Sentence-BERT: Sentence Embeddings using Siamese BERT-Networks
Paper • 1908.10084 • Published • 15
How to use joduor/aibiosecure-policy-embeddings with sentence-transformers:
from sentence_transformers import SentenceTransformer
model = SentenceTransformer("joduor/aibiosecure-policy-embeddings")
sentences = [
"What is the standard for reporting laboratory incidents and near-misses?",
"Research proposals involving enhancement of pathogen transmissibility, virulence, or host range require institutional biosafety committee review prior to initiation.",
"AI risks and benefits from third-party resources are regularly monitored, and risk controls are applied and documented.",
"All laboratory incidents, including near-misses, shall be reported to the biosafety officer within 24 hours and documented in the incident register."
]
embeddings = model.encode(sentences)
similarities = model.similarity(embeddings, embeddings)
print(similarities.shape)
# [4, 4]This is a sentence-transformers model finetuned from sentence-transformers/all-MiniLM-L6-v2. It maps sentences & paragraphs to a 384-dimensional dense vector space and can be used for retrieval.
SentenceTransformer(
(0): Transformer({'transformer_task': 'feature-extraction', 'modality_config': {'text': {'method': 'forward', 'method_output_name': 'last_hidden_state'}}, 'module_output_name': 'token_embeddings', 'architecture': 'BertModel'})
(1): Pooling({'embedding_dimension': 384, 'pooling_mode': 'mean', 'include_prompt': True})
(2): Normalize({})
)
First install the Sentence Transformers library:
pip install -U sentence-transformers
Then you can load this model and run inference.
from sentence_transformers import SentenceTransformer
# Download from the 🤗 Hub
model = SentenceTransformer("joduor/aibiosecure-policy-embeddings")
# Run inference
sentences = [
'Find the control related to AI legal and regulatory requirement tracking.',
'Legal and regulatory requirements involving AI are understood, managed, and documented as part of organizational governance.',
'Suppliers of biological reagents and equipment shall be vetted for security risk, and orders for synthetic DNA shall be screened against sequences of concern.',
]
embeddings = model.encode(sentences)
print(embeddings.shape)
# [3, 384]
# Get the similarity scores for the embeddings
similarities = model.similarity(embeddings, embeddings)
print(similarities)
# tensor([[1.0000, 0.7547, 0.2401],
# [0.7547, 1.0000, 0.1990],
# [0.2401, 0.1990, 1.0000]])
policy-valEmbeddingSimilarityEvaluator| Metric | Value |
|---|---|
| pearson_cosine | nan |
| spearman_cosine | nan |
sentence_0 and sentence_1| sentence_0 | sentence_1 | |
|---|---|---|
| type | string | string |
| modality | text | text |
| details |
|
|
| sentence_0 | sentence_1 |
|---|---|
What does policy say about monitoring third-party AI risk? |
AI risks and benefits from third-party resources are regularly monitored, and risk controls are applied and documented. |
Which regulation addresses chain of custody in BSL-3 labs? |
Standard operating procedures for BSL-3 laboratories require documented chain of custody for all biological samples entering and leaving containment. |
Which regulation addresses documenting scientific integrity and validation context for AI? |
Scientific integrity and TEVV considerations are identified and documented for the AI system's intended context of use. |
MultipleNegativesRankingLoss with these parameters:{
"scale": 20.0,
"similarity_fct": "cos_sim",
"gather_across_devices": false,
"directions": [
"query_to_doc"
],
"partition_mode": "joint",
"hardness_mode": null,
"hardness_strength": 0.0
}
per_device_train_batch_size: 16num_train_epochs: 6per_device_eval_batch_size: 16multi_dataset_batch_sampler: round_robinper_device_train_batch_size: 16num_train_epochs: 6max_steps: -1learning_rate: 5e-05lr_scheduler_type: linearlr_scheduler_kwargs: Nonewarmup_steps: 0optim: adamw_torch_fusedoptim_args: Noneweight_decay: 0.0adam_beta1: 0.9adam_beta2: 0.999adam_epsilon: 1e-08optim_target_modules: Nonegradient_accumulation_steps: 1average_tokens_across_devices: Truemax_grad_norm: 1label_smoothing_factor: 0.0bf16: Falsefp16: Falsebf16_full_eval: Falsefp16_full_eval: Falsetf32: Nonegradient_checkpointing: Falsegradient_checkpointing_kwargs: Nonetorch_compile: Falsetorch_compile_backend: Nonetorch_compile_mode: Noneuse_liger_kernel: Falseliger_kernel_config: Noneuse_cache: Falseneftune_noise_alpha: Nonetorch_empty_cache_steps: Noneauto_find_batch_size: Falselog_on_each_node: Truelogging_nan_inf_filter: Trueinclude_num_input_tokens_seen: nolog_level: passivelog_level_replica: warningdisable_tqdm: Falseproject: huggingfacetrackio_space_id: Nonetrackio_bucket_id: Nonetrackio_static_space_id: Noneper_device_eval_batch_size: 16prediction_loss_only: Trueeval_on_start: Falseeval_do_concat_batches: Trueeval_use_gather_object: Falseeval_accumulation_steps: Noneinclude_for_metrics: []batch_eval_metrics: Falsesave_only_model: Falsesave_on_each_node: Falseenable_jit_checkpoint: Falsepush_to_hub: Falsehub_private_repo: Nonehub_model_id: Nonehub_strategy: every_savehub_always_push: Falsehub_revision: Noneload_best_model_at_end: Falseignore_data_skip: Falserestore_callback_states_from_checkpoint: Falsefull_determinism: Falseseed: 42data_seed: Noneuse_cpu: Falseaccelerator_config: {'split_batches': False, 'dispatch_batches': None, 'even_batches': True, 'use_seedable_sampler': True, 'non_blocking': False, 'gradient_accumulation_kwargs': None}parallelism_config: Nonedataloader_drop_last: Falsedataloader_num_workers: 0dataloader_pin_memory: Truedataloader_persistent_workers: Falsedataloader_prefetch_factor: Noneremove_unused_columns: Truelabel_names: Nonetrain_sampling_strategy: randomlength_column_name: lengthddp_find_unused_parameters: Noneddp_bucket_cap_mb: Noneddp_broadcast_buffers: Falseddp_static_graph: Noneddp_backend: Noneddp_timeout: 1800fsdp: Nonefsdp_config: Nonedeepspeed: Nonedebug: []skip_memory_metrics: Truedo_predict: Falseresume_from_checkpoint: Nonewarmup_ratio: Nonelocal_rank: -1prompts: Nonebatch_sampler: batch_samplermulti_dataset_batch_sampler: round_robinrouter_mapping: {}learning_rate_mapping: {}| Epoch | Step | policy-val_spearman_cosine |
|---|---|---|
| 1.0 | 4 | nan |
@inproceedings{reimers-2019-sentence-bert,
title = "Sentence-BERT: Sentence Embeddings using Siamese BERT-Networks",
author = "Reimers, Nils and Gurevych, Iryna",
booktitle = "Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing",
month = "11",
year = "2019",
publisher = "Association for Computational Linguistics",
url = "https://arxiv.org/abs/1908.10084",
}
@misc{oord2019representationlearningcontrastivepredictive,
title={Representation Learning with Contrastive Predictive Coding},
author={Aaron van den Oord and Yazhe Li and Oriol Vinyals},
year={2019},
eprint={1807.03748},
archivePrefix={arXiv},
primaryClass={cs.LG},
url={https://arxiv.org/abs/1807.03748},
}
Base model
nreimers/MiniLM-L6-H384-uncased