| cff-version: 1.2.0 | |
| message: "Please cite the associated manuscript for scientific findings and cite this repository for the recovered public implementation." | |
| title: "COSTE + DST-GNN Manuscript Code" | |
| type: software | |
| authors: | |
| - family-names: "Hu" | |
| given-names: "Taobo" | |
| - family-names: "Long" | |
| given-names: "Mengping" | |
| repository-code: "https://huggingface.co/hutaobo/ccst-spatial-clustering" | |
| license: "CC-BY-NC-4.0" | |
| keywords: | |
| - spatial omics | |
| - tissue architecture | |
| - graph neural network | |
| - temporal analysis | |
| abstract: "Cleaned public implementation of the manuscript-aligned DST-GNN analysis for temporal COSTE/SSS cell-type interaction graphs. The Hugging Face repository slug is historical and retained for continuity." | |
| preferred-citation: | |
| type: article | |
| title: "Cophenetic Spatial Topology Embedding reveals multiscale tissue architecture in spatial omics" | |
| authors: | |
| - family-names: "Long" | |
| given-names: "Mengping" | |
| - family-names: "Hu" | |
| given-names: "Taobo" | |
| - family-names: "Sountoulidis" | |
| given-names: "Alexandros" | |
| - family-names: "Samakovlis" | |
| given-names: "Christos" | |
| - family-names: "Nilsson" | |
| given-names: "Mats" | |
| note: "Biological conclusions and manuscript figures should be attributed to the manuscript. This repository contains the recovered public code implementation." | |