_: transformers.DataCollatorWithPadding
+    return_tensors: pt
+    padding: longest
+    max_length: 512
+  tokenizer:
+    _target_: transformers.AutoTokenizer.from_pretrained
+    pretrained_model_name_or_path: google/electra-base-discriminator
+paths:
+  root_dir: /workspace/AdUE
+  data_dir: /workspace/AdUE/data/
+  log_dir: /workspace/AdUE/logs/
+  output_dir: /workspace/AdUE/logs/topology_steps/runs/2026-05-12_06-50-53_d9fe1460f0ad4bfc9751f349227fdb3b
+  work_dir: /workspace/AdUE
+extras:
+  ignore_warnings: false
+  enforce_tags: false
+  print_config: false

topology/logs/runs/2026-05-12_06-50-53_de2f7f7e598d4ef7972edbf21c137bf6/.hydra/config.yaml

@@ -0,0 +1,245 @@
+task:
+  target: misclassification
+  positive_label: error
+  primary_metric: roc_auc
+task_name: topology_steps
+seed: 1337
+base_architecture: roberta-base
+model_path: ${paths.root_dir}/data/full_models/roberta_runs_seeds/SST5/0
+output_dir: ${paths.output_dir}/topology_steps/roberta_sst5
+experiments:
+- E00
+- E01
+- E02
+- E03
+- E04
+- E05
+- E06
+- E07
+- E08
+- E09
+- E10
+- E11
+- E12
+- E13
+- E14
+- E15
+- E16
+- E17
+- E18
+- T1
+- T2
+- T3
+- T4
+- T5
+- X1
+- X2
+- X3
+- X4
+- X5
+- X6
+baselines:
+  allowed_only:
+  - msp
+  - entropy
+  msp_score: one_minus_msp
+  entropy_score: normalized_entropy
+training_sources:
+- train
+- train_validation
+bootstrap:
+  n_samples: 5
+  sample_fraction: 0.8
+inference:
+  batch_size: 8
+  device: cuda
+  torch_dtype: bfloat16
+  max_batches: null
+attention:
+  use_post_softmax_attention: true
+  remove_padding: true
+  keep_cls: true
+  keep_sep: true
+  symmetrization: max
+  distance: one_minus_weight
+  selected_layers:
+  - -1
+  layer_variants:
+  - name: small_last1
+    selected_layers:
+    - -1
+  head_mode: aggregate_all
+  aggregators:
+  - mean
+  - std
+  - max
+threshold_graph:
+  quantiles:
+  - 0.5
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  absolute_thresholds:
+  - 0.025
+  - 0.05
+  - 0.1
+  - 0.25
+  - 0.5
+  - 0.75
+patterns:
+  enabled:
+  - self
+  - previous
+  - next
+  - cls
+  - eos
+  - local_window
+  - uniform
+  local_radius: 2
+  distance: normalized_frobenius
+mst:
+  enabled_features:
+  - total_length_norm
+  - edge_mean
+  - edge_std
+  - edge_max
+  - cls_attachment
+  - cls_path_mean
+  - diameter
+  - leaf_ratio
+persistent_homology:
+  backend: mst_h0_and_graph_h1_proxy
