CheXmask-U / README.md
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metadata
license: mit
datasets:
  - mcosarinsky/CheXmask-U
tags:
  - medical

CheXmask-U: Uncertainty-aware landmark-based anatomical segmentation for chest X-rays

๐Ÿ“„ Paper | ๐Ÿ’ป Code | ๐ŸŽ›๏ธ Interactive Demo | ๐Ÿ“ฆ Dataset


Model Description

CheXmask-U is a landmark-based chest X-ray segmentation model providing node-wise uncertainty estimation. It outputs:

  • Anatomical landmarks for lung and heart structures
  • Latent uncertainty from the learned variational latent space
  • Predictive uncertainty via stochastic output sampling

The model is implemented using a hybrid graph-convolutional architecture (HybridGNet), combining convolutional encoders with graph-based decoders. For full usage and code, see the GitHub repository.


Usage

from models.HybridGNet2IGSC import HybridGNetHF

device = "cuda"  # or "cpu"
model = HybridGNetHF.from_pretrained(
    "mcosarinsky/CheXmask-U",
    subfolder="v1_skip",
    device=device
)

# xray_image: tensor or suitable input
landmarks, _, _ = model(xray_image)

Citation

If you use this model, please cite:

@misc{cosarinsky2025chexmaskuquantifyinguncertaintylandmarkbased,
      title={CheXmask-U: Quantifying uncertainty in landmark-based anatomical segmentation for X-ray images}, 
      author={Matias Cosarinsky and Nicolas Gaggion and Rodrigo Echeveste and Enzo Ferrante},
      year={2025},
      eprint={2512.10715},
      archivePrefix={arXiv},
      primaryClass={cs.CV},
      url={https://arxiv.org/abs/2512.10715}, 
}