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neuralbioinfo
/
prokbert-mini

Fill-Mask
Transformers
Safetensors
prokbert
bioinformatics
genomics
sequence embedding
genomic language models
nucleotide
dna-sequence
promoter-prediction
phage
custom_code
Model card Files Files and versions
xet
Community
2

Instructions to use neuralbioinfo/prokbert-mini with libraries, inference providers, notebooks, and local apps. Follow these links to get started.

  • Libraries
  • Transformers

    How to use neuralbioinfo/prokbert-mini with Transformers:

    # Use a pipeline as a high-level helper
    from transformers import pipeline
    
    pipe = pipeline("fill-mask", model="neuralbioinfo/prokbert-mini", trust_remote_code=True)
    # Load model directly
    from transformers import AutoModelForMaskedLM
    model = AutoModelForMaskedLM.from_pretrained("neuralbioinfo/prokbert-mini", trust_remote_code=True, dtype="auto")
  • Notebooks
  • Google Colab
  • Kaggle
prokbert-mini
165 MB
Ctrl+K
Ctrl+K
  • 4 contributors
History: 24 commits
SFconvertbot's picture
SFconvertbot
Adding `safetensors` variant of this model
15fbadc verified over 1 year ago
  • .gitattributes
    1.57 kB
    ProkBERT mini almost 3 years ago
  • README.md
    15.5 kB
    Update README.md about 2 years ago
  • config.json
    602 Bytes
    Updating ProkBert class and adding LCA tokenizer config over 1 year ago
  • generation_config.json
    90 Bytes
    Updating ProkBert class and adding LCA tokenizer config over 1 year ago
  • model.safetensors
    82.6 MB
    xet
    Adding `safetensors` variant of this model over 1 year ago
  • pytorch_model.bin

    Detected Pickle imports (3)

    • "torch._utils._rebuild_tensor_v2",
    • "collections.OrderedDict",
    • "torch.FloatStorage"

    What is a pickle import?

    82.6 MB
    xet
    Updating ProkBert class and adding LCA tokenizer config over 1 year ago
  • special_tokens_map.json
    121 Bytes
    Tokenizer base almost 3 years ago
  • tokenizer_config.json
    284 Bytes
    Deleting autotokenizer over 1 year ago
  • vocab.txt
    28.7 kB
    Updating ProkBert class and adding LCA tokenizer config over 1 year ago