+  maxdim: 1
+  max_death: 1.0
+  eps: 1.0e-12
+vectorized_ph:
+  grid_size: 16
+  features:
+  - betti_curve
+  - silhouette
+  silhouette_power: 1.0
+cross_head:
+  max_heads: 12
+  max_pairs: 120
+  pair_strategy: last_layer_all_pairs
+  paper_seed_pairs:
+  - - 11
+    - 11
+    - 11
+    - 8
+  - - 9
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 10
+  - - 10
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 6
+  - - 11
+    - 11
+    - 11
+    - 7
+  dims:
+  - 0
+  - 1
+  distances:
+  - lightweight_summary_distance
+  threshold_quantiles:
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  - 0.95
+cls_subgraph:
+  topk:
+  - 5
+  - 10
+  - 20
+order_bands:
+  bands:
+  - previous
+  - next
+  - local
+  - global
+  local_radius:
+  - 2
+  - 4
+catboost:
+  loss_function: Logloss
+  eval_metric: AUC
+  iterations: 3000
+  learning_rate: 0.015
+  depth: 2
+  l2_leaf_reg: 40.0
+  random_strength: 3.0
+  bagging_temperature: 1.5
+  auto_class_weights: Balanced
+  early_stopping_rounds: 150
+  verbose: false
+  allow_writing_files: false
+catboost_gpu:
+  enabled: false
+  devices: '0'
+feature_selection:
+  enabled_for_final: true
+  method: single_feature_roc_auc
+  max_features: 64
+  errors_per_feature: 5
+  min_single_feature_auc_power: 0.0
+  grid_search:
+    enabled: true
+    metric: roc_auc
+    methods:
+    - single_feature_roc_auc
+    - catboost_importance
+    max_features:
+    - 16
+    - 32
+    - 64
+    - 100
+    errors_per_feature:
+    - 1
+    - 2
+    - 5
+    min_single_feature_auc_power:
+    - 0.5
+    - 0.55
+    - 0.6
+metrics:
+  ece_bins: 10
+data:
+  _target_: src.data.text_module.TextDataModule
+  _recursive_: false
+  num_labels: 5
+  dataset:
+    _target_: src.dataset.sequence_classification.SST5
+  batch_size: 8
+  num_workers: 0
+  pin_memory: false
+  collate_fn:
+    _target_: transformers.DataCollatorWithPadding
+    return_tensors: pt
+    padding: longest
+    max_length: 512
+  tokenizer:
+    _target_: transformers.AutoTokenizer.from_pretrained
+    pretrained_model_name_or_path: ${base_architecture}
+paths:
+  root_dir: ${oc.env:PROJECT_ROOT}
+  data_dir: ${paths.root_dir}/data/
+  log_dir: ${paths.root_dir}/logs/
+  output_dir: ${hydra:runtime.output_dir}
+  work_dir: ${hydra:runtime.cwd}
+extras:
+  ignore_warnings: false
+  enforce_tags: false
+  print_config: false

