Instructions to use ncbi/Gene-R1-1B with libraries, inference providers, notebooks, and local apps. Follow these links to get started.

Libraries

How to use ncbi/Gene-R1-1B with Transformers:

# Use a pipeline as a high-level helper
from transformers import pipeline

pipe = pipeline("text-generation", model="ncbi/Gene-R1-1B")
messages = [
    {"role": "user", "content": "Who are you?"},
]
pipe(messages)

# Load model directly
from transformers import AutoTokenizer, AutoModelForCausalLM

tokenizer = AutoTokenizer.from_pretrained("ncbi/Gene-R1-1B")
model = AutoModelForCausalLM.from_pretrained("ncbi/Gene-R1-1B")
messages = [
    {"role": "user", "content": "Who are you?"},
]
inputs = tokenizer.apply_chat_template(
	messages,
	add_generation_prompt=True,
	tokenize=True,
	return_dict=True,
	return_tensors="pt",
).to(model.device)

outputs = model.generate(**inputs, max_new_tokens=40)
print(tokenizer.decode(outputs[0][inputs["input_ids"].shape[-1]:]))

Notebooks
Google Colab
Kaggle
Local Apps Settings

vLLM

How to use ncbi/Gene-R1-1B with vLLM:

Install from pip and serve model

# Install vLLM from pip:
pip install vllm
# Start the vLLM server:
vllm serve "ncbi/Gene-R1-1B"
# Call the server using curl (OpenAI-compatible API):
curl -X POST "http://localhost:8000/v1/chat/completions" \
	-H "Content-Type: application/json" \
	--data '{
		"model": "ncbi/Gene-R1-1B",
		"messages": [
			{
				"role": "user",
				"content": "What is the capital of France?"
			}
		]
	}'

Use Docker

docker model run hf.co/ncbi/Gene-R1-1B

SGLang

How to use ncbi/Gene-R1-1B with SGLang:

Install from pip and serve model

# Install SGLang from pip:
pip install sglang
# Start the SGLang server:
python3 -m sglang.launch_server \
    --model-path "ncbi/Gene-R1-1B" \
    --host 0.0.0.0 \
    --port 30000
# Call the server using curl (OpenAI-compatible API):
curl -X POST "http://localhost:30000/v1/chat/completions" \
	-H "Content-Type: application/json" \
	--data '{
		"model": "ncbi/Gene-R1-1B",
		"messages": [
			{
				"role": "user",
				"content": "What is the capital of France?"
			}
		]
	}'

Use Docker images

docker run --gpus all \
    --shm-size 32g \
    -p 30000:30000 \
    -v ~/.cache/huggingface:/root/.cache/huggingface \
    --env "HF_TOKEN=<secret>" \
    --ipc=host \
    lmsysorg/sglang:latest \
    python3 -m sglang.launch_server \
        --model-path "ncbi/Gene-R1-1B" \
        --host 0.0.0.0 \
        --port 30000
# Call the server using curl (OpenAI-compatible API):
curl -X POST "http://localhost:30000/v1/chat/completions" \
	-H "Content-Type: application/json" \
	--data '{
		"model": "ncbi/Gene-R1-1B",
		"messages": [
			{
				"role": "user",
				"content": "What is the capital of France?"
			}
		]
	}'

Docker Model Runner
How to use ncbi/Gene-R1-1B with Docker Model Runner:
```
docker model run hf.co/ncbi/Gene-R1-1B
```

Adding `safetensors` variant of this model

by SFconvertbot - opened 14 days ago

base: refs/heads/main

←

from: refs/pr/1

Discussion Files changed

-0

Files changed (1) hide show

model.safetensors +3 -0

model.safetensors ADDED Viewed

	@@ -0,0 +1,3 @@

+version https://git-lfs.github.com/spec/v1
+oid sha256:61a74467ac5a62c8b3a53dd027c559557027d5e30860dd88cf7fc63d8a3596a3
+size 4943274368