Bio_ClinicalBERT_fold_4_ternary_v1

This model is a fine-tuned version of emilyalsentzer/Bio_ClinicalBERT on the None dataset. It achieves the following results on the evaluation set:

  • Loss: 1.7349
  • F1: 0.8052

Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure

Training hyperparameters

The following hyperparameters were used during training:

  • learning_rate: 2e-05
  • train_batch_size: 16
  • eval_batch_size: 16
  • seed: 42
  • optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
  • lr_scheduler_type: linear
  • num_epochs: 25

Training results

Training Loss Epoch Step Validation Loss F1
No log 1.0 289 0.5378 0.7818
0.5561 2.0 578 0.4835 0.8002
0.5561 3.0 867 0.6401 0.7978
0.2473 4.0 1156 0.8665 0.7842
0.2473 5.0 1445 0.9942 0.7965
0.1002 6.0 1734 1.1535 0.8015
0.0428 7.0 2023 1.2619 0.8027
0.0428 8.0 2312 1.4386 0.7990
0.017 9.0 2601 1.4864 0.8039
0.017 10.0 2890 1.4817 0.8015
0.0145 11.0 3179 1.5205 0.8052
0.0145 12.0 3468 1.6825 0.7842
0.0115 13.0 3757 1.6670 0.7990
0.0083 14.0 4046 1.7283 0.7904
0.0083 15.0 4335 1.6552 0.8039
0.0071 16.0 4624 1.6760 0.8076
0.0071 17.0 4913 1.6973 0.7891
0.0109 18.0 5202 1.6050 0.8027
0.0109 19.0 5491 1.6379 0.8126
0.0037 20.0 5780 1.6936 0.8039
0.0013 21.0 6069 1.7187 0.8027
0.0013 22.0 6358 1.7839 0.7965
0.0015 23.0 6647 1.7551 0.8015
0.0015 24.0 6936 1.7312 0.8064
0.001 25.0 7225 1.7349 0.8052

Framework versions

  • Transformers 4.21.1
  • Pytorch 1.12.0+cu113
  • Datasets 2.4.0
  • Tokenizers 0.12.1
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