topology/logs/runs/2026-05-12_06-50-53_de2f7f7e598d4ef7972edbf21c137bf6/.hydra/hydra.yaml

@@ -0,0 +1,171 @@
+hydra:
+  run:
+    dir: ${paths.log_dir}/${task_name}/runs/${now:%Y-%m-%d}_${now:%H-%M-%S}_${uuid:}
+  sweep:
+    dir: ${paths.log_dir}/${task_name}/multiruns/${now:%Y-%m-%d}_${now:%H-%M-%S}_${uuid:}
+    subdir: ${hydra.job.num}
+  launcher:
+    _target_: hydra._internal.core_plugins.basic_launcher.BasicLauncher
+  sweeper:
+    _target_: hydra._internal.core_plugins.basic_sweeper.BasicSweeper
+    max_batch_size: null
+    params: null
+  help:
+    app_name: ${hydra.job.name}
+    header: '${hydra.help.app_name} is powered by Hydra.
+
+      '
+    footer: 'Powered by Hydra (https://hydra.cc)
+
+      Use --hydra-help to view Hydra specific help
+
+      '
+    template: '${hydra.help.header}
+
+      == Configuration groups ==
+
+      Compose your configuration from those groups (group=option)
+
+
+      $APP_CONFIG_GROUPS
+
+
+      == Config ==
+
+      Override anything in the config (foo.bar=value)
+
+
+      $CONFIG
+
+
+      ${hydra.help.footer}
+
+      '
+  hydra_help:
+    template: 'Hydra (${hydra.runtime.version})
+
+      See https://hydra.cc for more info.
+
+
+      == Flags ==
+
+      $FLAGS_HELP
+
+
+      == Configuration groups ==
+
+      Compose your configuration from those groups (For example, append hydra/job_logging=disabled
+      to command line)
+
+
+      $HYDRA_CONFIG_GROUPS
+
+
+      Use ''--cfg hydra'' to Show the Hydra config.
+
+      '
+    hydra_help: ???
+  hydra_logging:
+    version: 1
+    formatters:
+      simple:
+        format: '[%(asctime)s][HYDRA] %(message)s'
+    handlers:
+      console:
+        class: logging.StreamHandler
+        formatter: simple
+        stream: ext://sys.stdout
+    root:
+      level: INFO
+      handlers:
+      - console
+    loggers:
+      logging_example:
+        level: DEBUG
+    disable_existing_loggers: false
+  job_logging:
+    version: 1
+    formatters:
+      simple:
+        format: '[%(asctime)s][%(name)s][%(levelname)s] - %(message)s'
+    handlers:
+      console:
+        class: logging.StreamHandler
+        formatter: simple
+        stream: ext://sys.stdout
+      file:
+        class: logging.FileHandler
+        formatter: simple
+        filename: ${hydra.runtime.output_dir}/${task_name}.log
+    root:
+      level: INFO
+      handlers:
+      - console
+      - file
+    disable_existing_loggers: false
+  env: {}
+  mode: RUN
+  searchpath: []
+  callbacks: {}
+  output_subdir: .hydra
+  overrides:
+    hydra:
+    - hydra.mode=RUN
+    task:
+    - experiment=topology_steps/roberta_sst5
+    - training_sources=[train,train_validation]
+    - attention.layer_variants=[{name:small_last1,selected_layers:[-1]}]
+    - inference.device=cuda
+    - inference.torch_dtype=bfloat16
+    - catboost_gpu.enabled=false
+    - bootstrap.n_samples=5
+    - bootstrap.sample_fraction=0.8
+    - extras.print_config=false
+  job:
+    name: run_attention_topology_steps
+    chdir: null
+    override_dirname: attention.layer_variants=[{name:small_last1,selected_layers:[-1]}],bootstrap.n_samples=5,bootstrap.sample_fraction=0.8,catboost_gpu.enabled=false,experiment=topology_steps/roberta_sst5,extras.print_config=false,inference.device=cuda,inference.torch_dtype=bfloat16,training_sources=[train,train_validation]
+    id: ???
+    num: ???
+    config_name: topology_steps.yaml
+    env_set: {}
+    env_copy: []
+    config:
+      override_dirname:
+        kv_sep: '='
+        item_sep: ','
+        exclude_keys: []
+  runtime:
+    version: 1.3.2
+    version_base: '1.3'
+    cwd: /workspace/AdUE
+    config_sources:
+    - path: hydra.conf
+      schema: pkg
+      provider: hydra
+    - path: /workspace/AdUE/configs
+      schema: file
+      provider: main
+    - path: hydra_plugins.hydra_colorlog.conf
+      schema: pkg
+      provider: hydra-colorlog
+    - path: ''
+      schema: structured
+      provider: schema
+    output_dir: /workspace/AdUE/logs/topology_steps/runs/2026-05-12_06-50-53_de2f7f7e598d4ef7972edbf21c137bf6
+    choices:
+      hydra: default
+      extras: default
+      paths: default
+      experiment: topology_steps/roberta_sst5
+      data: sst5
+      hydra/env: default
+      hydra/callbacks: null
+      hydra/job_logging: default
+      hydra/hydra_logging: default
+      hydra/hydra_help: default
+      hydra/help: default
+      hydra/sweeper: basic
+      hydra/launcher: basic
+      hydra/output: default
+  verbose: false

topology/logs/runs/2026-05-12_06-50-53_de2f7f7e598d4ef7972edbf21c137bf6/.hydra/overrides.yaml

@@ -0,0 +1,9 @@
+- experiment=topology_steps/roberta_sst5
+- training_sources=[train,train_validation]
+- attention.layer_variants=[{name:small_last1,selected_layers:[-1]}]
+- inference.device=cuda
+- inference.torch_dtype=bfloat16
+- catboost_gpu.enabled=false
+- bootstrap.n_samples=5
+- bootstrap.sample_fraction=0.8
+- extras.print_config=false

topology/logs/runs/2026-05-12_06-50-53_de2f7f7e598d4ef7972edbf21c137bf6/topology_steps.log

