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khyeom
/
SVSTR-Score

Tabular Classification
Scikit-learn
Joblib
genomics
structural-variants
short-tandem-repeats
variant-calling
confidence-calibration
random-forest
Model card Files Files and versions
xet
Community
1

Instructions to use khyeom/SVSTR-Score with libraries, inference providers, notebooks, and local apps. Follow these links to get started.

  • Libraries
  • Scikit-learn

    How to use khyeom/SVSTR-Score with Scikit-learn:

    from huggingface_hub import hf_hub_download
    import joblib
    model = joblib.load(
    	hf_hub_download("khyeom/SVSTR-Score", "sklearn_model.joblib")
    )
    # only load pickle files from sources you trust
    # read more about it here https://skops.readthedocs.io/en/stable/persistence.html
  • Notebooks
  • Google Colab
  • Kaggle
SVSTR-Score / example
45.1 kB
Ctrl+K
Ctrl+K
  • 1 contributor
History: 3 commits
khyeom's picture
khyeom
Release v1.0: HPRC-trained 35/21-feature calibrated SV+STR models (#1)
3c7d0d1 9 days ago
  • str_features.tsv
    9.33 kB
    Release v1.0: HPRC-trained 35/21-feature calibrated SV+STR models (#1) 9 days ago
  • str_scored.tsv
    10.2 kB
    Release v1.0: HPRC-trained 35/21-feature calibrated SV+STR models (#1) 9 days ago
  • sv_features.tsv
    12.3 kB
    Release v1.0: HPRC-trained 35/21-feature calibrated SV+STR models (#1) 9 days ago
  • sv_scored.tsv
    13.2 kB
    Release v1.0: HPRC-trained 35/21-feature calibrated SV+STR models (#1) 9 days ago