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kouroshSA

Add ppiGPLM ROC/LES trajectory checkpoints (ckpt_250..8000 + final)

79bd350 verified about 1 month ago

ROC-Checkpoints
Add ppiGPLM ROC/LES trajectory checkpoints (ckpt_250..8000 + final) about 1 month ago
assets
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
checkpoints
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
config
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
data
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
.gitattributes
1.64 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
.gitignore
675 Bytes
gitignore: un-ignore ROC-Checkpoints/*.pt so trajectory ckpts can be tracked about 1 month ago
LES-wrapper.md
5.65 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
LES-wrapper.py
26.7 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
LICENSE
2.04 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
MED4-PPIs-low-confidence_ppiGPLM_prompts.csv
6.98 MB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
MED4_100_PRS.csv
52.2 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
MED4_100_RRS.csv
52.5 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
README.md
9.66 kB
Quick-start: document how to wire the downloaded ckpt into the inference script (model_dir + hardcoded ckpt.pt rename, configurator override, meta.pkl path) about 2 months ago
configurator.py
1.76 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
model.py
16.3 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
requirements.txt
138 Bytes
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
roc_analysis_color_threshold_F1e.py
7.79 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
sample_fasta3.3_softmax_error_handling3e.py
7.35 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago
train_.py
14.7 kB
Mirror of github.com/kouroshSA/ppiGPLM + MED4 ckpt_7e checkpoint and sidecar note about 2 months ago