@@ -0,0 +1,3 @@
+[2026-05-12 06:50:54,927][huggingface_hub.repocard][WARNING] - Repo card metadata block was not found. Setting CardData to empty.
+[2026-05-12 06:50:56,183][src.data.text_module][INFO] - [rank: 0] Dataset has train/test/valid split
+[2026-05-12 06:50:56,269][src.data.text_module][INFO] - [rank: 0] Train samples: 8544 Valid samples: 1101 Test samples: 2210

topology/logs/runs/2026-05-12_06-50-53_de2f7f7e598d4ef7972edbf21c137bf6/topology_steps/roberta_sst5/resolved_config.yaml

@@ -0,0 +1,245 @@
+task:
+  target: misclassification
+  positive_label: error
+  primary_metric: roc_auc
+task_name: topology_steps
+seed: 1337
+base_architecture: roberta-base
+model_path: /workspace/AdUE/data/full_models/roberta_runs_seeds/SST5/0
+output_dir: /workspace/AdUE/logs/topology_steps/runs/2026-05-12_06-50-53_de2f7f7e598d4ef7972edbf21c137bf6/topology_steps/roberta_sst5
+experiments:
+- E00
+- E01
+- E02
+- E03
+- E04
+- E05
+- E06
+- E07
+- E08
+- E09
+- E10
+- E11
+- E12
+- E13
+- E14
+- E15
+- E16
+- E17
+- E18
+- T1
+- T2
+- T3
+- T4
+- T5
+- X1
+- X2
+- X3
+- X4
+- X5
+- X6
+baselines:
+  allowed_only:
+  - msp
+  - entropy
+  msp_score: one_minus_msp
+  entropy_score: normalized_entropy
+training_sources:
+- train
+- train_validation
+bootstrap:
+  n_samples: 5
+  sample_fraction: 0.8
+inference:
+  batch_size: 8
+  device: cuda
+  torch_dtype: bfloat16
+  max_batches: null
+attention:
+  use_post_softmax_attention: true
+  remove_padding: true
+  keep_cls: true
+  keep_sep: true
+  symmetrization: max
+  distance: one_minus_weight
+  selected_layers:
+  - -1
+  layer_variants:
+  - name: small_last1
+    selected_layers:
+    - -1
+  head_mode: aggregate_all
+  aggregators:
+  - mean
+  - std
+  - max
+threshold_graph:
+  quantiles:
+  - 0.5
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  absolute_thresholds:
+  - 0.025
+  - 0.05
+  - 0.1
+  - 0.25
+  - 0.5
+  - 0.75
+patterns:
+  enabled:
+  - self
+  - previous
+  - next
+  - cls
+  - eos
+  - local_window
+  - uniform
+  local_radius: 2
+  distance: normalized_frobenius
+mst:
+  enabled_features:
+  - total_length_norm
+  - edge_mean
+  - edge_std
+  - edge_max
+  - cls_attachment
+  - cls_path_mean
+  - diameter
+  - leaf_ratio
+persistent_homology:
+  backend: mst_h0_and_graph_h1_proxy
+  maxdim: 1
+  max_death: 1.0
+  eps: 1.0e-12
+vectorized_ph:
+  grid_size: 16
+  features:
+  - betti_curve
+  - silhouette
+  silhouette_power: 1.0
+cross_head:
+  max_heads: 12
+  max_pairs: 120
+  pair_strategy: last_layer_all_pairs
+  paper_seed_pairs:
+  - - 11
+    - 11
+    - 11
+    - 8
+  - - 9
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 10
+  - - 10
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 6
+  - - 11
+    - 11
+    - 11
+    - 7
+  dims:
+  - 0
+  - 1
+  distances:
+  - lightweight_summary_distance
+  threshold_quantiles:
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  - 0.95
+cls_subgraph:
+  topk:
+  - 5
+  - 10
+  - 20
+order_bands:
+  bands:
+  - previous
+  - next
+  - local
+  - global
+  local_radius:
+  - 2
+  - 4
+catboost:
+  loss_function: Logloss
+  eval_metric: AUC
+  iterations: 3000
+  learning_rate: 0.015
+  depth: 2
+  l2_leaf_reg: 40.0
+  random_strength: 3.0
+  bagging_temperature: 1.5
+  auto_class_weights: Balanced
+  early_stopping_rounds: 150
+  verbose: false
+  allow_writing_files: false
+catboost_gpu:
+  enabled: false
+  devices: '0'
+feature_selection:
+  enabled_for_final: true
+  method: single_feature_roc_auc
+  max_features: 64
+  errors_per_feature: 5
+  min_single_feature_auc_power: 0.0
+  grid_search:
+    enabled: true
+    metric: roc_auc
+    methods:
+    - single_feature_roc_auc
+    - catboost_importance
+    max_features:
+    - 16
+    - 32
+    - 64
+    - 100
+    errors_per_feature:
+    - 1
+    - 2
+    - 5
+    min_single_feature_auc_power:
+    - 0.5
+    - 0.55
+    - 0.6
+metrics:
+  ece_bins: 10
+data:
+  _target_: src.data.text_module.TextDataModule
+  _recursive_: false
+  num_labels: 5
+  dataset:
+    _target_: src.dataset.sequence_classification.SST5
+  batch_size: 8
+  num_workers: 0
+  pin_memory: false
+  collate_fn:
+    _target_: transformers.DataCollatorWithPadding
+    return_tensors: pt
+    padding: longest
+    max_length: 512
+  tokenizer:
+    _target_: transformers.AutoTokenizer.from_pretrained
+    pretrained_model_name_or_path: roberta-base
+paths:
+  root_dir: /workspace/AdUE
+  data_dir: /workspace/AdUE/data/
+  log_dir: /workspace/AdUE/logs/
+  output_dir: /workspace/AdUE/logs/topology_steps/runs/2026-05-12_06-50-53_de2f7f7e598d4ef7972edbf21c137bf6
+  work_dir: /workspace/AdUE
+extras:
+  ignore_warnings: false
+  enforce_tags: false
+  print_config: false

topology/logs/runs/2026-05-12_06-50-54_02d50ccd2d6e4bb2b5c9386071d55359/.hydra/config.yaml

@@ -0,0 +1,244 @@
+task:
+  target: misclassification
+  positive_label: error
+  primary_metric: roc_auc
+task_name: topology_steps
+seed: 1337
+base_architecture: roberta-base
+model_path: ${paths.root_dir}/data/full_models/roberta_runs_seeds/CoLa/0
+output_dir: ${paths.output_dir}/topology_steps/roberta_cola
+experiments:
+- E00
+- E01
+- E02
+- E03
+- E04
+- E05
+- E06
+- E07
+- E08
+- E09
+- E10
+- E11
+- E12
+- E13
+- E14
+- E15
+- E16
+- E17
+- E18
+- T1
+- T2
+- T3
+- T4
+- T5
+- X1
+- X2
+- X3
+- X4
+- X5
+- X6
+baselines:
+  allowed_only:
+  - msp
+  - entropy
+  msp_score: one_minus_msp
+  entropy_score: normalized_entropy
+training_sources:
+- train
+- train_validation
+bootstrap:
+  n_samples: 5
+  sample_fraction: 0.8
+inference:
+  batch_size: 8
+  device: cuda
+  torch_dtype: bfloat16
+  max_batches: null
+attention:
+  use_post_softmax_attention: true
+  remove_padding: true
+  keep_cls: true
+  keep_sep: true
+  symmetrization: max
+  distance: one_minus_weight
+  selected_layers:
+  - -1
+  layer_variants:
+  - name: small_last1
+    selected_layers:
+    - -1
+  head_mode: aggregate_all
+  aggregators:
+  - mean
+  - std
+  - max
+threshold_graph:
+  quantiles:
+  - 0.5
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  absolute_thresholds:
+  - 0.025
+  - 0.05
+  - 0.1
+  - 0.25
+  - 0.5
+  - 0.75
+patterns:
+  enabled:
+  - self
+  - previous
+  - next
+  - cls
+  - eos
+  - local_window
+  - uniform
+  local_radius: 2
+  distance: normalized_frobenius
+mst:
+  enabled_features:
+  - total_length_norm
+  - edge_mean
+  - edge_std
+  - edge_max
+  - cls_attachment
+  - cls_path_mean
+  - diameter
+  - leaf_ratio
+persistent_homology:
+  backend: mst_h0_and_graph_h1_proxy
+  maxdim: 1
+  max_death: 1.0
+  eps: 1.0e-12
+vectorized_ph:
+  grid_size: 16
+  features:
+  - betti_curve
+  - silhouette
+  silhouette_power: 1.0
+cross_head:
+  max_heads: 12
+  max_pairs: 120
+  pair_strategy: last_layer_all_pairs
+  paper_seed_pairs:
+  - - 11
+    - 11
+    - 11
+    - 8
+  - - 9
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 10
+  - - 10
+    - 11
+    - 11
+    - 11
+  - - 11
+    - 11
+    - 11
+    - 6
+  - - 11
+    - 11
+    - 11
+    - 7
+  dims:
+  - 0
+  - 1
+  distances:
+  - lightweight_summary_distance
+  threshold_quantiles:
+  - 0.6
+  - 0.7
+  - 0.8
+  - 0.9
+  - 0.95
+cls_subgraph:
+  topk:
+  - 5
+  - 10
+  - 20
+order_bands:
+  bands:
+  - previous
+  - next
+  - local
+  - global
+  local_radius:
+  - 2
+  - 4
+catboost:
+  loss_function: Logloss
+  eval_metric: AUC
+  iterations: 3000
+  learning_rate: 0.015
+  depth: 2
+  l2_leaf_reg: 40.0
+  random_strength: 3.0
+  bagging_temperature: 1.5
+  auto_class_weights: Balanced
+  early_stopping_rounds: 150
+  verbose: false
+  allow_writing_files: false
+catboost_gpu:
+  enabled: false
+  devices: '0'
+feature_selection:
+  enabled_for_final: true
+  method: single_feature_roc_auc
+  max_features: 64
+  errors_per_feature: 5
+  min_single_feature_auc_power: 0.0
+  grid_search:
+    enabled: true
+    metric: roc_auc
+    methods:
+    - single_feature_roc_auc
+    - catboost_importance
+    max_features:
+    - 16
+    - 32
+    - 64
+    - 100
+    errors_per_feature:
+    - 1
+    - 2
+    - 5
+    min_single_feature_auc_power:
+    - 0.5
+    - 0.55
+    - 0.6
+metrics:
+  ece_bins: 10
+data:
+  _target_: src.data.text_module.TextDataModule
+  _recursive_: false
+  num_labels: 2
+  dataset:
+    _target_: src.dataset.sequence_classification.CoLa
+  batch_size: 8
+  num_workers: 0
+  pin_memory: false
+  collate_fn:
+    _target_: transformers.DataCollatorWithPadding
+    return_tensors: pt
+    padding: longest
+  tokenizer:
+    _target_: transformers.AutoTokenizer.from_pretrained
+    pretrained_model_name_or_path: ${base_architecture}
+paths:
+  root_dir: ${oc.env:PROJECT_ROOT}
+  data_dir: ${paths.root_dir}/data/
+  log_dir: ${paths.root_dir}/logs/
+  output_dir: ${hydra:runtime.output_dir}
+  work_dir: ${hydra:runtime.cwd}
+extras:
+  ignore_warnings: false
+  enforce_tags: false
+  print_config: false

topology/logs/runs/2026-05-12_06-50-54_02d50ccd2d6e4bb2b5c9386071d55359/.hydra/hydra.yaml

@@ -0,0 +1,171 @@
+hydra:
+  run:
+    dir: ${paths.log_dir}/${task_name}/runs/${now:%Y-%m-%d}_${now:%H-%M-%S}_${uuid:}
+  sweep:
+    dir: ${paths.log_dir}/${task_name}/multiruns/${now:%Y-%m-%d}_${now:%H-%M-%S}_${uuid:}
+    subdir: ${hydra.job.num}
+  launcher:
+    _target_: hydra._internal.core_plugins.basic_launcher.BasicLauncher
+  sweeper:
+    _target_: hydra._internal.core_plugins.basic_sweeper.BasicSweeper
+    max_batch_size: null
+    params: null
+  help:
+    app_name: ${hydra.job.name}
+    header: '${hydra.help.app_name} is powered by Hydra.
+
+      '
+    footer: 'Powered by Hydra (https://hydra.cc)
+
+      Use --hydra-help to view Hydra specific help
+
+      '
+    template: '${hydra.help.header}
+
+      == Configuration groups ==
+
+      Compose your configuration from those groups (group=option)
+
+
+      $APP_CONFIG_GROUPS
+
+
+      == Config ==
+
+      Override anything in the config (foo.bar=value)
+
+
+      $CONFIG
+
+
+      ${hydra.help.footer}
+
+      '
+  hydra_help:
+    template: 'Hydra (${hydra.runtime.version})
+
+      See https://hydra.cc for more info.
+
+
+      == Flags ==
+
+      $FLAGS_HELP
+
+
+      == Configuration groups ==
+
+      Compose your configuration from those groups (For example, append hydra/job_logging=disabled
+      to command line)
+
+
+      $HYDRA_CONFIG_GROUPS
+
+
+      Use ''--cfg hydra'' to Show the Hydra config.
+
+      '
+    hydra_help: ???
+  hydra_logging:
+    version: 1
+    formatters:
+      simple:
+        format: '[%(asctime)s][HYDRA] %(message)s'
+    handlers:
+      console:
+        class: logging.StreamHandler
+        formatter: simple
+        stream: ext://sys.stdout
+    root:
+      level: INFO
+      handlers:
+      - console
+    loggers:
+      logging_example:
+        level: DEBUG
+    disable_existing_loggers: false
+  job_logging:
+    version: 1
+    formatters:
+      simple:
+        format: '[%(asctime)s][%(name)s][%(levelname)s] - %(message)s'
+    handlers:
+      console:
+        class: logging.StreamHandler
+        formatter: simple
+        stream: ext://sys.stdout
+      file:
+        class: logging.FileHandler
+        formatter: simple
+        filename: ${hydra.runtime.output_dir}/${task_name}.log
+    root:
+      level: INFO
+      handlers:
+      - console
+      - file
+    disable_existing_loggers: false
+  env: {}
+  mode: RUN
+  searchpath: []
+  callbacks: {}
+  output_subdir: .hydra
+  overrides:
+    hydra:
+    - hydra.mode=RUN
+    task:
+    - experiment=topology_steps/roberta_cola
+    - training_sources=[train,train_validation]
+    - attention.layer_variants=[{name:small_last1,selected_layers:[-1]}]
+    - inference.device=cuda
+    - inference.torch_dtype=bfloat16
+    - catboost_gpu.enabled=false
+    - bootstrap.n_samples=5
+    - bootstrap.sample_fraction=0.8
+    - extras.print_config=false
+  job:
+    name: run_attention_topology_steps
+    chdir: null
+    override_dirname: attention.layer_variants=[{name:small_last1,selected_layers:[-1]}],bootstrap.n_samples=5,bootstrap.sample_fraction=0.8,catboost_gpu.enabled=false,experiment=topology_steps/roberta_cola,extras.print_config=false,inference.device=cuda,inference.torch_dtype=bfloat16,training_sources=[train,train_validation]
+    id: ???
+    num: ???
+    config_name: topology_steps.yaml
+    env_set: {}
+    env_copy: []
+    config:
+      override_dirname:
+        kv_sep: '='
+        item_sep: ','
+        exclude_keys: []
+  runtime:
+    version: 1.3.2
+    version_base: '1.3'
+    cwd: /workspace/AdUE
+    config_sources:
+    - path: hydra.conf
+      schema: pkg
+      provider: hydra
+    - path: /workspace/AdUE/configs
+      schema: file
+      provider: main
+    - path: hydra_plugins.hydra_colorlog.conf
+      schema: pkg
+      provider: hydra-colorlog
+    - path: ''
+      schema: structured
+      provider: schema
+    output_dir: /workspace/AdUE/logs/topology_steps/runs/2026-05-12_06-50-54_02d50ccd2d6e4bb2b5c9386071d55359
+    choices:
+      hydra: default
+      extras: default
+      paths: default
+      experiment: topology_steps/roberta_cola
+      data: cola
+      hydra/env: default
+      hydra/callbacks: null
+      hydra/job_logging: default
+      hydra/hydra_logging: default
+      hydra/hydra_help: default
+      hydra/help: default
+      hydra/sweeper: basic
+      hydra/launcher: basic
+      hydra/output: default
+  verbose: false